AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017254.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017254.01.T01 MTR_3g103970 94.684 696 25 2 1 692 1 688 0.0 1332
MsG0380017254.01.T01 MTR_1g016920 48.592 710 291 14 1 692 1 654 0.0 543
MsG0380017254.01.T01 MTR_1g016920 46.252 707 276 14 1 692 1 618 1.70e-171 504
MsG0380017254.01.T01 MTR_1g016920 49.808 520 232 7 185 692 13 515 3.83e-144 431
MsG0380017254.01.T01 MTR_1g016920 46.615 517 217 7 185 692 13 479 2.76e-129 391
MsG0380017254.01.T01 MTR_8g015480 39.599 399 193 11 318 687 349 728 1.96e-64 227
MsG0380017254.01.T01 MTR_8g015480 41.045 134 62 4 1 120 1 131 2.15e-16 83.6
MsG0380017254.01.T01 MTR_8g015470 55.769 52 23 0 1 52 32 83 1.39e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017254.01.T01 AT2G25930 38.095 735 368 24 1 691 1 692 7.67e-104 332
MsG0380017254.01.T01 AT3G21320 31.726 394 182 12 307 692 224 538 1.02e-39 154

Find 203 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATATGGCTGCCGAAAA+TGG 0.133232 3:+94095678 MsG0380017254.01.T01:CDS
GTAAATGTCTGCTCCTTATT+TGG 0.157418 3:-94092990 None:intergenic
TATGCAGGCTTTAGGAATTT+TGG 0.180510 3:+94092873 MsG0380017254.01.T01:CDS
GCCTGACGAGTAAGTGTTTC+AGG 0.204027 3:-94092675 None:intergenic
TATCCTGGGCCTGGATTTAC+AGG 0.257860 3:+94095789 MsG0380017254.01.T01:CDS
GAAGCTGCTGCTTTCATAAA+TGG 0.265876 3:-94095948 None:intergenic
GGATTTACAGGAACAAATTA+TGG 0.283083 3:+94095801 MsG0380017254.01.T01:CDS
ATTTGACATAAGGAAGATTA+AGG 0.300750 3:+94092033 MsG0380017254.01.T01:five_prime_UTR
TTCTCTCTTCTTGAATTGAT+TGG 0.305188 3:-94096358 None:intergenic
TTTAAATTTCCACTATGTAT+AGG 0.320463 3:-94093311 None:intergenic
GGTTGACGAGGATGACTTTA+GGG 0.321745 3:+94092773 MsG0380017254.01.T01:CDS
GGCACTGAATATCATGATAC+TGG 0.325732 3:+94093278 MsG0380017254.01.T01:CDS
GCCCTTCGGAGCTCCTCCTT+CGG 0.326748 3:+94095833 MsG0380017254.01.T01:CDS
AGCTCACTTATGCAGGCTTT+AGG 0.334186 3:+94092865 MsG0380017254.01.T01:CDS
GGACTAGTTTGGTTTGCTAT+AGG 0.335922 3:-94093239 None:intergenic
TCAAATTGTAAGAGAAAGAT+AGG 0.336816 3:-94091693 None:intergenic
GTAAATCCAGGCCCAGGATA+TGG 0.337644 3:-94095786 None:intergenic
AAATCCACACCATGGAAATA+TGG 0.342107 3:+94095665 MsG0380017254.01.T01:CDS
AGGTTGACGAGGATGACTTT+AGG 0.344077 3:+94092772 MsG0380017254.01.T01:CDS
GACTAGTTTGGTTTGCTATA+GGG 0.345020 3:-94093238 None:intergenic
