Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039075.01.T01 | KEH23102.1 | 92.791 | 430 | 30 | 1 | 1 | 429 | 1 | 430 | 0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039075.01.T01 | A0A072U0C9 | 92.791 | 430 | 30 | 1 | 1 | 429 | 1 | 430 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039075.01.T01 | MTR_7g066480 | 92.791 | 430 | 30 | 1 | 1 | 429 | 1 | 430 | 0.0 | 801 |
| MsG0780039075.01.T01 | MTR_7g066490 | 82.870 | 432 | 55 | 4 | 1 | 429 | 1 | 416 | 0.0 | 695 |
| MsG0780039075.01.T01 | MTR_7g066260 | 43.077 | 455 | 206 | 11 | 16 | 422 | 15 | 464 | 4.09e-97 | 300 |
| MsG0780039075.01.T01 | MTR_7g066340 | 41.593 | 452 | 211 | 11 | 16 | 422 | 12 | 455 | 1.09e-95 | 295 |
| MsG0780039075.01.T01 | MTR_7g066350 | 42.058 | 447 | 205 | 9 | 16 | 417 | 9 | 446 | 2.10e-92 | 286 |
| MsG0780039075.01.T01 | MTR_7g062300 | 37.021 | 470 | 217 | 8 | 16 | 417 | 12 | 470 | 1.10e-89 | 280 |
| MsG0780039075.01.T01 | MTR_7g066410 | 46.132 | 349 | 150 | 7 | 16 | 331 | 10 | 353 | 5.84e-89 | 280 |
| MsG0780039075.01.T01 | MTR_7g066410 | 62.651 | 83 | 31 | 0 | 339 | 421 | 431 | 513 | 1.20e-22 | 100 |
| MsG0780039075.01.T01 | MTR_7g066410 | 26.609 | 233 | 142 | 7 | 16 | 229 | 284 | 506 | 3.02e-12 | 68.6 |
| MsG0780039075.01.T01 | MTR_7g066290 | 41.609 | 435 | 220 | 11 | 11 | 421 | 10 | 434 | 2.21e-88 | 275 |
| MsG0780039075.01.T01 | MTR_7g062280 | 37.882 | 491 | 206 | 12 | 16 | 421 | 10 | 486 | 6.61e-88 | 276 |
| MsG0780039075.01.T01 | MTR_7g066430 | 47.059 | 340 | 162 | 5 | 14 | 341 | 2 | 335 | 6.71e-88 | 276 |
| MsG0780039075.01.T01 | MTR_7g066430 | 53.125 | 96 | 43 | 1 | 325 | 420 | 392 | 485 | 5.54e-21 | 95.5 |
| MsG0780039075.01.T01 | MTR_7g066360 | 41.964 | 448 | 207 | 11 | 17 | 422 | 15 | 451 | 3.06e-87 | 274 |
| MsG0780039075.01.T01 | MTR_7g012680 | 39.651 | 459 | 200 | 8 | 16 | 422 | 14 | 447 | 1.38e-86 | 271 |
| MsG0780039075.01.T01 | MTR_3g007740 | 40.481 | 457 | 209 | 11 | 11 | 421 | 4 | 443 | 3.81e-86 | 270 |
| MsG0780039075.01.T01 | MTR_7g063880 | 37.838 | 481 | 208 | 10 | 16 | 427 | 11 | 469 | 1.26e-82 | 261 |
| MsG0780039075.01.T01 | MTR_7g063660 | 36.842 | 475 | 220 | 11 | 16 | 421 | 9 | 472 | 5.08e-81 | 258 |
| MsG0780039075.01.T01 | MTR_1g041315 | 37.868 | 441 | 219 | 8 | 16 | 404 | 14 | 451 | 7.97e-81 | 258 |
| MsG0780039075.01.T01 | MTR_7g063920 | 37.229 | 462 | 191 | 9 | 16 | 420 | 11 | 430 | 1.54e-79 | 253 |
| MsG0780039075.01.T01 | MTR_7g063670 | 37.500 | 472 | 219 | 10 | 4 | 421 | 3 | 452 | 1.26e-78 | 251 |
| MsG0780039075.01.T01 | MTR_7g066400 | 37.778 | 450 | 207 | 10 | 14 | 416 | 10 | 433 | 3.01e-76 | 244 |
| MsG0780039075.01.T01 | MTR_7g063830 | 39.341 | 455 | 216 | 13 | 11 | 421 | 1 | 439 | 3.42e-76 | 244 |
| MsG0780039075.01.T01 | MTR_7g066570 | 44.136 | 324 | 162 | 4 | 17 | 332 | 15 | 327 | 8.64e-75 | 244 |
| MsG0780039075.01.T01 | MTR_7g066570 | 58.333 | 72 | 30 | 0 | 351 | 422 | 411 | 482 | 1.80e-16 | 82.0 |
| MsG0780039075.01.T01 | MTR_7g063900 | 42.229 | 341 | 180 | 5 | 12 | 344 | 5 | 336 | 2.27e-73 | 238 |
