Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024323.01.T01 | XP_003610965.1 | 98.79 | 496 | 6 | 0 | 1 | 496 | 1 | 496 | 0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024323.01.T01 | Q9LPS1 | 72.034 | 472 | 129 | 3 | 25 | 494 | 25 | 495 | 0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024323.01.T01 | G7K998 | 98.790 | 496 | 6 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048058.01 | MsG0580024323.01 | 0.855573 | 5.762026e-62 | 1.336193e-58 |
| MsG0080048178.01 | MsG0580024323.01 | 0.808222 | 3.443686e-50 | 1.957907e-47 |
| MsG0180000001.01 | MsG0580024323.01 | 0.814552 | 1.454064e-51 | 9.786941e-49 |
| MsG0180000101.01 | MsG0580024323.01 | 0.805526 | 1.279350e-49 | 6.783552e-47 |
| MsG0180000197.01 | MsG0580024323.01 | 0.842216 | 2.960303e-58 | 4.457028e-55 |
| MsG0180000494.01 | MsG0580024323.01 | 0.811102 | 8.282130e-51 | 5.081428e-48 |
| MsG0180000553.01 | MsG0580024323.01 | 0.800222 | 1.594467e-48 | 7.383680e-46 |
| MsG0180000555.01 | MsG0580024323.01 | 0.802702 | 4.948469e-49 | 2.440416e-46 |
| MsG0180001294.01 | MsG0580024323.01 | 0.827369 | 1.625410e-54 | 1.566261e-51 |
| MsG0180001315.01 | MsG0580024323.01 | 0.804127 | 2.507539e-49 | 1.282610e-46 |
| MsG0180001599.01 | MsG0580024323.01 | 0.801209 | 1.003243e-48 | 4.763462e-46 |
| MsG0180001922.01 | MsG0580024323.01 | 0.810738 | 9.930048e-51 | 6.033882e-48 |
| MsG0180002074.01 | MsG0580024323.01 | 0.836524 | 8.898951e-57 | 1.124263e-53 |
| MsG0180002300.01 | MsG0580024323.01 | 0.803602 | 3.222719e-49 | 1.626397e-46 |
| MsG0180003190.01 | MsG0580024323.01 | 0.818758 | 1.658475e-52 | 1.252477e-49 |
| MsG0180003303.01 | MsG0580024323.01 | 0.812998 | 3.196523e-51 | 2.062691e-48 |
| MsG0180003744.01 | MsG0580024323.01 | 0.839044 | 2.005014e-57 | 2.735434e-54 |
| MsG0180004444.01 | MsG0580024323.01 | 0.813254 | 2.809215e-51 | 1.825249e-48 |
| MsG0180004499.01 | MsG0580024323.01 | 0.810609 | 1.058585e-50 | 6.410130e-48 |
| MsG0180004598.01 | MsG0580024323.01 | 0.843543 | 1.313796e-58 | 2.062360e-55 |
| MsG0180004645.01 | MsG0580024323.01 | 0.857542 | 1.520998e-62 | 3.767209e-59 |
| MsG0180004689.01 | MsG0580024323.01 | 0.824746 | 6.829787e-54 | 6.104147e-51 |
| MsG0180004730.01 | MsG0580024323.01 | 0.803303 | 3.717755e-49 | 1.861717e-46 |
| MsG0180004991.01 | MsG0580024323.01 | 0.822665 | 2.098113e-53 | 1.767511e-50 |
| MsG0180005125.01 | MsG0580024323.01 | 0.823446 | 1.379482e-53 | 1.187990e-50 |
| MsG0180005443.01 | MsG0580024323.01 | 0.831769 | 1.383620e-55 | 1.516513e-52 |
| MsG0180005451.01 | MsG0580024323.01 | 0.840366 | 9.081220e-58 | 1.290703e-54 |
| MsG0180005493.01 | MsG0580024323.01 | 0.874661 | 5.671069e-68 | 2.573836e-64 |
| MsG0180005765.01 | MsG0580024323.01 | 0.808069 | 3.712196e-50 | 2.101970e-47 |
| MsG0180005944.01 | MsG0580024323.01 | 0.822551 | 2.229412e-53 | 1.872184e-50 |
| MsG0180005949.01 | MsG0580024323.01 | 0.840946 | 6.398742e-58 | 9.259267e-55 |
| MsG0180005985.01 | MsG0580024323.01 | 0.810677 | 1.023541e-50 | 6.209353e-48 |
| MsG0180006061.01 | MsG0580024323.01 | 0.858477 | 8.018581e-63 | 2.049289e-59 |
| MsG0180006235.01 | MsG0580024323.01 | 0.809016 | 2.330391e-50 | 1.352852e-47 |
| MsG0280006367.01 | MsG0580024323.01 | 0.812412 | 4.294907e-51 | 2.729029e-48 |
| MsG0280006368.01 | MsG0580024323.01 | 0.825584 | 4.327943e-54 | 3.961288e-51 |
| MsG0280010632.01 | MsG0580024323.01 | 0.825436 | 4.691628e-54 | 4.275867e-51 |
| MsG0280010735.01 | MsG0580024323.01 | 0.805930 | 1.052173e-49 | 5.637471e-47 |
| MsG0280010816.01 | MsG0580024323.01 | 0.850160 | 2.032134e-60 | 3.944529e-57 |
| MsG0280010901.01 | MsG0580024323.01 | 0.833970 | 3.927824e-56 | 4.596607e-53 |
| MsG0280010976.01 | MsG0580024323.01 | 0.812836 | 3.469591e-51 | 2.229078e-48 |
| MsG0280011105.01 | MsG0580024323.01 | 0.817608 | 3.019239e-52 | 2.209010e-49 |
| MsG0280011410.01 | MsG0580024323.01 | 0.851271 | 9.895575e-61 | 1.992112e-57 |
| MsG0280011423.01 | MsG0580024323.01 | 0.834291 | 3.263459e-56 | 3.855962e-53 |
| MsG0380011729.01 | MsG0580024323.01 | 0.833060 | 6.623276e-56 | 7.542363e-53 |
| MsG0380012020.01 | MsG0580024323.01 | 0.817265 | 3.607811e-52 | 2.614821e-49 |
| MsG0380012458.01 | MsG0580024323.01 | 0.866896 | 2.039359e-65 | 6.985537e-62 |
| MsG0380014913.01 | MsG0580024323.01 | 0.839014 | 2.041485e-57 | 2.782639e-54 |
| MsG0480018479.01 | MsG0580024323.01 | 0.806652 | 7.412789e-50 | 4.045269e-47 |
| MsG0480018846.01 | MsG0580024323.01 | 0.886214 | 4.153925e-72 | 2.940392e-68 |
| MsG0480019170.01 | MsG0580024323.01 | 0.826854 | 2.158939e-54 | 2.048864e-51 |
| MsG0480019289.01 | MsG0580024323.01 | 0.813934 | 1.990361e-51 | 1.317351e-48 |
| MsG0480020135.01 | MsG0580024323.01 | 0.812576 | 3.954183e-51 | 2.523329e-48 |
| MsG0480020242.01 | MsG0580024323.01 | 0.836154 | 1.105272e-56 | 1.381090e-53 |
| MsG0480020416.01 | MsG0580024323.01 | 0.834965 | 2.209424e-56 | 2.663840e-53 |
| MsG0480020530.01 | MsG0580024323.01 | 0.887250 | 1.683381e-72 | 1.242505e-68 |
| MsG0480020540.01 | MsG0580024323.01 | 0.812811 | 3.513943e-51 | 2.256056e-48 |
| MsG0480020791.01 | MsG0580024323.01 | 0.808481 | 3.032800e-50 | 1.736066e-47 |
| MsG0480020917.01 | MsG0580024323.01 | 0.830443 | 2.928313e-55 | 3.085493e-52 |
| MsG0480021216.01 | MsG0580024323.01 | 0.811656 | 6.278081e-51 | 3.908286e-48 |
| MsG0480021240.01 | MsG0580024323.01 | 0.802146 | 6.444167e-49 | 3.133225e-46 |
| MsG0480021432.01 | MsG0580024323.01 | 0.815047 | 1.128925e-51 | 7.700416e-49 |
| MsG0480021900.01 | MsG0580024323.01 | 0.858144 | 1.008067e-62 | 2.547437e-59 |
| MsG0480022228.01 | MsG0580024323.01 | 0.855411 | 6.425881e-62 | 1.482296e-58 |
| MsG0480022552.01 | MsG0580024323.01 | 0.805323 | 1.411072e-49 | 7.443221e-47 |
| MsG0480022597.01 | MsG0580024323.01 | 0.838616 | 2.587467e-57 | 3.484582e-54 |
| MsG0480022598.01 | MsG0580024323.01 | 0.843136 | 1.686880e-58 | 2.613897e-55 |
| MsG0480022678.01 | MsG0580024323.01 | 0.800113 | 1.678427e-48 | 7.750838e-46 |
| MsG0480022717.01 | MsG0580024323.01 | 0.810427 | 1.159237e-50 | 6.985335e-48 |
| MsG0480022719.01 | MsG0580024323.01 | 0.819837 | 9.415555e-53 | 7.326998e-50 |
| MsG0480023240.01 | MsG0580024323.01 | 0.866778 | 2.222291e-65 | 7.580975e-62 |
| MsG0480023447.01 | MsG0580024323.01 | 0.815218 | 1.034921e-51 | 7.091651e-49 |
| MsG0480023718.01 | MsG0580024323.01 | 0.814011 | 1.914298e-51 | 1.269696e-48 |
| MsG0580024205.01 | MsG0580024323.01 | 0.826905 | 2.098461e-54 | 1.994686e-51 |
| MsG0580024323.01 | MsG0580024721.01 | 0.815245 | 1.020353e-51 | 6.997185e-49 |
| MsG0580024323.01 | MsG0580024819.01 | 0.803011 | 4.273041e-49 | 2.123758e-46 |
| MsG0580024323.01 | MsG0580024960.01 | 0.823427 | 1.393582e-53 | 1.199455e-50 |
| MsG0580024323.01 | MsG0580024963.01 | 0.801792 | 7.616964e-49 | 3.670295e-46 |
| MsG0580024323.01 | MsG0580025236.01 | 0.817326 | 3.494994e-52 | 2.537375e-49 |
| MsG0580024323.01 | MsG0580025989.01 | 0.809981 | 1.446429e-50 | 8.615307e-48 |
| MsG0580024323.01 | MsG0580027319.01 | -0.834250 | 3.340306e-56 | 3.941856e-53 |
| MsG0580024323.01 | MsG0580027476.01 | 0.827985 | 1.156205e-54 | 1.134210e-51 |
| MsG0580024323.01 | MsG0580028526.01 | 0.827623 | 1.412300e-54 | 1.370617e-51 |
| MsG0580024323.01 | MsG0580028888.01 | 0.817070 | 3.989190e-52 | 2.876099e-49 |
| MsG0580024323.01 | MsG0580029231.01 | 0.825113 | 5.594919e-54 | 5.052865e-51 |
| MsG0580024323.01 | MsG0580029639.01 | 0.800091 | 1.695336e-48 | 7.824776e-46 |
| MsG0580024323.01 | MsG0580029658.01 | 0.834466 | 2.949439e-56 | 3.503274e-53 |
| MsG0580024323.01 | MsG0580030235.01 | 0.807724 | 4.395680e-50 | 2.466623e-47 |
