AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035314.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035314.01.T01 MTR_7g094460 61.446 498 60 7 1 415 1 449 0.0 550
MsG0680035314.01.T01 MTR_2g021300 55.532 470 99 6 2 415 21 436 1.19e-168 480
MsG0680035314.01.T01 MTR_3g076660 43.388 484 149 10 3 414 58 488 5.83e-110 332
MsG0680035314.01.T01 MTR_3g072130 39.848 394 83 11 45 415 49 311 6.24e-59 195
MsG0680035314.01.T01 MTR_4g014810 26.549 339 159 12 36 289 3 336 2.74e-22 99.0
MsG0680035314.01.T01 MTR_1g095703 26.254 339 160 12 36 289 3 336 1.97e-21 96.3
MsG0680035314.01.T01 MTR_1g495705 26.254 339 160 12 36 289 3 336 2.10e-21 96.3
MsG0680035314.01.T01 MTR_1g095650 26.254 339 160 12 36 289 3 336 2.10e-21 96.3
MsG0680035314.01.T01 MTR_6g021800 25.959 339 161 12 36 289 3 336 4.02e-21 95.5
MsG0680035314.01.T01 MTR_6g021805 25.959 339 161 12 36 289 3 336 4.02e-21 95.5
MsG0680035314.01.T01 MTR_1g013680 26.239 343 158 12 36 289 3 339 1.18e-20 94.0
MsG0680035314.01.T01 MTR_1g085410 26.582 316 144 11 36 268 3 313 2.08e-19 90.1
MsG0680035314.01.T01 MTR_2g080210 32.117 137 65 5 38 146 7 143 1.66e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035314.01.T01 AT4G02930 56.972 502 78 8 3 415 2 454 6.00e-178 504
MsG0680035314.01.T01 AT4G20360 43.064 483 153 9 1 414 46 475 6.24e-113 339
MsG0680035314.01.T01 AT4G20360 43.064 483 153 9 1 414 46 475 6.24e-113 339
MsG0680035314.01.T01 AT5G60390 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT5G60390 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT5G60390 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07920 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07940 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07940 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07940 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07940 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07930 26.254 339 160 12 36 289 3 336 2.50e-21 95.9
MsG0680035314.01.T01 AT1G07930 27.519 258 117 10 36 228 3 255 1.78e-16 80.9
MsG0680035314.01.T01 AT4G18330 27.703 296 153 15 3 241 4 295 4.52e-13 71.2
MsG0680035314.01.T01 AT2G18720 26.772 254 133 9 41 241 39 292 3.34e-12 68.6
MsG0680035314.01.T01 AT2G18720 26.772 254 133 9 41 241 39 292 3.34e-12 68.6

Find 86 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTGCAGAATATGATTAA+TGG 0.211513 6:-101998928 MsG0680035314.01.T01:intron
AATGCTGAACCTCTAATAAT+AGG 0.234602 6:+101997661 None:intergenic
GTTGCCAGAAAATGTTAAAA+TGG 0.264941 6:-101996290 MsG0680035314.01.T01:CDS
TGATGATGTATTCTCAATTC+AGG 0.299009 6:-101997515 MsG0680035314.01.T01:intron
CTCTACTGTTCCGGTTATAT+CGG 0.319577 6:+101996312 None:intergenic
AACTTCATCGTCAACTTTGA+TGG 0.326106 6:+101997077 None:intergenic
CGTCGGAACTATTGGACAAT+TGG 0.336961 6:-102000142 MsG0680035314.01.T01:CDS
TTCTGGCAACTCTACTGTTC+CGG 0.342685 6:+101996303 None:intergenic
CATGTTAACGTCGGAACTAT+TGG 0.343956 6:-102000150 MsG0680035314.01.T01:CDS
GGCTTATCAAGCTGGCGAAC+AGG 0.352910 6:+101997553 None:intergenic
TTAAGTATGAGACTGCTAAA+AGG 0.375152 6:-101999763 MsG0680035314.01.T01:CDS
ATGCTGAACCTCTAATAATA+GGG 0.381574 6:+101997662 None:intergenic
CGAACTCTTCTCTTATCTTC+AGG 0.383384 6:+101999897 None:intergenic
CTGAGCTTCTACAAGTTCCC+TGG 0.391801 6:-101997694 MsG0680035314.01.T01:CDS
CACACCTGCACCAACTGTTC+TGG 0.393750 6:+101995852 None:intergenic
GATGATATCCCTATTATTAG+AGG 0.399228 6:-101997670 MsG0680035314.01.T01:CDS
GTTTGAGGCATTGGTCCATC+TGG 0.420899 6:+101998865 None:intergenic
CAAGGTACAAATGAGGAGAT+TGG 0.421220 6:-101997628 MsG0680035314.01.T01:CDS
TGCAGACATTGAACGTGGTC+AGG 0.430041 6:-101996632 MsG0680035314.01.T01:intron
ATTTATTATGCACTTTATGC+TGG 0.431429 6:-101995943 MsG0680035314.01.T01:CDS
TCAAGCTGGCGAACAGGGTC+GGG 0.431449 6:+101997559 None:intergenic
AAAAGCATCTACGAAATTTG+AGG 0.443944 6:-101996422 MsG0680035314.01.T01:CDS
TTCTAGGTTCTTGCTGATGA+AGG 0.446135 6:-101999960 MsG0680035314.01.T01:intron
AATTGAGAATACATCATCAA+TGG 0.448110 6:+101997519 None:intergenic
TGACCTGGTTCAAGTGGAAC+AGG 0.451045 6:+101996223 None:intergenic
TTGAGGACTGCCGATATAAC+CGG 0.453481 6:-101996322 MsG0680035314.01.T01:CDS
GAGGAGTGTCCGTGCTTCAT+AGG 0.471327 6:-101995975 MsG0680035314.01.T01:CDS
GACACCGGGACACGCCTAAT+CGG 0.473294 6:-101995997 MsG0680035314.01.T01:CDS
TGAGCTTCTACAAGTTCCCT+GGG 0.486304 6:-101997693 MsG0680035314.01.T01:CDS
AATTGAGAGTAGAAGAGAAA+AGG 0.491479 6:+102000288 None:intergenic
ATCAAGCTGGCGAACAGGGT+CGG 0.493598 6:+101997558 None:intergenic
AAATGAGGAGATTGGAAGAA+AGG 0.499059 6:-101997620 MsG0680035314.01.T01:CDS
GTTTCAGATCACGGAGATGA+AGG 0.507634 6:+101996656 None:intergenic