TCAAAGCAGGGAGAATTAAT+CGG 0.347948 3:+94092901 MsG0380017254.01.T01:CDS
CCCTTCGGAGCTCCTCCTTC+GGG 0.362652 3:+94095834 MsG0380017254.01.T01:CDS
AGCACCTCCTAGGAATAAAA+TGG 0.368651 3:+94092142 MsG0380017254.01.T01:CDS
ACTGTATTTGGGTGGTGGGG+TGG 0.375585 3:-94092209 None:intergenic
TGAGTTGCATAGACTGATAA+AGG 0.377354 3:+94095268 MsG0380017254.01.T01:CDS
TTCTCCATTTGATGTATCTC+TGG 0.383278 3:-94093018 None:intergenic
TCCACAAGTAAGTCCAAATA+AGG 0.383979 3:+94092977 MsG0380017254.01.T01:CDS
GTTGCTCCATTTCTCTGAAC+AGG 0.386712 3:-94096080 None:intergenic
ACATGTAACCTAGGGAATAA+TGG 0.397904 3:-94092092 None:intergenic
GATGATGTTGTTGCAATAAT+AGG 0.400438 3:+94093398 MsG0380017254.01.T01:CDS
CAGATTCAGTTGCCGATCTT+CGG 0.401098 3:-94096322 None:intergenic
AATTTACCTGTTCAGAGAAA+TGG 0.403181 3:+94096074 MsG0380017254.01.T01:CDS
TATGTCTGGCATATCAAAAT+TGG 0.410243 3:+94096546 MsG0380017254.01.T01:three_prime_UTR
CCGAAAATGGGATGGGTCCC+TGG 0.411329 3:+94095691 MsG0380017254.01.T01:CDS
AAATTAGGGATTAGAGAGAA+AGG 0.424842 3:-94091666 None:intergenic
CAAAGCAGGGAGAATTAATC+GGG 0.426260 3:+94092902 MsG0380017254.01.T01:CDS
CAGGTCCAACAACTGATTGC+TGG 0.427752 3:+94095399 MsG0380017254.01.T01:intron
TGTGATTACAATTTGACATA+AGG 0.429142 3:+94092023 MsG0380017254.01.T01:five_prime_UTR
GAGTCTCAATCCAATGGAAC+TGG 0.429520 3:+94093164 MsG0380017254.01.T01:CDS
TTATTCCTAGGAGGTGCTCT+TGG 0.430128 3:-94092137 None:intergenic
TAGCCTCGGATGGACTAGTT+TGG 0.434950 3:-94093250 None:intergenic
GGGAAGTAAGCATGGCTACC+TGG 0.435218 3:-94095909 None:intergenic
TGGTGTTTCAATCAGTCACC+TGG 0.437898 3:+94095711 MsG0380017254.01.T01:CDS
GGGGAACTGTATTTGGGTGG+TGG 0.438129 3:-94092214 None:intergenic
TTTGCACGCGTGCAGAGAAC+TGG 0.438820 3:-94095995 None:intergenic
CCTCCACCGGAGACTCCTCC+AGG 0.440221 3:+94095891 MsG0380017254.01.T01:CDS
CATAAATGGCATGCTGCCAT+AGG 0.444416 3:-94095934 None:intergenic
GCTACTCCCTCTGGTTCAAC+TGG 0.448375 3:-94096245 None:intergenic
GTATATATTCGCTCAAAGAT+TGG 0.450203 3:+94092801 MsG0380017254.01.T01:CDS
CTAGACACCGTACACTTGAA+TGG 0.450975 3:-94096424 None:intergenic
GTAGCTCAGTCTATTGAAAC+AGG 0.454146 3:+94096263 MsG0380017254.01.T01:CDS
GGAGGAGTCTCCGGTGGAGG+TGG 0.456593 3:-94095888 None:intergenic
ACAACATTTCAAAGATCTCC+AGG 0.463568 3:+94093342 MsG0380017254.01.T01:CDS
TGGCTACCTGGAGGAGTCTC+CGG 0.463732 3:-94095897 None:intergenic