| MsG0580024323.01 | MsG0680030621.01 | 0.818181 | 2.240866e-52 | 1.665545e-49 |
| MsG0580024323.01 | MsG0680030684.01 | 0.851513 | 8.454218e-61 | 1.715250e-57 |
| MsG0580024323.01 | MsG0680030841.01 | 0.820209 | 7.742396e-53 | 6.087399e-50 |
| MsG0580024323.01 | MsG0680031063.01 | 0.811456 | 6.939854e-51 | 4.297873e-48 |
| MsG0580024323.01 | MsG0680031508.01 | 0.803075 | 4.144344e-49 | 2.063166e-46 |
| MsG0580024323.01 | MsG0680034757.01 | 0.838454 | 2.847658e-57 | 3.816252e-54 |
| MsG0580024323.01 | MsG0780036548.01 | 0.813274 | 2.780738e-51 | 1.807820e-48 |
| MsG0580024323.01 | MsG0780036630.01 | 0.840830 | 6.864353e-58 | 9.897970e-55 |
| MsG0580024323.01 | MsG0780036633.01 | 0.830458 | 2.903173e-55 | 3.060218e-52 |
| MsG0580024323.01 | MsG0780036635.01 | 0.842564 | 2.394684e-58 | 3.645315e-55 |
| MsG0580024323.01 | MsG0780036773.01 | 0.836127 | 1.122592e-56 | 1.401575e-53 |
| MsG0580024323.01 | MsG0780036845.01 | 0.818915 | 1.527471e-52 | 1.158640e-49 |
| MsG0580024323.01 | MsG0780037755.01 | 0.820126 | 8.087297e-53 | 6.344691e-50 |
| MsG0580024323.01 | MsG0780037975.01 | 0.823694 | 1.206877e-53 | 1.046875e-50 |
| MsG0580024323.01 | MsG0780039587.01 | 0.801739 | 7.811816e-49 | 3.758922e-46 |
| MsG0580024323.01 | MsG0780039722.01 | 0.803512 | 3.364811e-49 | 1.694178e-46 |
| MsG0580024323.01 | MsG0780040182.01 | 0.808497 | 3.009050e-50 | 1.723163e-47 |
| MsG0580024323.01 | MsG0780040190.01 | 0.811011 | 8.665471e-51 | 5.304468e-48 |
| MsG0580024323.01 | MsG0780040290.01 | 0.807384 | 5.190444e-50 | 2.886938e-47 |
| MsG0580024323.01 | MsG0780040312.01 | 0.833616 | 4.815395e-56 | 5.574778e-53 |
| MsG0580024323.01 | MsG0780040389.01 | 0.807935 | 3.963166e-50 | 2.236157e-47 |
| MsG0580024323.01 | MsG0780040505.01 | 0.808690 | 2.736514e-50 | 1.574916e-47 |
| MsG0580024323.01 | MsG0780040516.01 | 0.841179 | 5.559999e-58 | 8.103507e-55 |
| MsG0580024323.01 | MsG0780040519.01 | 0.853788 | 1.895040e-61 | 4.142551e-58 |
| MsG0580024323.01 | MsG0780040742.01 | 0.807194 | 5.695191e-50 | 3.152021e-47 |
| MsG0580024323.01 | MsG0780040845.01 | 0.803528 | 3.338612e-49 | 1.681717e-46 |
| MsG0580024323.01 | MsG0780040854.01 | 0.852038 | 6.000230e-61 | 1.237868e-57 |
| MsG0580024323.01 | MsG0780040897.01 | 0.800100 | 1.688354e-48 | 7.794219e-46 |
| MsG0580024323.01 | MsG0780041310.01 | 0.855631 | 5.542096e-62 | 1.287687e-58 |
| MsG0580024323.01 | MsG0780041370.01 | 0.850720 | 1.414480e-60 | 2.796332e-57 |
| MsG0580024323.01 | MsG0780041423.01 | 0.827035 | 1.953816e-54 | 1.864067e-51 |
| MsG0580024323.01 | MsG0780041469.01 | 0.831355 | 1.749696e-55 | 1.894056e-52 |
| MsG0580024323.01 | MsG0880042206.01 | 0.851551 | 8.246296e-61 | 1.675196e-57 |
| MsG0580024323.01 | MsG0880042329.01 | 0.845531 | 3.831317e-59 | 6.404016e-56 |
| MsG0580024323.01 | MsG0880042811.01 | 0.843597 | 1.270728e-58 | 1.998261e-55 |
| MsG0580024323.01 | MsG0880042829.01 | 0.812279 | 4.591933e-51 | 2.907319e-48 |
| MsG0580024323.01 | MsG0880042837.01 | 0.825866 | 3.710319e-54 | 3.423607e-51 |
| MsG0580024323.01 | MsG0880043001.01 | 0.805784 | 1.129254e-49 | 6.027933e-47 |
| MsG0580024323.01 | MsG0880043116.01 | 0.813155 | 2.954095e-51 | 1.914172e-48 |
| MsG0580024323.01 | MsG0880043194.01 | 0.802429 | 5.634127e-49 | 2.759344e-46 |
| MsG0580024323.01 | MsG0880043341.01 | 0.820430 | 6.888616e-53 | 5.449550e-50 |
| MsG0580024323.01 | MsG0880043489.01 | 0.838151 | 3.409676e-57 | 4.526452e-54 |
| MsG0580024323.01 | MsG0880043522.01 | 0.805029 | 1.626262e-49 | 8.513463e-47 |
| MsG0580024323.01 | MsG0880044075.01 | 0.817939 | 2.541813e-52 | 1.876654e-49 |
| MsG0580024323.01 | MsG0880044546.01 | 0.826024 | 3.403897e-54 | 3.154858e-51 |
| MsG0580024323.01 | MsG0880045165.01 | 0.845908 | 3.027996e-59 | 5.123820e-56 |
| MsG0580024323.01 | MsG0880045329.01 | 0.812445 | 4.223652e-51 | 2.686165e-48 |
| MsG0580024323.01 | MsG0880045914.01 | 0.873382 | 1.535836e-67 | 6.651529e-64 |
| MsG0580024323.01 | MsG0880046068.01 | 0.802879 | 4.550566e-49 | 2.254237e-46 |
| MsG0580024323.01 | MsG0880046085.01 | 0.806921 | 6.502546e-50 | 3.573489e-47 |
| MsG0580024323.01 | MsG0880046113.01 | 0.835676 | 1.460660e-56 | 1.798979e-53 |
| MsG0580024323.01 | MsG0880046163.01 | 0.894434 | 2.476276e-75 | 2.461350e-71 |
| MsG0580024323.01 | MsG0880046404.01 | 0.823114 | 1.648453e-53 | 1.406538e-50 |
| MsG0580024323.01 | MsG0880046560.01 | 0.861566 | 9.379650e-64 | 2.665545e-60 |
| MsG0580024323.01 | MsG0880046561.01 | 0.849831 | 2.511567e-60 | 4.822575e-57 |
| MsG0580024323.01 | MsG0880046684.01 | 0.852568 | 4.238846e-61 | 8.893758e-58 |
| MsG0580024323.01 | MsG0880047016.01 | 0.810047 | 1.399595e-50 | 8.350818e-48 |
| MsG0580024323.01 | MsG0880047289.01 | 0.801914 | 7.191273e-49 | 3.475917e-46 |
| MsG0580024323.01 | MsG0880047353.01 | 0.807540 | 4.809210e-50 | 2.685708e-47 |
| MsG0580024323.01 | MsG0880047590.01 | 0.816167 | 6.357742e-52 | 4.471772e-49 |
| MsG0380015138.01 | MsG0580024323.01 | 0.828344 | 9.469624e-55 | 9.386389e-52 |
| MsG0380015289.01 | MsG0580024323.01 | 0.816128 | 6.486163e-52 | 4.557212e-49 |
| MsG0380015607.01 | MsG0580024323.01 | 0.835633 | 1.497577e-56 | 1.841954e-53 |
| MsG0380015702.01 | MsG0580024323.01 | 0.888110 | 7.894210e-73 | 6.032374e-69 |
| MsG0380015812.01 | MsG0580024323.01 | 0.804492 | 2.104909e-49 | 1.086771e-46 |
| MsG0380016227.01 | MsG0580024323.01 | 0.856748 | 2.608097e-62 | 6.287588e-59 |
| MsG0380016510.01 | MsG0580024323.01 | 0.818321 | 2.083682e-52 | 1.554662e-49 |
| MsG0380016985.01 | MsG0580024323.01 | 0.849151 | 3.887006e-60 | 7.302147e-57 |
| MsG0380017055.01 | MsG0580024323.01 | 0.834646 | 2.657557e-56 | 3.173336e-53 |
| MsG0380017210.01 | MsG0580024323.01 | 0.807362 | 5.244985e-50 | 2.915571e-47 |
| MsG0380017410.01 | MsG0580024323.01 | 0.805706 | 1.172713e-49 | 6.247619e-47 |
| MsG0380017476.01 | MsG0580024323.01 | 0.805137 | 1.543581e-49 | 8.103522e-47 |
| MsG0380017604.01 | MsG0580024323.01 | 0.841609 | 4.282342e-58 | 6.326530e-55 |
| MsG0380017719.01 | MsG0580024323.01 | 0.846639 | 1.913789e-59 | 3.315621e-56 |
| MsG0380017798.01 | MsG0580024323.01 | -0.807554 | 4.776758e-50 | 2.668517e-47 |
| MsG0280006519.01 | MsG0580024323.01 | 0.804268 | 2.343406e-49 | 1.202972e-46 |
| MsG0280006692.01 | MsG0580024323.01 | 0.847474 | 1.130375e-59 | 2.011533e-56 |
| MsG0280006728.01 | MsG0580024323.01 | 0.812540 | 4.028166e-51 | 2.568165e-48 |
| MsG0280006906.01 | MsG0580024323.01 | 0.846248 | 2.447026e-59 | 4.185720e-56 |
| MsG0280006935.01 | MsG0580024323.01 | 0.852126 | 5.662721e-61 | 1.171623e-57 |
| MsG0280007035.01 | MsG0580024323.01 | 0.812954 | 3.268439e-51 | 2.106470e-48 |
| MsG0280007048.01 | MsG0580024323.01 | 0.877563 | 5.683664e-69 | 2.870406e-65 |
| MsG0280007219.01 | MsG0580024323.01 | 0.808938 | 2.421310e-50 | 1.402697e-47 |
| MsG0280007484.01 | MsG0580024323.01 | 0.829199 | 5.884147e-55 | 5.980846e-52 |
| MsG0280007487.01 | MsG0580024323.01 | 0.816017 | 6.867215e-52 | 4.810459e-49 |
| MsG0280007790.01 | MsG0580024323.01 | 0.811949 | 5.419425e-51 | 3.400442e-48 |
| MsG0280008039.01 | MsG0580024323.01 | 0.834142 | 3.555809e-56 | 4.181918e-53 |
| MsG0280009774.01 | MsG0580024323.01 | 0.829085 | 6.268256e-55 | 6.349139e-52 |
| MsG0280010239.01 | MsG0580024323.01 | 0.807381 | 5.196831e-50 | 2.890318e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680035781.01 | MsG0580024323.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024323.01.T01 | MTR_5g009000 | 98.790 | 496 | 6 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1009 |
| MsG0580024323.01.T01 | MTR_8g102460 | 57.173 | 474 | 191 | 5 | 26 | 496 | 26 | 490 | 0.0 | 542 |
