AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040008.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040008.01.T01 MTR_7g083540 97.436 390 10 0 1 390 1 390 0.0 794
MsG0780040008.01.T01 MTR_7g108150 47.445 137 54 4 4 129 19 148 9.71e-31 121
MsG0780040008.01.T01 MTR_7g108150 55.556 63 26 1 322 382 307 369 1.07e-13 72.4
MsG0780040008.01.T01 MTR_5g069480 43.396 106 54 2 5 110 5 104 1.21e-23 100
MsG0780040008.01.T01 MTR_5g069480 42.727 110 57 2 1 110 1 104 1.70e-23 101
MsG0780040008.01.T01 MTR_3g082630 39.568 139 76 3 1 138 1 132 3.42e-23 100
MsG0780040008.01.T01 MTR_3g082630 56.061 66 29 0 318 383 331 396 1.53e-14 75.1
MsG0780040008.01.T01 MTR_2g088900 43.119 109 52 2 1 108 97 196 2.18e-19 90.1
MsG0780040008.01.T01 MTR_2g088900 26.065 399 251 12 2 385 141 510 4.95e-15 77.0
MsG0780040008.01.T01 MTR_1g109350 34.188 117 68 2 1 117 1 108 3.00e-17 82.4
MsG0780040008.01.T01 MTR_1g013450 37.113 97 55 1 5 95 6 102 6.58e-15 75.5
MsG0780040008.01.T01 MTR_3g105710 42.667 75 43 0 5 79 6 80 3.06e-13 70.1
MsG0780040008.01.T01 MTR_4g128930 37.634 93 52 2 5 97 22 108 5.13e-12 67.0
MsG0780040008.01.T01 MTR_4g128930 36.559 93 54 1 293 385 255 342 1.40e-11 65.9
MsG0780040008.01.T01 MTR_7g018170 32.990 97 59 2 5 101 26 116 6.66e-11 63.9
MsG0780040008.01.T01 MTR_7g018170 68.293 41 13 0 345 385 331 371 9.13e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040008.01.T01 AT2G33500 35.225 423 198 11 5 385 12 400 5.06e-64 210
MsG0780040008.01.T01 AT2G33500 36.298 416 204 11 5 385 12 401 6.85e-64 210
MsG0780040008.01.T01 AT1G28050 53.509 114 47 1 4 117 8 115 1.22e-36 138
MsG0780040008.01.T01 AT1G28050 39.785 186 87 6 215 385 254 429 4.37e-22 97.8
MsG0780040008.01.T01 AT2G47890 48.361 122 55 2 5 126 13 126 9.11e-29 114
MsG0780040008.01.T01 AT2G47890 48.361 122 55 2 5 126 13 126 1.01e-28 112
MsG0780040008.01.T01 AT2G47890 48.361 122 55 2 5 126 13 126 1.05e-28 114
MsG0780040008.01.T01 AT2G47890 62.745 51 19 0 335 385 281 331 1.90e-13 71.2
MsG0780040008.01.T01 AT5G48250 41.322 121 67 1 1 121 1 117 2.27e-25 106
MsG0780040008.01.T01 AT5G48250 61.224 49 19 0 337 385 312 360 6.83e-13 69.7
MsG0780040008.01.T01 AT3G07650 39.669 121 68 2 1 116 1 121 3.54e-22 97.4
MsG0780040008.01.T01 AT3G07650 65.306 49 17 0 337 385 311 359 3.06e-14 73.9
MsG0780040008.01.T01 AT3G07650 39.669 121 68 2 1 116 1 121 3.54e-22 97.4
MsG0780040008.01.T01 AT3G07650 65.306 49 17 0 337 385 311 359 3.06e-14 73.9
MsG0780040008.01.T01 AT3G07650 39.669 121 68 2 1 116 1 121 3.54e-22 97.4
MsG0780040008.01.T01 AT3G07650 65.306 49 17 0 337 385 311 359 3.06e-14 73.9
MsG0780040008.01.T01 AT3G07650 39.669 121 68 2 1 116 1 121 3.54e-22 97.4
MsG0780040008.01.T01 AT3G07650 65.306 49 17 0 337 385 311 359 3.06e-14 73.9
MsG0780040008.01.T01 AT1G68190 35.135 148 86 3 5 150 14 153 1.38e-21 95.5
MsG0780040008.01.T01 AT1G68190 35.135 148 86 3 5 150 14 153 1.38e-21 95.5
MsG0780040008.01.T01 AT1G68190 35.135 148 86 3 5 150 43 182 1.39e-21 95.9
MsG0780040008.01.T01 AT3G21880 36.800 125 71 1 5 129 5 121 3.55e-20 91.3
MsG0780040008.01.T01 AT3G21880 75.556 45 11 0 341 385 307 351 2.26e-13 71.2
MsG0780040008.01.T01 AT3G21880 36.800 125 71 1 5 129 9 125 3.55e-20 91.7
MsG0780040008.01.T01 AT3G21880 75.556 45 11 0 341 385 311 355 2.29e-13 71.2
MsG0780040008.01.T01 AT3G21880 36.800 125 71 1 5 129 9 125 3.55e-20 91.7
MsG0780040008.01.T01 AT3G21880 75.556 45 11 0 341 385 311 355 2.29e-13 71.2
MsG0780040008.01.T01 AT4G15250 34.146 123 73 1 5 127 5 119 9.85e-19 86.7
MsG0780040008.01.T01 AT5G24930 44.444 72 40 0 5 76 6 77 2.55e-14 73.9
MsG0780040008.01.T01 AT5G15840 35.714 98 57 2 4 101 19 110 9.31e-13 69.3
MsG0780040008.01.T01 AT5G15840 38.158 76 47 0 4 79 19 94 3.06e-12 67.0
MsG0780040008.01.T01 AT3G02380 37.333 75 47 0 5 79 16 90 1.03e-11 66.2
MsG0780040008.01.T01 AT5G15850 38.667 75 46 0 5 79 12 86 1.62e-11 65.5
MsG0780040008.01.T01 AT2G24790 38.272 81 47 1 5 85 8 85 4.27e-11 63.9
MsG0780040008.01.T01 AT2G24790 38.272 81 47 1 5 85 8 85 7.87e-11 62.0

Find 98 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACACATCTTGCAATGATTT+TGG 0.117879 7:+71898919 None:intergenic
TGCGAAGAGGAAGAGGAATT+TGG 0.187240 7:-71900703 MsG0780040008.01.T01:CDS
TGTTATGGATTCAATCAATT+TGG 0.190330 7:+71897693 None:intergenic
ATGAATCTGGTCTTCTTCTT+TGG 0.202244 7:-71900533 MsG0780040008.01.T01:CDS
TTATTGATTTGATTCTTTCT+TGG 0.276885 7:-71897076 MsG0780040008.01.T01:three_prime_UTR
AAGAGAAATAGTAATGATTA+TGG 0.284505 7:-71900558 MsG0780040008.01.T01:CDS
TGAATCTGGTCTTCTTCTTT+GGG 0.293542 7:-71900532 MsG0780040008.01.T01:CDS
CACGAGATCGTTTCTACTTT+GGG 0.309004 7:-71900831 MsG0780040008.01.T01:CDS
TGCCATGGGATGAGGTTTCT+TGG 0.322653 7:+71897192 None:intergenic
