Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039722.01.T01 | XP_003624010.1 | 95.402 | 348 | 16 | 0 | 1 | 348 | 115 | 462 | 0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039722.01.T01 | Q9FLW0 | 44.086 | 279 | 145 | 7 | 1 | 275 | 121 | 392 | 4.43E-61 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039722.01.T01 | Q2HUD4 | 95.402 | 348 | 16 | 0 | 1 | 348 | 115 | 462 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048018.01 | MsG0780039722.01 | 0.817457 | 3.265931e-52 | 2.379741e-49 |
| MsG0180005018.01 | MsG0780039722.01 | 0.811628 | 6.365787e-51 | 3.960053e-48 |
| MsG0180006061.01 | MsG0780039722.01 | 0.863742 | 2.003521e-64 | 6.140167e-61 |
| MsG0480021900.01 | MsG0780039722.01 | 0.814672 | 1.367334e-51 | 9.232731e-49 |
| MsG0580024323.01 | MsG0780039722.01 | 0.803512 | 3.364811e-49 | 1.694178e-46 |
| MsG0580025103.01 | MsG0780039722.01 | 0.804839 | 1.781936e-49 | 9.283851e-47 |
| MsG0780039722.01 | MsG0880046560.01 | 0.805302 | 1.425552e-49 | 7.515430e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039722.01.T01 | MTR_7g078220 | 95.402 | 348 | 16 | 0 | 1 | 348 | 115 | 462 | 0.0 | 676 |
| MsG0780039722.01.T01 | MTR_6g048090 | 43.509 | 285 | 147 | 8 | 1 | 277 | 118 | 396 | 1.43e-61 | 210 |
| MsG0780039722.01.T01 | MTR_1g100110 | 40.925 | 281 | 155 | 7 | 1 | 277 | 132 | 405 | 3.37e-61 | 209 |
| MsG0780039722.01.T01 | MTR_2g080220 | 38.571 | 350 | 195 | 11 | 1 | 341 | 119 | 457 | 5.81e-53 | 187 |
| MsG0780039722.01.T01 | MTR_4g061833 | 40.647 | 278 | 155 | 6 | 1 | 277 | 125 | 393 | 1.84e-50 | 180 |
| MsG0780039722.01.T01 | MTR_4g061930 | 40.647 | 278 | 155 | 6 | 1 | 277 | 125 | 393 | 1.84e-50 | 180 |
| MsG0780039722.01.T01 | MTR_2g096160 | 36.066 | 366 | 199 | 13 | 1 | 348 | 124 | 472 | 3.64e-49 | 176 |
| MsG0780039722.01.T01 | MTR_4g061833 | 42.041 | 245 | 136 | 5 | 34 | 277 | 3 | 242 | 6.02e-48 | 172 |
| MsG0780039722.01.T01 | MTR_4g109010 | 33.140 | 344 | 209 | 9 | 6 | 343 | 148 | 476 | 2.92e-47 | 172 |
| MsG0780039722.01.T01 | MTR_8g037700 | 36.111 | 288 | 174 | 6 | 1 | 285 | 151 | 431 | 1.18e-46 | 169 |
| MsG0780039722.01.T01 | MTR_4g095012 | 33.793 | 290 | 167 | 14 | 1 | 275 | 117 | 396 | 9.57e-32 | 126 |
| MsG0780039722.01.T01 | MTR_4g095022 | 33.910 | 289 | 167 | 12 | 1 | 275 | 118 | 396 | 1.05e-30 | 122 |
| MsG0780039722.01.T01 | MTR_1g080740 | 31.597 | 288 | 172 | 12 | 6 | 278 | 121 | 398 | 4.68e-28 | 115 |
| MsG0780039722.01.T01 | MTR_4g095018 | 31.633 | 294 | 164 | 13 | 1 | 275 | 123 | 398 | 2.88e-27 | 112 |
| MsG0780039722.01.T01 | MTR_4g095042 | 31.229 | 301 | 177 | 12 | 1 | 285 | 118 | 404 | 2.89e-27 | 113 |
| MsG0780039722.01.T01 | MTR_8g467150 | 29.643 | 280 | 162 | 11 | 4 | 277 | 126 | 376 | 2.76e-26 | 110 |
| MsG0780039722.01.T01 | MTR_4g095032 | 28.920 | 287 | 161 | 10 | 1 | 275 | 116 | 371 | 7.31e-26 | 109 |
| MsG0780039722.01.T01 | MTR_7g115300 | 29.965 | 287 | 183 | 10 | 6 | 281 | 132 | 411 | 2.31e-25 | 107 |