| MsG0780039075.01.T01 | MTR_7g058700 | 37.559 | 426 | 190 | 8 | 28 | 416 | 531 | 917 | 2.14e-72 | 244 |
| MsG0780039075.01.T01 | MTR_7g066310 | 36.199 | 442 | 184 | 11 | 16 | 422 | 7 | 385 | 2.62e-72 | 233 |
| MsG0780039075.01.T01 | MTR_7g058710 | 34.949 | 495 | 214 | 11 | 16 | 426 | 12 | 482 | 3.59e-72 | 235 |
| MsG0780039075.01.T01 | MTR_7g063890 | 42.655 | 354 | 174 | 8 | 12 | 350 | 21 | 360 | 1.16e-70 | 231 |
| MsG0780039075.01.T01 | MTR_7g063840 | 42.165 | 351 | 180 | 8 | 17 | 357 | 11 | 348 | 5.91e-69 | 226 |
| MsG0780039075.01.T01 | MTR_7g063820 | 43.385 | 325 | 164 | 9 | 17 | 332 | 11 | 324 | 2.09e-65 | 217 |
| MsG0780039075.01.T01 | MTR_1g014060 | 36.881 | 404 | 219 | 6 | 27 | 422 | 11 | 386 | 3.77e-63 | 209 |
| MsG0780039075.01.T01 | MTR_7g066580 | 41.768 | 328 | 148 | 10 | 22 | 341 | 1 | 293 | 2.02e-61 | 206 |
| MsG0780039075.01.T01 | MTR_7g066580 | 55.556 | 63 | 28 | 0 | 351 | 413 | 376 | 438 | 4.27e-13 | 71.2 |
| MsG0780039075.01.T01 | MTR_4g019310 | 34.073 | 496 | 229 | 13 | 19 | 426 | 11 | 496 | 1.79e-60 | 204 |
| MsG0780039075.01.T01 | MTR_4g019340 | 32.510 | 486 | 211 | 14 | 17 | 408 | 39 | 501 | 2.59e-46 | 167 |
| MsG0780039075.01.T01 | MTR_4g017410 | 30.879 | 489 | 247 | 15 | 14 | 421 | 7 | 485 | 2.75e-45 | 164 |
| MsG0780039075.01.T01 | MTR_4g017610 | 29.560 | 477 | 234 | 12 | 19 | 413 | 16 | 472 | 9.01e-45 | 162 |
| MsG0780039075.01.T01 | MTR_2g029400 | 33.962 | 318 | 140 | 6 | 16 | 332 | 14 | 262 | 1.03e-42 | 155 |
| MsG0780039075.01.T01 | MTR_2g029400 | 26.190 | 168 | 107 | 3 | 263 | 413 | 15 | 182 | 9.50e-12 | 66.6 |
| MsG0780039075.01.T01 | MTR_2g029400 | 53.226 | 62 | 29 | 0 | 348 | 409 | 343 | 404 | 3.29e-11 | 65.1 |
| MsG0780039075.01.T01 | MTR_3g065200 | 35.644 | 303 | 146 | 5 | 15 | 311 | 2 | 261 | 7.39e-40 | 149 |
| MsG0780039075.01.T01 | MTR_7g066280 | 30.166 | 421 | 172 | 14 | 95 | 422 | 1 | 392 | 8.42e-40 | 147 |
| MsG0780039075.01.T01 | MTR_4g017470 | 33.824 | 340 | 177 | 6 | 17 | 344 | 13 | 316 | 4.26e-39 | 147 |
| MsG0780039075.01.T01 | MTR_4g017830 | 34.783 | 368 | 188 | 15 | 17 | 353 | 13 | 359 | 1.42e-38 | 146 |
| MsG0780039075.01.T01 | MTR_4g017830 | 38.614 | 101 | 51 | 1 | 320 | 420 | 412 | 501 | 4.04e-11 | 65.1 |
| MsG0780039075.01.T01 | MTR_4g017440 | 31.967 | 366 | 193 | 9 | 14 | 344 | 12 | 356 | 6.38e-35 | 135 |
| MsG0780039075.01.T01 | MTR_7g063720 | 39.000 | 200 | 73 | 3 | 265 | 417 | 26 | 223 | 1.54e-33 | 126 |
| MsG0780039075.01.T01 | MTR_7g063720 | 28.261 | 230 | 140 | 10 | 6 | 229 | 10 | 220 | 2.81e-12 | 66.6 |
| MsG0780039075.01.T01 | MTR_7g062270 | 42.262 | 168 | 91 | 2 | 17 | 178 | 11 | 178 | 2.93e-33 | 129 |
| MsG0780039075.01.T01 | MTR_7g063690 | 32.967 | 273 | 120 | 8 | 17 | 289 | 13 | 222 | 2.23e-28 | 112 |
| MsG0780039075.01.T01 | MTR_4g017550 | 31.875 | 320 | 182 | 13 | 30 | 325 | 3 | 310 | 2.52e-27 | 114 |
| MsG0780039075.01.T01 | MTR_8g023240 | 29.874 | 318 | 190 | 10 | 17 | 323 | 38 | 333 | 3.47e-27 | 114 |
| MsG0780039075.01.T01 | MTR_7g066680 | 31.090 | 312 | 114 | 8 | 212 | 429 | 37 | 341 | 4.05e-26 | 108 |