ATTTGAAGGTCCGGTGGTTC+CGG 0.352451 7:-71900769 MsG0780040008.01.T01:CDS
CTCAAAAGATGTTCCATAAC+TGG 0.354580 7:+71897649 None:intergenic
TTCAAATTCCGCTACGAAAA+CGG 0.368362 7:+71900785 None:intergenic
CTTCTATACGGCGGCGGTTG+TGG 0.371891 7:+71900877 None:intergenic
TATATCAGAGAAATATTAAC+AGG 0.383723 7:-71897134 MsG0780040008.01.T01:three_prime_UTR
GCAAAATTTGCAGAATCAAT+CGG 0.389145 7:-71897791 MsG0780040008.01.T01:intron
GTGCTCTTCCAAGCCAATCT+TGG 0.393330 7:+71897597 None:intergenic
CGCCGACAGTGTACCAGTTA+TGG 0.397943 7:-71897662 MsG0780040008.01.T01:CDS
AAACAGAGTTTCGCGGAGTC+TGG 0.399009 7:+71901092 None:intergenic
AATGATTATGGAAATGAATC+TGG 0.399310 7:-71900546 MsG0780040008.01.T01:CDS
AATATGAATTGCTCAACATT+TGG 0.400714 7:-71898895 MsG0780040008.01.T01:CDS
AGCAACATAAATGCCAAGAT+TGG 0.407616 7:-71897610 MsG0780040008.01.T01:CDS
AGTGAGAGGGCGATTTGTTA+AGG 0.417847 7:-71897248 MsG0780040008.01.T01:CDS
TACGGCGGCGGTTGTGGTGG+TGG 0.418409 7:+71900883 None:intergenic
TGGTTCCGGTTGTGAAGAAT+AGG 0.424178 7:-71900755 MsG0780040008.01.T01:CDS
TCACGAGATCGTTTCTACTT+TGG 0.428133 7:-71900832 MsG0780040008.01.T01:CDS
CTCGTGAACGGAAGGACAAC+CGG 0.438426 7:+71900848 None:intergenic
CACAACCGCCGCCGTATAGA+AGG 0.439408 7:-71900876 MsG0780040008.01.T01:CDS
GCTACGAAAACGGAGTCATT+CGG 0.440696 7:+71900795 None:intergenic
TAGGGATGAGGTGTATGAAC+AGG 0.447620 7:-71900736 MsG0780040008.01.T01:CDS
GTCGGCGCCACTGTATGTTA+TGG 0.448248 7:+71897678 None:intergenic
TTCAATGTCACCGCTGCGAT+TGG 0.452188 7:-71900950 MsG0780040008.01.T01:CDS
CGTAGCGGAATTTGAAGGTC+CGG 0.462252 7:-71900778 MsG0780040008.01.T01:CDS
TGGAAGTTGCGAAGAGGAAG+AGG 0.466657 7:-71900710 MsG0780040008.01.T01:CDS
AACCGGTGAGACCTTCTATA+CGG 0.471948 7:+71900865 None:intergenic
TACTTTGGTTGTAAGAAAGA+AGG 0.473670 7:+71901182 None:intergenic
CTTGAGTGCGAGTGCGTTTG+CGG 0.474133 7:+71901046 None:intergenic
TCATCCCTATTCTTCACAAC+CGG 0.475665 7:+71900750 None:intergenic
GAAGAGCACACAAGGAATAG+AGG 0.476262 7:-71897583 MsG0780040008.01.T01:CDS
ACCTGGGGAGGCTGATACGT+GGG 0.477722 7:+71900501 None:intergenic
CGCAGCGGTGACATTGAACT+AGG 0.479363 7:+71900955 None:intergenic
CTTCTCCTTGTACCGTAACA+TGG 0.495549 7:+71897555 None:intergenic
GGATGCCATGTTACGGTACA+AGG 0.500503 7:-71897560 MsG0780040008.01.T01:CDS
AAATTAAGCAAAGAAGTAAA+CGG 0.500811 7:+71900606 None:intergenic
TTCTTCACAACCGGAACCAC+CGG 0.501470 7:+71900759 None:intergenic
AAGGGAAATGCCATGGGATG+AGG 0.502225 7:+71897184 None:intergenic
TGAGGTGTATGAACAGGTGG+TGG 0.504109 7:-71900730 MsG0780040008.01.T01:CDS
AGCAACAAGAAAACTAGAGA+TGG 0.509293 7:-71897730 MsG0780040008.01.T01:CDS
TCAAGAGATATGACATATGA+TGG 0.511657 7:-71898967 MsG0780040008.01.T01:CDS
AGCACATTCGCTATGAATCA+AGG 0.520514 7:-71897297 MsG0780040008.01.T01:CDS
GAAGAGGAAGAGGAATTTGG+AGG 0.524479 7:-71900700 MsG0780040008.01.T01:CDS
TTTCTACTTTCTTCTTCACA+TGG 0.524678 7:+71897752 None:intergenic
GGTTCCGGTTGTGAAGAATA+GGG 0.535707 7:-71900754 MsG0780040008.01.T01:CDS
CATAAATGCCAAGATTGGCT+TGG 0.540383 7:-71897605 MsG0780040008.01.T01:CDS
CTATACGGCGGCGGTTGTGG+TGG 0.541136 7:+71900880 None:intergenic
GCTATGAATCAAGGAAGGCT+AGG 0.543852 7:-71897288 MsG0780040008.01.T01:CDS
CACATACAAGGGAAATGCCA+TGG 0.545322 7:+71897177 None:intergenic
ATGGGATGAGGTTTCTTGGA+AGG 0.548582 7:+71897196 None:intergenic
ATAGAGGGGATGCCATGTTA+CGG 0.554868 7:-71897567 MsG0780040008.01.T01:CDS
TGGTGGAAAGATGAAGAGGT+GGG 0.564898 7:+71900900 None:intergenic
GAAACGATCTCGTGAACGGA+AGG 0.565871 7:+71900840 None:intergenic
GATACGAGAAAGAGAGTGAG+AGG 0.573604 7:-71897262 MsG0780040008.01.T01:CDS
CTATGAATCAAGGAAGGCTA+GGG 0.574333 7:-71897287 MsG0780040008.01.T01:CDS
AAGAGCACACAAGGAATAGA+GGG 0.577298 7:-71897582 MsG0780040008.01.T01:CDS
GCAACAAGAAAACTAGAGAT+GGG 0.580033 7:-71897729 MsG0780040008.01.T01:CDS
GCAACTGATGATATTCAAGA+AGG 0.580530 7:-71897226 MsG0780040008.01.T01:CDS
ATTATATGTATACACATACA+AGG 0.581845 7:+71897165 None:intergenic
AGTAGAAACGATCTCGTGAA+CGG 0.584234 7:+71900836 None:intergenic
CGTTTGCGGAGTGCACGTGC+TGG 0.587965 7:+71901060 None:intergenic
TTCCAAGAAACCTCATCCCA+TGG 0.592114 7:-71897194 MsG0780040008.01.T01:three_prime_UTR
TTGGCTTGGAAGAGCACACA+AGG 0.593037 7:-71897591 MsG0780040008.01.T01:CDS
GGATGAGGTGTATGAACAGG+TGG 0.594648 7:-71900733 MsG0780040008.01.T01:CDS
GTGGTGGAAAGATGAAGAGG+TGG 0.596821 7:+71900899 None:intergenic
TTCCATAACTGGTACACTGT+CGG 0.600741 7:+71897660 None:intergenic
GTGGTGGTGGAAAGATGAAG+AGG 0.606309 7:+71900896 None:intergenic
GGTTGTGAAGAATAGGGATG+AGG 0.611431 7:-71900748 MsG0780040008.01.T01:CDS
ACAAATTAACAAACCTGGGG+AGG 0.611687 7:+71900489 None:intergenic
TCCCACGTATCAGCCTCCCC+AGG 0.613709 7:-71900502 MsG0780040008.01.T01:intron
AGCGGAATTTGAAGGTCCGG+TGG 0.616808 7:-71900775 MsG0780040008.01.T01:CDS
CGCCGTATAGAAGGTCTCAC+CGG 0.625403 7:-71900867 MsG0780040008.01.T01:CDS