TCAGCATTGTCTGCTTTACA+AGG 0.510440 6:-101997646 MsG0680035314.01.T01:CDS
ATTGAGAATACATCATCAAT+GGG 0.520245 6:+101997520 None:intergenic
TCATCAATGGGCATCAAGAA+AGG 0.523066 6:+101997532 None:intergenic
TTTCCTGTTCCACTTGAACC+AGG 0.525053 6:-101996226 MsG0680035314.01.T01:intron
GCACGGACACTCCTCCGATT+AGG 0.535109 6:+101995983 None:intergenic
TCAAGAAAGGCTTATCAAGC+TGG 0.539755 6:+101997545 None:intergenic
TCCTCCGATTAGGCGTGTCC+CGG 0.545485 6:+101995993 None:intergenic
TCTAGGTTCTTGCTGATGAA+GGG 0.545496 6:-101999959 MsG0680035314.01.T01:intron
ATATGTACTCACAAAGGATG+AGG 0.545850 6:-101996392 MsG0680035314.01.T01:CDS
GATTAGGCGTGTCCCGGTGT+CGG 0.548809 6:+101995999 None:intergenic
GGACGGGGAACGATTGCTGC+TGG 0.552517 6:-101997117 MsG0680035314.01.T01:CDS
AGATTTGGCTTGAGAGAGGA+TGG 0.556209 6:-101995877 MsG0680035314.01.T01:CDS
GCTTATCAAGCTGGCGAACA+GGG 0.562375 6:+101997554 None:intergenic
GATTAATGGAACTGCCCGCA+TGG 0.565780 6:-101998914 MsG0680035314.01.T01:CDS
TTGTAGGCCGGTGATTATGT+TGG 0.566411 6:-101996679 MsG0680035314.01.T01:intron
ATATACTGACCTGGTTCAAG+TGG 0.572693 6:+101996217 None:intergenic
ACAGCAGTAACATTGTCTAC+AGG 0.572982 6:+101996262 None:intergenic
AGTAGAAGAGAAAAGGTGAA+AGG 0.574219 6:+102000295 None:intergenic
TACTCACAAAGGATGAGGGT+GGG 0.581890 6:-101996387 MsG0680035314.01.T01:CDS
CTTGTTGTATCTGCACCAGA+TGG 0.582581 6:-101998880 MsG0680035314.01.T01:CDS
CGGACACAGTGTCCGACACC+GGG 0.587745 6:-101996011 MsG0680035314.01.T01:CDS
AAGGATACCGCAATCCATGC+GGG 0.588078 6:+101998900 None:intergenic
GCAAAGATTTGGCTTGAGAG+AGG 0.588269 6:-101995881 MsG0680035314.01.T01:CDS
GGTACCAGAACAGTTGGTGC+AGG 0.588748 6:-101995856 MsG0680035314.01.T01:CDS
GAGGATGGTACCAGAACAGT+TGG 0.589201 6:-101995862 MsG0680035314.01.T01:CDS
ACTTCAGTAGAATACCTACT+TGG 0.594908 6:+101998818 None:intergenic
ATAATAGGGATATCATCCCC+AGG 0.596623 6:+101997676 None:intergenic
ATAGACCTCAAGTTTGCTTG+AGG 0.597338 6:-101996339 MsG0680035314.01.T01:CDS
GGAACTGCCCGCATGGATTG+CGG 0.598271 6:-101998907 MsG0680035314.01.T01:CDS
TCGGACACAGTGTCCGACAC+CGG 0.599239 6:-101996012 MsG0680035314.01.T01:CDS
ATGAAGGCCAACATAATCAC+CGG 0.600107 6:+101996672 None:intergenic
ATTCGTCTAGCTCGCCAAGT+AGG 0.603590 6:-101998832 MsG0680035314.01.T01:intron
TGCTTTACAAGGTACAAATG+AGG 0.604944 6:-101997635 MsG0680035314.01.T01:CDS
TGTCTGCAAGTTTCAGATCA+CGG 0.611094 6:+101996647 None:intergenic
CAGAACAGTTGGTGCAGGTG+TGG 0.622477 6:-101995851 MsG0680035314.01.T01:CDS
ACCGGGACACGCCTAATCGG+AGG 0.635266 6:-101995994 MsG0680035314.01.T01:CDS
ACTATTGGACAATTGGATCA+CGG 0.635933 6:-102000135 MsG0680035314.01.T01:CDS
TGAACATAATCTACATGTCG+AGG 0.636388 6:+101999719 None:intergenic
TATGTACTCACAAAGGATGA+GGG 0.639988 6:-101996391 MsG0680035314.01.T01:CDS
CATCTGGTGCAGATACAACA+AGG 0.649537 6:+101998881 None:intergenic
TCACAAAGGATGAGGGTGGG+CGG 0.654793 6:-101996384 MsG0680035314.01.T01:CDS
GTGAGTTGACCTATGAAGCA+CGG 0.655260 6:+101995966 None:intergenic
GCTGCTGGTCGTGTTGAACA+AGG 0.655375 6:-101997102 MsG0680035314.01.T01:CDS
ATGCACTTTATGCTGGAGTG+TGG 0.658594 6:-101995936 MsG0680035314.01.T01:CDS
TAATAGGGATATCATCCCCA+GGG 0.660158 6:+101997677 None:intergenic
AGAGATATATGTACTCACAA+AGG 0.660869 6:-101996398 MsG0680035314.01.T01:CDS
GTACTCACAAAGGATGAGGG+TGG 0.668081 6:-101996388 MsG0680035314.01.T01:CDS
GCAGTCCTCAAGCAAACTTG+AGG 0.670994 6:+101996334 None:intergenic
CAAGGATACCGCAATCCATG+CGG 0.671399 6:+101998899 None:intergenic
AGAAAGCTTCATGTTAACGT+CGG 0.673671 6:-102000159 MsG0680035314.01.T01:CDS
GGGAACGAGTGAGAGAAGTG+TGG 0.686715 6:+102000265 None:intergenic
GAGCTTCTACAAGTTCCCTG+GGG 0.703912 6:-101997692 MsG0680035314.01.T01:CDS
AAACTTGCAGACATTGAACG+TGG 0.744494 6:-101996637 MsG0680035314.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGAATTAAAAAAAATAAAA+AGG - Chr6:101997008-101997027 MsG0680035314.01.T01:intron 10.0%
!!! AATAGTTATTTTAACAAATT+AGG - Chr6:101998365-101998384 MsG0680035314.01.T01:intron 10.0%
!!! AATTTGTTAAAATAACTATT+TGG + Chr6:101998365-101998384 None:intergenic 10.0%
!!! AGCAATTTTATAAAATATTT+TGG + Chr6:101997772-101997791 None:intergenic 10.0%
!!! ATAGTTATTTTAACAAATTA+GGG - Chr6:101998366-101998385 MsG0680035314.01.T01:intron 10.0%
!!! ATTTTATAAAATATTTTGGA+TGG + Chr6:101997768-101997787 None:intergenic 10.0%
!!! CTTTTTTCTTTTATATAAAA+GGG - Chr6:101999987-102000006 MsG0680035314.01.T01:intron 10.0%
!!! TTCAAAATTTTAAGATAAAA+AGG + Chr6:101998706-101998725 None:intergenic 10.0%
!! ACTATAATGGTTTAAATATT+AGG - Chr6:101997831-101997850 MsG0680035314.01.T01:intron 15.0%
!! ATATTAATATGTAGTTGTTA+CGG - Chr6:101999633-101999652 MsG0680035314.01.T01:intron 15.0%