| MsG0780039075.01.T01 | MTR_7g066390 | 47.619 | 126 | 60 | 2 | 303 | 423 | 1 | 125 | 1.43e-22 | 94.0 |
| MsG0780039075.01.T01 | MTR_8g445860 | 32.787 | 244 | 140 | 9 | 7 | 235 | 4 | 238 | 8.15e-22 | 94.4 |
| MsG0780039075.01.T01 | MTR_1g115440 | 31.646 | 237 | 135 | 9 | 16 | 234 | 11 | 238 | 6.67e-19 | 85.9 |
| MsG0780039075.01.T01 | MTR_4g019330 | 37.349 | 166 | 89 | 3 | 257 | 412 | 13 | 173 | 1.56e-16 | 77.8 |
| MsG0780039075.01.T01 | MTR_0150s0010 | 29.876 | 241 | 142 | 8 | 12 | 234 | 6 | 237 | 3.68e-16 | 78.2 |
| MsG0780039075.01.T01 | MTR_2g067310 | 37.255 | 153 | 63 | 4 | 27 | 179 | 58 | 177 | 9.04e-16 | 77.0 |
| MsG0780039075.01.T01 | MTR_1g115450 | 44.318 | 88 | 44 | 1 | 12 | 99 | 3 | 85 | 1.33e-13 | 68.2 |
| MsG0780039075.01.T01 | MTR_7g063850 | 34.459 | 148 | 75 | 5 | 186 | 332 | 5 | 131 | 2.51e-13 | 70.5 |
| MsG0780039075.01.T01 | MTR_7g063850 | 39.326 | 89 | 54 | 0 | 341 | 429 | 203 | 291 | 3.17e-12 | 67.4 |
| MsG0780039075.01.T01 | MTR_1g115455 | 27.984 | 243 | 142 | 7 | 12 | 235 | 5 | 233 | 6.22e-13 | 68.6 |
| MsG0780039075.01.T01 | MTR_0150s0030 | 41.379 | 87 | 45 | 2 | 14 | 99 | 6 | 87 | 3.39e-12 | 65.9 |
| MsG0780039075.01.T01 | MTR_4g019240 | 29.825 | 171 | 79 | 3 | 262 | 420 | 13 | 154 | 5.95e-12 | 64.7 |
| MsG0780039075.01.T01 | MTR_7g063760 | 43.056 | 72 | 40 | 1 | 356 | 426 | 2 | 73 | 7.55e-12 | 61.2 |
| MsG0780039075.01.T01 | MTR_8g445910 | 40.449 | 89 | 47 | 2 | 12 | 99 | 4 | 87 | 4.39e-11 | 63.5 |
| MsG0780039075.01.T01 | MTR_8g044880 | 40.449 | 89 | 47 | 2 | 12 | 99 | 4 | 87 | 6.17e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039075.01.T01 | AT3G09140 | 32.525 | 495 | 248 | 12 | 14 | 425 | 7 | 498 | 3.21e-56 | 193 |
| MsG0780039075.01.T01 | AT3G09140 | 31.154 | 520 | 250 | 13 | 14 | 425 | 7 | 526 | 8.05e-54 | 187 |
| MsG0780039075.01.T01 | AT5G01130 | 31.304 | 460 | 249 | 11 | 16 | 426 | 9 | 450 | 5.96e-50 | 176 |
| MsG0780039075.01.T01 | AT5G01120 | 31.006 | 487 | 238 | 12 | 17 | 416 | 10 | 485 | 6.47e-50 | 177 |
| MsG0780039075.01.T01 | AT3G09110 | 33.438 | 317 | 199 | 4 | 18 | 327 | 11 | 322 | 1.66e-45 | 161 |
| MsG0780039075.01.T01 | AT5G01140 | 28.151 | 476 | 246 | 8 | 18 | 426 | 11 | 457 | 2.19e-45 | 164 |
| MsG0780039075.01.T01 | AT5G01150 | 28.898 | 481 | 254 | 13 | 18 | 421 | 11 | 480 | 2.58e-42 | 156 |
| MsG0780039075.01.T01 | AT3G09120 | 32.716 | 324 | 187 | 7 | 12 | 316 | 2 | 313 | 1.33e-40 | 147 |
| MsG0780039075.01.T01 | AT5G37320 | 30.642 | 483 | 249 | 17 | 15 | 421 | 8 | 480 | 6.46e-40 | 149 |
| MsG0780039075.01.T01 | AT5G43240 | 33.333 | 366 | 209 | 11 | 17 | 357 | 10 | 365 | 2.14e-37 | 142 |
| MsG0780039075.01.T01 | AT5G43240 | 33.333 | 366 | 209 | 11 | 17 | 357 | 10 | 365 | 2.14e-37 | 142 |
| MsG0780039075.01.T01 | AT5G43240 | 33.333 | 366 | 209 | 11 | 17 | 357 | 10 | 365 | 2.14e-37 | 142 |
Find 65 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTTTCTGTGAAAATTT+TGG | 0.216022 | 7:+57537668 | MsG0780039075.01.T01:CDS |
| TATTGTTCCATCAAATTAAT+TGG | 0.226939 | 7:-57537918 | None:intergenic |
| TTGGATTTAAAATATCTTTC+AGG | 0.240482 | 7:-57539001 | None:intergenic |