CTTGTGTCGCAATAGTCACA+CGG 0.626589 7:+71901137 None:intergenic
TGAGACCTTCTATACGGCGG+CGG 0.629918 7:+71900871 None:intergenic
CGCTGCGATTGGAACTCTCA+CGG 0.637906 7:-71900939 MsG0780040008.01.T01:CDS
ACATACAAGGGAAATGCCAT+GGG 0.639407 7:+71897178 None:intergenic
ATTGAATCCATAACATACAG+TGG 0.640281 7:-71897685 MsG0780040008.01.T01:CDS
GCAAACTAAACAGAGTTTCG+CGG 0.640738 7:+71901085 None:intergenic
AACCTGGGGAGGCTGATACG+TGG 0.646766 7:+71900500 None:intergenic
CATTCGCTATGAATCAAGGA+AGG 0.651760 7:-71897293 MsG0780040008.01.T01:CDS
AGATATGACATATGATGGTG+TGG 0.652581 7:-71898962 MsG0780040008.01.T01:CDS
GGTGAAGCAACGAACTGAAG+CGG 0.659811 7:+71900983 None:intergenic
ATACGAGAAAGAGAGTGAGA+GGG 0.660678 7:-71897261 MsG0780040008.01.T01:CDS
GGTGGAAAGATGAAGAGGTG+GGG 0.660716 7:+71900901 None:intergenic
AGGTGGTGGAAGTTGCGAAG+AGG 0.669173 7:-71900716 MsG0780040008.01.T01:CDS
TTATATGTATACACATACAA+GGG 0.669811 7:+71897166 None:intergenic
AGGAGAAGAAGAAAACTCGA+AGG 0.686541 7:-71897540 MsG0780040008.01.T01:intron
AGAGCACACAAGGAATAGAG+GGG 0.718530 7:-71897581 MsG0780040008.01.T01:CDS
CGGTGAGACCTTCTATACGG+CGG 0.729242 7:+71900868 None:intergenic
CGTGAGAGTTCCAATCGCAG+CGG 0.733388 7:+71900940 None:intergenic
TGCGATTGGAACTCTCACGG+CGG 0.780073 7:-71900936 MsG0780040008.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG + Chr7:71900062-71900081 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + Chr7:71900063-71900082 None:intergenic 10.0%
!!! AAAAAAAACATTTTTTTTGA+GGG + Chr7:71897963-71897982 None:intergenic 10.0%
!!! TAAAAAAAACATTTTTTTTG+AGG + Chr7:71897964-71897983 None:intergenic 10.0%
!!! TATTTTTTATTTTTTGTAGT+TGG + Chr7:71900900-71900919 None:intergenic 10.0%
!!! TTAAGATTGTTAATTTTAAT+TGG - Chr7:71898905-71898924 MsG0780040008.01.T01:CDS 10.0%
!! ATTTAGTGTTATATTGTATT+GGG + Chr7:71899998-71900017 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + Chr7:71899999-71900018 None:intergenic 15.0%
!!! ACTTTTTCTACATTATAAAT+TGG + Chr7:71899508-71899527 None:intergenic 15.0%
!!! ATAATAGTAGTTTTTTTTAG+AGG - Chr7:71897986-71898005 MsG0780040008.01.T01:intron 15.0%
!!! CATTAATTCAACTTTTAATA+TGG - Chr7:71899613-71899632 MsG0780040008.01.T01:intron 15.0%
!!! GAAAAAATAATCTCAAATTT+TGG - Chr7:71899554-71899573 MsG0780040008.01.T01:intron 15.0%
!!! GTTAATTTTAATTGGTTAAA+GGG - Chr7:71898913-71898932 MsG0780040008.01.T01:CDS 15.0%
!!! TGTATTATTATTTTCAACTT+GGG + Chr7:71900939-71900958 None:intergenic 15.0%
!!! TGTTAATTTTAATTGGTTAA+AGG - Chr7:71898912-71898931 MsG0780040008.01.T01:CDS 15.0%
!!! TTAAGTTGATTAATCTAAAA+AGG + Chr7:71897896-71897915 None:intergenic 15.0%
!! AAAAATTCAATGACCTTAAA+TGG + Chr7:71899217-71899236 None:intergenic 20.0%
!! AAACTAAAATCTACAAAGAA+TGG + Chr7:71899474-71899493 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + Chr7:71900039-71900058 None:intergenic 20.0%
!! AAAGTTTAATTGCATTAAGA+CGG - Chr7:71898179-71898198 MsG0780040008.01.T01:intron 20.0%
!! AAATTAAGCAAAGAAGTAAA+CGG + Chr7:71897713-71897732 None:intergenic 20.0%
!! AAGAGAAATAGTAATGATTA+TGG - Chr7:71897758-71897777 MsG0780040008.01.T01:CDS 20.0%
!! ATAATGAATTTGAGTAAACT+AGG - Chr7:71898636-71898655 MsG0780040008.01.T01:intron 20.0%
!! ATTATATGTATACACATACA+AGG + Chr7:71901154-71901173 None:intergenic 20.0%
!! GTTGAAAATAATAATACACT+TGG - Chr7:71900941-71900960 MsG0780040008.01.T01:CDS 20.0%
!! TATATCAGAGAAATATTAAC+AGG - Chr7:71901182-71901201 MsG0780040008.01.T01:five_prime_UTR 20.0%
!! TATGACAATGTAGTAAATAA+AGG + Chr7:71900445-71900464 None:intergenic 20.0%
!! TGCATTAATTGAGTTTATTA+CGG - Chr7:71899242-71899261 MsG0780040008.01.T01:intron 20.0%
!! TTAAGGAAATGTGATTTAAA+TGG - Chr7:71899778-71899797 MsG0780040008.01.T01:intron 20.0%
!! TTATATGTATACACATACAA+GGG + Chr7:71901153-71901172 None:intergenic 20.0%
!!! AAATATTTTACACATTCACA+AGG - Chr7:71898456-71898475 MsG0780040008.01.T01:intron 20.0%
!!! ATTACATTTTTAATGACTGA+TGG - Chr7:71898609-71898628 MsG0780040008.01.T01:intron 20.0%
!!! ATTTTCGTCTATCTAAAAAA+AGG - Chr7:71898323-71898342 MsG0780040008.01.T01:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG + Chr7:71899929-71899948 None:intergenic 20.0%
!!! GTATTATTATTTTCAACTTG+GGG + Chr7:71900938-71900957 None:intergenic 20.0%
!!! GTGTATTATTATTTTCAACT+TGG + Chr7:71900940-71900959 None:intergenic 20.0%
!!! TAATAGGCTTTTAATTTTAC+TGG - Chr7:71898771-71898790 MsG0780040008.01.T01:intron 20.0%
!!! TGAATTTTTCTCATTAGTTT+CGG - Chr7:71898796-71898815 MsG0780040008.01.T01:intron 20.0%
!!! TTACATTTTTAATGACTGAT+GGG - Chr7:71898610-71898629 MsG0780040008.01.T01:intron 20.0%
!!! TTATTGATTTGATTCTTTCT+TGG - Chr7:71901240-71901259 MsG0780040008.01.T01:five_prime_UTR 20.0%
! AAAACACAAATTAACAAACC+TGG + Chr7:71897835-71897854 None:intergenic 25.0%