!! ATGATTTCTCAAATTATTAA+CGG + Chr6:102000107-102000126 None:intergenic 15.0%
!! TATTTCCATTACATATTAAT+TGG + Chr6:101998080-101998099 None:intergenic 15.0%
!! TTAAAACAATGAAATATGAT+TGG - Chr6:101996609-101996628 MsG0680035314.01.T01:intron 15.0%
!!! AACATCCATTAATTTTAAAA+TGG + Chr6:101998585-101998604 None:intergenic 15.0%
!!! ATTAATGTTTTATTCTTGTT+TGG - Chr6:101999266-101999285 MsG0680035314.01.T01:intron 15.0%
!!! CCTTTTATATAAAAGAAAAA+AGG + Chr6:101999989-102000008 None:intergenic 15.0%
!!! CCTTTTTTCTTTTATATAAA+AGG - Chr6:101999986-102000005 MsG0680035314.01.T01:intron 15.0%
!!! GGATATTTAATTGATTTTAT+TGG - Chr6:101996364-101996383 MsG0680035314.01.T01:CDS 15.0%
!!! GTTTTTGTTAATTATCTATT+TGG - Chr6:101998454-101998473 MsG0680035314.01.T01:intron 15.0%
!!! TTAAACTAATATGATTTTGT+AGG - Chr6:101999484-101999503 MsG0680035314.01.T01:intron 15.0%
!!! TTTTAATTCCTTACATATTA+TGG + Chr6:101996999-101997018 None:intergenic 15.0%
!! AATATTTCAACTAAAATGGA+GGG - Chr6:101998327-101998346 MsG0680035314.01.T01:intron 20.0%
!! AATTCTAACCATAATATGTA+AGG - Chr6:101996988-101997007 MsG0680035314.01.T01:intron 20.0%
!! ACACATAAAAATTGATATAG+TGG - Chr6:101997881-101997900 MsG0680035314.01.T01:intron 20.0%
!! ATAAAATTGCTAAATCTTTG+TGG - Chr6:101997781-101997800 MsG0680035314.01.T01:intron 20.0%
!! ATATATAACCGAACATATTA+TGG - Chr6:101996771-101996790 MsG0680035314.01.T01:intron 20.0%
!! ATTTGGTATTAGGTTAATTA+AGG - Chr6:101996167-101996186 MsG0680035314.01.T01:intron 20.0%
!! CAACAATATTTCAACTAAAA+TGG - Chr6:101998323-101998342 MsG0680035314.01.T01:intron 20.0%
!! CTATTAAAATTGAAATGCAA+AGG - Chr6:101996936-101996955 MsG0680035314.01.T01:intron 20.0%
!! TCATGTTTAATACAAAAACA+TGG + Chr6:101997936-101997955 None:intergenic 20.0%
!! TGTATCAAAAAAATTGATGA+TGG + Chr6:101998208-101998227 None:intergenic 20.0%
!! TTATCTCAATAACAATAAGT+AGG + Chr6:101996821-101996840 None:intergenic 20.0%
!!! AAAGGCCATTTTAAAATTAA+TGG - Chr6:101998577-101998596 MsG0680035314.01.T01:intron 20.0%
!!! ACTTTGTATTGTTTTGAAAA+AGG - Chr6:101999712-101999731 MsG0680035314.01.T01:intron 20.0%
!!! ATAACCATTTTAACATTTTC+TGG + Chr6:101999896-101999915 None:intergenic 20.0%
!!! ATTGTTATTGAGATAAGAAT+CGG - Chr6:101996825-101996844 MsG0680035314.01.T01:intron 20.0%
!!! TAATTGATTTTATTGGTTGA+TGG - Chr6:101996371-101996390 MsG0680035314.01.T01:CDS 20.0%
!!! TATTTTAACAAATTAGGGTT+GGG - Chr6:101998371-101998390 MsG0680035314.01.T01:intron 20.0%
!!! TTAGTTATTTTTTTAAGGGA+CGG - Chr6:101999045-101999064 MsG0680035314.01.T01:intron 20.0%
!!! TTATTTTAACAAATTAGGGT+TGG - Chr6:101998370-101998389 MsG0680035314.01.T01:intron 20.0%
!!! TTCTCTTCAATTTTAGAAAT+GGG - Chr6:101995963-101995982 MsG0680035314.01.T01:CDS 20.0%
!!! TTGCATTTCAATTTTAATAG+CGG + Chr6:101996936-101996955 None:intergenic 20.0%
!!! TTTCTCTTCAATTTTAGAAA+TGG - Chr6:101995962-101995981 MsG0680035314.01.T01:CDS 20.0%
!!! TTTTTGTTGATTGATTTATC+TGG - Chr6:101996343-101996362 MsG0680035314.01.T01:CDS 20.0%
!!! TTTTTTGACATACTAGAAAT+AGG - Chr6:101996542-101996561 MsG0680035314.01.T01:intron 20.0%
! AATTGAGAATACATCATCAA+TGG + Chr6:101998663-101998682 None:intergenic 25.0%
! ACAATACAAAGTTAGTAAAG+TGG + Chr6:101999704-101999723 None:intergenic 25.0%
! ACCAAGACTTATGAAATAAA+AGG - Chr6:101998021-101998040 MsG0680035314.01.T01:intron 25.0%
! ACCTCATCAAATATTGTTTA+TGG + Chr6:101997178-101997197 None:intergenic 25.0%
! AGTGAAATGAAATGAAGATT+TGG - Chr6:101996150-101996169 MsG0680035314.01.T01:intron 25.0%
! ATAAATTCCTTGCATTCTAA+CGG - Chr6:101999318-101999337 MsG0680035314.01.T01:intron 25.0%
! ATAGTCATTTAAGTCAATCA+AGG - Chr6:101998156-101998175 MsG0680035314.01.T01:intron 25.0%
! ATATGATACCTTGAAAAACA+TGG - Chr6:101998871-101998890 MsG0680035314.01.T01:CDS 25.0%
! ATCTCTCAATATGAAGATAA+CGG + Chr6:101999448-101999467 None:intergenic 25.0%
! ATGTAGATTATGTTCAAGTA+AGG - Chr6:101996467-101996486 MsG0680035314.01.T01:intron 25.0%
! ATTCATTCTTATCATGAACA+AGG + Chr6:101997610-101997629 None:intergenic 25.0%
! ATTGAGAATACATCATCAAT+GGG + Chr6:101998662-101998681 None:intergenic 25.0%
! ATTTATTATGCACTTTATGC+TGG - Chr6:102000236-102000255 MsG0680035314.01.T01:intron 25.0%
! CAATATTTCAACTAAAATGG+AGG - Chr6:101998326-101998345 MsG0680035314.01.T01:intron 25.0%
! TAACATCCAAACGAATAAAT+CGG + Chr6:101996118-101996137 None:intergenic 25.0%
! TACACTTTGTAATTGTACAA+AGG + Chr6:101998001-101998020 None:intergenic 25.0%
! TACTGTAAGAATACAATATC+CGG + Chr6:101998759-101998778 None:intergenic 25.0%
! TCAATAACAATAAGTAGGAT+CGG + Chr6:101996816-101996835 None:intergenic 25.0%
! TCATGAACAAGGAAAAAATT+AGG + Chr6:101997599-101997618 None:intergenic 25.0%