| MsG0580024323.01.T01 | MTR_8g014530 | 55.912 | 499 | 207 | 5 | 1 | 496 | 1 | 489 | 0.0 | 523 |
| MsG0580024323.01.T01 | MTR_6g088795 | 52.778 | 468 | 209 | 3 | 32 | 496 | 30 | 488 | 2.85e-175 | 502 |
| MsG0580024323.01.T01 | MTR_1g025140 | 49.582 | 478 | 223 | 6 | 26 | 496 | 24 | 490 | 3.60e-151 | 441 |
| MsG0580024323.01.T01 | MTR_8g102460 | 59.517 | 331 | 131 | 3 | 26 | 353 | 26 | 356 | 1.71e-138 | 404 |
| MsG0580024323.01.T01 | MTR_8g102460 | 55.769 | 364 | 149 | 5 | 136 | 496 | 1 | 355 | 9.50e-137 | 399 |
| MsG0580024323.01.T01 | MTR_1g025140 | 51.253 | 359 | 167 | 4 | 26 | 377 | 24 | 381 | 4.37e-117 | 350 |
| MsG0580024323.01.T01 | MTR_4g097900 | 40.441 | 272 | 114 | 3 | 222 | 492 | 3 | 227 | 7.45e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024323.01.T01 | AT1G50460 | 72.034 | 472 | 129 | 3 | 25 | 494 | 25 | 495 | 0.0 | 702 |
| MsG0580024323.01.T01 | AT3G20040 | 67.137 | 496 | 157 | 3 | 1 | 494 | 1 | 492 | 0.0 | 632 |
| MsG0580024323.01.T01 | AT1G50460 | 71.040 | 404 | 114 | 3 | 93 | 494 | 17 | 419 | 0.0 | 590 |
| MsG0580024323.01.T01 | AT4G29130 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 543 |
| MsG0580024323.01.T01 | AT2G19860 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 540 |
| MsG0580024323.01.T01 | AT1G50460 | 73.636 | 330 | 86 | 1 | 25 | 353 | 25 | 354 | 1.33e-179 | 508 |
| MsG0580024323.01.T01 | AT1G47840 | 49.677 | 465 | 210 | 7 | 40 | 496 | 43 | 491 | 2.25e-145 | 426 |
| MsG0580024323.01.T01 | AT2G19860 | 53.470 | 389 | 169 | 3 | 111 | 496 | 2 | 381 | 2.33e-139 | 407 |
| MsG0580024323.01.T01 | AT1G47840 | 52.201 | 318 | 146 | 4 | 40 | 353 | 43 | 358 | 3.00e-104 | 317 |
| MsG0580024323.01.T01 | AT4G37840 | 39.331 | 478 | 267 | 7 | 22 | 493 | 22 | 482 | 1.00e-99 | 309 |
| MsG0580024323.01.T01 | AT1G47845 | 46.528 | 144 | 73 | 3 | 277 | 418 | 40 | 181 | 1.81e-34 | 128 |
Find 139 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTTTAAACGAAATAT+TGG | 0.248960 | 5:+3399021 | MsG0580024323.01.T01:CDS |
| CTAACCTGATCATTTGGATT+AGG | 0.252444 | 5:-3397553 | None:intergenic |
| CATATTATGCGCTGCATCTT+GGG | 0.273264 | 5:+3396089 | MsG0580024323.01.T01:CDS |
| GAAGCTTTAAACGAAATATT+GGG | 0.286275 | 5:+3399022 | MsG0580024323.01.T01:CDS |
| TAACCTGATCATTTGGATTA+GGG | 0.298457 | 5:-3397552 | None:intergenic |
| TCAATGTCATACTGTGTTCT+TGG | 0.301091 | 5:-3397514 | None:intergenic |
| TCATTTCAGGACTCCTTTGA+TGG | 0.304467 | 5:+3398599 | MsG0580024323.01.T01:intron |
| AAGAACGAATTCTGATTTAC+AGG | 0.312930 | 5:-3399212 | None:intergenic |
| CTTGCCTTCAATGGAAGATC+TGG | 0.322162 | 5:-3398785 | None:intergenic |
| GAAACAGACATTTGTTTCAT+AGG | 0.324581 | 5:-3396434 | None:intergenic |
| CCATATTATGCGCTGCATCT+TGG | 0.333001 | 5:+3396088 | MsG0580024323.01.T01:CDS |
| CCAAGATGCAGCGCATAATA+TGG | 0.343745 | 5:-3396088 | None:intergenic |
| ATAAGTTGTAAGAGATCCTT+TGG | 0.344990 | 5:+3399349 | MsG0580024323.01.T01:three_prime_UTR |
| CAGGAAGCATTTGCACGAAA+TGG | 0.346216 | 5:+3396693 | MsG0580024323.01.T01:CDS |
| CAAAACCTAACCTGATCATT+TGG | 0.352757 | 5:-3397559 | None:intergenic |
| GGTGGCGGCGTGTGCGGTGG+CGG | 0.355755 | 5:+3394589 | MsG0580024323.01.T01:CDS |
| AGATGTTGCAGCATGTTTGC+AGG | 0.362698 | 5:+3396674 | MsG0580024323.01.T01:CDS |
| GTTGTAAATGCAATAGTATT+AGG | 0.370977 | 5:+3399372 | MsG0580024323.01.T01:three_prime_UTR |
| CCTTCTGTCCTGTGAAGTAT+TGG | 0.373474 | 5:-3396387 | None:intergenic |
| GATTCCAGATCTTCCATTGA+AGG | 0.383594 | 5:+3398781 | MsG0580024323.01.T01:intron |
| GTTGGCATCTTGAAGAAGAT+TGG | 0.393117 | 5:+3398875 | MsG0580024323.01.T01:CDS |
| GTTGAAAGCTTCGAAGAAAT+AGG | 0.397856 | 5:-3397739 | None:intergenic |
| CCGAAGATGGATCAGGCATT+GGG | 0.399324 | 5:+3399080 | MsG0580024323.01.T01:CDS |
| ACTATTGCAGCAACAGTGTC+TGG | 0.403276 | 5:-3397279 | None:intergenic |
| TTAGCAGCTGCTGGTATTGT+TGG | 0.409433 | 5:+3398857 | MsG0580024323.01.T01:CDS |
| ATTCTTAATGTCACCGAAGA+TGG | 0.411432 | 5:+3399067 | MsG0580024323.01.T01:CDS |
| GTTTCATCTATTCTTTGATC+AGG | 0.412887 | 5:+3399259 | MsG0580024323.01.T01:three_prime_UTR |
| TGATGCTATTATCAAGTGTC+AGG | 0.416448 | 5:+3397341 | MsG0580024323.01.T01:CDS |
| TTAGGTTGTCAATATGGAAT+GGG | 0.425444 | 5:+3397468 | MsG0580024323.01.T01:intron |
| GACGGCGACGGTGGCGGTGG+CGG | 0.428913 | 5:+3394574 | MsG0580024323.01.T01:CDS |
| TCACTAGAGTCGGATATGTT+TGG | 0.429372 | 5:+3397715 | MsG0580024323.01.T01:CDS |
| AACCCTCAACGACACCTTTG+AGG | 0.435865 | 5:+3398668 | MsG0580024323.01.T01:CDS |
| GGGAGTGACGGCGACGGTGG+CGG | 0.445488 | 5:+3394568 | MsG0580024323.01.T01:CDS |
| CTTGCTACTTCTATCAAGTC+AGG | 0.448747 | 5:-3398645 | None:intergenic |
| GGCGGCGTGTGCGGTGGCGG+CGG | 0.449757 | 5:+3394592 | MsG0580024323.01.T01:CDS |
| GACGGGAGTGGTGGCATCAC+AGG | 0.450160 | 5:+3398902 | MsG0580024323.01.T01:CDS |
| TACCTCAAAGGTGTCGTTGA+GGG | 0.450281 | 5:-3398670 | None:intergenic |
| GAAACAAATGTCTGTTTCCT+CGG | 0.450286 | 5:+3396439 | MsG0580024323.01.T01:CDS |
| GAGTGAAGAGTAGAAGAAAG+TGG | 0.451502 | 5:+3394630 | MsG0580024323.01.T01:CDS |
| GAAGATGGGAAGAGTGGTAG+TGG | 0.452894 | 5:+3394547 | None:intergenic |
| TATTTAATATCTCTGTATAG+AGG | 0.455370 | 5:+3399237 | MsG0580024323.01.T01:three_prime_UTR |
| ACCACCTTCAGAAGCTAAAC+CGG | 0.457674 | 5:-3394753 | None:intergenic |
| AGCCGCTCTGCACGTAAAGC+AGG | 0.458779 | 5:-3399494 | None:intergenic |
| TTTAGGTTGTCAATATGGAA+TGG | 0.460418 | 5:+3397467 | MsG0580024323.01.T01:intron |
| TCACAGGACAGAAGGGAACT+TGG | 0.465295 | 5:+3396395 | MsG0580024323.01.T01:CDS |
| GGTGGCGGTGGCGGCGTGTG+CGG | 0.466342 | 5:+3394583 | MsG0580024323.01.T01:CDS |
| AGTGACGGCGACGGTGGCGG+TGG | 0.467501 | 5:+3394571 | MsG0580024323.01.T01:CDS |
| CCCAATGCCTGATCCATCTT+CGG | 0.469673 | 5:-3399080 | None:intergenic |
| GAATTCATTGCTAAAGAAGA+TGG | 0.471311 | 5:+3396362 | MsG0580024323.01.T01:CDS |
| AAACAGACATTTGTTTCATA+GGG | 0.475582 | 5:-3396433 | None:intergenic |
| GGCGGTGGCGGCGTGTGCGG+TGG | 0.477522 | 5:+3394586 | MsG0580024323.01.T01:CDS |
| ACCGAAGATGGATCAGGCAT+TGG | 0.478914 | 5:+3399079 | MsG0580024323.01.T01:CDS |
| ATACGAGTGTTGGAAGGTTA+AGG | 0.481037 | 5:+3394696 | MsG0580024323.01.T01:CDS |
| CTGTTGGAACATTAGCTGTT+GGG | 0.486153 | 5:+3397244 | MsG0580024323.01.T01:CDS |
| ATCAATTCGCTCCAAGTAGC+AGG | 0.487352 | 5:-3397322 | None:intergenic |
| TGGTACTAATGCCTGCTACT+TGG | 0.489030 | 5:+3397311 | MsG0580024323.01.T01:CDS |
| AAGCAGGTTAATGATACTGT+TGG | 0.489212 | 5:+3397228 | MsG0580024323.01.T01:intron |
| AGGCAGCTACATGCACATCT+AGG | 0.489720 | 5:-3396716 | None:intergenic |
| AAGCCCTAATCCAAATGATC+AGG | 0.491358 | 5:+3397549 | MsG0580024323.01.T01:CDS |
| CAGGGTCTTCTTACAACATC+AGG | 0.499400 | 5:+3397360 | MsG0580024323.01.T01:CDS |
| TGAAGAAGATTGGTCGTGAC+GGG | 0.506742 | 5:+3398885 | MsG0580024323.01.T01:CDS |
| AGAACAGTTGTGGCAATTGA+AGG | 0.507809 | 5:+3398956 | MsG0580024323.01.T01:CDS |
| AATGTCACCGAAGATGGATC+AGG | 0.512205 | 5:+3399073 | MsG0580024323.01.T01:CDS |
| ACTGTTGCTGCAATAGTCAT+TGG | 0.514702 | 5:+3397285 | MsG0580024323.01.T01:CDS |
| GTAACGCGGGTTCATTTAAG+TGG | 0.515646 | 5:+3396127 | MsG0580024323.01.T01:CDS |
| TCGTGAGGAGAGTCATTCTC+AGG | 0.519035 | 5:+3397689 | MsG0580024323.01.T01:CDS |
| ATATTATGCGCTGCATCTTG+GGG | 0.519770 | 5:+3396090 | MsG0580024323.01.T01:CDS |
| AAACAAATGTCTGTTTCCTC+GGG | 0.521874 | 5:+3396440 | MsG0580024323.01.T01:CDS |
| AAGGCAAGTGGTTGATGCTA+TGG | 0.522670 | 5:+3394715 | MsG0580024323.01.T01:CDS |
| AGATGTGCATGTAGCTGCCT+TGG | 0.522932 | 5:+3396719 | MsG0580024323.01.T01:CDS |
| ATGTTGATAATCTTCCTAAC+GGG | 0.524290 | 5:+3394801 | MsG0580024323.01.T01:CDS |
| AGACATTTGTTTCATAGGGA+AGG | 0.529304 | 5:-3396429 | None:intergenic |