! AAACACAAATTAACAAACCT+GGG + Chr7:71897834-71897853 None:intergenic 25.0%
! AATATGAATTGCTCAACATT+TGG - Chr7:71899421-71899440 MsG0780040008.01.T01:intron 25.0%
! AATGATTATGGAAATGAATC+TGG - Chr7:71897770-71897789 MsG0780040008.01.T01:CDS 25.0%
! ACTTATCCAAATTGAATGAT+TGG - Chr7:71900869-71900888 MsG0780040008.01.T01:CDS 25.0%
! ATACATACAGAAAAAACTGT+GGG - Chr7:71900255-71900274 MsG0780040008.01.T01:intron 25.0%
! ATGTATAAATAAAGGGAAAG+TGG + Chr7:71900055-71900074 None:intergenic 25.0%
! ATTGAATTGCAAACTGTTTA+AGG - Chr7:71899761-71899780 MsG0780040008.01.T01:intron 25.0%
! ATTTGGATAAGTAATCGTAT+AGG + Chr7:71900861-71900880 None:intergenic 25.0%
! CTTATCCAAATTGAATGATT+GGG - Chr7:71900870-71900889 MsG0780040008.01.T01:CDS 25.0%
! GAAAGTGGAATATATTGTAT+TGG + Chr7:71900040-71900059 None:intergenic 25.0%
! GAATGTGTAAAATATTTGAC+TGG + Chr7:71898453-71898472 None:intergenic 25.0%
! GGCAAAAATATTTCAAAAGA+AGG + Chr7:71899178-71899197 None:intergenic 25.0%
! TAAACTTTAACCACAATGAA+AGG + Chr7:71898167-71898186 None:intergenic 25.0%
! TAAATAAAGGCCAAATCATA+TGG + Chr7:71900432-71900451 None:intergenic 25.0%
! TATACATACAGAAAAAACTG+TGG - Chr7:71900254-71900273 MsG0780040008.01.T01:intron 25.0%
! TATTCATATTTATTGTCCCA+CGG - Chr7:71898534-71898553 MsG0780040008.01.T01:intron 25.0%
! TGTTATGGATTCAATCAATT+TGG + Chr7:71900626-71900645 None:intergenic 25.0%
! TTATCCAAATTGAATGATTG+GGG - Chr7:71900871-71900890 MsG0780040008.01.T01:CDS 25.0%
! TTCATTTGTATTTGCTTATG+AGG + Chr7:71900826-71900845 None:intergenic 25.0%
!! AACACACTTAACAATTTTTC+TGG - Chr7:71899590-71899609 MsG0780040008.01.T01:intron 25.0%
!! ATATTTCAAAAGAAGGTACA+AGG + Chr7:71899171-71899190 None:intergenic 25.0%
!! ATTTTGCAAAGACAAACAAT+TGG + Chr7:71900512-71900531 None:intergenic 25.0%
!! GAACTTTTACTCTTGTTAAT+AGG - Chr7:71898755-71898774 MsG0780040008.01.T01:intron 25.0%
!! TATTTCAAAAGAAGGTACAA+GGG + Chr7:71899170-71899189 None:intergenic 25.0%
!! TCAACTTTTAATATGGTACA+AGG - Chr7:71899620-71899639 MsG0780040008.01.T01:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + Chr7:71899952-71899971 None:intergenic 25.0%
!!! ACAGTTTTTTCTGTATGTAT+AGG + Chr7:71900255-71900274 None:intergenic 25.0%
!!! ATCGTTTTAAGAGAATACTT+TGG + Chr7:71897152-71897171 None:intergenic 25.0%
!!! GCAACTTTCTTTTTCAAAAT+TGG + Chr7:71900205-71900224 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + Chr7:71899951-71899970 None:intergenic 25.0%
!!! TTACTTATGTGCTTATTTTG+TGG - Chr7:71900971-71900990 MsG0780040008.01.T01:CDS 25.0%
AACACAAATTAACAAACCTG+GGG + Chr7:71897833-71897852 None:intergenic 30.0%
AAGGTTTAGTTACATTACCA+AGG - Chr7:71898342-71898361 MsG0780040008.01.T01:intron 30.0%
ACATTGAATCAAAGCAATGT+AGG + Chr7:71900281-71900300 None:intergenic 30.0%
AGAAAATAGGTCAGTTATTC+CGG + Chr7:71899916-71899935 None:intergenic 30.0%
AGGAAGATAAGTAGTTGAAA+AGG - Chr7:71898006-71898025 MsG0780040008.01.T01:intron 30.0%
ATCTCTGTGCTTAATGTATT+AGG - Chr7:71899670-71899689 MsG0780040008.01.T01:intron 30.0%
ATGCAAGATAACAACACATT+AGG + Chr7:71899011-71899030 None:intergenic 30.0%
ATGTGATTTAAATGGTTGAG+TGG - Chr7:71899786-71899805 MsG0780040008.01.T01:intron 30.0%
ATTGAATCCATAACATACAG+TGG - Chr7:71900631-71900650 MsG0780040008.01.T01:CDS 30.0%
CAAAGTAAGTCAATTAAACC+GGG - Chr7:71900098-71900117 MsG0780040008.01.T01:intron 30.0%
CCAAAGTAAGTCAATTAAAC+CGG - Chr7:71900097-71900116 MsG0780040008.01.T01:intron 30.0%
CTTTAATGTAAGGACTTTGA+TGG - Chr7:71899854-71899873 MsG0780040008.01.T01:intron 30.0%
GATTCAAGCTCTTTAATGTA+AGG - Chr7:71899844-71899863 MsG0780040008.01.T01:intron 30.0%
GCAAAATTTGCAGAATCAAT+CGG - Chr7:71900525-71900544 MsG0780040008.01.T01:CDS 30.0%
GGAAGATAAGTAGTTGAAAA+GGG - Chr7:71898007-71898026 MsG0780040008.01.T01:intron 30.0%
TAAAATCTCAGTTGAGATCT+TGG - Chr7:71899121-71899140 MsG0780040008.01.T01:intron 30.0%
TACTTTGGTTGTAAGAAAGA+AGG + Chr7:71897137-71897156 None:intergenic 30.0%
TATCCAAATTGAATGATTGG+GGG - Chr7:71900872-71900891 MsG0780040008.01.T01:CDS 30.0%
TCAAGAGATATGACATATGA+TGG - Chr7:71899349-71899368 MsG0780040008.01.T01:intron 30.0%
TCATGCTTGGTTTATCTATA+GGG - Chr7:71900473-71900492 MsG0780040008.01.T01:intron 30.0%
TGCACTATTTCCATATGATT+TGG - Chr7:71900419-71900438 MsG0780040008.01.T01:intron 30.0%
TTTCTACTTTCTTCTTCACA+TGG + Chr7:71900567-71900586 None:intergenic 30.0%
TTTGAAAAAGAAAGTTGCGT+GGG - Chr7:71900207-71900226 MsG0780040008.01.T01:intron 30.0%
! ATTTTACACATTCACAAGGT+CGG - Chr7:71898460-71898479 MsG0780040008.01.T01:intron 30.0%
! TACACATCTTGCAATGATTT+TGG + Chr7:71899400-71899419 None:intergenic 30.0%
! TTAATTCCTTGGTAGACTTT+TGG + Chr7:71899701-71899720 None:intergenic 30.0%
! TTTTAATGAGGAATTCTGTC+AGG - Chr7:71901211-71901230 MsG0780040008.01.T01:five_prime_UTR 30.0%