| CAGTAGCAGCTTCGCTTCTT+AGG | 0.241207 | 7:-57538023 | None:intergenic |
| CTTAGACAATAAATCTGATT+TGG | 0.246131 | 7:-57539020 | None:intergenic |
| GAGAATTCCTCTCTCTGATT+TGG | 0.271322 | 7:+57539165 | MsG0780039075.01.T01:CDS |
| ATTCAAGAGCATGGTTGATT+TGG | 0.281674 | 7:+57538976 | MsG0780039075.01.T01:CDS |
| TGAGAAATTTGAGAATTATC+AGG | 0.305949 | 7:-57538152 | None:intergenic |
| TAAGAAAATTCTGTATGCTT+TGG | 0.306163 | 7:+57538847 | MsG0780039075.01.T01:CDS |
| AAGAAAATTCTGTATGCTTT+GGG | 0.312199 | 7:+57538848 | MsG0780039075.01.T01:CDS |
| AATGTATTGGATTTAGATTT+TGG | 0.319002 | 7:+57538761 | MsG0780039075.01.T01:CDS |
| GGTTCGACCAATTAATTTGA+TGG | 0.328737 | 7:+57537911 | MsG0780039075.01.T01:CDS |
| CAAGAGTCCTTCAACATATA+TGG | 0.334427 | 7:+57539078 | MsG0780039075.01.T01:CDS |
| TTGTCATTGGTTGCAAGAAA+TGG | 0.341523 | 7:-57539362 | None:intergenic |
| GGAGTTGAGAACATGTTAAA+TGG | 0.344732 | 7:+57538923 | MsG0780039075.01.T01:CDS |
| GTATCTTGGATGTGAAAATA+TGG | 0.345574 | 7:+57538196 | MsG0780039075.01.T01:CDS |
| TCCAATACATTGACAGGTCT+TGG | 0.352633 | 7:-57538749 | None:intergenic |
| GTTTCTCTTCTGAAGTATCT+TGG | 0.357240 | 7:+57538182 | MsG0780039075.01.T01:CDS |
| AGTTTCTTAACTTTGCCATT+AGG | 0.370562 | 7:+57537756 | MsG0780039075.01.T01:CDS |
| AAAATTCTCTTTGTCAAGGT+TGG | 0.380539 | 7:-57537862 | None:intergenic |
| ATTTAGTGAAGTGCTCCTTA+TGG | 0.380971 | 7:+57538672 | MsG0780039075.01.T01:CDS |
| GCATGGGAGCACACCTTGTA+AGG | 0.388782 | 7:+57538786 | MsG0780039075.01.T01:CDS |
| CTTCTATTGTTCCCCTTACA+AGG | 0.392190 | 7:-57538799 | None:intergenic |
| GACAAGAATACGTCTGTTAG+AGG | 0.400508 | 7:-57538704 | None:intergenic |
| TCATCATCAGCTCTAACTAT+TGG | 0.402695 | 7:+57539332 | MsG0780039075.01.T01:CDS |
| ACCAAGACCTGTCAATGTAT+TGG | 0.433905 | 7:+57538748 | MsG0780039075.01.T01:CDS |
| CAACAAAGTCCTTCCCTGCT+TGG | 0.437327 | 7:-57537722 | None:intergenic |
| CACAGAAACTTCAGTGGATG+GGG | 0.462605 | 7:-57537658 | None:intergenic |
| GAAGAAAGAATGATTAGCAT+TGG | 0.467741 | 7:+57539187 | MsG0780039075.01.T01:CDS |
| TCTGTTACCATATATGTTGA+AGG | 0.472437 | 7:-57539085 | None:intergenic |
| TCTAAATCCAATACATTGAC+AGG | 0.482402 | 7:-57538755 | None:intergenic |
| TCAGCTCTAACTATTGGTCT+TGG | 0.483988 | 7:+57539338 | MsG0780039075.01.T01:CDS |
| ACCTAAAATTCTCTTTGTCA+AGG | 0.486256 | 7:-57537866 | None:intergenic |
| TTCACAGAAACTTCAGTGGA+TGG | 0.488867 | 7:-57537660 | None:intergenic |
| GGAACAAAACCATTCTTAGC+AGG | 0.489021 | 7:-57538086 | None:intergenic |
| TAGAGGTGTCGCCGACCATA+AGG | 0.500207 | 7:-57538687 | None:intergenic |
| AGTCTTGCAATAGTGCCTAA+TGG | 0.507578 | 7:-57537771 | None:intergenic |
| ATAGATTATCTATGTTGTCT+AGG | 0.508322 | 7:-57538955 | None:intergenic |
| AAAGGAAATCGCATCGGTAG+AGG | 0.509174 | 7:-57539131 | None:intergenic |
| TCACAGAAACTTCAGTGGAT+GGG | 0.511080 | 7:-57537659 | None:intergenic |
| AAGGGGAACAATAGAAGTAA+AGG | 0.522163 | 7:+57538805 | MsG0780039075.01.T01:CDS |
| AACATGTTAAATGGAAACTC+TGG | 0.523592 | 7:+57538932 | MsG0780039075.01.T01:CDS |