| GTCTGACTTATTTACCTCAA+AGG | 0.532138 | 5:-3398682 | None:intergenic |
| TAAGTTGTAAGAGATCCTTT+GGG | 0.536088 | 5:+3399350 | MsG0580024323.01.T01:three_prime_UTR |
| CTCTACTTCATGCTCAAGGA+CGG | 0.537992 | 5:-3396161 | None:intergenic |
| CCAATACTTCACAGGACAGA+AGG | 0.538946 | 5:+3396387 | MsG0580024323.01.T01:CDS |
| CTTGTGCCAGTCATTAGATG+TGG | 0.540300 | 5:-3396199 | None:intergenic |
| GCTGCTCGATTAGCAGCTGC+TGG | 0.544833 | 5:+3398848 | MsG0580024323.01.T01:CDS |
| AGTGGGAGTGACGGCGACGG+TGG | 0.547039 | 5:+3394565 | MsG0580024323.01.T01:CDS |
| GCCGGTTTAGCTTCTGAAGG+TGG | 0.550536 | 5:+3394752 | MsG0580024323.01.T01:CDS |
| TTTCAACGCCGTTCGTACTG+AGG | 0.551274 | 5:+3397755 | MsG0580024323.01.T01:CDS |
| TATGTTGATAATCTTCCTAA+CGG | 0.553392 | 5:+3394800 | MsG0580024323.01.T01:CDS |
| AAGCTTTAAACGAAATATTG+GGG | 0.554190 | 5:+3399023 | MsG0580024323.01.T01:CDS |
| AAGATTGGTCGTGACGGGAG+TGG | 0.556777 | 5:+3398890 | MsG0580024323.01.T01:CDS |
| GCATCACAGGTGGACGGAGT+AGG | 0.560009 | 5:+3398915 | MsG0580024323.01.T01:CDS |
| AGAACGAATTCTGATTTACA+GGG | 0.561090 | 5:-3399211 | None:intergenic |
| TGTTGATATATATAAATAGC+AGG | 0.566775 | 5:-3399153 | None:intergenic |
| TCTACTTCATGCTCAAGGAC+GGG | 0.569738 | 5:-3396160 | None:intergenic |
| TTTGATGGCTGCCATGCATG+AGG | 0.574951 | 5:+3398614 | MsG0580024323.01.T01:CDS |
| GTGTTGAAAGAGTTTGAAGA+AGG | 0.576656 | 5:+3394668 | MsG0580024323.01.T01:CDS |
| TCTCAGGATGTCACTAGAGT+CGG | 0.577140 | 5:+3397705 | MsG0580024323.01.T01:CDS |
| GTCGCTCTACTTCATGCTCA+AGG | 0.578601 | 5:-3396165 | None:intergenic |
| TAGGTTGTCAATATGGAATG+GGG | 0.578992 | 5:+3397469 | MsG0580024323.01.T01:intron |
| ATGATATCAGGAATGTATCT+CGG | 0.579708 | 5:+3397661 | MsG0580024323.01.T01:CDS |
| TCATGCATGGCAGCCATCAA+AGG | 0.579757 | 5:-3398612 | None:intergenic |
| TCATGCTCAAGGACGGGAGA+TGG | 0.579799 | 5:-3396154 | None:intergenic |
| GCTGCAATAGTCATTGGTAC+TGG | 0.581228 | 5:+3397291 | MsG0580024323.01.T01:CDS |
| TGTTGGAAGGTTAAGGCAAG+TGG | 0.583503 | 5:+3394703 | MsG0580024323.01.T01:CDS |
| TTGTGCCAGTCATTAGATGT+GGG | 0.585935 | 5:-3396198 | None:intergenic |
| AAGATGGGAAGAGTGGTAGT+GGG | 0.588287 | 5:+3394548 | None:intergenic |
| GTGGTGGCATCACAGGTGGA+CGG | 0.589673 | 5:+3398909 | MsG0580024323.01.T01:CDS |
| CACGCCGGTTTAGCTTCTGA+AGG | 0.591635 | 5:+3394749 | MsG0580024323.01.T01:CDS |
| TTGAAGAAGATTGGTCGTGA+CGG | 0.592268 | 5:+3398884 | MsG0580024323.01.T01:CDS |
| AGATGGTTCCAATACTTCAC+AGG | 0.592323 | 5:+3396379 | MsG0580024323.01.T01:CDS |
| GTGACTAACCATATCTACAA+TGG | 0.594940 | 5:-3396492 | None:intergenic |
| GTTAGGAAGATTATCAACAT+AGG | 0.595626 | 5:-3394798 | None:intergenic |
| AGTGGTTGATGCTATGGCGG+TGG | 0.596296 | 5:+3394721 | MsG0580024323.01.T01:CDS |
| ATTGGTCGTGACGGGAGTGG+TGG | 0.597920 | 5:+3398893 | MsG0580024323.01.T01:CDS |
| GAAGGTTGTGATACGAGTGT+TGG | 0.604021 | 5:+3394686 | MsG0580024323.01.T01:CDS |
| GTTGTGATACGAGTGTTGGA+AGG | 0.610760 | 5:+3394690 | MsG0580024323.01.T01:CDS |
| GGGAGTGGTGGCATCACAGG+TGG | 0.611199 | 5:+3398905 | MsG0580024323.01.T01:CDS |
| ACAGTTGTGGCAATTGAAGG+AGG | 0.611717 | 5:+3398959 | MsG0580024323.01.T01:CDS |
| ACTGTTGGAACATTAGCTGT+TGG | 0.612811 | 5:+3397243 | MsG0580024323.01.T01:CDS |
| AGGTTGTCAATATGGAATGG+GGG | 0.613620 | 5:+3397470 | MsG0580024323.01.T01:intron |
| AGGTGAATCATCCTCATGCA+TGG | 0.614958 | 5:-3398625 | None:intergenic |
| GTGCCAGTCATTAGATGTGG+GGG | 0.615915 | 5:-3396196 | None:intergenic |
| GTGTGATGTGGTGACTCGTA+GGG | 0.616871 | 5:+3398826 | MsG0580024323.01.T01:CDS |
| GCCGCTCTGCACGTAAAGCA+GGG | 0.618032 | 5:-3399493 | None:intergenic |
| TCTAATGACTGGCACAAGCA+AGG | 0.620748 | 5:+3396204 | MsG0580024323.01.T01:CDS |
| TGTATCTCGGTGACATCGTG+AGG | 0.623745 | 5:+3397674 | MsG0580024323.01.T01:CDS |
| ATCGGTGAAGATGGGAAGAG+TGG | 0.624776 | 5:+3394541 | None:intergenic |
| TGTGTGATGTGGTGACTCGT+AGG | 0.625058 | 5:+3398825 | MsG0580024323.01.T01:CDS |
| AAGAGTGGTAGTGGGAGTGA+CGG | 0.625333 | 5:+3394556 | MsG0580024323.01.T01:CDS |
| AAAATTTGTTGTAATCTGGG+AGG | 0.626024 | 5:+3399440 | MsG0580024323.01.T01:three_prime_UTR |
| CGAAGATGGATCAGGCATTG+GGG | 0.630238 | 5:+3399081 | MsG0580024323.01.T01:CDS |
| TCTTACAACATCAGGACGCA+TGG | 0.630747 | 5:+3397368 | MsG0580024323.01.T01:CDS |
| CAATACTTCACAGGACAGAA+GGG | 0.631867 | 5:+3396388 | MsG0580024323.01.T01:CDS |
| GATGCTATTATCAAGTGTCA+GGG | 0.635033 | 5:+3397342 | MsG0580024323.01.T01:CDS |
| TTACCTCAAAGGTGTCGTTG+AGG | 0.645156 | 5:-3398671 | None:intergenic |
| ATGGCGGTGGAGATGCACGC+CGG | 0.645387 | 5:+3394734 | MsG0580024323.01.T01:CDS |
| CCACTTGATTAAAATGCCCG+AGG | 0.646430 | 5:-3396456 | None:intergenic |
| TGTTGTGAAGGTGTGTGATG+TGG | 0.646930 | 5:+3398814 | MsG0580024323.01.T01:CDS |
| GGTAGTGGGAGTGACGGCGA+CGG | 0.652117 | 5:+3394562 | MsG0580024323.01.T01:CDS |
| CTATTGCATTTACAACCCAA+AGG | 0.653388 | 5:-3399365 | None:intergenic |
| TATTATGCGCTGCATCTTGG+GGG | 0.666308 | 5:+3396091 | MsG0580024323.01.T01:CDS |
| GGTACAAACCTCAGTACGAA+CGG | 0.676112 | 5:-3397763 | None:intergenic |
| AGCTTTAAACGAAATATTGG+GGG | 0.680619 | 5:+3399024 | MsG0580024323.01.T01:CDS |
| GCAAGTGGTTGATGCTATGG+CGG | 0.693157 | 5:+3394718 | MsG0580024323.01.T01:CDS |
| TGTGCCAGTCATTAGATGTG+GGG | 0.693796 | 5:-3396197 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAGATATCTTAATT+TGG | + | Chr5:3397120-3397139 | MsG0580024323.01.T01:intron | 10.0% |
| !! | AGTAATATAATGAAACAAAT+AGG | - | Chr5:3397182-3397201 | None:intergenic | 15.0% |
| !! | TAAATGATAATAGTTGTAAA+TGG | + | Chr5:3397033-3397052 | MsG0580024323.01.T01:intron | 15.0% |
| !! | TTAATTCTATAATAGTGAAA+TGG | + | Chr5:3397006-3397025 | MsG0580024323.01.T01:intron | 15.0% |
| !! | TTCAATGTCTAAAAAAATTA+AGG | - | Chr5:3398040-3398059 | None:intergenic | 15.0% |
| !!! | AAAAGTTTTTGTATAAAAGA+AGG | - | Chr5:3396988-3397007 | None:intergenic | 15.0% |
| !!! | AGTTCTTATTTTTCATTTTT+GGG | + | Chr5:3397410-3397429 | MsG0580024323.01.T01:intron | 15.0% |
| !!! | GTTTTTTGATTTATTATGTT+TGG | + | Chr5:3394945-3394964 | MsG0580024323.01.T01:intron | 15.0% |
| !!! | TCTTAATTGATCTTTAAAAT+TGG | + | Chr5:3396522-3396541 | MsG0580024323.01.T01:intron | 15.0% |
| !! | AAAACCATATATCTTGTATT+TGG | + | Chr5:3398750-3398769 | MsG0580024323.01.T01:intron | 20.0% |
| !! | AAACAAACCAATTTAACAAA+AGG | - | Chr5:3396041-3396060 | None:intergenic | 20.0% |
| !! | ACTATTAACTTAGTTAATGA+AGG | - | Chr5:3398084-3398103 | None:intergenic | 20.0% |
| !! | ATATTCTTAAAAATGTGGAT+AGG | + | Chr5:3399123-3399142 | MsG0580024323.01.T01:exon | 20.0% |
| !! | CTATTAACTTAGTTAATGAA+GGG | - | Chr5:3398083-3398102 | None:intergenic | 20.0% |
| !! | TATTCTTAAAAATGTGGATA+GGG | + | Chr5:3399124-3399143 | MsG0580024323.01.T01:exon | 20.0% |
| !! | TATTTAATATCTCTGTATAG+AGG | + | Chr5:3399237-3399256 | MsG0580024323.01.T01:three_prime_UTR | 20.0% |
| !! | TGTTCTGTTATTCAATAAAA+AGG | + | Chr5:3397854-3397873 | MsG0580024323.01.T01:intron | 20.0% |
| !! | TGTTGATATATATAAATAGC+AGG | - | Chr5:3399156-3399175 | None:intergenic | 20.0% |
| !! | TTTAACGTTATTACATGAAA+AGG | - | Chr5:3396290-3396309 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTGTCCCTAAAT+GGG | + | Chr5:3398708-3398727 | MsG0580024323.01.T01:intron | 20.0% |
| !!! | ATGTTTTTGATCTAAATGTA+AGG | + | Chr5:3396920-3396939 | MsG0580024323.01.T01:intron | 20.0% |
| !!! | ATTTGTTATGACTAAAACTT+TGG | + | Chr5:3397612-3397631 | MsG0580024323.01.T01:intron | 20.0% |
| !!! | CAGTTCTTATTTTTCATTTT+TGG | + | Chr5:3397409-3397428 | MsG0580024323.01.T01:intron | 20.0% |
| !!! | GTCATTTTCTCAAATTTTAT+CGG | + | Chr5:3395570-3395589 | MsG0580024323.01.T01:intron | 20.0% |
| !!! | TATATGGTTTTTAGATTTAC+AGG | - | Chr5:3398741-3398760 | None:intergenic | 20.0% |