! TTTTCGTCTGAATTTGATGT+TGG - Chr7:71897731-71897750 MsG0780040008.01.T01:CDS 30.0%
!! GAAGATTTGCTATGAATCTT+GGG + Chr7:71900357-71900376 None:intergenic 30.0%
!! GTAGCATTGACATGAAAATT+TGG - Chr7:71898687-71898706 MsG0780040008.01.T01:intron 30.0%
!! TGTAGCTTTAATGTTGAACT+AGG + Chr7:71900394-71900413 None:intergenic 30.0%
!! TTTTGAAAAAGAAAGTTGCG+TGG - Chr7:71900206-71900225 MsG0780040008.01.T01:intron 30.0%
!! TTTTGCAGTTTTGGCAAATT+TGG + Chr7:71897307-71897326 None:intergenic 30.0%
!!! AACAGGTTCTAGTTTTAATG+AGG - Chr7:71901199-71901218 MsG0780040008.01.T01:five_prime_UTR 30.0%
!!! AAGTTTTGTTCCTTTCATTG+TGG - Chr7:71898154-71898173 MsG0780040008.01.T01:intron 30.0%
!!! CAATGATTTTGGAATCGATA+AGG + Chr7:71899389-71899408 None:intergenic 30.0%
AAATATTTGACTGGCAATCC+AGG + Chr7:71898444-71898463 None:intergenic 35.0%
AATTGGCAAAAATGCCGAAA+TGG - Chr7:71898214-71898233 MsG0780040008.01.T01:intron 35.0%
AATTGGTTAAAGGGTGATGT+AGG - Chr7:71898922-71898941 MsG0780040008.01.T01:CDS 35.0%
ACAAACAATTGGTCAAGCAT+TGG + Chr7:71900501-71900520 None:intergenic 35.0%
ACAGAAAGCTGCAAATAAGA+TGG + Chr7:71899048-71899067 None:intergenic 35.0%
ACAGCAATTGACAAGTAGTA+GGG + Chr7:71899729-71899748 None:intergenic 35.0%
ACCAGAGGTAATAACATTCA+AGG + Chr7:71898562-71898581 None:intergenic 35.0%
AGCAACAAGAAAACTAGAGA+TGG - Chr7:71900586-71900605 MsG0780040008.01.T01:CDS 35.0%
AGCAACATAAATGCCAAGAT+TGG - Chr7:71900706-71900725 MsG0780040008.01.T01:CDS 35.0%
ATCCAAATTGAATGATTGGG+GGG - Chr7:71900873-71900892 MsG0780040008.01.T01:CDS 35.0%
ATGGAGTTAGATATAGAGGA+AGG - Chr7:71898369-71898388 MsG0780040008.01.T01:intron 35.0%
ATTGGTTAAAGGGTGATGTA+GGG - Chr7:71898923-71898942 MsG0780040008.01.T01:CDS 35.0%
CTCAAAAGATGTTCCATAAC+TGG + Chr7:71900670-71900689 None:intergenic 35.0%
CTCCTACTTGACAATGAAAT+TGG - Chr7:71898974-71898993 MsG0780040008.01.T01:CDS 35.0%
GAAAATAGGTCAGTTATTCC+GGG + Chr7:71899915-71899934 None:intergenic 35.0%
GAAACTAGCAAAGAATGGTA+AGG + Chr7:71898842-71898861 None:intergenic 35.0%
GAACTAGGTACAACTAAAGT+TGG + Chr7:71900379-71900398 None:intergenic 35.0%
GACCAATTTCATTGTCAAGT+AGG + Chr7:71898979-71898998 None:intergenic 35.0%
GCAACAAGAAAACTAGAGAT+GGG - Chr7:71900587-71900606 MsG0780040008.01.T01:CDS 35.0%
GCAACTGATGATATTCAAGA+AGG - Chr7:71901090-71901109 MsG0780040008.01.T01:CDS 35.0%
GGGAGTAATATACTAGTATG+AGG - Chr7:71900126-71900145 MsG0780040008.01.T01:intron 35.0%
GTAGGGTAGTATTAATTCCT+TGG + Chr7:71899712-71899731 None:intergenic 35.0%
GTCATGCTTGGTTTATCTAT+AGG - Chr7:71900472-71900491 MsG0780040008.01.T01:intron 35.0%
TACAGCAATTGACAAGTAGT+AGG + Chr7:71899730-71899749 None:intergenic 35.0%
TCAATGTACAGAGTTCACAT+GGG - Chr7:71900294-71900313 MsG0780040008.01.T01:intron 35.0%
TCATATATTGCTGTCATGCT+TGG - Chr7:71900460-71900479 MsG0780040008.01.T01:intron 35.0%
TGGAGTTAGATATAGAGGAA+GGG - Chr7:71898370-71898389 MsG0780040008.01.T01:intron 35.0%
TGGGTTTAATAGCTTGGAAA+AGG - Chr7:71900226-71900245 MsG0780040008.01.T01:intron 35.0%
TTCAAATTCCGCTACGAAAA+CGG + Chr7:71897534-71897553 None:intergenic 35.0%
TTCAATGTACAGAGTTCACA+TGG - Chr7:71900293-71900312 MsG0780040008.01.T01:intron 35.0%
TTCGATGGAGTTAGATATAG+AGG - Chr7:71898365-71898384 MsG0780040008.01.T01:intron 35.0%
TTGAATGTTATTACCTCTGG+TGG - Chr7:71898561-71898580 MsG0780040008.01.T01:intron 35.0%
! AGATATGACATATGATGGTG+TGG - Chr7:71899354-71899373 MsG0780040008.01.T01:intron 35.0%
! ATGAATCTGGTCTTCTTCTT+TGG - Chr7:71897783-71897802 MsG0780040008.01.T01:intron 35.0%
! CCGGTTTAATTGACTTACTT+TGG + Chr7:71900100-71900119 None:intergenic 35.0%
! GTGACATTGAACTAGGTTTT+CGG + Chr7:71897357-71897376 None:intergenic 35.0%
! GTTATGGAACATCTTTTGAG+TGG - Chr7:71900670-71900689 MsG0780040008.01.T01:CDS 35.0%
! TCTCATTAGTTTCGGTTACT+AGG - Chr7:71898804-71898823 MsG0780040008.01.T01:intron 35.0%
! TGAATCTGGTCTTCTTCTTT+GGG - Chr7:71897784-71897803 MsG0780040008.01.T01:intron 35.0%
! TTTTGCCTGTCCTTAAGTTA+GGG - Chr7:71899191-71899210 MsG0780040008.01.T01:intron 35.0%
! TTTTTGCCTGTCCTTAAGTT+AGG - Chr7:71899190-71899209 MsG0780040008.01.T01:intron 35.0%
!! GGAAGATTTGCTATGAATCT+TGG + Chr7:71900358-71900377 None:intergenic 35.0%
AAGTACCAGATAGAGAGGAA+GGG + Chr7:71898864-71898883 None:intergenic 40.0%
AATGCTCTTCCTGCATATGT+TGG + Chr7:71899091-71899110 None:intergenic 40.0%
AATGTTATTACCTCTGGTGG+AGG - Chr7:71898564-71898583 MsG0780040008.01.T01:intron 40.0%
ACAAAGGTTCAATCCTTGTC+AGG - Chr7:71898410-71898429 MsG0780040008.01.T01:intron 40.0%
ACAAATTAACAAACCTGGGG+AGG + Chr7:71897830-71897849 None:intergenic 40.0%
ACATACAAGGGAAATGCCAT+GGG + Chr7:71901141-71901160 None:intergenic 40.0%
ACTAGCAAAGAATGGTAAGG+AGG + Chr7:71898839-71898858 None:intergenic 40.0%