! TCGTATTTATTTCAATGAGT+TGG + Chr6:101998734-101998753 None:intergenic 25.0%
! TTTATATAAAAGGGACAAGA+AGG - Chr6:101999996-102000015 MsG0680035314.01.T01:intron 25.0%
!! AACGATAATTGCAAACTTTT+AGG - Chr6:101997393-101997412 MsG0680035314.01.T01:intron 25.0%
!! AGCTTTTGATGAAATTGATA+GGG - Chr6:101996257-101996276 MsG0680035314.01.T01:CDS 25.0%
!! ATATTGTTGCTTCCAAATAA+TGG + Chr6:101998312-101998331 None:intergenic 25.0%
!! GATCTAGTTTAACAAATACA+AGG + Chr6:101997653-101997672 None:intergenic 25.0%
!! TAGCTTTTGATGAAATTGAT+AGG - Chr6:101996256-101996275 MsG0680035314.01.T01:CDS 25.0%
!! TATTGTTGCTTCCAAATAAT+GGG + Chr6:101998311-101998330 None:intergenic 25.0%
!! TGAAATGAAGATTTGGTATT+AGG - Chr6:101996157-101996176 MsG0680035314.01.T01:intron 25.0%
!! TTCTATATTTTATCTGCTGT+TGG - Chr6:101999238-101999257 MsG0680035314.01.T01:intron 25.0%
!!! AGATAGATAGATTTTGAAGT+TGG - Chr6:101998432-101998451 MsG0680035314.01.T01:intron 25.0%
!!! ATGTTGATTGATTTGATTCT+AGG - Chr6:101996203-101996222 MsG0680035314.01.T01:intron 25.0%
!!! ATTTCAATTTTAATAGCGGA+TGG + Chr6:101996932-101996951 None:intergenic 25.0%
!!! ATTTTAACAAATTAGGGTTG+GGG - Chr6:101998372-101998391 MsG0680035314.01.T01:intron 25.0%
!!! CTAATTAATTAGCTTTCAGA+AGG - Chr6:101996670-101996689 MsG0680035314.01.T01:CDS 25.0%
!!! GCTTGTTATTTGATTTTACA+GGG - Chr6:102000276-102000295 MsG0680035314.01.T01:CDS 25.0%
!!! TAGTTATTTTTTTAAGGGAC+GGG - Chr6:101999046-101999065 MsG0680035314.01.T01:intron 25.0%
!!! TGCTTGTTATTTGATTTTAC+AGG - Chr6:102000275-102000294 MsG0680035314.01.T01:CDS 25.0%
!!! TTTTATTCTTGTTTGGACAT+TGG - Chr6:101999273-101999292 MsG0680035314.01.T01:intron 25.0%
AAAAAAGGAATATACTGACC+TGG + Chr6:101999974-101999993 None:intergenic 30.0%
AAACGACACCATAATATGTT+CGG + Chr6:101996782-101996801 None:intergenic 30.0%
AAATTATATAAACTCCTGCG+CGG + Chr6:101997681-101997700 None:intergenic 30.0%
AATGCTGAACCTCTAATAAT+AGG + Chr6:101998521-101998540 None:intergenic 30.0%
AATTGAGAGTAGAAGAGAAA+AGG + Chr6:101995894-101995913 None:intergenic 30.0%
ACTGTAAGAATACAATATCC+GGG + Chr6:101998758-101998777 None:intergenic 30.0%
AGAGATATATGTACTCACAA+AGG - Chr6:101999781-101999800 MsG0680035314.01.T01:intron 30.0%
AGCAAGAAGATTTCGTATAA+AGG - Chr6:101999410-101999429 MsG0680035314.01.T01:intron 30.0%
ATGCTGAACCTCTAATAATA+GGG + Chr6:101998520-101998539 None:intergenic 30.0%
ATTAAGGCGTAATACTAAAG+CGG + Chr6:101997092-101997111 None:intergenic 30.0%
ATTTCTCCGATTTATTCGTT+TGG - Chr6:101996109-101996128 MsG0680035314.01.T01:intron 30.0%
CAAATATAGAAACATCCAGT+AGG + Chr6:101997117-101997136 None:intergenic 30.0%
CAATATGCAAGATGAAATCA+AGG + Chr6:101998963-101998982 None:intergenic 30.0%
CAATTCAGGTAAAAGGTTAT+GGG - Chr6:101998678-101998697 MsG0680035314.01.T01:intron 30.0%
CATCAAATATTGTTTATGGC+TGG + Chr6:101997174-101997193 None:intergenic 30.0%
CATTTAAGTCAATCAAGGTT+GGG - Chr6:101998161-101998180 MsG0680035314.01.T01:intron 30.0%
GAACAAGGAAAAAATTAGGA+AGG + Chr6:101997595-101997614 None:intergenic 30.0%
GAGAAATCAAATACTTACTC+TGG + Chr6:101996096-101996115 None:intergenic 30.0%
GATGATATCCCTATTATTAG+AGG - Chr6:101998509-101998528 MsG0680035314.01.T01:intron 30.0%
GCATGCCAATTAATATGTAA+TGG - Chr6:101998072-101998091 MsG0680035314.01.T01:intron 30.0%
GCCATAAACAATATTTGATG+AGG - Chr6:101997174-101997193 MsG0680035314.01.T01:intron 30.0%
GCTTTGCAGAATATGATTAA+TGG - Chr6:101997251-101997270 MsG0680035314.01.T01:intron 30.0%
GTATCATATCCAACTGAAAT+TGG + Chr6:101998860-101998879 None:intergenic 30.0%
GTATTCTCAATTCAGGTAAA+AGG - Chr6:101998671-101998690 MsG0680035314.01.T01:intron 30.0%
GTTGCCAGAAAATGTTAAAA+TGG - Chr6:101999889-101999908 MsG0680035314.01.T01:intron 30.0%
TACATATTAATTGGCATGCA+TGG + Chr6:101998071-101998090 None:intergenic 30.0%
TAGAAGAAGAAGAAGAGTTT+CGG + Chr6:101995854-101995873 None:intergenic 30.0%
TAGAGAGAATATGTTACGTT+CGG + Chr6:101995938-101995957 None:intergenic 30.0%
TAGGTTGTAAGAAGTGAAAT+AGG - Chr6:101996561-101996580 MsG0680035314.01.T01:intron 30.0%
TCAATTCAGGTAAAAGGTTA+TGG - Chr6:101998677-101998696 MsG0680035314.01.T01:intron 30.0%
TCATTTAAGTCAATCAAGGT+TGG - Chr6:101998160-101998179 MsG0680035314.01.T01:intron 30.0%
TCTCAAATTATTAACGGTGA+CGG + Chr6:102000101-102000120 None:intergenic 30.0%
TTAAGTATGAGACTGCTAAA+AGG - Chr6:101996416-101996435 MsG0680035314.01.T01:CDS 30.0%
TTCAGTGCAATTATATGTGT+CGG - Chr6:102000131-102000150 MsG0680035314.01.T01:CDS 30.0%
! ACTAATATGATTTTGTAGGC+CGG - Chr6:101999488-101999507 MsG0680035314.01.T01:intron 30.0%
! GTTCAAGTAAGGTTTAAGTT+TGG - Chr6:101996478-101996497 MsG0680035314.01.T01:intron 30.0%