| ATAAGAAAAGTTGCGGTCAC+CGG | 0.523846 | 7:-57538107 | None:intergenic |
| TCTGTATGCTTTGGGTGAAG+AGG | 0.540891 | 7:+57538856 | MsG0780039075.01.T01:CDS |
| GACTGTTGATATCACTCGTA+AGG | 0.541024 | 7:+57538235 | MsG0780039075.01.T01:CDS |
| CTTTCTTCCAAATCAGAGAG+AGG | 0.543946 | 7:-57539172 | None:intergenic |
| AACATGAAGAATGTTAGTGT+TGG | 0.544227 | 7:+57537810 | MsG0780039075.01.T01:CDS |
| TGTTCTCAACTCCTCCCAAA+GGG | 0.549781 | 7:-57538913 | None:intergenic |
| GATTAGCATTGGCAATAAAG+AGG | 0.572173 | 7:+57539198 | MsG0780039075.01.T01:CDS |
| CATGGGAGCACACCTTGTAA+GGG | 0.584012 | 7:+57538787 | MsG0780039075.01.T01:CDS |
| ATCTGAGATAAGAAAAGTTG+CGG | 0.589869 | 7:-57538114 | None:intergenic |
| AGATAATCTATTCAAGAGCA+TGG | 0.593603 | 7:+57538967 | MsG0780039075.01.T01:CDS |
| ATCGCATCGGTAGAGGAACC+TGG | 0.597504 | 7:-57539124 | None:intergenic |
| TTTATTTGTCCAAGCAGGGA+AGG | 0.601075 | 7:+57537713 | MsG0780039075.01.T01:CDS |
| AGTGAAGTGCTCCTTATGGT+CGG | 0.606083 | 7:+57538676 | MsG0780039075.01.T01:CDS |
| AACAATAGAAGTAAAGGCAA+TGG | 0.611013 | 7:+57538811 | MsG0780039075.01.T01:CDS |
| GTTACGTAGGAAAGTAGCCA+TGG | 0.616515 | 7:-57537622 | None:intergenic |
| ATGTTCTCAACTCCTCCCAA+AGG | 0.619718 | 7:-57538914 | None:intergenic |
| GAAAAGAACCTATTTATGTG+AGG | 0.621159 | 7:+57538055 | MsG0780039075.01.T01:CDS |
| AGTCAGAAAGGAAATCGCAT+CGG | 0.623415 | 7:-57539137 | None:intergenic |
| ATGGGAGCACACCTTGTAAG+GGG | 0.628802 | 7:+57538788 | MsG0780039075.01.T01:CDS |
| TTGATGACACAGAAAAGTTG+AGG | 0.631875 | 7:+57537964 | MsG0780039075.01.T01:CDS |
| CAAAGCAATTGAAGTTACGT+AGG | 0.644804 | 7:-57537635 | None:intergenic |
| TGTTGATATCACTCGTAAGG+AGG | 0.661482 | 7:+57538238 | MsG0780039075.01.T01:CDS |
| GATGACTTAGTCATCACACC+AGG | 0.706265 | 7:+57539106 | MsG0780039075.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGTGATTGTATTTA+TGG | - | Chr7:57538576-57538595 | None:intergenic | 15.0% |
| !!! | AGATTTTGAAAAAGAATTAT+TGG | + | Chr7:57537890-57537909 | MsG0780039075.01.T01:CDS | 15.0% |
| !!! | ATACATTTTAGAATTTACAA+AGG | - | Chr7:57538620-57538639 | None:intergenic | 15.0% |
| !!! | CTTATGTTTTAATTTTTTTG+TGG | + | Chr7:57539271-57539290 | MsG0780039075.01.T01:intron | 15.0% |
| !! | GTTATAGACATATAACAATT+TGG | + | Chr7:57538447-57538466 | MsG0780039075.01.T01:intron | 20.0% |
| !! | TATTGTTCCATCAAATTAAT+TGG | - | Chr7:57537921-57537940 | None:intergenic | 20.0% |
| !!! | AATGTATTGGATTTAGATTT+TGG | + | Chr7:57538761-57538780 | MsG0780039075.01.T01:CDS | 20.0% |
| !!! | TTGGATTTAAAATATCTTTC+AGG | - | Chr7:57539004-57539023 | None:intergenic | 20.0% |
| !!! | TTTTTTAACCTCACATAAAT+AGG | - | Chr7:57538066-57538085 | None:intergenic | 20.0% |
| ! | AAAAAGAAGTTAATTCCCAA+AGG | + | Chr7:57538372-57538391 | MsG0780039075.01.T01:intron | 25.0% |
| ! | AAGAAAATTCTGTATGCTTT+GGG | + | Chr7:57538848-57538867 | MsG0780039075.01.T01:CDS | 25.0% |
| ! | ATAGATTATCTATGTTGTCT+AGG | - | Chr7:57538958-57538977 | None:intergenic | 25.0% |
| ! | CATTTATATTGTAATCTCCT+AGG | - | Chr7:57538426-57538445 | None:intergenic | 25.0% |