| MsG0780039722.01.T01 | MTR_4g111925 | 29.180 | 305 | 184 | 11 | 4 | 284 | 128 | 424 | 1.22e-24 | 105 |
| MsG0780039722.01.T01 | MTR_7g073660 | 29.508 | 305 | 183 | 12 | 4 | 284 | 128 | 424 | 1.53e-24 | 105 |
| MsG0780039722.01.T01 | MTR_5g047120 | 28.814 | 295 | 186 | 12 | 6 | 282 | 137 | 425 | 4.44e-24 | 103 |
| MsG0780039722.01.T01 | MTR_5g047110 | 26.979 | 341 | 220 | 10 | 34 | 347 | 161 | 499 | 7.11e-24 | 103 |
| MsG0780039722.01.T01 | MTR_7g015390 | 31.132 | 318 | 175 | 15 | 1 | 284 | 132 | 439 | 8.24e-24 | 103 |
| MsG0780039722.01.T01 | MTR_7g078200 | 82.353 | 51 | 9 | 0 | 176 | 226 | 1 | 51 | 2.66e-22 | 90.1 |
| MsG0780039722.01.T01 | MTR_5g047060 | 26.453 | 344 | 218 | 13 | 34 | 347 | 162 | 500 | 1.16e-21 | 96.7 |
| MsG0780039722.01.T01 | MTR_7g015230 | 29.819 | 332 | 189 | 18 | 34 | 325 | 169 | 496 | 3.03e-21 | 95.5 |
| MsG0780039722.01.T01 | MTR_7g015310 | 29.560 | 318 | 183 | 15 | 42 | 324 | 174 | 485 | 1.28e-20 | 93.6 |
| MsG0780039722.01.T01 | MTR_1g040077 | 28.000 | 300 | 179 | 13 | 44 | 321 | 109 | 393 | 3.20e-20 | 92.0 |
| MsG0780039722.01.T01 | MTR_1g040073 | 27.645 | 293 | 177 | 12 | 49 | 321 | 116 | 393 | 3.63e-20 | 92.0 |
| MsG0780039722.01.T01 | MTR_7g015250 | 28.056 | 360 | 192 | 17 | 28 | 346 | 157 | 490 | 7.74e-20 | 91.3 |
| MsG0780039722.01.T01 | MTR_2g030310 | 25.496 | 353 | 227 | 8 | 4 | 331 | 122 | 463 | 9.00e-20 | 91.3 |
| MsG0780039722.01.T01 | MTR_2g030310 | 25.424 | 354 | 228 | 8 | 3 | 331 | 121 | 463 | 1.03e-19 | 90.9 |
| MsG0780039722.01.T01 | MTR_7g015280 | 29.276 | 304 | 184 | 14 | 34 | 316 | 164 | 457 | 1.18e-19 | 90.9 |
| MsG0780039722.01.T01 | MTR_7g015320 | 29.042 | 334 | 189 | 17 | 3 | 296 | 132 | 457 | 2.03e-19 | 90.1 |
| MsG0780039722.01.T01 | MTR_7g015420 | 26.685 | 371 | 218 | 17 | 11 | 340 | 140 | 497 | 2.47e-19 | 89.7 |
| MsG0780039722.01.T01 | MTR_7g015670 | 27.726 | 321 | 186 | 14 | 34 | 316 | 165 | 477 | 2.67e-19 | 89.7 |
| MsG0780039722.01.T01 | MTR_7g015620 | 27.812 | 320 | 196 | 15 | 34 | 322 | 160 | 475 | 3.06e-19 | 89.4 |
| MsG0780039722.01.T01 | MTR_6g015805 | 26.519 | 362 | 228 | 18 | 4 | 331 | 126 | 483 | 2.40e-17 | 84.0 |
| MsG0780039722.01.T01 | MTR_7g015240 | 26.571 | 350 | 212 | 14 | 4 | 315 | 132 | 474 | 4.53e-17 | 82.8 |
| MsG0780039722.01.T01 | MTR_5g047070 | 37.037 | 135 | 76 | 4 | 153 | 282 | 54 | 184 | 6.50e-17 | 82.0 |
| MsG0780039722.01.T01 | MTR_4g095045 | 29.185 | 233 | 113 | 11 | 62 | 275 | 1 | 200 | 1.49e-14 | 75.1 |
| MsG0780039722.01.T01 | MTR_6g015795 | 25.680 | 331 | 211 | 16 | 4 | 307 | 126 | 448 | 2.07e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039722.01.T01 | AT4G00300 | 53.933 | 356 | 149 | 8 | 1 | 347 | 119 | 468 | 2.01e-114 | 340 |
| MsG0780039722.01.T01 | AT5G24010 | 44.086 | 279 | 145 | 7 | 1 | 275 | 121 | 392 | 4.51e-62 | 212 |
| MsG0780039722.01.T01 | AT2G21480 | 36.364 | 308 | 186 | 6 | 1 | 306 | 144 | 443 | 1.63e-49 | 177 |
| MsG0780039722.01.T01 | AT4G39110 | 38.754 | 289 | 166 | 7 | 1 | 285 | 145 | 426 | 7.39e-49 | 176 |