! TGATGATGTATTCTCAATTC+AGG - Chr6:101998664-101998683 MsG0680035314.01.T01:intron 30.0%
! TTTAAAAAGCACACAAGAGA+TGG + Chr6:101997490-101997509 None:intergenic 30.0%
!! AAAAGCATCTACGAAATTTG+AGG - Chr6:101999757-101999776 MsG0680035314.01.T01:CDS 30.0%
!! ATGTTGATTGAGTCATTTTC+TGG - Chr6:101999148-101999167 MsG0680035314.01.T01:intron 30.0%
!! GCCTTTTATTTCATAAGTCT+TGG + Chr6:101998025-101998044 None:intergenic 30.0%
!! TCAAAAAAATTGATGATGGC+TGG + Chr6:101998204-101998223 None:intergenic 30.0%
!!! AAGTTGAGTTTTTGGGTATA+AGG - Chr6:101999120-101999139 MsG0680035314.01.T01:intron 30.0%
!!! AGTTATTTTTTTAAGGGACG+GGG - Chr6:101999047-101999066 MsG0680035314.01.T01:intron 30.0%
AAAAAGGTCATTGCTAAACC+TGG - Chr6:101999728-101999747 MsG0680035314.01.T01:CDS 35.0%
AAACATCCAGTAGGACATTA+AGG + Chr6:101997108-101997127 None:intergenic 35.0%
AAATGAGGAGATTGGAAGAA+AGG - Chr6:101998559-101998578 MsG0680035314.01.T01:intron 35.0%
AACTAAAATGGAGGGCTAAA+TGG - Chr6:101998335-101998354 MsG0680035314.01.T01:intron 35.0%
AACTTCATCGTCAACTTTGA+TGG + Chr6:101999105-101999124 None:intergenic 35.0%
AAGTAGGTATTCTACTGAAG+TGG - Chr6:101997363-101997382 MsG0680035314.01.T01:intron 35.0%
AATTATATAAACTCCTGCGC+GGG + Chr6:101997680-101997699 None:intergenic 35.0%
ACTATTGGACAATTGGATCA+CGG - Chr6:101996044-101996063 MsG0680035314.01.T01:intron 35.0%
ACTTCAGTAGAATACCTACT+TGG + Chr6:101997364-101997383 None:intergenic 35.0%
AGAAAGCTTCATGTTAACGT+CGG - Chr6:101996020-101996039 MsG0680035314.01.T01:intron 35.0%
AGAGAGAATATGTTACGTTC+GGG + Chr6:101995937-101995956 None:intergenic 35.0%
AGTAGAAGAGAAAAGGTGAA+AGG + Chr6:101995887-101995906 None:intergenic 35.0%
ATATGTACTCACAAAGGATG+AGG - Chr6:101999787-101999806 MsG0680035314.01.T01:intron 35.0%
ATGCAAGGAATTTATCACTC+TGG + Chr6:101999313-101999332 None:intergenic 35.0%
ATTGTGTCGTGTCAATTTCA+AGG + Chr6:101998826-101998845 None:intergenic 35.0%
CAAAATCAAGAGTGATCTAG+TGG - Chr6:101998238-101998257 MsG0680035314.01.T01:intron 35.0%
CATTGAAATAAATACGAGCC+CGG - Chr6:101998737-101998756 MsG0680035314.01.T01:intron 35.0%
CTGAAGATAAGAGAAGAGTT+CGG - Chr6:101996283-101996302 MsG0680035314.01.T01:CDS 35.0%
GAAGATTTCGTATAAAGGAC+AGG - Chr6:101999415-101999434 MsG0680035314.01.T01:intron 35.0%
TATGTACTCACAAAGGATGA+GGG - Chr6:101999788-101999807 MsG0680035314.01.T01:intron 35.0%
TATTTGTACATGAGTTGTGC+AGG - Chr6:101997456-101997475 MsG0680035314.01.T01:intron 35.0%
TCCAACTGAAATTGGATAGA+TGG + Chr6:101998852-101998871 None:intergenic 35.0%
TGAACATAATCTACATGTCG+AGG + Chr6:101996463-101996482 None:intergenic 35.0%
TGCTTTACAAGGTACAAATG+AGG - Chr6:101998544-101998563 MsG0680035314.01.T01:intron 35.0%
! AAAACTAAGTTTTCCCTGGT+AGG - Chr6:101999349-101999368 MsG0680035314.01.T01:intron 35.0%
! AAACTAAGTTTTCCCTGGTA+GGG - Chr6:101999350-101999369 MsG0680035314.01.T01:intron 35.0%
! AGAGACAACCATGTTTTTCA+AGG + Chr6:101998882-101998901 None:intergenic 35.0%
! GACGATGAAGTTGAGTTTTT+GGG - Chr6:101999113-101999132 MsG0680035314.01.T01:intron 35.0%
! GATTTTACAGGGCAAAGATT+TGG - Chr6:102000287-102000306 MsG0680035314.01.T01:CDS 35.0%
! GTAGATGCTTTTATAGTACC+AGG + Chr6:101999749-101999768 None:intergenic 35.0%
! TCCTAAAACTAAGTTTTCCC+TGG - Chr6:101999345-101999364 MsG0680035314.01.T01:intron 35.0%
! TGACGATGAAGTTGAGTTTT+TGG - Chr6:101999112-101999131 MsG0680035314.01.T01:intron 35.0%
!! ACCAGGGAAAACTTAGTTTT+AGG + Chr6:101999349-101999368 None:intergenic 35.0%
!! ACTATTTTGCCCTCTAGTTT+TGG + Chr6:101998141-101998160 None:intergenic 35.0%
!! TGAGTCATTTTCTGGATGTA+GGG - Chr6:101999156-101999175 MsG0680035314.01.T01:intron 35.0%
!! TTGAGTCATTTTCTGGATGT+AGG - Chr6:101999155-101999174 MsG0680035314.01.T01:intron 35.0%
!!! TGGTTGATGGTTTCATTTTC+AGG - Chr6:101996384-101996403 MsG0680035314.01.T01:CDS 35.0%
AAAATGGAGGGCTAAATGGA+GGG - Chr6:101998339-101998358 MsG0680035314.01.T01:intron 40.0%
AAACTTGCAGACATTGAACG+TGG - Chr6:101999542-101999561 MsG0680035314.01.T01:intron 40.0%
ACAAATACAAGGACGATTGC+AGG + Chr6:101997642-101997661 None:intergenic 40.0%
ACACAAATGCAAAACCACAG+AGG + Chr6:101997204-101997223 None:intergenic 40.0%
ACAGCAGTAACATTGTCTAC+AGG + Chr6:101999920-101999939 None:intergenic 40.0%
ATAATAGGGATATCATCCCC+AGG + Chr6:101998506-101998525 None:intergenic 40.0%
ATACCTCGAGACTATCAATC+AGG + Chr6:101998782-101998801 None:intergenic 40.0%
ATATACTGACCTGGTTCAAG+TGG + Chr6:101999965-101999984 None:intergenic 40.0%
ATCAAGGTTGGGAATATGGT+TGG - Chr6:101998172-101998191 MsG0680035314.01.T01:intron 40.0%
ATGAAGGCCAACATAATCAC+CGG + Chr6:101999510-101999529 None:intergenic 40.0%
ATGGAAATACACGAGAGATG+TGG - Chr6:101998091-101998110 MsG0680035314.01.T01:intron 40.0%