| ! | CTTAGACAATAAATCTGATT+TGG | - | Chr7:57539023-57539042 | None:intergenic | 25.0% |
| ! | TAAGAAAATTCTGTATGCTT+TGG | + | Chr7:57538847-57538866 | MsG0780039075.01.T01:CDS | 25.0% |
| ! | TGAGAAATTTGAGAATTATC+AGG | - | Chr7:57538155-57538174 | None:intergenic | 25.0% |
| !! | AGCATACAGAATTTTCTTAT+TGG | - | Chr7:57538846-57538865 | None:intergenic | 25.0% |
| !! | CAAGTAAAATCCAATTTTGA+TGG | + | Chr7:57539043-57539062 | MsG0780039075.01.T01:CDS | 25.0% |
| !! | TGAAGTTTCTGTGAAAATTT+TGG | + | Chr7:57537668-57537687 | MsG0780039075.01.T01:CDS | 25.0% |
| !! | TGGGAATTAACTTCTTTTTA+CGG | - | Chr7:57538371-57538390 | None:intergenic | 25.0% |
| !!! | AAATTTTTTGACATTCCCTT+TGG | + | Chr7:57538898-57538917 | MsG0780039075.01.T01:CDS | 25.0% |
| !!! | AATTCTCATTTTAGTCAGAA+AGG | - | Chr7:57539152-57539171 | None:intergenic | 25.0% |
| !!! | AATTTTTTGACATTCCCTTT+GGG | + | Chr7:57538899-57538918 | MsG0780039075.01.T01:CDS | 25.0% |
| !!! | GATTTGTTTTCCATCAAAAT+TGG | - | Chr7:57539056-57539075 | None:intergenic | 25.0% |
| !!! | GTTTAAGATTTTCTTGTCAT+TGG | - | Chr7:57539378-57539397 | None:intergenic | 25.0% |
| AAAATTCTCTTTGTCAAGGT+TGG | - | Chr7:57537865-57537884 | None:intergenic | 30.0% | |
| AACAATAGAAGTAAAGGCAA+TGG | + | Chr7:57538811-57538830 | MsG0780039075.01.T01:CDS | 30.0% | |
| AACATGAAGAATGTTAGTGT+TGG | + | Chr7:57537810-57537829 | MsG0780039075.01.T01:CDS | 30.0% | |
| AACATGTTAAATGGAAACTC+TGG | + | Chr7:57538932-57538951 | MsG0780039075.01.T01:CDS | 30.0% | |
| ACAATTCCTATGATTTCCTT+TGG | - | Chr7:57538391-57538410 | None:intergenic | 30.0% | |
| ACCTAAAATTCTCTTTGTCA+AGG | - | Chr7:57537869-57537888 | None:intergenic | 30.0% | |
| AGATAATCTATTCAAGAGCA+TGG | + | Chr7:57538967-57538986 | MsG0780039075.01.T01:CDS | 30.0% | |
| AGTTTCTTAACTTTGCCATT+AGG | + | Chr7:57537756-57537775 | MsG0780039075.01.T01:CDS | 30.0% | |
| CAATTCCTATGATTTCCTTT+GGG | - | Chr7:57538390-57538409 | None:intergenic | 30.0% | |
| CATAAGAAACATGAACTTGT+CGG | - | Chr7:57539257-57539276 | None:intergenic | 30.0% | |
| GAAAAGAACCTATTTATGTG+AGG | + | Chr7:57538055-57538074 | MsG0780039075.01.T01:CDS | 30.0% | |
| GAAGAAAGAATGATTAGCAT+TGG | + | Chr7:57539187-57539206 | MsG0780039075.01.T01:CDS | 30.0% | |
| GTATCTTGGATGTGAAAATA+TGG | + | Chr7:57538196-57538215 | MsG0780039075.01.T01:CDS | 30.0% | |
| GTTAAAAAACCTGCTAAGAA+TGG | + | Chr7:57538077-57538096 | MsG0780039075.01.T01:CDS | 30.0% | |
| TAATTCCCAAAGGAAATCAT+AGG | + | Chr7:57538382-57538401 | MsG0780039075.01.T01:intron | 30.0% | |
| TCTAAATCCAATACATTGAC+AGG | - | Chr7:57538758-57538777 | None:intergenic | 30.0% | |
| TCTGTTACCATATATGTTGA+AGG | - | Chr7:57539088-57539107 | None:intergenic | 30.0% | |
| ! | AATTTTCACAGAAACTTCAG+TGG | - | Chr7:57537667-57537686 | None:intergenic | 30.0% |
| ! | ACCTTGACAAAGAGAATTTT+AGG | + | Chr7:57537865-57537884 | MsG0780039075.01.T01:CDS | 30.0% |
| ! | ATCTGAGATAAGAAAAGTTG+CGG | - | Chr7:57538117-57538136 | None:intergenic | 30.0% |
| !! | AAGTTGAGGTCTTTTAATTG+TGG | + | Chr7:57537978-57537997 | MsG0780039075.01.T01:CDS | 30.0% |