| MsG0780039722.01.T01 | AT3G46290 | 37.102 | 283 | 168 | 5 | 1 | 282 | 114 | 387 | 3.01e-48 | 174 |
| MsG0780039722.01.T01 | AT5G59700 | 37.857 | 280 | 163 | 5 | 4 | 282 | 117 | 386 | 1.09e-47 | 172 |
| MsG0780039722.01.T01 | AT5G54380 | 40.392 | 255 | 140 | 7 | 34 | 284 | 150 | 396 | 6.38e-47 | 170 |
| MsG0780039722.01.T01 | AT5G61350 | 37.549 | 253 | 152 | 5 | 34 | 284 | 156 | 404 | 7.99e-47 | 170 |
| MsG0780039722.01.T01 | AT2G23200 | 35.802 | 324 | 167 | 16 | 30 | 340 | 154 | 449 | 1.96e-32 | 128 |
| MsG0780039722.01.T01 | AT2G39360 | 29.179 | 329 | 211 | 12 | 1 | 321 | 114 | 428 | 1.08e-31 | 126 |
| MsG0780039722.01.T01 | AT5G39000 | 30.571 | 350 | 193 | 14 | 6 | 320 | 126 | 460 | 3.36e-30 | 122 |
| MsG0780039722.01.T01 | AT5G38990 | 31.457 | 302 | 171 | 11 | 6 | 284 | 124 | 412 | 8.07e-27 | 112 |
| MsG0780039722.01.T01 | AT3G51550 | 30.847 | 295 | 182 | 13 | 6 | 284 | 130 | 418 | 9.61e-27 | 112 |
| MsG0780039722.01.T01 | AT5G39020 | 32.890 | 301 | 162 | 13 | 6 | 282 | 123 | 407 | 3.38e-25 | 107 |
| MsG0780039722.01.T01 | AT1G30570 | 31.707 | 246 | 162 | 5 | 32 | 276 | 165 | 405 | 3.61e-25 | 107 |
| MsG0780039722.01.T01 | AT5G39030 | 30.508 | 295 | 166 | 12 | 8 | 278 | 118 | 397 | 3.76e-23 | 101 |
| MsG0780039722.01.T01 | AT5G39030 | 30.508 | 295 | 166 | 12 | 8 | 278 | 124 | 403 | 4.38e-23 | 100 |
| MsG0780039722.01.T01 | AT3G04690 | 28.477 | 302 | 177 | 13 | 6 | 284 | 120 | 405 | 4.42e-22 | 98.2 |
| MsG0780039722.01.T01 | AT5G28680 | 25.410 | 366 | 230 | 13 | 6 | 339 | 121 | 475 | 2.94e-21 | 95.5 |
| MsG0780039722.01.T01 | AT5G28680 | 25.410 | 366 | 230 | 13 | 6 | 339 | 121 | 475 | 2.94e-21 | 95.5 |
Find 80 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTAGTTGAATATCTTATT+TGG | 0.197117 | 7:-68120545 | MsG0780039722.01.T01:CDS |
| AAATTTCAAATCTTGGTTAA+TGG | 0.198971 | 7:-68120624 | MsG0780039722.01.T01:CDS |
| TGTTTATGTGAATGGTTATT+TGG | 0.203401 | 7:-68120013 | MsG0780039722.01.T01:CDS |
| TGGAGATGTTTGTGCTAATT+TGG | 0.258614 | 7:-68119788 | MsG0780039722.01.T01:CDS |
| AATTTCAAATCTTGGTTAAT+GGG | 0.276201 | 7:-68120623 | MsG0780039722.01.T01:CDS |
| TAATATGACTTGGGTGTTTC+CGG | 0.278909 | 7:-68120115 | MsG0780039722.01.T01:CDS |
| TCATGCTAAATTTCAAATCT+TGG | 0.284673 | 7:-68120631 | MsG0780039722.01.T01:CDS |
| CTCGACAAGGAATCATTAAA+AGG | 0.310143 | 7:+68120309 | None:intergenic |
| TCATTAAAAGGTGTAACTTT+AGG | 0.316619 | 7:+68120321 | None:intergenic |
| TACACTGACTTTGTTGTTGA+TGG | 0.325777 | 7:-68119937 | MsG0780039722.01.T01:CDS |
| ATGATTCCTTGTCGAGGACT+TGG | 0.353648 | 7:-68120302 | MsG0780039722.01.T01:CDS |
| GGTAGTTGAATATCTTATTT+GGG | 0.365440 | 7:-68120544 | MsG0780039722.01.T01:CDS |
| GACTTGGGTGTTTCCGGTTG+TGG | 0.379082 | 7:-68120109 | MsG0780039722.01.T01:CDS |
| CAACAAAGTCAGTGTAAAAC+GGG | 0.379225 | 7:+68119944 | None:intergenic |
| TATTTCAATGTTTATGTGAA+TGG | 0.386805 | 7:-68120021 | MsG0780039722.01.T01:CDS |
| CTCTTTAGTTACAAATGTGC+TGG | 0.400084 | 7:-68119971 | MsG0780039722.01.T01:CDS |