| !!! | TGAAAAATTTGTTGTAATCT+GGG | + | Chr5:3399437-3399456 | MsG0580024323.01.T01:three_prime_UTR | 20.0% |
| !!! | TTGAAAAATTTGTTGTAATC+TGG | + | Chr5:3399436-3399455 | MsG0580024323.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTTTGATTTCATTTTAAGC+AGG | + | Chr5:3397212-3397231 | MsG0580024323.01.T01:intron | 20.0% |
| ! | AAAAATGAAAAGAACAGTTG+TGG | + | Chr5:3398946-3398965 | MsG0580024323.01.T01:CDS | 25.0% |
| ! | AAACAGACATTTGTTTCATA+GGG | - | Chr5:3396436-3396455 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGACAAAAC+TGG | - | Chr5:3395005-3395024 | None:intergenic | 25.0% |
| ! | ACAAAAACATAGACAAAACT+GGG | - | Chr5:3395004-3395023 | None:intergenic | 25.0% |
| ! | AGAAAAAAACAATCTGTTGA+AGG | - | Chr5:3396889-3396908 | None:intergenic | 25.0% |
| ! | CATTTAGGGACAAAAAAATA+TGG | - | Chr5:3398709-3398728 | None:intergenic | 25.0% |
| ! | GAAAAACACATCATACAATT+AGG | - | Chr5:3396765-3396784 | None:intergenic | 25.0% |
| ! | GCATCATATTCTTAAAAATG+TGG | + | Chr5:3399118-3399137 | MsG0580024323.01.T01:exon | 25.0% |
| ! | GGATTTGGACATTTAATAAA+TGG | + | Chr5:3395205-3395224 | MsG0580024323.01.T01:intron | 25.0% |
| ! | GTTGTAAATGCAATAGTATT+AGG | + | Chr5:3399372-3399391 | MsG0580024323.01.T01:three_prime_UTR | 25.0% |
| ! | TATGTATTATACCTTAATCC+CGG | - | Chr5:3396842-3396861 | None:intergenic | 25.0% |
| ! | TATTCAATAAAAAGGCAATC+TGG | + | Chr5:3397862-3397881 | MsG0580024323.01.T01:intron | 25.0% |
| ! | TGTTTATGGAAAATGTACTT+TGG | + | Chr5:3395184-3395203 | MsG0580024323.01.T01:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | Chr5:3395546-3395565 | None:intergenic | 25.0% |
| !! | AAATTGAATTTTATGCTTGC+AGG | + | Chr5:3396307-3396326 | MsG0580024323.01.T01:intron | 25.0% |
| !! | AATTGACTTTGCTATAAACT+TGG | + | Chr5:3398278-3398297 | MsG0580024323.01.T01:intron | 25.0% |
| !! | ATTTTTCTTTTAGCACACAA+GGG | + | Chr5:3398233-3398252 | MsG0580024323.01.T01:intron | 25.0% |
| !! | TATTTTTCTTTTAGCACACA+AGG | + | Chr5:3398232-3398251 | MsG0580024323.01.T01:intron | 25.0% |
| !! | TTTCTCAAATTTTATCGGTA+TGG | + | Chr5:3395575-3395594 | MsG0580024323.01.T01:intron | 25.0% |
| !! | TTTTAATCAAGTGGACAAAA+GGG | + | Chr5:3396465-3396484 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | AAGCTTTAAACGAAATATTG+GGG | + | Chr5:3399023-3399042 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | ATTTTAATCAAGTGGACAAA+AGG | + | Chr5:3396464-3396483 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | CAACAGATTGTTTTTTTCTA+GGG | + | Chr5:3396890-3396909 | MsG0580024323.01.T01:intron | 25.0% |
| !!! | CATATTTTTTTGTCCCTAAA+TGG | + | Chr5:3398707-3398726 | MsG0580024323.01.T01:intron | 25.0% |
| !!! | GAAGCTTTAAACGAAATATT+GGG | + | Chr5:3399022-3399041 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | TATGTTGATAATCTTCCTAA+CGG | + | Chr5:3394800-3394819 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | TCAACAGATTGTTTTTTTCT+AGG | + | Chr5:3396889-3396908 | MsG0580024323.01.T01:intron | 25.0% |
| !!! | TGAAGCTTTAAACGAAATAT+TGG | + | Chr5:3399021-3399040 | MsG0580024323.01.T01:CDS | 25.0% |
| !!! | TTTTTTATCAGTACTGAGAA+AGG | + | Chr5:3396064-3396083 | MsG0580024323.01.T01:intron | 25.0% |
| AAAAAACAATCTGTTGAAGG+CGG | - | Chr5:3396886-3396905 | None:intergenic | 30.0% | |
| AAGAACGAATTCTGATTTAC+AGG | - | Chr5:3399215-3399234 | None:intergenic | 30.0% | |
| ACAGCCAAATACAAGATATA+TGG | - | Chr5:3398757-3398776 | None:intergenic | 30.0% | |
| ACCAAATCTTGCTAAAGATA+AGG | - | Chr5:3395955-3395974 | None:intergenic | 30.0% | |
| ACCAATTTAACAAAAGGACT+CGG | - | Chr5:3396035-3396054 | None:intergenic | 30.0% | |
| AGAACGAATTCTGATTTACA+GGG | - | Chr5:3399214-3399233 | None:intergenic | 30.0% | |
| AGTCTATGACAGCTATTTAT+TGG | + | Chr5:3395757-3395776 | MsG0580024323.01.T01:intron | 30.0% | |
| ATAAGTTGTAAGAGATCCTT+TGG | + | Chr5:3399349-3399368 | MsG0580024323.01.T01:three_prime_UTR | 30.0% | |
| ATCAAAACAAGAAAAGCCAA+AGG | - | Chr5:3398322-3398341 | None:intergenic | 30.0% | |
| ATCAAGCAACAAAAGTCATT+AGG | - | Chr5:3397587-3397606 | None:intergenic | 30.0% | |
| ATCTTGGTTATACAAAGCAT+TGG | + | Chr5:3397954-3397973 | MsG0580024323.01.T01:intron | 30.0% | |
| ATGATATCAGGAATGTATCT+CGG | + | Chr5:3397661-3397680 | MsG0580024323.01.T01:CDS | 30.0% | |
| ATTGAATAACAGAACACATC+TGG | - | Chr5:3397850-3397869 | None:intergenic | 30.0% | |
| CATATTGACAACCTAAAAGA+CGG | - | Chr5:3397464-3397483 | None:intergenic | 30.0% | |
| GAAACAGACATTTGTTTCAT+AGG | - | Chr5:3396437-3396456 | None:intergenic | 30.0% | |
| GAATTCATTGCTAAAGAAGA+TGG | + | Chr5:3396362-3396381 | MsG0580024323.01.T01:CDS | 30.0% | |
| GCTGATAAGATATATTTCCT+TGG | + | Chr5:3398503-3398522 | MsG0580024323.01.T01:intron | 30.0% | |
| GGAAAACATACTTGATACTA+TGG | + | Chr5:3397824-3397843 | MsG0580024323.01.T01:intron | 30.0% | |
| GTCTATGACAGCTATTTATT+GGG | + | Chr5:3395758-3395777 | MsG0580024323.01.T01:intron | 30.0% | |
| GTGTACATAGAATAGAATAC+AGG | - | Chr5:3398398-3398417 | None:intergenic | 30.0% | |
| GTTAGGAAGATTATCAACAT+AGG | - | Chr5:3394801-3394820 | None:intergenic | 30.0% | |
| GTTTCATCTATTCTTTGATC+AGG | + | Chr5:3399259-3399278 | MsG0580024323.01.T01:three_prime_UTR | 30.0% | |
| TAACCTGATCATTTGGATTA+GGG | - | Chr5:3397555-3397574 | None:intergenic | 30.0% | |
| TAAGTTGTAAGAGATCCTTT+GGG | + | Chr5:3399350-3399369 | MsG0580024323.01.T01:three_prime_UTR | 30.0% | |
| TATGTATGACCAATGTCTTT+AGG | + | Chr5:3397803-3397822 | MsG0580024323.01.T01:intron | 30.0% | |
| TATGTTTCATGCACTACAAT+TGG | - | Chr5:3398135-3398154 | None:intergenic | 30.0% | |
| TCAAATTCAAACCAGAGATT+TGG | - | Chr5:3398566-3398585 | None:intergenic | 30.0% | |
| TCCTTATCTTTAGCAAGATT+TGG | + | Chr5:3395951-3395970 | MsG0580024323.01.T01:intron | 30.0% | |
| TGATCAAAACCCTAAAACTT+TGG | + | Chr5:3396232-3396251 | MsG0580024323.01.T01:intron | 30.0% | |
| TGATTGATAGATTGTGTGTT+TGG | + | Chr5:3395692-3395711 | MsG0580024323.01.T01:intron | 30.0% | |
| TGGAAAATGTACTTTGGATT+TGG | + | Chr5:3395190-3395209 | MsG0580024323.01.T01:intron | 30.0% | |
| TTGATAGATTGTGTTTGGAT+TGG | + | Chr5:3395306-3395325 | MsG0580024323.01.T01:intron | 30.0% | |
| ! | ACAATTTTTCTTGCCTTCAA+TGG | - | Chr5:3398797-3398816 | None:intergenic | 30.0% |
| ! | ACCTATTGTTGTTCTATTGT+AGG | + | Chr5:3397924-3397943 | MsG0580024323.01.T01:intron | 30.0% |
| ! | CAGAGAAAACCAAAGTTTTA+GGG | - | Chr5:3396244-3396263 | None:intergenic | 30.0% |
| ! | GACTAAAACTTTGGTGATTT+GGG | + | Chr5:3397621-3397640 | MsG0580024323.01.T01:intron | 30.0% |
| ! | GCTTGTTTGGTAACTATTTA+TGG | - | Chr5:3396566-3396585 | None:intergenic | 30.0% |
| ! | GTATGTTTTCCTAAAGACAT+TGG | - | Chr5:3397815-3397834 | None:intergenic | 30.0% |
| ! | TAATTTGCAAGCTGTAAGAA+TGG | + | Chr5:3395283-3395302 | MsG0580024323.01.T01:intron | 30.0% |
| ! | TGACTAAAACTTTGGTGATT+TGG | + | Chr5:3397620-3397639 | MsG0580024323.01.T01:intron | 30.0% |
| ! | TTAGGTTGTCAATATGGAAT+GGG | + | Chr5:3397468-3397487 | MsG0580024323.01.T01:intron | 30.0% |
| ! | TTTTTCTTTTAGCACACAAG+GGG | + | Chr5:3398234-3398253 | MsG0580024323.01.T01:intron | 30.0% |
| !! | AAAATTTGTTGTAATCTGGG+AGG | + | Chr5:3399440-3399459 | MsG0580024323.01.T01:three_prime_UTR | 30.0% |
| !! | AATGGTTGATAGATTGTGTT+TGG | + | Chr5:3395301-3395320 | MsG0580024323.01.T01:intron | 30.0% |
| !! | AATTTGGTGTGAAGGAAAAT+GGG | + | Chr5:3397136-3397155 | MsG0580024323.01.T01:intron | 30.0% |
| !! | AGCTTTAAACGAAATATTGG+GGG | + | Chr5:3399024-3399043 | MsG0580024323.01.T01:CDS | 30.0% |
| !! | ATGTTGATAATCTTCCTAAC+GGG | + | Chr5:3394801-3394820 | MsG0580024323.01.T01:CDS | 30.0% |