| !! | GATTTAGATTTTGGTAGCAT+GGG | + | Chr7:57538770-57538789 | MsG0780039075.01.T01:CDS | 30.0% |
| !!! | AAAGTTTTATTTGTCCAAGC+AGG | + | Chr7:57537708-57537727 | MsG0780039075.01.T01:CDS | 30.0% |
| !!! | AAGTTTTATTTGTCCAAGCA+GGG | + | Chr7:57537709-57537728 | MsG0780039075.01.T01:CDS | 30.0% |
| !!! | TAATTTTTTTGTGGAACTGC+AGG | + | Chr7:57539280-57539299 | MsG0780039075.01.T01:intron | 30.0% |
| AAGGGGAACAATAGAAGTAA+AGG | + | Chr7:57538805-57538824 | MsG0780039075.01.T01:CDS | 35.0% | |
| CAAAGCAATTGAAGTTACGT+AGG | - | Chr7:57537638-57537657 | None:intergenic | 35.0% | |
| CAAGAGTCCTTCAACATATA+TGG | + | Chr7:57539078-57539097 | MsG0780039075.01.T01:CDS | 35.0% | |
| GGAGTTGAGAACATGTTAAA+TGG | + | Chr7:57538923-57538942 | MsG0780039075.01.T01:CDS | 35.0% | |
| ! | ATTCAAGAGCATGGTTGATT+TGG | + | Chr7:57538976-57538995 | MsG0780039075.01.T01:CDS | 35.0% |
| ! | ATTTAGTGAAGTGCTCCTTA+TGG | + | Chr7:57538672-57538691 | MsG0780039075.01.T01:CDS | 35.0% |
| ! | GGTTCGACCAATTAATTTGA+TGG | + | Chr7:57537911-57537930 | MsG0780039075.01.T01:CDS | 35.0% |
| ! | TCATCATCAGCTCTAACTAT+TGG | + | Chr7:57539332-57539351 | MsG0780039075.01.T01:CDS | 35.0% |
| ! | TGTAATCTCCTAGGATTAGT+AGG | - | Chr7:57538417-57538436 | None:intergenic | 35.0% |
| ! | TTGATGACACAGAAAAGTTG+AGG | + | Chr7:57537964-57537983 | MsG0780039075.01.T01:CDS | 35.0% |
| ! | TTGTCATTGGTTGCAAGAAA+TGG | - | Chr7:57539365-57539384 | None:intergenic | 35.0% |
| !! | GATTAGCATTGGCAATAAAG+AGG | + | Chr7:57539198-57539217 | MsG0780039075.01.T01:CDS | 35.0% |
| !! | GGATTTAGATTTTGGTAGCA+TGG | + | Chr7:57538769-57538788 | MsG0780039075.01.T01:CDS | 35.0% |
| !! | GTTTCTCTTCTGAAGTATCT+TGG | + | Chr7:57538182-57538201 | MsG0780039075.01.T01:CDS | 35.0% |
| !!! | TGCTAAGAATGGTTTTGTTC+CGG | + | Chr7:57538088-57538107 | MsG0780039075.01.T01:CDS | 35.0% |
| ACCAAGACCTGTCAATGTAT+TGG | + | Chr7:57538748-57538767 | MsG0780039075.01.T01:CDS | 40.0% | |
| ACTAGTATGCCTGAACTTCT+TGG | - | Chr7:57538545-57538564 | None:intergenic | 40.0% | |
| AGTCAGAAAGGAAATCGCAT+CGG | - | Chr7:57539140-57539159 | None:intergenic | 40.0% | |
| AGTCTTGCAATAGTGCCTAA+TGG | - | Chr7:57537774-57537793 | None:intergenic | 40.0% | |
| ATAAGAAAAGTTGCGGTCAC+CGG | - | Chr7:57538110-57538129 | None:intergenic | 40.0% | |
| ATTGTCCACCTACTAATCCT+AGG | + | Chr7:57538406-57538425 | MsG0780039075.01.T01:intron | 40.0% | |
| CATGATTTCCCAAGAAGTTC+AGG | + | Chr7:57538533-57538552 | MsG0780039075.01.T01:intron | 40.0% | |
| CTAGTATGCCTGAACTTCTT+GGG | - | Chr7:57538544-57538563 | None:intergenic | 40.0% | |
| CTTCTATTGTTCCCCTTACA+AGG | - | Chr7:57538802-57538821 | None:intergenic | 40.0% | |
| CTTTCTTCCAAATCAGAGAG+AGG | - | Chr7:57539175-57539194 | None:intergenic | 40.0% | |
| GACAAGAATACGTCTGTTAG+AGG | - | Chr7:57538707-57538726 | None:intergenic | 40.0% | |
| GACTGTTGATATCACTCGTA+AGG | + | Chr7:57538235-57538254 | MsG0780039075.01.T01:CDS | 40.0% | |
| GAGAATTCCTCTCTCTGATT+TGG | + | Chr7:57539165-57539184 | MsG0780039075.01.T01:CDS | 40.0% | |
| GGAACAAAACCATTCTTAGC+AGG | - | Chr7:57538089-57538108 | None:intergenic | 40.0% | |