AGCACATTCGCTATGAATCA+AGG - Chr7:71901019-71901038 MsG0780040008.01.T01:CDS 40.0%
AGGAGAAGAAGAAAACTCGA+AGG - Chr7:71900776-71900795 MsG0780040008.01.T01:CDS 40.0%
AGTAAACTAGGCTGCATTGT+TGG - Chr7:71898648-71898667 MsG0780040008.01.T01:intron 40.0%
AGTAGAAACGATCTCGTGAA+CGG + Chr7:71897483-71897502 None:intergenic 40.0%
ATACGAGAAAGAGAGTGAGA+GGG - Chr7:71901055-71901074 MsG0780040008.01.T01:CDS 40.0%
ATGTTATTACCTCTGGTGGA+GGG - Chr7:71898565-71898584 MsG0780040008.01.T01:intron 40.0%
CAATGTACAGAGTTCACATG+GGG - Chr7:71900295-71900314 MsG0780040008.01.T01:intron 40.0%
CACGAGATCGTTTCTACTTT+GGG - Chr7:71897485-71897504 MsG0780040008.01.T01:intron 40.0%
CATTCGCTATGAATCAAGGA+AGG - Chr7:71901023-71901042 MsG0780040008.01.T01:CDS 40.0%
CCTTAAATGGCCCTAACTTA+AGG + Chr7:71899204-71899223 None:intergenic 40.0%
CCTTAAGTTAGGGCCATTTA+AGG - Chr7:71899201-71899220 MsG0780040008.01.T01:intron 40.0%
CTATGAATCAAGGAAGGCTA+GGG - Chr7:71901029-71901048 MsG0780040008.01.T01:CDS 40.0%
GAAGGGAAACTAGCAAAGAA+TGG + Chr7:71898847-71898866 None:intergenic 40.0%
GAATCACCAAAAGTCTACCA+AGG - Chr7:71899692-71899711 MsG0780040008.01.T01:intron 40.0%
GACGAAATGACAATCACGTT+TGG + Chr7:71898302-71898321 None:intergenic 40.0%
GCAAACTAAACAGAGTTTCG+CGG + Chr7:71897234-71897253 None:intergenic 40.0%
GCCTTGAATGTTATTACCTC+TGG - Chr7:71898558-71898577 MsG0780040008.01.T01:intron 40.0%
GGAGTTAGATATAGAGGAAG+GGG - Chr7:71898371-71898390 MsG0780040008.01.T01:intron 40.0%
GTAAGTCAATTAAACCGGGA+CGG - Chr7:71900102-71900121 MsG0780040008.01.T01:intron 40.0%
GTTACATTACCAAGGTTCGA+TGG - Chr7:71898350-71898369 MsG0780040008.01.T01:intron 40.0%
TAGTCTTTGTACGTTTGTGC+AGG - Chr7:71899303-71899322 MsG0780040008.01.T01:intron 40.0%
TATCTAACTCCATCGAACCT+TGG + Chr7:71898362-71898381 None:intergenic 40.0%
TCACGAGATCGTTTCTACTT+TGG - Chr7:71897484-71897503 MsG0780040008.01.T01:intron 40.0%
TCATCCCTATTCTTCACAAC+CGG + Chr7:71897569-71897588 None:intergenic 40.0%
TCCAAATTGAATGATTGGGG+GGG - Chr7:71900874-71900893 MsG0780040008.01.T01:CDS 40.0%
TGAAGCAAACCAACATATGC+AGG - Chr7:71899079-71899098 MsG0780040008.01.T01:intron 40.0%
TTCCATAACTGGTACACTGT+CGG + Chr7:71900659-71900678 None:intergenic 40.0%
! AAGAGCACACAAGGAATAGA+GGG - Chr7:71900734-71900753 MsG0780040008.01.T01:CDS 40.0%
! CATAAATGCCAAGATTGGCT+TGG - Chr7:71900711-71900730 MsG0780040008.01.T01:CDS 40.0%
! GCATTTTTGCCAATTGAGCT+AGG + Chr7:71898209-71898228 None:intergenic 40.0%
! TGTTGGTTACTAGGTGAATG+AGG - Chr7:71898665-71898684 MsG0780040008.01.T01:intron 40.0%
!! AATAACATTCAAGGCACCGT+GGG + Chr7:71898553-71898572 None:intergenic 40.0%
!! GTTTTCGTAGCGGAATTTGA+AGG - Chr7:71897533-71897552 MsG0780040008.01.T01:intron 40.0%
!! TAATAACATTCAAGGCACCG+TGG + Chr7:71898554-71898573 None:intergenic 40.0%
AACCGGTGAGACCTTCTATA+CGG + Chr7:71897454-71897473 None:intergenic 45.0%
AACGCAAGTACCAGATAGAG+AGG + Chr7:71898869-71898888 None:intergenic 45.0%
AATGGCCCTAACTTAAGGAC+AGG + Chr7:71899199-71899218 None:intergenic 45.0%
AGAGCACACAAGGAATAGAG+GGG - Chr7:71900735-71900754 MsG0780040008.01.T01:CDS 45.0%
AGTTTCCCTTCCTCTCTATC+TGG - Chr7:71898856-71898875 MsG0780040008.01.T01:intron 45.0%
ATAGAGGGGATGCCATGTTA+CGG - Chr7:71900749-71900768 MsG0780040008.01.T01:CDS 45.0%
ATAGGTCAGTTATTCCGGGA+CGG + Chr7:71899911-71899930 None:intergenic 45.0%
ATCGTCTAGCCTAGCCATTT+CGG + Chr7:71898231-71898250 None:intergenic 45.0%
ATGGGATGAGGTTTCTTGGA+AGG + Chr7:71901123-71901142 None:intergenic 45.0%
CAAGTACCAGATAGAGAGGA+AGG + Chr7:71898865-71898884 None:intergenic 45.0%
CACATACAAGGGAAATGCCA+TGG + Chr7:71901142-71901161 None:intergenic 45.0%
CTTCTCCTTGTACCGTAACA+TGG + Chr7:71900764-71900783 None:intergenic 45.0%
CTTGTGTCGCAATAGTCACA+CGG + Chr7:71897182-71897201 None:intergenic 45.0%
GAAACTCACACACACAAGTG+GGG + Chr7:71898280-71898299 None:intergenic 45.0%
GAAGAGGAAGAGGAATTTGG+AGG - Chr7:71897616-71897635 MsG0780040008.01.T01:CDS 45.0%
GATACGAGAAAGAGAGTGAG+AGG - Chr7:71901054-71901073 MsG0780040008.01.T01:CDS 45.0%
GCAAAAATGCCGAAATGGCT+AGG - Chr7:71898219-71898238 MsG0780040008.01.T01:intron 45.0%
GCTACGAAAACGGAGTCATT+CGG + Chr7:71897524-71897543 None:intergenic 45.0%
GCTATGAATCAAGGAAGGCT+AGG - Chr7:71901028-71901047 MsG0780040008.01.T01:CDS 45.0%
GGAAACTCACACACACAAGT+GGG + Chr7:71898281-71898300 None:intergenic 45.0%
GGTTCCGGTTGTGAAGAATA+GGG - Chr7:71897562-71897581 MsG0780040008.01.T01:CDS 45.0%
GGTTGTGAAGAATAGGGATG+AGG - Chr7:71897568-71897587 MsG0780040008.01.T01:CDS 45.0%
GTTGCGTGGGTTTAATAGCT+TGG - Chr7:71900220-71900239 MsG0780040008.01.T01:intron 45.0%
TAGGGATGAGGTGTATGAAC+AGG - Chr7:71897580-71897599 MsG0780040008.01.T01:CDS 45.0%
TGCGAAGAGGAAGAGGAATT+TGG - Chr7:71897613-71897632 MsG0780040008.01.T01:CDS 45.0%
TGGAAACTCACACACACAAG+TGG + Chr7:71898282-71898301 None:intergenic 45.0%