| ACTTGGGTGTTTCCGGTTGT+GGG | 0.401467 | 7:-68120108 | MsG0780039722.01.T01:CDS |
| TTGATGGGGATAGTAGTGTT+GGG | 0.402822 | 7:-68119921 | MsG0780039722.01.T01:CDS |
| GTGGATATAAGTACCTTGTT+AGG | 0.405845 | 7:-68120086 | MsG0780039722.01.T01:CDS |
| AATCCTCCTGCGAATCACTA+TGG | 0.408045 | 7:+68119684 | None:intergenic |
| AAGGTTGCCTGTGAATTTAT+CGG | 0.415273 | 7:-68119632 | MsG0780039722.01.T01:CDS |
| AGCCTTGCACACGTCGTTGA+TGG | 0.426222 | 7:-68119865 | MsG0780039722.01.T01:CDS |
| ACACTGACTTTGTTGTTGAT+GGG | 0.427035 | 7:-68119936 | MsG0780039722.01.T01:CDS |
| AATACTCACAGGAGTCTTGA+TGG | 0.427671 | 7:-68119808 | MsG0780039722.01.T01:CDS |
| TCACCGGTCAAGTGGAAATA+CGG | 0.429928 | 7:-68119755 | MsG0780039722.01.T01:CDS |
| AGTCAAGGGAAACTGTATTA+TGG | 0.439463 | 7:-68119657 | MsG0780039722.01.T01:CDS |
| TGCACCTAAAGACCTTGTTC+CGG | 0.444781 | 7:-68120439 | MsG0780039722.01.T01:CDS |
| GTTGATGGGGATAGTAGTGT+TGG | 0.446155 | 7:-68119922 | MsG0780039722.01.T01:CDS |
| GGGGCTTTGAATGTTAGTAT+AGG | 0.447479 | 7:-68119901 | MsG0780039722.01.T01:CDS |
| TACTTATATCCACCCACAAC+CGG | 0.450341 | 7:+68120096 | None:intergenic |
| GTCTCCGGAACAAGGTCTTT+AGG | 0.451946 | 7:+68120435 | None:intergenic |
| ACAACAAAGTCAGTGTAAAA+CGG | 0.468464 | 7:+68119943 | None:intergenic |
| GGTAGGATTAATTATCAAGT+TGG | 0.469309 | 7:-68120222 | MsG0780039722.01.T01:CDS |
| GCCGTGTTGTAAACATTATC+CGG | 0.478278 | 7:+68120177 | None:intergenic |
| TATTTGGGTTGATTATGAAA+AGG | 0.481321 | 7:-68120529 | MsG0780039722.01.T01:CDS |
| TTATCGGAGGACAACGTAAA+GGG | 0.481337 | 7:-68119616 | MsG0780039722.01.T01:CDS |
| ATAAGATATTCAACTACCCT+AGG | 0.481949 | 7:+68120549 | None:intergenic |
| ACCCAAGTCATATTAACATT+CGG | 0.491134 | 7:+68120123 | None:intergenic |
| GGATTAATTATCAAGTTGGT+GGG | 0.493819 | 7:-68120218 | MsG0780039722.01.T01:CDS |
| CGGCTAGGTTGATTAAAAGT+AGG | 0.495465 | 7:-68120158 | MsG0780039722.01.T01:CDS |
| TGATGGGGATAGTAGTGTTG+GGG | 0.498218 | 7:-68119920 | MsG0780039722.01.T01:CDS |
| TACCCGTATTTCCACTTGAC+CGG | 0.501628 | 7:+68119752 | None:intergenic |
| GTTTATCCATAGTGATTCGC+AGG | 0.518645 | 7:-68119690 | MsG0780039722.01.T01:CDS |
| GGTTGAGATTGTATTTGTGC+CGG | 0.518698 | 7:-68120508 | MsG0780039722.01.T01:CDS |
| TGATTCCTTGTCGAGGACTT+GGG | 0.524303 | 7:-68120301 | MsG0780039722.01.T01:CDS |
| GTTTATAGGGTTACAGTTGG+CGG | 0.526407 | 7:-68120345 | MsG0780039722.01.T01:CDS |
| CACTGACTTTGTTGTTGATG+GGG | 0.527237 | 7:-68119935 | MsG0780039722.01.T01:CDS |
| GGTGGGGCGAGTCGTGAGGT+TGG | 0.527545 | 7:-68120201 | MsG0780039722.01.T01:CDS |
| TTTATCGGAGGACAACGTAA+AGG | 0.530778 | 7:-68119617 | MsG0780039722.01.T01:CDS |
| AGGATTAATTATCAAGTTGG+TGG | 0.537150 | 7:-68120219 | MsG0780039722.01.T01:CDS |
| CAGGAGGATTGTTGAGTCAA+GGG | 0.543412 | 7:-68119671 | MsG0780039722.01.T01:CDS |
| GGCGAGTCGTGAGGTTGGAC+CGG | 0.545709 | 7:-68120196 | MsG0780039722.01.T01:CDS |
| GCAGGAGGATTGTTGAGTCA+AGG | 0.546633 | 7:-68119672 | MsG0780039722.01.T01:CDS |
| CACAGAAATGCAACCTAACA+AGG | 0.547260 | 7:+68120073 | None:intergenic |