| TCACAGAAACTTCAGTGGAT+GGG | - | Chr7:57537662-57537681 | None:intergenic | 40.0% | |
| TCCAATACATTGACAGGTCT+TGG | - | Chr7:57538752-57538771 | None:intergenic | 40.0% | |
| TGTTGATATCACTCGTAAGG+AGG | + | Chr7:57538238-57538257 | MsG0780039075.01.T01:CDS | 40.0% | |
| TTCACAGAAACTTCAGTGGA+TGG | - | Chr7:57537663-57537682 | None:intergenic | 40.0% | |
| TTTATTTGTCCAAGCAGGGA+AGG | + | Chr7:57537713-57537732 | MsG0780039075.01.T01:CDS | 40.0% | |
| ! | AATCTCCTAGGATTAGTAGG+TGG | - | Chr7:57538414-57538433 | None:intergenic | 40.0% |
| ! | TCAGCTCTAACTATTGGTCT+TGG | + | Chr7:57539338-57539357 | MsG0780039075.01.T01:CDS | 40.0% |
| ! | TTTTTGACATTCCCTTTGGG+AGG | + | Chr7:57538902-57538921 | MsG0780039075.01.T01:CDS | 40.0% |
| ATGTTCTCAACTCCTCCCAA+AGG | - | Chr7:57538917-57538936 | None:intergenic | 45.0% | |
| CACAGAAACTTCAGTGGATG+GGG | - | Chr7:57537661-57537680 | None:intergenic | 45.0% | |
| GATGACTTAGTCATCACACC+AGG | + | Chr7:57539106-57539125 | MsG0780039075.01.T01:CDS | 45.0% | |
| TGTTCTCAACTCCTCCCAAA+GGG | - | Chr7:57538916-57538935 | None:intergenic | 45.0% | |
| ! | AAAGGAAATCGCATCGGTAG+AGG | - | Chr7:57539134-57539153 | None:intergenic | 45.0% |
| ! | AGTGAAGTGCTCCTTATGGT+CGG | + | Chr7:57538676-57538695 | MsG0780039075.01.T01:CDS | 45.0% |
| ! | TCTGTATGCTTTGGGTGAAG+AGG | + | Chr7:57538856-57538875 | MsG0780039075.01.T01:CDS | 45.0% |
| CAACAAAGTCCTTCCCTGCT+TGG | - | Chr7:57537725-57537744 | None:intergenic | 50.0% | |
| CAGTAGCAGCTTCGCTTCTT+AGG | - | Chr7:57538026-57538045 | None:intergenic | 50.0% | |
| ! | ATGGGAGCACACCTTGTAAG+GGG | + | Chr7:57538788-57538807 | MsG0780039075.01.T01:CDS | 50.0% |
| ! | CATGGGAGCACACCTTGTAA+GGG | + | Chr7:57538787-57538806 | MsG0780039075.01.T01:CDS | 50.0% |
| ! | ATCGCATCGGTAGAGGAACC+TGG | - | Chr7:57539127-57539146 | None:intergenic | 55.0% |
| ! | GCATGGGAGCACACCTTGTA+AGG | + | Chr7:57538786-57538805 | MsG0780039075.01.T01:CDS | 55.0% |
| !! | TAGAGGTGTCGCCGACCATA+AGG | - | Chr7:57538690-57538709 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 57537624 | 57539400 | 57537624 | ID=MsG0780039075.01;Name=MsG0780039075.01 |
| Chr7 | mRNA | 57537624 | 57539400 | 57537624 | ID=MsG0780039075.01.T01;Parent=MsG0780039075.01;Name=MsG0780039075.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|3|0|429 |
| Chr7 | exon | 57537624 | 57538259 | 57537624 | ID=MsG0780039075.01.T01:exon:32533;Parent=MsG0780039075.01.T01 |
| Chr7 | exon | 57538665 | 57539219 | 57538665 | ID=MsG0780039075.01.T01:exon:32534;Parent=MsG0780039075.01.T01 |
| Chr7 | exon | 57539302 | 57539400 | 57539302 | ID=MsG0780039075.01.T01:exon:32535;Parent=MsG0780039075.01.T01 |
| Chr7 | CDS | 57537624 | 57538259 | 57537624 | ID=MsG0780039075.01.T01:cds;Parent=MsG0780039075.01.T01 |
| Chr7 | CDS | 57538665 | 57539219 | 57538665 | ID=MsG0780039075.01.T01:cds;Parent=MsG0780039075.01.T01 |
| Chr7 | CDS | 57539302 | 57539400 | 57539302 | ID=MsG0780039075.01.T01:cds;Parent=MsG0780039075.01.T01 |
| Gene Sequence |
| Protein sequence |