ATTACGCCTTAATGTCCTAC+TGG - Chr6:101997099-101997118 MsG0680035314.01.T01:CDS 40.0%
CAAATTAGGGTTGGGGATTT+AGG - Chr6:101998379-101998398 MsG0680035314.01.T01:intron 40.0%
CAAGGAAGACTGTGATACTT+AGG + Chr6:101998945-101998964 None:intergenic 40.0%
CAAGGTACAAATGAGGAGAT+TGG - Chr6:101998551-101998570 MsG0680035314.01.T01:intron 40.0%
CAATCAACACCAACCCAAAT+GGG + Chr6:101996698-101996717 None:intergenic 40.0%
CACTCAATAGATTAAGCACG+AGG + Chr6:101999204-101999223 None:intergenic 40.0%
CATCACAACTTCAGTAACTG+TGG + Chr6:101999390-101999409 None:intergenic 40.0%
CATGTTAACGTCGGAACTAT+TGG - Chr6:101996029-101996048 MsG0680035314.01.T01:intron 40.0%
CCATTACTTCCTTGCATCTA+AGG - Chr6:101997420-101997439 MsG0680035314.01.T01:intron 40.0%
CCTTAGATGCAAGGAAGTAA+TGG + Chr6:101997423-101997442 None:intergenic 40.0%
CGAACTCTTCTCTTATCTTC+AGG + Chr6:101996285-101996304 None:intergenic 40.0%
CTCTACTGTTCCGGTTATAT+CGG + Chr6:101999870-101999889 None:intergenic 40.0%
CTTTCAGAAGGAACCCATTT+GGG - Chr6:101996682-101996701 MsG0680035314.01.T01:intron 40.0%
GAGGAATGACGAGAATTCAA+GGG + Chr6:101999185-101999204 None:intergenic 40.0%
GCCATCTATCCAATTTCAGT+TGG - Chr6:101998848-101998867 MsG0680035314.01.T01:CDS 40.0%
GGTCACTGAAAAGTTTGTCA+CGG - Chr6:101997029-101997048 MsG0680035314.01.T01:intron 40.0%
GTCAATCAAGGTTGGGAATA+TGG - Chr6:101998168-101998187 MsG0680035314.01.T01:intron 40.0%
TAAAATGGAGGGCTAAATGG+AGG - Chr6:101998338-101998357 MsG0680035314.01.T01:intron 40.0%
TAATAGGGATATCATCCCCA+GGG + Chr6:101998505-101998524 None:intergenic 40.0%
TAGGCATGAAATTGAGATCG+TGG - Chr6:101997850-101997869 MsG0680035314.01.T01:intron 40.0%
TCAAGAAAGGCTTATCAAGC+TGG + Chr6:101998637-101998656 None:intergenic 40.0%
TCAATCAACACCAACCCAAA+TGG + Chr6:101996699-101996718 None:intergenic 40.0%
TCAGCATTGTCTGCTTTACA+AGG - Chr6:101998533-101998552 MsG0680035314.01.T01:intron 40.0%
TCATCAATGGGCATCAAGAA+AGG + Chr6:101998650-101998669 None:intergenic 40.0%
TCTAGGTTCTTGCTGATGAA+GGG - Chr6:101996220-101996239 MsG0680035314.01.T01:intron 40.0%
TGGAAATACACGAGAGATGT+GGG - Chr6:101998092-101998111 MsG0680035314.01.T01:intron 40.0%
TGTCTGCAAGTTTCAGATCA+CGG + Chr6:101999535-101999554 None:intergenic 40.0%
TTCTAGGTTCTTGCTGATGA+AGG - Chr6:101996219-101996238 MsG0680035314.01.T01:intron 40.0%
! ATAGACCTCAAGTTTGCTTG+AGG - Chr6:101999840-101999859 MsG0680035314.01.T01:intron 40.0%
! TCAGTAACTGTGGTTTTCAG+AGG + Chr6:101999380-101999399 None:intergenic 40.0%
!! CGAATGTGCTCTTTTGTTTG+AGG + Chr6:101997332-101997351 None:intergenic 40.0%
!! TGCTCTTTTGTTTGAGGCAT+TGG + Chr6:101997326-101997345 None:intergenic 40.0%
!!! TGAGTTTTTGGGTATAAGGC+AGG - Chr6:101999124-101999143 MsG0680035314.01.T01:intron 40.0%
AAATACACGAGAGATGTGGG+AGG - Chr6:101998095-101998114 MsG0680035314.01.T01:intron 45.0%
AAGGACGATTGCAGGAAGTT+AGG + Chr6:101997634-101997653 None:intergenic 45.0%
AATACACGAGAGATGTGGGA+GGG - Chr6:101998096-101998115 MsG0680035314.01.T01:intron 45.0%
ACTCCTATGAAGCACGGATA+CGG - Chr6:102000046-102000065 MsG0680035314.01.T01:intron 45.0%
ATGCACTTTATGCTGGAGTG+TGG - Chr6:102000243-102000262 MsG0680035314.01.T01:intron 45.0%
CAGTCAACTCCTATGAAGCA+CGG - Chr6:102000040-102000059 MsG0680035314.01.T01:intron 45.0%
CATCTGGTGCAGATACAACA+AGG + Chr6:101997301-101997320 None:intergenic 45.0%
CGAGGAATGACGAGAATTCA+AGG + Chr6:101999186-101999205 None:intergenic 45.0%
CGTCGGAACTATTGGACAAT+TGG - Chr6:101996037-101996056 MsG0680035314.01.T01:intron 45.0%
GCTTTCAGAAGGAACCCATT+TGG - Chr6:101996681-101996700 MsG0680035314.01.T01:intron 45.0%
GGAAACACCGTTAGAATGCA+AGG + Chr6:101999328-101999347 None:intergenic 45.0%
GTTGTTAGAGCGCGTAGAAA+TGG - Chr6:101997537-101997556 MsG0680035314.01.T01:CDS 45.0%
GTTTCAGATCACGGAGATGA+AGG + Chr6:101999526-101999545 None:intergenic 45.0%
TACTCACAAAGGATGAGGGT+GGG - Chr6:101999792-101999811 MsG0680035314.01.T01:intron 45.0%
TAGTCACTGTCGCAAGATTG+AGG - Chr6:101999602-101999621 MsG0680035314.01.T01:intron 45.0%
TCTTAGAGAAACACCCACCA+CGG + Chr6:101997567-101997586 None:intergenic 45.0%
TGAGCTTCTACAAGTTCCCT+GGG - Chr6:101998486-101998505 MsG0680035314.01.T01:intron 45.0%
TGCGACAGTGACTAACAAAG+AGG + Chr6:101999596-101999615 None:intergenic 45.0%
TGTACATGAGTTGTGCAGGT+TGG - Chr6:101997460-101997479 MsG0680035314.01.T01:intron 45.0%
TTCGCTGCAGACCCATTATT+TGG - Chr6:101998297-101998316 MsG0680035314.01.T01:intron 45.0%
TTCTGGCAACTCTACTGTTC+CGG + Chr6:101999879-101999898 None:intergenic 45.0%
TTGAGGACTGCCGATATAAC+CGG - Chr6:101999857-101999876 MsG0680035314.01.T01:intron 45.0%
TTGTAGGCCGGTGATTATGT+TGG - Chr6:101999500-101999519 MsG0680035314.01.T01:intron 45.0%