| CACCGGTCAAGTGGAAATAC+GGG | 0.553277 | 7:-68119754 | MsG0780039722.01.T01:CDS |
| TACCATCAACGACGTGTGCA+AGG | 0.554779 | 7:+68119863 | None:intergenic |
| GTTGTTTATAGGGTTACAGT+TGG | 0.556248 | 7:-68120348 | MsG0780039722.01.T01:CDS |
| TGGGTGTTTCCGGTTGTGGG+TGG | 0.559642 | 7:-68120105 | MsG0780039722.01.T01:CDS |
| CTCAATAGTCACCGGTCAAG+TGG | 0.560596 | 7:-68119763 | MsG0780039722.01.T01:CDS |
| TGCCGAATGTTAATATGACT+TGG | 0.560741 | 7:-68120125 | MsG0780039722.01.T01:CDS |
| GGGAAACTGTATTATGGTCA+AGG | 0.572463 | 7:-68119651 | MsG0780039722.01.T01:CDS |
| ACTGTGCTGTCTCCGGAACA+AGG | 0.574826 | 7:+68120427 | None:intergenic |
| TGTGCAAGGCTGCTCTTCGA+AGG | 0.576874 | 7:+68119877 | None:intergenic |
| ATTTGGTTCTCAATAGTCAC+CGG | 0.584130 | 7:-68119771 | MsG0780039722.01.T01:CDS |
| TGCGTTTGTGAATGCTATTG+AGG | 0.584323 | 7:-68120469 | MsG0780039722.01.T01:CDS |
| TTGTCCTCCGATAAATTCAC+AGG | 0.592735 | 7:+68119625 | None:intergenic |
| ATAATGTTTACAACACGGCT+AGG | 0.595728 | 7:-68120173 | MsG0780039722.01.T01:CDS |
| TGGTATGTTGAATGCAGTTG+AGG | 0.601485 | 7:-68119845 | MsG0780039722.01.T01:CDS |
| AGTTGGTGGGGCGAGTCGTG+AGG | 0.601806 | 7:-68120205 | MsG0780039722.01.T01:CDS |
| TAAGATATTCAACTACCCTA+GGG | 0.606006 | 7:+68120550 | None:intergenic |
| TGAAGTTGAACAATACTCAC+AGG | 0.624608 | 7:-68119819 | MsG0780039722.01.T01:CDS |
| TATCCATAGTGATTCGCAGG+AGG | 0.632684 | 7:-68119687 | MsG0780039722.01.T01:CDS |
| GATTAATTATCAAGTTGGTG+GGG | 0.635486 | 7:-68120217 | MsG0780039722.01.T01:CDS |
| ACCGGATAATGTTTACAACA+CGG | 0.656874 | 7:-68120178 | MsG0780039722.01.T01:CDS |
| GTTTGTGAATGCTATTGAGG+TGG | 0.658422 | 7:-68120466 | MsG0780039722.01.T01:CDS |
| GCCGAATGTTAATATGACTT+GGG | 0.659628 | 7:-68120124 | MsG0780039722.01.T01:CDS |
| GTTGCCTGTGAATTTATCGG+AGG | 0.674041 | 7:-68119629 | MsG0780039722.01.T01:CDS |
| AGTAACCCAAGTCCTCGACA+AGG | 0.713056 | 7:+68120296 | None:intergenic |
| ATATTGCTAGCATTTCGATG+CGG | 0.754511 | 7:-68120050 | MsG0780039722.01.T01:CDS |
| AACAAAGTCAGTGTAAAACG+GGG | 0.757884 | 7:+68119945 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCAAATCTTGGTTAA+TGG | - | Chr7:68119624-68119643 | MsG0780039722.01.T01:CDS | 20.0% |
| !! | AATTTCAAATCTTGGTTAAT+GGG | - | Chr7:68119625-68119644 | MsG0780039722.01.T01:CDS | 20.0% |
| !! | TATTTCAATGTTTATGTGAA+TGG | - | Chr7:68120227-68120246 | MsG0780039722.01.T01:CDS | 20.0% |
| ! | TCATGCTAAATTTCAAATCT+TGG | - | Chr7:68119617-68119636 | MsG0780039722.01.T01:CDS | 25.0% |
| ! | TGTTTATGTGAATGGTTATT+TGG | - | Chr7:68120235-68120254 | MsG0780039722.01.T01:CDS | 25.0% |
| !! | GCAAAATTCAAATCTTTTTC+CGG | + | Chr7:68119762-68119781 | None:intergenic | 25.0% |
| !! | GGTAGTTGAATATCTTATTT+GGG | - | Chr7:68119704-68119723 | MsG0780039722.01.T01:CDS | 25.0% |
| !! | TCATTAAAAGGTGTAACTTT+AGG | + | Chr7:68119930-68119949 | None:intergenic | 25.0% |
| !!! | AAGCTTTTGAAGTTGTTTAT+AGG | - | Chr7:68119889-68119908 | MsG0780039722.01.T01:CDS | 25.0% |