| !! | GAACTTATTTTCCGTCTTTT+AGG | + | Chr5:3397450-3397469 | MsG0580024323.01.T01:intron | 30.0% |
| !! | GATATCTTAATTTGGTGTGA+AGG | + | Chr5:3397128-3397147 | MsG0580024323.01.T01:intron | 30.0% |
| !! | GTTATACAAAGCATTGGAAA+AGG | + | Chr5:3397960-3397979 | MsG0580024323.01.T01:intron | 30.0% |
| !! | TAATTTGGTGTGAAGGAAAA+TGG | + | Chr5:3397135-3397154 | MsG0580024323.01.T01:intron | 30.0% |
| !! | TATTGTAGGCAGTTTTATCT+TGG | + | Chr5:3397938-3397957 | MsG0580024323.01.T01:intron | 30.0% |
| !! | TGGTTTTTAGATTTACAGGA+AGG | - | Chr5:3398737-3398756 | None:intergenic | 30.0% |
| !! | TTTAGGTTGTCAATATGGAA+TGG | + | Chr5:3397467-3397486 | MsG0580024323.01.T01:intron | 30.0% |
| !!! | ATTGTGTTTGGATTGGTTTT+GGG | + | Chr5:3395313-3395332 | MsG0580024323.01.T01:intron | 30.0% |
| !!! | GGTTTTGAGAAAATGATATC+AGG | + | Chr5:3397649-3397668 | MsG0580024323.01.T01:CDS | 30.0% |
| AAACAAATGTCTGTTTCCTC+GGG | + | Chr5:3396440-3396459 | MsG0580024323.01.T01:CDS | 35.0% | |
| AAACATAGACAAAACTGGGA+AGG | - | Chr5:3395000-3395019 | None:intergenic | 35.0% | |
| AAACCAAGTGCAACTTGAAT+AGG | - | Chr5:3396597-3396616 | None:intergenic | 35.0% | |
| AACCTGACAACAAATAGCTT+TGG | - | Chr5:3396649-3396668 | None:intergenic | 35.0% | |
| AAGCAGGTTAATGATACTGT+TGG | + | Chr5:3397228-3397247 | MsG0580024323.01.T01:intron | 35.0% | |
| AAGCATCTCTTATGTGTCTA+GGG | + | Chr5:3397892-3397911 | MsG0580024323.01.T01:intron | 35.0% | |
| ACCTGACAACAAATAGCTTT+GGG | - | Chr5:3396648-3396667 | None:intergenic | 35.0% | |
| AGAAAAAGTGATTACCCGTT+AGG | - | Chr5:3394818-3394837 | None:intergenic | 35.0% | |
| AGACATTTGTTTCATAGGGA+AGG | - | Chr5:3396432-3396451 | None:intergenic | 35.0% | |
| AGTAGCATATACAAATCCAC+CGG | - | Chr5:3395905-3395924 | None:intergenic | 35.0% | |
| ATAGGACATACATGCTTGTT+TGG | - | Chr5:3396579-3396598 | None:intergenic | 35.0% | |
| ATGACAGCTATTTATTGGGA+TGG | + | Chr5:3395762-3395781 | MsG0580024323.01.T01:intron | 35.0% | |
| ATTCTTAATGTCACCGAAGA+TGG | + | Chr5:3399067-3399086 | MsG0580024323.01.T01:CDS | 35.0% | |
| CAAAACCTAACCTGATCATT+TGG | - | Chr5:3397562-3397581 | None:intergenic | 35.0% | |
| CACATCATACAATTAGGCTA+AGG | - | Chr5:3396759-3396778 | None:intergenic | 35.0% | |
| CATACAATTAGGCTAAGGAA+AGG | - | Chr5:3396754-3396773 | None:intergenic | 35.0% | |
| CATAGTGTATGACTGAGAAT+CGG | - | Chr5:3397787-3397806 | None:intergenic | 35.0% | |
| CTAACCTGATCATTTGGATT+AGG | - | Chr5:3397556-3397575 | None:intergenic | 35.0% | |
| CTAATCCAAATGATCAGGTT+AGG | + | Chr5:3397554-3397573 | MsG0580024323.01.T01:intron | 35.0% | |
| CTATTGCATTTACAACCCAA+AGG | - | Chr5:3399368-3399387 | None:intergenic | 35.0% | |
| CTTTCTTTCATATCCTCTTG+TGG | + | Chr5:3398183-3398202 | MsG0580024323.01.T01:intron | 35.0% | |
| GAAACAAATGTCTGTTTCCT+CGG | + | Chr5:3396439-3396458 | MsG0580024323.01.T01:CDS | 35.0% | |
| GATAGATTGTGTGTTTGGAT+TGG | + | Chr5:3395697-3395716 | MsG0580024323.01.T01:intron | 35.0% | |
| GATGCTATTATCAAGTGTCA+GGG | + | Chr5:3397342-3397361 | MsG0580024323.01.T01:CDS | 35.0% | |
| GCAATGAAAAACACCTAACA+TGG | - | Chr5:3395099-3395118 | None:intergenic | 35.0% | |
| GCCTACAATAGAACAACAAT+AGG | - | Chr5:3397928-3397947 | None:intergenic | 35.0% | |
| GGCAAGAAAAATTGTTGTGA+AGG | + | Chr5:3398802-3398821 | MsG0580024323.01.T01:CDS | 35.0% | |
| GTCTGACTTATTTACCTCAA+AGG | - | Chr5:3398685-3398704 | None:intergenic | 35.0% | |
| GTGACTAACCATATCTACAA+TGG | - | Chr5:3396495-3396514 | None:intergenic | 35.0% | |
| GTGTTGAAAGAGTTTGAAGA+AGG | + | Chr5:3394668-3394687 | MsG0580024323.01.T01:CDS | 35.0% | |
| GTTGAAAGCTTCGAAGAAAT+AGG | - | Chr5:3397742-3397761 | None:intergenic | 35.0% | |
| GTTGTCTATTTCATGCTTTC+TGG | + | Chr5:3395069-3395088 | MsG0580024323.01.T01:intron | 35.0% | |
| TAGGTTGTCAATATGGAATG+GGG | + | Chr5:3397469-3397488 | MsG0580024323.01.T01:intron | 35.0% | |
| TATGAAGCACATATACTCCT+CGG | + | Chr5:3395466-3395485 | MsG0580024323.01.T01:intron | 35.0% | |
| TCAATGTCATACTGTGTTCT+TGG | - | Chr5:3397517-3397536 | None:intergenic | 35.0% | |
| TGACAGCTATTTATTGGGAT+GGG | + | Chr5:3395763-3395782 | MsG0580024323.01.T01:intron | 35.0% | |
| TGATGCTATTATCAAGTGTC+AGG | + | Chr5:3397341-3397360 | MsG0580024323.01.T01:CDS | 35.0% | |
| TGGAACATTGTAGTTATCCA+AGG | - | Chr5:3398523-3398542 | None:intergenic | 35.0% | |
| TTACATATGACAACTGCCTT+TGG | + | Chr5:3398303-3398322 | MsG0580024323.01.T01:intron | 35.0% | |
| TTGCCTTATACTTACACAAC+CGG | + | Chr5:3396820-3396839 | MsG0580024323.01.T01:intron | 35.0% | |
| TTGCTTTCAGAGGGAAATAT+TGG | - | Chr5:3396797-3396816 | None:intergenic | 35.0% | |
| TTGTAGTGCATGAAACATAG+TGG | + | Chr5:3398136-3398155 | MsG0580024323.01.T01:intron | 35.0% | |
| ! | AAAGCATCTCTTATGTGTCT+AGG | + | Chr5:3397891-3397910 | MsG0580024323.01.T01:intron | 35.0% |
| ! | ACCGAGTCCTTTTGTTAAAT+TGG | + | Chr5:3396031-3396050 | MsG0580024323.01.T01:intron | 35.0% |
| ! | AGGGTTTTCCATTGTAGATA+TGG | + | Chr5:3396484-3396503 | MsG0580024323.01.T01:CDS | 35.0% |
| ! | AGGTGATTCATGATTTGTGT+CGG | + | Chr5:3395638-3395657 | MsG0580024323.01.T01:intron | 35.0% |
| ! | ATCTTGGGGGAACAAATTTT+AGG | + | Chr5:3396104-3396123 | MsG0580024323.01.T01:CDS | 35.0% |
| ! | GCAGAGAAAACCAAAGTTTT+AGG | - | Chr5:3396245-3396264 | None:intergenic | 35.0% |
| ! | TCTGAAACTCTTGTCATTTC+AGG | + | Chr5:3398586-3398605 | MsG0580024323.01.T01:intron | 35.0% |
| ! | TCTTGGGGGAACAAATTTTA+GGG | + | Chr5:3396105-3396124 | MsG0580024323.01.T01:CDS | 35.0% |
| !! | AAAGCTATTTGTTGTCAGGT+TGG | + | Chr5:3396648-3396667 | MsG0580024323.01.T01:intron | 35.0% |
| !! | GTTCAACAGTGTCATTTCAA+CGG | + | Chr5:3394967-3394986 | MsG0580024323.01.T01:intron | 35.0% |
| !!! | AACAAATTTTAGGGTAACGC+GGG | + | Chr5:3396114-3396133 | MsG0580024323.01.T01:CDS | 35.0% |
| !!! | ATGCACAGTTTGTTTTTTCC+TGG | + | Chr5:3398439-3398458 | MsG0580024323.01.T01:intron | 35.0% |
| !!! | CGTCTTTTAGGTTGTCAATA+TGG | + | Chr5:3397462-3397481 | MsG0580024323.01.T01:intron | 35.0% |
| !!! | GAACAAATTTTAGGGTAACG+CGG | + | Chr5:3396113-3396132 | MsG0580024323.01.T01:CDS | 35.0% |
| !!! | GATTGTGTTTGGATTGGTTT+TGG | + | Chr5:3395312-3395331 | MsG0580024323.01.T01:intron | 35.0% |
| !!! | GTTTTTTCCTGGAGTATTTG+AGG | + | Chr5:3398450-3398469 | MsG0580024323.01.T01:intron | 35.0% |
| AAGCCCTAATCCAAATGATC+AGG | + | Chr5:3397549-3397568 | MsG0580024323.01.T01:CDS | 40.0% | |
| AATGCCAACCAGTAAATAGC+TGG | - | Chr5:3395379-3395398 | None:intergenic | 40.0% | |
| ACACTCGAACATTTGTTTGC+TGG | + | Chr5:3398367-3398386 | MsG0580024323.01.T01:intron | 40.0% | |
| ACTAGATCTGCCAATCAAGA+AGG | + | Chr5:3395874-3395893 | MsG0580024323.01.T01:intron | 40.0% | |
| ACTGTTGCTGCAATAGTCAT+TGG | + | Chr5:3397285-3397304 | MsG0580024323.01.T01:CDS | 40.0% | |
| ACTGTTGGAACATTAGCTGT+TGG | + | Chr5:3397243-3397262 | MsG0580024323.01.T01:CDS | 40.0% | |
| AGAACAGTTGTGGCAATTGA+AGG | + | Chr5:3398956-3398975 | MsG0580024323.01.T01:CDS | 40.0% | |
| AGATGGTTCCAATACTTCAC+AGG | + | Chr5:3396379-3396398 | MsG0580024323.01.T01:CDS | 40.0% | |
| AGGAAAGGAATTCCTTACCA+AGG | - | Chr5:3396739-3396758 | None:intergenic | 40.0% | |
| AGGTTGTCAATATGGAATGG+GGG | + | Chr5:3397470-3397489 | MsG0580024323.01.T01:intron | 40.0% | |
| AGTCTATGCCAGCTATTTAC+TGG | + | Chr5:3395368-3395387 | MsG0580024323.01.T01:intron | 40.0% | |
| ATATTATGCGCTGCATCTTG+GGG | + | Chr5:3396090-3396109 | MsG0580024323.01.T01:CDS | 40.0% | |
| ATCCCGGTTGTGTAAGTATA+AGG | - | Chr5:3396826-3396845 | None:intergenic | 40.0% | |
| CAATAAAAAGGCAATCTGGC+AGG | + | Chr5:3397866-3397885 | MsG0580024323.01.T01:intron | 40.0% | |
| CAATACTTCACAGGACAGAA+GGG | + | Chr5:3396388-3396407 | MsG0580024323.01.T01:CDS | 40.0% | |