TTTCCTGTTCCACTTGAACC+AGG - Chr6:101999953-101999972 MsG0680035314.01.T01:CDS 45.0%
TTTGATGAGGTATGCCTCTG+TGG - Chr6:101997187-101997206 MsG0680035314.01.T01:intron 45.0%
! CTTGTTGTATCTGCACCAGA+TGG - Chr6:101997299-101997318 MsG0680035314.01.T01:intron 45.0%
! GTACCTGATTGATAGTCTCG+AGG - Chr6:101998776-101998795 MsG0680035314.01.T01:intron 45.0%
! GTGAGTTGACCTATGAAGCA+CGG + Chr6:102000216-102000235 None:intergenic 45.0%
!! AGATTTGGCTTGAGAGAGGA+TGG - Chr6:102000302-102000321 MsG0680035314.01.T01:CDS 45.0%
!! GAGTGTTGACCTTAGATGCA+AGG + Chr6:101997432-101997451 None:intergenic 45.0%
!! GCAAAGATTTGGCTTGAGAG+AGG - Chr6:102000298-102000317 MsG0680035314.01.T01:CDS 45.0%
!!! AAATTTTATAAAAACTATAA+TGG - Chr6:101997818-101997837 MsG0680035314.01.T01:intron 5.0%
!!! ATTATTAGTTATTTTTTTAA+GGG - Chr6:101999041-101999060 MsG0680035314.01.T01:intron 5.0%
!!! TATTATTAGTTATTTTTTTA+AGG - Chr6:101999040-101999059 MsG0680035314.01.T01:intron 5.0%
AACGAGGTGGCCAAAACTAG+AGG - Chr6:101998128-101998147 MsG0680035314.01.T01:intron 50.0%
AAGGATACCGCAATCCATGC+GGG + Chr6:101997282-101997301 None:intergenic 50.0%
ACGAGGTGGCCAAAACTAGA+GGG - Chr6:101998129-101998148 MsG0680035314.01.T01:intron 50.0%
CAAGGATACCGCAATCCATG+CGG + Chr6:101997283-101997302 None:intergenic 50.0%
CAGAAGGAACCCATTTGGGT+TGG - Chr6:101996686-101996705 MsG0680035314.01.T01:intron 50.0%
CTGAGCTTCTACAAGTTCCC+TGG - Chr6:101998485-101998504 MsG0680035314.01.T01:intron 50.0%
GAGCTTCTACAAGTTCCCTG+GGG - Chr6:101998487-101998506 MsG0680035314.01.T01:intron 50.0%
GAGGATGGTACCAGAACAGT+TGG - Chr6:102000317-102000336 MsG0680035314.01.T01:CDS 50.0%
GATTAATGGAACTGCCCGCA+TGG - Chr6:101997265-101997284 MsG0680035314.01.T01:intron 50.0%
GCAGTCCTCAAGCAAACTTG+AGG + Chr6:101999848-101999867 None:intergenic 50.0%
GCTTATCAAGCTGGCGAACA+GGG + Chr6:101998628-101998647 None:intergenic 50.0%
GTACTCACAAAGGATGAGGG+TGG - Chr6:101999791-101999810 MsG0680035314.01.T01:intron 50.0%
TAGAAATGGAGCTCCGTGGT+GGG - Chr6:101997551-101997570 MsG0680035314.01.T01:CDS 50.0%
TGACCTGGTTCAAGTGGAAC+AGG + Chr6:101999959-101999978 None:intergenic 50.0%
TGCAGACATTGAACGTGGTC+AGG - Chr6:101999547-101999566 MsG0680035314.01.T01:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + Chr6:102000052-102000071 None:intergenic 50.0%
! ATTCGTCTAGCTCGCCAAGT+AGG - Chr6:101997347-101997366 MsG0680035314.01.T01:intron 50.0%
! CTAAGTTTTCCCTGGTAGGG+CGG - Chr6:101999353-101999372 MsG0680035314.01.T01:intron 50.0%
!! GTTTGAGGCATTGGTCCATC+TGG + Chr6:101997317-101997336 None:intergenic 50.0%
AGGGCGAAATTGGAACGAGG+TGG - Chr6:101998115-101998134 MsG0680035314.01.T01:intron 55.0%
ATCAAGCTGGCGAACAGGGT+CGG + Chr6:101998624-101998643 None:intergenic 55.0%
CACACCTGCACCAACTGTTC+TGG + Chr6:102000330-102000349 None:intergenic 55.0%
CTCAGTGTCTGTGTCGTGTC+CGG + Chr6:102000075-102000094 None:intergenic 55.0%
GAGATGTGGGAGGGCGAAAT+TGG - Chr6:101998105-101998124 MsG0680035314.01.T01:intron 55.0%
GCTGCTGGTCGTGTTGAACA+AGG - Chr6:101999077-101999096 MsG0680035314.01.T01:intron 55.0%
GGCTTATCAAGCTGGCGAAC+AGG + Chr6:101998629-101998648 None:intergenic 55.0%
GGGAACGAGTGAGAGAAGTG+TGG + Chr6:101995917-101995936 None:intergenic 55.0%
GGTCTGCAGCGAATCGAACT+GGG + Chr6:101998290-101998309 None:intergenic 55.0%
GTAGAAATGGAGCTCCGTGG+TGG - Chr6:101997550-101997569 MsG0680035314.01.T01:CDS 55.0%
TCACAAAGGATGAGGGTGGG+CGG - Chr6:101999795-101999814 MsG0680035314.01.T01:intron 55.0%
TGAAGCACGGATACGGACAC+CGG - Chr6:102000053-102000072 MsG0680035314.01.T01:intron 55.0%
! CAGAACAGTTGGTGCAGGTG+TGG - Chr6:102000328-102000347 MsG0680035314.01.T01:CDS 55.0%
! GGTACCAGAACAGTTGGTGC+AGG - Chr6:102000323-102000342 MsG0680035314.01.T01:CDS 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG - Chr6:102000204-102000223 MsG0680035314.01.T01:intron 55.0%
!! TGTCGGTGTCGTGTCAGTGT+CGG - Chr6:102000148-102000167 MsG0680035314.01.T01:CDS 55.0%
AACTAGATCGTGACCCGCGC+AGG - Chr6:101997664-101997683 MsG0680035314.01.T01:CDS 60.0%
CGCGTAGAAATGGAGCTCCG+TGG - Chr6:101997547-101997566 MsG0680035314.01.T01:CDS 60.0%
GACACCGGGACACGCCTAAT+CGG - Chr6:102000182-102000201 MsG0680035314.01.T01:intron 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + Chr6:102000183-102000202 None:intergenic 60.0%
GCACGGACACTCCTCCGATT+AGG + Chr6:102000199-102000218 None:intergenic 60.0%
GGGAGGGCGAAATTGGAACG+AGG - Chr6:101998112-101998131 MsG0680035314.01.T01:intron 60.0%
GGGTCTGCAGCGAATCGAAC+TGG + Chr6:101998291-101998310 None:intergenic 60.0%
TCAAGCTGGCGAACAGGGTC+GGG + Chr6:101998623-101998642 None:intergenic 60.0%
TCCTCCGATTAGGCGTGTCC+CGG + Chr6:102000189-102000208 None:intergenic 60.0%