| !!! | AGCTTTTGAAGTTGTTTATA+GGG | - | Chr7:68119890-68119909 | MsG0780039722.01.T01:CDS | 25.0% |
| !!! | AGTTTTTGAAATCAAGTGTT+GGG | - | Chr7:68119982-68120001 | MsG0780039722.01.T01:CDS | 25.0% |
| !!! | TATTTGGGTTGATTATGAAA+AGG | - | Chr7:68119719-68119738 | MsG0780039722.01.T01:CDS | 25.0% |
| ACAACAAAGTCAGTGTAAAA+CGG | + | Chr7:68120308-68120327 | None:intergenic | 30.0% | |
| ACCCAAGTCATATTAACATT+CGG | + | Chr7:68120128-68120147 | None:intergenic | 30.0% | |
| ATAAGATATTCAACTACCCT+AGG | + | Chr7:68119702-68119721 | None:intergenic | 30.0% | |
| GGGTAGTTGAATATCTTATT+TGG | - | Chr7:68119703-68119722 | MsG0780039722.01.T01:CDS | 30.0% | |
| GGTAGGATTAATTATCAAGT+TGG | - | Chr7:68120026-68120045 | MsG0780039722.01.T01:CDS | 30.0% | |
| TAAGATATTCAACTACCCTA+GGG | + | Chr7:68119701-68119720 | None:intergenic | 30.0% | |
| !! | AGGATTAATTATCAAGTTGG+TGG | - | Chr7:68120029-68120048 | MsG0780039722.01.T01:CDS | 30.0% |
| !! | GATTAATTATCAAGTTGGTG+GGG | - | Chr7:68120031-68120050 | MsG0780039722.01.T01:CDS | 30.0% |
| !! | GGATTAATTATCAAGTTGGT+GGG | - | Chr7:68120030-68120049 | MsG0780039722.01.T01:CDS | 30.0% |
| !!! | GAGTTTTTGAAATCAAGTGT+TGG | - | Chr7:68119981-68120000 | MsG0780039722.01.T01:CDS | 30.0% |
| !!! | GGTCTGAGAAGTTTTATTTT+GGG | - | Chr7:68120003-68120022 | MsG0780039722.01.T01:CDS | 30.0% |
| !!! | GTCTGAGAAGTTTTATTTTG+GGG | - | Chr7:68120004-68120023 | MsG0780039722.01.T01:CDS | 30.0% |
| !!! | TCTGAGAAGTTTTATTTTGG+GGG | - | Chr7:68120005-68120024 | MsG0780039722.01.T01:CDS | 30.0% |
| AACAAAGTCAGTGTAAAACG+GGG | + | Chr7:68120306-68120325 | None:intergenic | 35.0% | |
| AAGGTTGCCTGTGAATTTAT+CGG | - | Chr7:68120616-68120635 | MsG0780039722.01.T01:CDS | 35.0% | |
| ACCGGATAATGTTTACAACA+CGG | - | Chr7:68120070-68120089 | MsG0780039722.01.T01:CDS | 35.0% | |
| AGTCAAGGGAAACTGTATTA+TGG | - | Chr7:68120591-68120610 | MsG0780039722.01.T01:CDS | 35.0% | |
| ATAATGTTTACAACACGGCT+AGG | - | Chr7:68120075-68120094 | MsG0780039722.01.T01:CDS | 35.0% | |
| ATATTGCTAGCATTTCGATG+CGG | - | Chr7:68120198-68120217 | MsG0780039722.01.T01:CDS | 35.0% | |
| CAACAAAGTCAGTGTAAAAC+GGG | + | Chr7:68120307-68120326 | None:intergenic | 35.0% | |
| CTCGACAAGGAATCATTAAA+AGG | + | Chr7:68119942-68119961 | None:intergenic | 35.0% | |
| CTCTTTAGTTACAAATGTGC+TGG | - | Chr7:68120277-68120296 | MsG0780039722.01.T01:CDS | 35.0% | |
| GCCGAATGTTAATATGACTT+GGG | - | Chr7:68120124-68120143 | MsG0780039722.01.T01:CDS | 35.0% | |
| GTGGATATAAGTACCTTGTT+AGG | - | Chr7:68120162-68120181 | MsG0780039722.01.T01:CDS | 35.0% | |
| GTTGTTTATAGGGTTACAGT+TGG | - | Chr7:68119900-68119919 | MsG0780039722.01.T01:CDS | 35.0% | |
| TGAAGTTGAACAATACTCAC+AGG | - | Chr7:68120429-68120448 | MsG0780039722.01.T01:CDS | 35.0% | |
| TGATTGTGTGAAAAACCCTA+GGG | - | Chr7:68119683-68119702 | MsG0780039722.01.T01:CDS | 35.0% | |
| TGCCGAATGTTAATATGACT+TGG | - | Chr7:68120123-68120142 | MsG0780039722.01.T01:CDS | 35.0% | |
| TGGAGATGTTTGTGCTAATT+TGG | - | Chr7:68120460-68120479 | MsG0780039722.01.T01:CDS | 35.0% | |