TGGTGGAAAGATGAAGAGGT+GGG + Chr7:71897419-71897438 None:intergenic 45.0%
TGGTTCCGGTTGTGAAGAAT+AGG - Chr7:71897561-71897580 MsG0780040008.01.T01:CDS 45.0%
TGGTTGAGTGGATGATGCAA+AGG - Chr7:71899798-71899817 MsG0780040008.01.T01:intron 45.0%
TGTGGCATCAAACTTTGCAC+AGG - Chr7:71900989-71901008 MsG0780040008.01.T01:CDS 45.0%
TTAGACTGCGAGGCAAACAA+AGG - Chr7:71898394-71898413 MsG0780040008.01.T01:intron 45.0%
TTCCAAGAAACCTCATCCCA+TGG - Chr7:71901122-71901141 MsG0780040008.01.T01:CDS 45.0%
TTGTACGTTTGTGCAGGTCT+GGG - Chr7:71899309-71899328 MsG0780040008.01.T01:intron 45.0%
TTTGTACGTTTGTGCAGGTC+TGG - Chr7:71899308-71899327 MsG0780040008.01.T01:intron 45.0%
! AGAATGGTAAGGAGGTGCAA+TGG + Chr7:71898831-71898850 None:intergenic 45.0%
! AGGCTGCATTGTTGGTTACT+AGG - Chr7:71898656-71898675 MsG0780040008.01.T01:intron 45.0%
! GAAGAGCACACAAGGAATAG+AGG - Chr7:71900733-71900752 MsG0780040008.01.T01:CDS 45.0%
! GAATGACTCCGTTTTCGTAG+CGG - Chr7:71897523-71897542 MsG0780040008.01.T01:intron 45.0%
!! AGTGAGAGGGCGATTTGTTA+AGG - Chr7:71901068-71901087 MsG0780040008.01.T01:CDS 45.0%
AAACAGAGTTTCGCGGAGTC+TGG + Chr7:71897227-71897246 None:intergenic 50.0%
AAGGGAAATGCCATGGGATG+AGG + Chr7:71901135-71901154 None:intergenic 50.0%
ACACACAAGTGGGGAAACCA+GGG + Chr7:71898271-71898290 None:intergenic 50.0%
AGTCAATTAAACCGGGACGG+AGG - Chr7:71900105-71900124 MsG0780040008.01.T01:intron 50.0%
ATTTGAAGGTCCGGTGGTTC+CGG - Chr7:71897547-71897566 MsG0780040008.01.T01:CDS 50.0%
GAAACGATCTCGTGAACGGA+AGG + Chr7:71897479-71897498 None:intergenic 50.0%
GACGGAAGTCCTAGCTCAAT+TGG - Chr7:71898197-71898216 MsG0780040008.01.T01:intron 50.0%
GCCCCCCCAATCATTCAATT+TGG + Chr7:71900878-71900897 None:intergenic 50.0%
GGATGAGGTGTATGAACAGG+TGG - Chr7:71897583-71897602 MsG0780040008.01.T01:CDS 50.0%
GGATGCCATGTTACGGTACA+AGG - Chr7:71900756-71900775 MsG0780040008.01.T01:CDS 50.0%
GGTGAAGCAACGAACTGAAG+CGG + Chr7:71897336-71897355 None:intergenic 50.0%
GGTGGAAAGATGAAGAGGTG+GGG + Chr7:71897418-71897437 None:intergenic 50.0%
GGTTCAATCCTTGTCAGGAG+AGG - Chr7:71898415-71898434 MsG0780040008.01.T01:intron 50.0%
GTACAGAGTTCACATGGGGT+GGG - Chr7:71900299-71900318 MsG0780040008.01.T01:intron 50.0%
GTATATTACTCCCTCCGTCC+CGG + Chr7:71900119-71900138 None:intergenic 50.0%
GTCAATTAAACCGGGACGGA+GGG - Chr7:71900106-71900125 MsG0780040008.01.T01:intron 50.0%
GTGCTCTTCCAAGCCAATCT+TGG + Chr7:71900722-71900741 None:intergenic 50.0%
TACAGAGTTCACATGGGGTG+GGG - Chr7:71900300-71900319 MsG0780040008.01.T01:intron 50.0%
TAGGCTAGACGATGTGACGA+GGG - Chr7:71898238-71898257 MsG0780040008.01.T01:intron 50.0%
TCACAAGGTCGGCATATCTG+TGG - Chr7:71898471-71898490 MsG0780040008.01.T01:intron 50.0%
TGAGGTGTATGAACAGGTGG+TGG - Chr7:71897586-71897605 MsG0780040008.01.T01:CDS 50.0%
TGCCATGGGATGAGGTTTCT+TGG + Chr7:71901127-71901146 None:intergenic 50.0%
TGGAAGTTGCGAAGAGGAAG+AGG - Chr7:71897606-71897625 MsG0780040008.01.T01:CDS 50.0%
TGTACAGAGTTCACATGGGG+TGG - Chr7:71900298-71900317 MsG0780040008.01.T01:intron 50.0%
TTCAATGTCACCGCTGCGAT+TGG - Chr7:71897366-71897385 MsG0780040008.01.T01:intron 50.0%
TTCTATTACTCCCTCCGTCC+CGG - Chr7:71899894-71899913 MsG0780040008.01.T01:intron 50.0%
TTCTTCACAACCGGAACCAC+CGG + Chr7:71897560-71897579 None:intergenic 50.0%
! CGTAGCGGAATTTGAAGGTC+CGG - Chr7:71897538-71897557 MsG0780040008.01.T01:intron 50.0%
! GTGGTGGAAAGATGAAGAGG+TGG + Chr7:71897420-71897439 None:intergenic 50.0%
!! GTGGTGGTGGAAAGATGAAG+AGG + Chr7:71897423-71897442 None:intergenic 50.0%
!! TTGGCTTGGAAGAGCACACA+AGG - Chr7:71900725-71900744 MsG0780040008.01.T01:CDS 50.0%
!!! CGGCGTCGTTTTTGCAGTTT+TGG + Chr7:71897316-71897335 None:intergenic 50.0%
AGCGGAATTTGAAGGTCCGG+TGG - Chr7:71897541-71897560 MsG0780040008.01.T01:CDS 55.0%
CACACAAGTGGGGAAACCAG+GGG + Chr7:71898270-71898289 None:intergenic 55.0%
CACACACAAGTGGGGAAACC+AGG + Chr7:71898272-71898291 None:intergenic 55.0%
CGCAGCGGTGACATTGAACT+AGG + Chr7:71897364-71897383 None:intergenic 55.0%
CGCCGACAGTGTACCAGTTA+TGG - Chr7:71900654-71900673 MsG0780040008.01.T01:CDS 55.0%
CGCCGTATAGAAGGTCTCAC+CGG - Chr7:71897449-71897468 MsG0780040008.01.T01:intron 55.0%
CGCTGCGATTGGAACTCTCA+CGG - Chr7:71897377-71897396 MsG0780040008.01.T01:intron 55.0%
CGGTGAGACCTTCTATACGG+CGG + Chr7:71897451-71897470 None:intergenic 55.0%
CGTGAGAGTTCCAATCGCAG+CGG + Chr7:71897379-71897398 None:intergenic 55.0%
CTAGAGATTCCCTCCACCAG+AGG + Chr7:71898577-71898596 None:intergenic 55.0%
CTAGGCTAGACGATGTGACG+AGG - Chr7:71898237-71898256 MsG0780040008.01.T01:intron 55.0%
CTCGTGAACGGAAGGACAAC+CGG + Chr7:71897471-71897490 None:intergenic 55.0%
CTCTGGTGGAGGGAATCTCT+AGG - Chr7:71898575-71898594 MsG0780040008.01.T01:intron 55.0%