| CATATTATGCGCTGCATCTT+GGG | + | Chr5:3396089-3396108 | MsG0580024323.01.T01:CDS | 40.0% | |
| CATGAATCACCTATGAAGCA+TGG | - | Chr5:3395630-3395649 | None:intergenic | 40.0% | |
| CTGTTGGAACATTAGCTGTT+GGG | + | Chr5:3397244-3397263 | MsG0580024323.01.T01:CDS | 40.0% | |
| CTTGCTAAAGATAAGGAGTG+CGG | - | Chr5:3395948-3395967 | None:intergenic | 40.0% | |
| GAGTGAAGAGTAGAAGAAAG+TGG | + | Chr5:3394630-3394649 | MsG0580024323.01.T01:CDS | 40.0% | |
| GATTAGGTGTGTCCTTATGT+CGG | + | Chr5:3395488-3395507 | MsG0580024323.01.T01:intron | 40.0% | |
| GATTCCAGATCTTCCATTGA+AGG | + | Chr5:3398781-3398800 | MsG0580024323.01.T01:intron | 40.0% | |
| GTAGCATATACAAATCCACC+GGG | - | Chr5:3395904-3395923 | None:intergenic | 40.0% | |
| GTTGGCATCTTGAAGAAGAT+TGG | + | Chr5:3398875-3398894 | MsG0580024323.01.T01:CDS | 40.0% | |
| TACTTACACAACCGGGATTA+AGG | + | Chr5:3396828-3396847 | MsG0580024323.01.T01:intron | 40.0% | |
| TATGCCAGCTATTTACTGGT+TGG | + | Chr5:3395372-3395391 | MsG0580024323.01.T01:intron | 40.0% | |
| TCACTAGAGTCGGATATGTT+TGG | + | Chr5:3397715-3397734 | MsG0580024323.01.T01:CDS | 40.0% | |
| TCATTTCAGGACTCCTTTGA+TGG | + | Chr5:3398599-3398618 | MsG0580024323.01.T01:intron | 40.0% | |
| TCTCTTATGTGTCTAGGGAA+TGG | + | Chr5:3397897-3397916 | MsG0580024323.01.T01:intron | 40.0% | |
| TGCCTTATACTTACACAACC+GGG | + | Chr5:3396821-3396840 | MsG0580024323.01.T01:intron | 40.0% | |
| TTGTGCCAGTCATTAGATGT+GGG | - | Chr5:3396201-3396220 | None:intergenic | 40.0% | |
| ! | AGTCGTCTTATTACCACAAG+AGG | - | Chr5:3398199-3398218 | None:intergenic | 40.0% |
| ! | ATATGGAATGGGGGAACTTT+TGG | + | Chr5:3397479-3397498 | MsG0580024323.01.T01:CDS | 40.0% |
| ! | CAGCCTATGCATCATTTTCA+CGG | - | Chr5:3398487-3398506 | None:intergenic | 40.0% |
| ! | CTTAGTTAATGAAGGGCGTA+TGG | - | Chr5:3398076-3398095 | None:intergenic | 40.0% |
| ! | CTTGCTACTTCTATCAAGTC+AGG | - | Chr5:3398648-3398667 | None:intergenic | 40.0% |
| ! | TTGAAGAAGATTGGTCGTGA+CGG | + | Chr5:3398884-3398903 | MsG0580024323.01.T01:CDS | 40.0% |
| !! | ACCCAAAGCTATTTGTTGTC+AGG | + | Chr5:3396644-3396663 | MsG0580024323.01.T01:intron | 40.0% |
| !! | ATACGAGTGTTGGAAGGTTA+AGG | + | Chr5:3394696-3394715 | MsG0580024323.01.T01:CDS | 40.0% |
| !! | TCACTTTTCGCAAAGCAAAC+CGG | - | Chr5:3395441-3395460 | None:intergenic | 40.0% |
| !! | TGTCCTATTCAAGTTGCACT+TGG | + | Chr5:3396591-3396610 | MsG0580024323.01.T01:intron | 40.0% |
| !! | TGTGTGTTTGGATTGGTGTT+GGG | + | Chr5:3395704-3395723 | MsG0580024323.01.T01:intron | 40.0% |
| !! | TTGTGTGTTTGGATTGGTGT+TGG | + | Chr5:3395703-3395722 | MsG0580024323.01.T01:intron | 40.0% |
| !!! | GTTCTGGTTTTCCAAATCTC+TGG | + | Chr5:3398552-3398571 | MsG0580024323.01.T01:intron | 40.0% |
| AATGTCACCGAAGATGGATC+AGG | + | Chr5:3399073-3399092 | MsG0580024323.01.T01:CDS | 45.0% | |
| ACACACATAGATGTGCCTGT+TGG | + | Chr5:3395415-3395434 | MsG0580024323.01.T01:intron | 45.0% | |
| ACAGGAAGGACACCCATTTA+GGG | - | Chr5:3398723-3398742 | None:intergenic | 45.0% | |
| ACAGTTGTGGCAATTGAAGG+AGG | + | Chr5:3398959-3398978 | MsG0580024323.01.T01:CDS | 45.0% | |
| ACCACCTTCAGAAGCTAAAC+CGG | - | Chr5:3394756-3394775 | None:intergenic | 45.0% | |
| ACTATTGCAGCAACAGTGTC+TGG | - | Chr5:3397282-3397301 | None:intergenic | 45.0% | |
| AGATGTTGCAGCATGTTTGC+AGG | + | Chr5:3396674-3396693 | MsG0580024323.01.T01:CDS | 45.0% | |
| AGGTGAATCATCCTCATGCA+TGG | - | Chr5:3398628-3398647 | None:intergenic | 45.0% | |
| ATAAGGACACACCTAATCCG+AGG | - | Chr5:3395486-3395505 | None:intergenic | 45.0% | |
| ATCAATTCGCTCCAAGTAGC+AGG | - | Chr5:3397325-3397344 | None:intergenic | 45.0% | |
| ATTCCCCCACATCTAATGAC+TGG | + | Chr5:3396193-3396212 | MsG0580024323.01.T01:CDS | 45.0% | |
| CAGCTAGAACCAACAATGCA+TGG | - | Chr5:3395823-3395842 | None:intergenic | 45.0% | |
| CAGGGTCTTCTTACAACATC+AGG | + | Chr5:3397360-3397379 | MsG0580024323.01.T01:CDS | 45.0% | |
| CATGTCACCTCAAATACTCC+AGG | - | Chr5:3398460-3398479 | None:intergenic | 45.0% | |
| CCAAGATGCAGCGCATAATA+TGG | - | Chr5:3396091-3396110 | None:intergenic | 45.0% | |
| CCAATACTTCACAGGACAGA+AGG | + | Chr5:3396387-3396406 | MsG0580024323.01.T01:CDS | 45.0% | |
| CCACTTGATTAAAATGCCCG+AGG | - | Chr5:3396459-3396478 | None:intergenic | 45.0% | |
| CCATATTATGCGCTGCATCT+TGG | + | Chr5:3396088-3396107 | MsG0580024323.01.T01:CDS | 45.0% | |
| CCTTCTGTCCTGTGAAGTAT+TGG | - | Chr5:3396390-3396409 | None:intergenic | 45.0% | |
| CTCTACTTCATGCTCAAGGA+CGG | - | Chr5:3396164-3396183 | None:intergenic | 45.0% | |
| CTTGCCTTCAATGGAAGATC+TGG | - | Chr5:3398788-3398807 | None:intergenic | 45.0% | |
| CTTGTGCCAGTCATTAGATG+TGG | - | Chr5:3396202-3396221 | None:intergenic | 45.0% | |
| GAAGGTTGTGATACGAGTGT+TGG | + | Chr5:3394686-3394705 | MsG0580024323.01.T01:CDS | 45.0% | |
| GCACATATACTCCTCGGATT+AGG | + | Chr5:3395472-3395491 | MsG0580024323.01.T01:intron | 45.0% | |
| GCTCCGTGAAAATGATGCAT+AGG | + | Chr5:3398481-3398500 | MsG0580024323.01.T01:intron | 45.0% | |
| GCTGCAATAGTCATTGGTAC+TGG | + | Chr5:3397291-3397310 | MsG0580024323.01.T01:CDS | 45.0% | |
| GGTACAAACCTCAGTACGAA+CGG | - | Chr5:3397766-3397785 | None:intergenic | 45.0% | |
| GGTTGGCATTTAACACGCTA+AGG | + | Chr5:3395389-3395408 | MsG0580024323.01.T01:intron | 45.0% | |
| GTAACGCGGGTTCATTTAAG+TGG | + | Chr5:3396127-3396146 | MsG0580024323.01.T01:CDS | 45.0% | |
| GTCATTAGATGTGGGGGAAT+AGG | - | Chr5:3396193-3396212 | None:intergenic | 45.0% | |
| TACAGGAAGGACACCCATTT+AGG | - | Chr5:3398724-3398743 | None:intergenic | 45.0% | |
| TATTATGCGCTGCATCTTGG+GGG | + | Chr5:3396091-3396110 | MsG0580024323.01.T01:CDS | 45.0% | |
| TCTAATGACTGGCACAAGCA+AGG | + | Chr5:3396204-3396223 | MsG0580024323.01.T01:CDS | 45.0% | |
| TCTACTTCATGCTCAAGGAC+GGG | - | Chr5:3396163-3396182 | None:intergenic | 45.0% | |
| TCTCAGGATGTCACTAGAGT+CGG | + | Chr5:3397705-3397724 | MsG0580024323.01.T01:CDS | 45.0% | |
| TCTTACAACATCAGGACGCA+TGG | + | Chr5:3397368-3397387 | MsG0580024323.01.T01:CDS | 45.0% | |
| TGAACTGACACAGTGACACA+TGG | - | Chr5:3395344-3395363 | None:intergenic | 45.0% | |
| TGGTACTAATGCCTGCTACT+TGG | + | Chr5:3397311-3397330 | MsG0580024323.01.T01:CDS | 45.0% | |
| TGTGCCAGTCATTAGATGTG+GGG | - | Chr5:3396200-3396219 | None:intergenic | 45.0% | |
| TGTTGGAAGGTTAAGGCAAG+TGG | + | Chr5:3394703-3394722 | MsG0580024323.01.T01:CDS | 45.0% | |
| TTAGCAGCTGCTGGTATTGT+TGG | + | Chr5:3398857-3398876 | MsG0580024323.01.T01:CDS | 45.0% | |
| ! | AACTTTGGTGATTTGGGTGC+AGG | + | Chr5:3397627-3397646 | MsG0580024323.01.T01:intron | 45.0% |
| ! | AAGGCAAGCATTGCTTTCAG+AGG | - | Chr5:3396807-3396826 | None:intergenic | 45.0% |
| ! | AAGGCAAGTGGTTGATGCTA+TGG | + | Chr5:3394715-3394734 | MsG0580024323.01.T01:CDS | 45.0% |
| ! | ACTTTGGTGATTTGGGTGCA+GGG | + | Chr5:3397628-3397647 | MsG0580024323.01.T01:intron | 45.0% |
| ! | AGGCAAGCATTGCTTTCAGA+GGG | - | Chr5:3396806-3396825 | None:intergenic | 45.0% |
| ! | TGAAGAAGATTGGTCGTGAC+GGG | + | Chr5:3398885-3398904 | MsG0580024323.01.T01:CDS | 45.0% |
| ! | TGTTGTGAAGGTGTGTGATG+TGG | + | Chr5:3398814-3398833 | MsG0580024323.01.T01:CDS | 45.0% |
| !! | CAGGAAGCATTTGCACGAAA+TGG | + | Chr5:3396693-3396712 | MsG0580024323.01.T01:CDS | 45.0% |
| !! | CCTCGGGCATTTTAATCAAG+TGG | + | Chr5:3396456-3396475 | MsG0580024323.01.T01:CDS | 45.0% |
| !! | GCTTTCTGGAGTACCATGTT+AGG | + | Chr5:3395083-3395102 | MsG0580024323.01.T01:intron | 45.0% |
| !! | GTTGTGATACGAGTGTTGGA+AGG | + | Chr5:3394690-3394709 | MsG0580024323.01.T01:CDS | 45.0% |
| !! | TACCTCAAAGGTGTCGTTGA+GGG | - | Chr5:3398673-3398692 | None:intergenic | 45.0% |
| !! | TTACCTCAAAGGTGTCGTTG+AGG | - | Chr5:3398674-3398693 | None:intergenic | 45.0% |