TCGGACACAGTGTCCGACAC+CGG - Chr6:102000167-102000186 MsG0680035314.01.T01:intron 60.0%
TTCAGAGGACCGCCCTACCA+GGG + Chr6:101999365-101999384 None:intergenic 60.0%
TTTCAGAGGACCGCCCTACC+AGG + Chr6:101999366-101999385 None:intergenic 60.0%
! GGAACTGCCCGCATGGATTG+CGG - Chr6:101997272-101997291 MsG0680035314.01.T01:intron 60.0%
ACCGGGACACGCCTAATCGG+AGG - Chr6:102000185-102000204 MsG0680035314.01.T01:intron 65.0%
CGGACACAGTGTCCGACACC+GGG - Chr6:102000168-102000187 MsG0680035314.01.T01:intron 65.0%
GGACGGGGAACGATTGCTGC+TGG - Chr6:101999062-101999081 MsG0680035314.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 101995831 102000370 101995831 ID=MsG0680035314.01;Name=MsG0680035314.01
Chr6 mRNA 101995831 102000370 101995831 ID=MsG0680035314.01.T01;Parent=MsG0680035314.01;Name=MsG0680035314.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0.22|0.4|1|1|1|10|0|415
Chr6 exon 102000261 102000370 102000261 ID=MsG0680035314.01.T01:exon:20876;Parent=MsG0680035314.01.T01
Chr6 exon 102000104 102000179 102000104 ID=MsG0680035314.01.T01:exon:20875;Parent=MsG0680035314.01.T01
Chr6 exon 101999902 101999976 101999902 ID=MsG0680035314.01.T01:exon:20874;Parent=MsG0680035314.01.T01
Chr6 exon 101999718 101999795 101999718 ID=MsG0680035314.01.T01:exon:20873;Parent=MsG0680035314.01.T01
Chr6 exon 101998833 101998941 101998833 ID=MsG0680035314.01.T01:exon:20872;Parent=MsG0680035314.01.T01
Chr6 exon 101997516 101997721 101997516 ID=MsG0680035314.01.T01:exon:20871;Parent=MsG0680035314.01.T01
Chr6 exon 101997056 101997139 101997056 ID=MsG0680035314.01.T01:exon:20870;Parent=MsG0680035314.01.T01
Chr6 exon 101996633 101996695 101996633 ID=MsG0680035314.01.T01:exon:20869;Parent=MsG0680035314.01.T01
Chr6 exon 101996227 101996467 101996227 ID=MsG0680035314.01.T01:exon:20868;Parent=MsG0680035314.01.T01
Chr6 exon 101995831 101996036 101995831 ID=MsG0680035314.01.T01:exon:20867;Parent=MsG0680035314.01.T01
Chr6 CDS 102000261 102000370 102000261 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 102000104 102000179 102000104 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101999902 101999976 101999902 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101999718 101999795 101999718 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101998833 101998941 101998833 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101997516 101997721 101997516 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101997056 101997139 101997056 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101996633 101996695 101996633 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101996227 101996467 101996227 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Chr6 CDS 101995831 101996036 101995831 ID=MsG0680035314.01.T01:cds;Parent=MsG0680035314.01.T01
Gene Sequence

>MsG0680035314.01.T01

ATGGCTTCTACGATTCTTCTCCGAAACTCTTCTTCTTCTTCTACTTTCAAACGCCTTTCACCTTTTCTCTTCTACTCTCAATTCCACACTTCTCTCACTCGTTCCCGAACAAAGCTTCATGTTAACGTCGGAACTATTGGACAATTGGATCACGGAAAAACGACACTAACTGCTGCAATCACCAGAGTTCTTGCTGATGAAGGGAAAGCGAAAGCTGTAGCTTTTGATGAAATTGATAGGGCTCCTGAAGATAAGAGAAGAGCTCATCATGTTAAGTATGAGACTGCTAAAAGGCATTATACACATGTCGATTGTCCTCGACATGTAGATTATGTTCAAAATATGATTAATGGAACTGCCCGCATGGATTGCGGTATCCTTGTTGTATCTGCACCAGATGGACCAATGCCTCAAACAAAAGAGCACATTCGTCTAGCTCGCCAAGTAGAGCTTCTGAGCTTCTACAAGTTCCCTGGGGATGATATCCCTATTATTAGAGGTTCAGCATTGTCTGCTTTACAAGGTACAAATGAGGAGATTGGAAGAAAGGCCATTTTAAAATTAATGGATGTTATAGATGAATACATTCCCGACCCTGTTCGCCAGCTTGATAAGCCTTTCTTGATGCCCATTGATGATGTATTCTCAATTCAGGGACGGGGAACGATTGCTGCTGGTCGTGTTGAACAAGGAACCATCAAAGTTGACGATGAAGTTGAGTTTTTGGGTATAAGGCAGGCCGGTGATTATGTTGGCCTTCATCTCCGTGATCTGAAACTTGCAGACATTGAACGTGGTCAGGTCATTGCTAAACCTGGTACTATAAAAGCATCTACGAAATTTGAGGCAGAGATATATGTACTCACAAAGGATGAGGGTGGGCGGCACACTACTTTCTTCTCTAACTATAGACCTCAAGTTTGCTTGAGGACTGCCGATATAACCGGAACAGTAGAGTTGCCAGAAAATGTTAAAATGGTTATGCCTGTAGACAATGTTACTGCTGTAATTGAATTAATGTTTCCTGTTCCACTTGAACCAGTGTCGGACACAGTGTCCGACACCGGGACACGCCTAATCGGAGGAGTGTCCGTGCTTCATAGGTCAACTCACATTTATTATGCACTTTATGCTGGAGTGTGGAAAGCTCACTGCTTGTTATTTGATTTTACAGGGCAAAGATTTGGCTTGAGAGAGGATGGTACCAGAACAGTTGGTGCAGGTGTGGTGACGAAAGTGCTAAGCTAA
Protein sequence

>MsG0680035314.01.T01

MASTILLRNSSSSSTFKRLSPFLFYSQFHTSLTRSRTKLHVNVGTIGQLDHGKTTLTAAITRVLADEGKAKAVAFDEIDRAPEDKRRAHHVKYETAKRHYTHVDCPRHVDYVQNMINGTARMDCGILVVSAPDGPMPQTKEHIRLARQVELLSFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKLMDVIDEYIPDPVRQLDKPFLMPIDDVFSIQGRGTIAAGRVEQGTIKVDDEVEFLGIRQAGDYVGLHLRDLKLADIERGQVIAKPGTIKASTKFEAEIYVLTKDEGGRHTTFFSNYRPQVCLRTADITGTVELPENVKMVMPVDNVTAVIELMFPVPLEPVSDTVSDTGTRLIGGVSVLHRSTHIYYALYAGVWKAHCLLFDFTGQRFGLREDGTRTVGAGVVTKVLS*