CTTGAGTGCGAGTGCGTTTG+CGG + Chr7:71897273-71897292 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr7:71899907-71899926 None:intergenic 55.0%
GTCGGCGCCACTGTATGTTA+TGG + Chr7:71900641-71900660 None:intergenic 55.0%
TGAGACCTTCTATACGGCGG+CGG + Chr7:71897448-71897467 None:intergenic 55.0%
TGCGATTGGAACTCTCACGG+CGG - Chr7:71897380-71897399 MsG0780040008.01.T01:intron 55.0%
TGGGGAGGGACAATAGAGGT+CGG - Chr7:71900318-71900337 MsG0780040008.01.T01:intron 55.0%
!! AGGTGGTGGAAGTTGCGAAG+AGG - Chr7:71897600-71897619 MsG0780040008.01.T01:CDS 55.0%
AACCTGGGGAGGCTGATACG+TGG + Chr7:71897819-71897838 None:intergenic 60.0%
ACCTGGGGAGGCTGATACGT+GGG + Chr7:71897818-71897837 None:intergenic 60.0%
AGAGTTCACATGGGGTGGGG+AGG - Chr7:71900303-71900322 MsG0780040008.01.T01:intron 60.0%
CACAACCGCCGCCGTATAGA+AGG - Chr7:71897440-71897459 MsG0780040008.01.T01:intron 60.0%
CCAGGTCTCCTCTCCTGACA+AGG + Chr7:71898426-71898445 None:intergenic 60.0%
CCTTGTCAGGAGAGGAGACC+TGG - Chr7:71898423-71898442 MsG0780040008.01.T01:intron 60.0%
CTTCTATACGGCGGCGGTTG+TGG + Chr7:71897442-71897461 None:intergenic 60.0%
GAGGAAGGGGTTAGACTGCG+AGG - Chr7:71898384-71898403 MsG0780040008.01.T01:intron 60.0%
GAGTTCACATGGGGTGGGGA+GGG - Chr7:71900304-71900323 MsG0780040008.01.T01:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr7:71899908-71899927 None:intergenic 60.0%
GTGACGAGGGTTTGAACCCC+TGG - Chr7:71898251-71898270 MsG0780040008.01.T01:intron 60.0%
CGTTTGCGGAGTGCACGTGC+TGG + Chr7:71897259-71897278 None:intergenic 65.0%
CTATACGGCGGCGGTTGTGG+TGG + Chr7:71897439-71897458 None:intergenic 65.0%
GGGGTGGGGAGGGACAATAG+AGG - Chr7:71900314-71900333 MsG0780040008.01.T01:intron 65.0%
TCCCACGTATCAGCCTCCCC+AGG - Chr7:71897814-71897833 MsG0780040008.01.T01:intron 65.0%
TACGGCGGCGGTTGTGGTGG+TGG + Chr7:71897436-71897455 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 71897068 71901270 71897068 ID=MsG0780040008.01;Name=MsG0780040008.01
Chr7 mRNA 71897068 71901270 71897068 ID=MsG0780040008.01.T01;Parent=MsG0780040008.01;Name=MsG0780040008.01.T01;_AED=0.36;_eAED=0.36;_QI=102|1|1|1|1|1|4|154|390
Chr7 exon 71897068 71897327 71897068 ID=MsG0780040008.01.T01:exon:13423;Parent=MsG0780040008.01.T01
Chr7 exon 71897541 71897800 71897541 ID=MsG0780040008.01.T01:exon:13422;Parent=MsG0780040008.01.T01
Chr7 exon 71898873 71899013 71898873 ID=MsG0780040008.01.T01:exon:13421;Parent=MsG0780040008.01.T01
Chr7 exon 71900503 71901270 71900503 ID=MsG0780040008.01.T01:exon:13420;Parent=MsG0780040008.01.T01
Chr7 five_prime_UTR 71901169 71901270 71901169 ID=MsG0780040008.01.T01:five_prime_utr;Parent=MsG0780040008.01.T01
Chr7 CDS 71900503 71901168 71900503 ID=MsG0780040008.01.T01:cds;Parent=MsG0780040008.01.T01
Chr7 CDS 71898873 71899013 71898873 ID=MsG0780040008.01.T01:cds;Parent=MsG0780040008.01.T01
Chr7 CDS 71897541 71897800 71897541 ID=MsG0780040008.01.T01:cds;Parent=MsG0780040008.01.T01
Chr7 CDS 71897222 71897327 71897222 ID=MsG0780040008.01.T01:cds;Parent=MsG0780040008.01.T01
Chr7 three_prime_UTR 71897068 71897221 71897068 ID=MsG0780040008.01.T01:three_prime_utr;Parent=MsG0780040008.01.T01
Gene Sequence

>MsG0780040008.01.T01

ATGTCGTTTCCGTGTGACTATTGCGACACAAGAAACGCAGTGCTATATTGCAAACCAGACTCCGCGAAACTCTGTTTAGTTTGCGACCAGCACGTGCACTCCGCAAACGCACTCGCACTCAAGCACGTGCGTTTCCAAATTTGCCAAAACTGCAAAAACGACGCCGCTTCAGTTCGTTGCTTCACCGAAAACCTAGTTCAATGTCACCGCTGCGATTGGAACTCTCACGGCGGCGACGACGACAACCCCACCTCTTCATCTTTCCACCACCACAACCGCCGCCGTATAGAAGGTCTCACCGGTTGTCCTTCCGTTCACGAGATCGTTTCTACTTTGGGACTTGATTTGAAGCCGAATGACTCCGTTTTCGTAGCGGAATTTGAAGGTCCGGTGGTTCCGGTTGTGAAGAATAGGGATGAGGTGTATGAACAGGTGGTGGAAGTTGCGAAGAGGAAGAGGAATTTGGAGGAAGATGAAAATGAACTGAGATTCAATGATTGTTGTAATGATGTTGATGATTTGTTGTTGCTTCAGCAAACTCCGTTTACTTCTTTGCTTAATTTTTCGTCTGAATTTGATGTTGGTGCTAAGAGAAATAGTAATGATTATGGAAATGAATCTGGTCTTCTTCTTTGGGATCGTAATCCCACGTATCAGCCTCCCCAGGTCTGGGATTTTCAATTACAGAAATCAAGAGATATGACATATGATGGTGTGGAAAATGCTTCCTTATCGATTCCAAAATCATTGCAAGATGTGTACAATATGAATTGCTCAACATTTGGTGATGATATTCTATCAAGAAATAATCAATCGGATCAGTCATCATCAAGCCATGTGAAGAAGAAAGTAGAAAGCAACAAGAAAACTAGAGATGGGTTGTCTTCTGAGTCCAAATTGATTGAATCCATAACATACAGTGGCGCCGACAGTGTACCAGTTATGGAACATCTTTTGAGTGGCAGTGAAAATGTTAGCAACATAAATGCCAAGATTGGCTTGGAAGAGCACACAAGGAATAGAGGGGATGCCATGTTACGGTACAAGGAGAAGAAGAAAACTCGAAGGTTTGACAAGCACATTCGCTATGAATCAAGGAAGGCTAGGGCTGATACGAGAAAGAGAGTGAGAGGGCGATTTGTTAAGGCAACTGATGATATTCAAGAAGGATGA
Protein sequence

>MsG0780040008.01.T01

MSFPCDYCDTRNAVLYCKPDSAKLCLVCDQHVHSANALALKHVRFQICQNCKNDAASVRCFTENLVQCHRCDWNSHGGDDDNPTSSSFHHHNRRRIEGLTGCPSVHEIVSTLGLDLKPNDSVFVAEFEGPVVPVVKNRDEVYEQVVEVAKRKRNLEEDENELRFNDCCNDVDDLLLLQQTPFTSLLNFSSEFDVGAKRNSNDYGNESGLLLWDRNPTYQPPQVWDFQLQKSRDMTYDGVENASLSIPKSLQDVYNMNCSTFGDDILSRNNQSDQSSSSHVKKKVESNKKTRDGLSSESKLIESITYSGADSVPVMEHLLSGSENVSNINAKIGLEEHTRNRGDAMLRYKEKKKTRRFDKHIRYESRKARADTRKRVRGRFVKATDDIQEG*