| ! | CTTTTAATGATTCCTTGTCG+AGG | - | Chr7:68119940-68119959 | MsG0780039722.01.T01:CDS | 35.0% |
| ! | TAATATGACTTGGGTGTTTC+CGG | - | Chr7:68120133-68120152 | MsG0780039722.01.T01:CDS | 35.0% |
| ! | TACGGGTATTTTGCTTACTT+TGG | - | Chr7:68120511-68120530 | MsG0780039722.01.T01:CDS | 35.0% |
| !! | ACACTGACTTTGTTGTTGAT+GGG | - | Chr7:68120312-68120331 | MsG0780039722.01.T01:CDS | 35.0% |
| !! | ATTTGGTTCTCAATAGTCAC+CGG | - | Chr7:68120477-68120496 | MsG0780039722.01.T01:CDS | 35.0% |
| !! | TACACTGACTTTGTTGTTGA+TGG | - | Chr7:68120311-68120330 | MsG0780039722.01.T01:CDS | 35.0% |
| !!! | AGAAGTTTTATTTTGGGGGT+AGG | - | Chr7:68120009-68120028 | MsG0780039722.01.T01:CDS | 35.0% |
| !!! | GGGTCTGAGAAGTTTTATTT+TGG | - | Chr7:68120002-68120021 | MsG0780039722.01.T01:CDS | 35.0% |
| AATACTCACAGGAGTCTTGA+TGG | - | Chr7:68120440-68120459 | MsG0780039722.01.T01:CDS | 40.0% | |
| CACAGAAATGCAACCTAACA+AGG | + | Chr7:68120178-68120197 | None:intergenic | 40.0% | |
| GCCGTGTTGTAAACATTATC+CGG | + | Chr7:68120074-68120093 | None:intergenic | 40.0% | |
| GGGAAACTGTATTATGGTCA+AGG | - | Chr7:68120597-68120616 | MsG0780039722.01.T01:CDS | 40.0% | |
| GGTTGAGATTGTATTTGTGC+CGG | - | Chr7:68119740-68119759 | MsG0780039722.01.T01:CDS | 40.0% | |
| GTGATTGTGTGAAAAACCCT+AGG | - | Chr7:68119682-68119701 | MsG0780039722.01.T01:CDS | 40.0% | |
| GTTTATAGGGTTACAGTTGG+CGG | - | Chr7:68119903-68119922 | MsG0780039722.01.T01:CDS | 40.0% | |
| GTTTATCCATAGTGATTCGC+AGG | - | Chr7:68120558-68120577 | MsG0780039722.01.T01:CDS | 40.0% | |
| GTTTGTGAATGCTATTGAGG+TGG | - | Chr7:68119782-68119801 | MsG0780039722.01.T01:CDS | 40.0% | |
| TACTTATATCCACCCACAAC+CGG | + | Chr7:68120155-68120174 | None:intergenic | 40.0% | |
| TGCGTTTGTGAATGCTATTG+AGG | - | Chr7:68119779-68119798 | MsG0780039722.01.T01:CDS | 40.0% | |
| TGGTATGTTGAATGCAGTTG+AGG | - | Chr7:68120403-68120422 | MsG0780039722.01.T01:CDS | 40.0% | |
| TTATCGGAGGACAACGTAAA+GGG | - | Chr7:68120632-68120651 | MsG0780039722.01.T01:CDS | 40.0% | |
| TTGATGGGGATAGTAGTGTT+GGG | - | Chr7:68120327-68120346 | MsG0780039722.01.T01:CDS | 40.0% | |
| TTGTCCTCCGATAAATTCAC+AGG | + | Chr7:68120626-68120645 | None:intergenic | 40.0% | |
| TTTATCGGAGGACAACGTAA+AGG | - | Chr7:68120631-68120650 | MsG0780039722.01.T01:CDS | 40.0% | |
| ! | GGGTATTTTGCTTACTTTGG+CGG | - | Chr7:68120514-68120533 | MsG0780039722.01.T01:CDS | 40.0% |
| !! | CACTGACTTTGTTGTTGATG+GGG | - | Chr7:68120313-68120332 | MsG0780039722.01.T01:CDS | 40.0% |
| !! | CGGCTAGGTTGATTAAAAGT+AGG | - | Chr7:68120090-68120109 | MsG0780039722.01.T01:CDS | 40.0% |
| !! | GGGGCTTTGAATGTTAGTAT+AGG | - | Chr7:68120347-68120366 | MsG0780039722.01.T01:CDS | 40.0% |
| !!! | AGCACAGTTTTTGAGTGAAG+AGG | - | Chr7:68119836-68119855 | MsG0780039722.01.T01:CDS | 40.0% |
| !!! | GCACAGTTTTTGAGTGAAGA+GGG | - | Chr7:68119837-68119856 | MsG0780039722.01.T01:CDS | 40.0% |
| AATCCTCCTGCGAATCACTA+TGG | + | Chr7:68120567-68120586 | None:intergenic | 45.0% | |