| !!! | GTTTGGATTGGTTTTGGGAG+AGG | + | Chr5:3395318-3395337 | MsG0580024323.01.T01:intron | 45.0% |
| !! | ATAAAAATTAGAAATTTAAA+CGG | - | Chr5:3395035-3395054 | None:intergenic | 5.0% |
| !!! | TTTTATTTAAATTTTGTTTA+TGG | + | Chr5:3395170-3395189 | MsG0580024323.01.T01:intron | 5.0% |
| AACCCTCAACGACACCTTTG+AGG | + | Chr5:3398668-3398687 | MsG0580024323.01.T01:CDS | 50.0% | |
| AATCAAGAAGGTTCACCCGG+TGG | + | Chr5:3395886-3395905 | MsG0580024323.01.T01:intron | 50.0% | |
| ACATAGATGTGCCTGTTGGC+CGG | + | Chr5:3395419-3395438 | MsG0580024323.01.T01:intron | 50.0% | |
| ACCGAAGATGGATCAGGCAT+TGG | + | Chr5:3399079-3399098 | MsG0580024323.01.T01:CDS | 50.0% | |
| ACCGGGTGAACCTTCTTGAT+TGG | - | Chr5:3395887-3395906 | None:intergenic | 50.0% | |
| AGATGTGCATGTAGCTGCCT+TGG | + | Chr5:3396719-3396738 | MsG0580024323.01.T01:CDS | 50.0% | |
| AGGCAGCTACATGCACATCT+AGG | - | Chr5:3396719-3396738 | None:intergenic | 50.0% | |
| ATGAAGCATGGACTCAGACG+CGG | - | Chr5:3395618-3395637 | None:intergenic | 50.0% | |
| CACGACACGTATCCGACATA+AGG | - | Chr5:3395503-3395522 | None:intergenic | 50.0% | |
| CCCAATGCCTGATCCATCTT+CGG | - | Chr5:3399083-3399102 | None:intergenic | 50.0% | |
| CCGAAGATGGATCAGGCATT+GGG | + | Chr5:3399080-3399099 | MsG0580024323.01.T01:CDS | 50.0% | |
| CGTCTGAGTCCATGCTTCAT+AGG | + | Chr5:3395618-3395637 | MsG0580024323.01.T01:intron | 50.0% | |
| GCCAATCAAGAAGGTTCACC+CGG | + | Chr5:3395883-3395902 | MsG0580024323.01.T01:intron | 50.0% | |
| GGATGGGATTTAACGCGCTA+CGG | + | Chr5:3395779-3395798 | MsG0580024323.01.T01:intron | 50.0% | |
| GTCGCTCTACTTCATGCTCA+AGG | - | Chr5:3396168-3396187 | None:intergenic | 50.0% | |
| GTGCCAGTCATTAGATGTGG+GGG | - | Chr5:3396199-3396218 | None:intergenic | 50.0% | |
| GTGTGATGTGGTGACTCGTA+GGG | + | Chr5:3398826-3398845 | MsG0580024323.01.T01:CDS | 50.0% | |
| TCACAGGACAGAAGGGAACT+TGG | + | Chr5:3396395-3396414 | MsG0580024323.01.T01:CDS | 50.0% | |
| TCATGCATGGCAGCCATCAA+AGG | - | Chr5:3398615-3398634 | None:intergenic | 50.0% | |
| TCGTGAGGAGAGTCATTCTC+AGG | + | Chr5:3397689-3397708 | MsG0580024323.01.T01:CDS | 50.0% | |
| TGCATGTAGCTGCCTTGGTA+AGG | + | Chr5:3396724-3396743 | MsG0580024323.01.T01:intron | 50.0% | |
| TGTATCTCGGTGACATCGTG+AGG | + | Chr5:3397674-3397693 | MsG0580024323.01.T01:CDS | 50.0% | |
| TGTGTGATGTGGTGACTCGT+AGG | + | Chr5:3398825-3398844 | MsG0580024323.01.T01:CDS | 50.0% | |
| TTTCAACGCCGTTCGTACTG+AGG | + | Chr5:3397755-3397774 | MsG0580024323.01.T01:CDS | 50.0% | |
| ! | CGAAGATGGATCAGGCATTG+GGG | + | Chr5:3399081-3399100 | MsG0580024323.01.T01:CDS | 50.0% |
| ! | GCAAGTGGTTGATGCTATGG+CGG | + | Chr5:3394718-3394737 | MsG0580024323.01.T01:CDS | 50.0% |
| ! | TTTGATGGCTGCCATGCATG+AGG | + | Chr5:3398614-3398633 | MsG0580024323.01.T01:CDS | 50.0% |
| !! | AAGAGTGGTAGTGGGAGTGA+CGG | + | Chr5:3394556-3394575 | MsG0580024323.01.T01:CDS | 50.0% |
| ACAATGCATGGCGCGTCTGT+TGG | - | Chr5:3395811-3395830 | None:intergenic | 55.0% | |
| ACAGACGCGCCATGCATTGT+TGG | + | Chr5:3395811-3395830 | MsG0580024323.01.T01:intron | 55.0% | |
| TCATGCTCAAGGACGGGAGA+TGG | - | Chr5:3396157-3396176 | None:intergenic | 55.0% | |
| TGTCGGATACGTGTCGTGTC+CGG | + | Chr5:3395505-3395524 | MsG0580024323.01.T01:intron | 55.0% | |
| ! | AAGATTGGTCGTGACGGGAG+TGG | + | Chr5:3398890-3398909 | MsG0580024323.01.T01:CDS | 55.0% |
| ! | AGTGGTTGATGCTATGGCGG+TGG | + | Chr5:3394721-3394740 | MsG0580024323.01.T01:CDS | 55.0% |
| ! | GCCGGTTTAGCTTCTGAAGG+TGG | + | Chr5:3394752-3394771 | MsG0580024323.01.T01:CDS | 55.0% |
| !! | CACGCCGGTTTAGCTTCTGA+AGG | + | Chr5:3394749-3394768 | MsG0580024323.01.T01:CDS | 55.0% |
| !! | TCGGTGTCATGTCGTGTTGC+CGG | - | Chr5:3395527-3395546 | None:intergenic | 55.0% |
| CGCAAAGCAAACCGGCCAAC+AGG | - | Chr5:3395433-3395452 | None:intergenic | 60.0% | |
| GCATCACAGGTGGACGGAGT+AGG | + | Chr5:3398915-3398934 | MsG0580024323.01.T01:CDS | 60.0% | |
| GCTGCTCGATTAGCAGCTGC+TGG | + | Chr5:3398848-3398867 | MsG0580024323.01.T01:CDS | 60.0% | |
| GTGGTGGCATCACAGGTGGA+CGG | + | Chr5:3398909-3398928 | MsG0580024323.01.T01:CDS | 60.0% | |
| ! | ATTGGTCGTGACGGGAGTGG+TGG | + | Chr5:3398893-3398912 | MsG0580024323.01.T01:CDS | 60.0% |
| ATGGCGGTGGAGATGCACGC+CGG | + | Chr5:3394734-3394753 | MsG0580024323.01.T01:CDS | 65.0% | |
| GACGGGAGTGGTGGCATCAC+AGG | + | Chr5:3398902-3398921 | MsG0580024323.01.T01:CDS | 65.0% | |
| GGGAGTGGTGGCATCACAGG+TGG | + | Chr5:3398905-3398924 | MsG0580024323.01.T01:CDS | 65.0% | |
| !! | GGTAGTGGGAGTGACGGCGA+CGG | + | Chr5:3394562-3394581 | MsG0580024323.01.T01:CDS | 65.0% |
| AGTGGGAGTGACGGCGACGG+TGG | + | Chr5:3394565-3394584 | MsG0580024323.01.T01:CDS | 70.0% | |
| GGGAGTGACGGCGACGGTGG+CGG | + | Chr5:3394568-3394587 | MsG0580024323.01.T01:CDS | 75.0% | |
| ! | AGTGACGGCGACGGTGGCGG+TGG | + | Chr5:3394571-3394590 | MsG0580024323.01.T01:CDS | 75.0% |
| !! | GACGGCGACGGTGGCGGTGG+CGG | + | Chr5:3394574-3394593 | MsG0580024323.01.T01:CDS | 80.0% |
| !! | GGTGGCGGCGTGTGCGGTGG+CGG | + | Chr5:3394589-3394608 | MsG0580024323.01.T01:CDS | 80.0% |
| !! | GGTGGCGGTGGCGGCGTGTG+CGG | + | Chr5:3394583-3394602 | MsG0580024323.01.T01:CDS | 80.0% |
| !! | GGCGGCGTGTGCGGTGGCGG+CGG | + | Chr5:3394592-3394611 | MsG0580024323.01.T01:CDS | 85.0% |
| !! | GGCGGTGGCGGCGTGTGCGG+TGG | + | Chr5:3394586-3394605 | MsG0580024323.01.T01:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 3394551 | 3399506 | 3394551 | ID=MsG0580024323.01;Name=MsG0580024323.01 |
| Chr5 | mRNA | 3394551 | 3399506 | 3394551 | ID=MsG0580024323.01.T01;Parent=MsG0580024323.01;Name=MsG0580024323.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.5|0.44|1|1|1|9|374|496 |
| Chr5 | exon | 3394551 | 3394822 | 3394551 | ID=MsG0580024323.01.T01:exon:2005;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3396075 | 3396225 | 3396075 | ID=MsG0580024323.01.T01:exon:2006;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3396329 | 3396505 | 3396329 | ID=MsG0580024323.01.T01:exon:2007;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3396666 | 3396740 | 3396666 | ID=MsG0580024323.01.T01:exon:2008;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3397234 | 3397389 | 3397234 | ID=MsG0580024323.01.T01:exon:2009;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3397472 | 3397570 | 3397472 | ID=MsG0580024323.01.T01:exon:2010;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3397649 | 3397776 | 3397649 | ID=MsG0580024323.01.T01:exon:2011;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3398608 | 3398689 | 3398608 | ID=MsG0580024323.01.T01:exon:2012;Parent=MsG0580024323.01.T01 |
| Chr5 | exon | 3398782 | 3399506 | 3398782 | ID=MsG0580024323.01.T01:exon:2013;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3394551 | 3394822 | 3394551 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3396075 | 3396225 | 3396075 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3396329 | 3396505 | 3396329 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3396666 | 3396740 | 3396666 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3397234 | 3397389 | 3397234 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3397472 | 3397570 | 3397472 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3397649 | 3397776 | 3397649 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3398608 | 3398689 | 3398608 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | CDS | 3398782 | 3399132 | 3398782 | ID=MsG0580024323.01.T01:cds;Parent=MsG0580024323.01.T01 |
| Chr5 | three_prime_UTR | 3399133 | 3399506 | 3399133 | ID=MsG0580024323.01.T01:three_prime_utr;Parent=MsG0580024323.01.T01 |
| Gene Sequence |
| Protein sequence |