| ATGATTCCTTGTCGAGGACT+TGG | - | Chr7:68119946-68119965 | MsG0780039722.01.T01:CDS | 45.0% | |
| CAGGAGGATTGTTGAGTCAA+GGG | - | Chr7:68120577-68120596 | MsG0780039722.01.T01:CDS | 45.0% | |
| CTCAAAAACTGTGCTGTCTC+CGG | + | Chr7:68119831-68119850 | None:intergenic | 45.0% | |
| GTTGCCTGTGAATTTATCGG+AGG | - | Chr7:68120619-68120638 | MsG0780039722.01.T01:CDS | 45.0% | |
| TACCCGTATTTCCACTTGAC+CGG | + | Chr7:68120499-68120518 | None:intergenic | 45.0% | |
| TATCCATAGTGATTCGCAGG+AGG | - | Chr7:68120561-68120580 | MsG0780039722.01.T01:CDS | 45.0% | |
| TCACCGGTCAAGTGGAAATA+CGG | - | Chr7:68120493-68120512 | MsG0780039722.01.T01:CDS | 45.0% | |
| TGATGGGGATAGTAGTGTTG+GGG | - | Chr7:68120328-68120347 | MsG0780039722.01.T01:CDS | 45.0% | |
| TGATTCCTTGTCGAGGACTT+GGG | - | Chr7:68119947-68119966 | MsG0780039722.01.T01:CDS | 45.0% | |
| TGCACCTAAAGACCTTGTTC+CGG | - | Chr7:68119809-68119828 | MsG0780039722.01.T01:CDS | 45.0% | |
| ! | GTTGATGGGGATAGTAGTGT+TGG | - | Chr7:68120326-68120345 | MsG0780039722.01.T01:CDS | 45.0% |
| ACTTGGGTGTTTCCGGTTGT+GGG | - | Chr7:68120140-68120159 | MsG0780039722.01.T01:CDS | 50.0% | |
| AGTAACCCAAGTCCTCGACA+AGG | + | Chr7:68119955-68119974 | None:intergenic | 50.0% | |
| CACCGGTCAAGTGGAAATAC+GGG | - | Chr7:68120494-68120513 | MsG0780039722.01.T01:CDS | 50.0% | |
| CTCAATAGTCACCGGTCAAG+TGG | - | Chr7:68120485-68120504 | MsG0780039722.01.T01:CDS | 50.0% | |
| GCAGGAGGATTGTTGAGTCA+AGG | - | Chr7:68120576-68120595 | MsG0780039722.01.T01:CDS | 50.0% | |
| GTCTCCGGAACAAGGTCTTT+AGG | + | Chr7:68119816-68119835 | None:intergenic | 50.0% | |
| TACCATCAACGACGTGTGCA+AGG | + | Chr7:68120388-68120407 | None:intergenic | 50.0% | |
| ACTGTGCTGTCTCCGGAACA+AGG | + | Chr7:68119824-68119843 | None:intergenic | 55.0% | |
| AGCCTTGCACACGTCGTTGA+TGG | - | Chr7:68120383-68120402 | MsG0780039722.01.T01:CDS | 55.0% | |
| GACTTGGGTGTTTCCGGTTG+TGG | - | Chr7:68120139-68120158 | MsG0780039722.01.T01:CDS | 55.0% | |
| TGTGCAAGGCTGCTCTTCGA+AGG | + | Chr7:68120374-68120393 | None:intergenic | 55.0% | |
| TGGGTGTTTCCGGTTGTGGG+TGG | - | Chr7:68120143-68120162 | MsG0780039722.01.T01:CDS | 60.0% | |
| GGCGAGTCGTGAGGTTGGAC+CGG | - | Chr7:68120052-68120071 | MsG0780039722.01.T01:CDS | 65.0% | |
| !! | AGTTGGTGGGGCGAGTCGTG+AGG | - | Chr7:68120043-68120062 | MsG0780039722.01.T01:CDS | 65.0% |
| GGTGGGGCGAGTCGTGAGGT+TGG | - | Chr7:68120047-68120066 | MsG0780039722.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 68119612 | 68120658 | 68119612 | ID=MsG0780039722.01;Name=MsG0780039722.01 |
| Chr7 | mRNA | 68119612 | 68120658 | 68119612 | ID=MsG0780039722.01.T01;Parent=MsG0780039722.01;Name=MsG0780039722.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|348 |
| Chr7 | exon | 68119612 | 68120658 | 68119612 | ID=MsG0780039722.01.T01:exon:11777;Parent=MsG0780039722.01.T01 |
| Chr7 | CDS | 68119612 | 68120658 | 68119612 | ID=MsG0780039722.01.T01:cds;Parent=MsG0780039722.01.T01 |
| Gene Sequence |
| Protein sequence |