TGTCTCCCTTGTAGATTCAA+TGG 0.465145 3:-94093201 None:intergenic
AATTAGGGATTAGAGAGAAA+GGG 0.466876 3:-94091665 None:intergenic
TATGGAGGATGTGGGCCCTT+CGG 0.469411 3:+94095819 MsG0380017254.01.T01:CDS
ATTATTGCAACAACATCATC+AGG 0.473171 3:-94093395 None:intergenic
GTTGCCGATCTTCGGTTATG+AGG 0.473495 3:-94096314 None:intergenic
ACTTTCATGAATCCTTCCTA+TGG 0.474615 3:+94095861 MsG0380017254.01.T01:CDS
TCCTGAAACACTTACTCGTC+AGG 0.478130 3:+94092674 MsG0380017254.01.T01:CDS
CTATGGAATGCCACCTCCAC+CGG 0.479421 3:+94095878 MsG0380017254.01.T01:CDS
CCAGATCTATTGTTTGAAGA+TGG 0.482307 3:+94095426 MsG0380017254.01.T01:CDS
CTGGGAAAGTCTCTTCCGGA+TGG 0.484929 3:+94095456 MsG0380017254.01.T01:CDS
ATTCCTTGTGTCATTTCACT+AGG 0.486062 3:-94096167 None:intergenic
AGCAGCTCACGTCAAGGTGA+TGG 0.486184 3:+94093116 MsG0380017254.01.T01:CDS
TCCTTATTTGGACTTACTTG+TGG 0.488125 3:-94092978 None:intergenic
CCTGGAGGAGTCTCCGGTGG+AGG 0.489796 3:-94095891 None:intergenic
CTACCTGGCTCGAAGACGAC+GGG 0.491120 3:-94092235 None:intergenic
TATAAGCCATATCCTGGGCC+TGG 0.493111 3:+94095780 MsG0380017254.01.T01:CDS
TAATTTGTTCCTGTAAATCC+AGG 0.493238 3:-94095798 None:intergenic
GGGAACTGTATTTGGGTGGT+GGG 0.493443 3:-94092213 None:intergenic
GGAACTGTATTTGGGTGGTG+GGG 0.494923 3:-94092212 None:intergenic
CAGTGGTATGTAGATATGTC+TGG 0.495911 3:+94096532 MsG0380017254.01.T01:three_prime_UTR
GAAATATGGCTGCCGAAAAT+GGG 0.495984 3:+94095679 MsG0380017254.01.T01:CDS
ATCTTTGAGCGAATATATAC+AGG 0.497640 3:-94092798 None:intergenic
TGGTGTGGATTTCCAGCAAA+AGG 0.498051 3:-94095654 None:intergenic
CTAGTCTATAAGCCATATCC+TGG 0.499279 3:+94095774 MsG0380017254.01.T01:CDS
GGAACAAATTATGGAGGATG+TGG 0.499822 3:+94095810 MsG0380017254.01.T01:CDS
ATCACGTTGTCCAGTTCCAT+TGG 0.500565 3:-94093174 None:intergenic
CATGCTTACTTCCCTCCCTA+TGG 0.501584 3:+94095918 MsG0380017254.01.T01:CDS
TCTGGTTCAACTGGAACCAT+AGG 0.507234 3:-94096236 None:intergenic
GACGTGAGAAATGAGATTGA+TGG 0.508609 3:+94092951 MsG0380017254.01.T01:CDS
GGAAGACATAATTTCTCTCA+TGG 0.508641 3:-94092638 None:intergenic
GCACGTGTGGCATCGTGTAA+CGG 0.508686 3:+94096461 MsG0380017254.01.T01:three_prime_UTR
TAATACTACAAACTTTAAGC+AGG 0.510178 3:+94091820 MsG0380017254.01.T01:five_prime_UTR
GAAGATTAAGGATGAAGAGA+GGG 0.510459 3:+94092045 MsG0380017254.01.T01:exon
GCGATCCAGCAATCAGTTGT+TGG 0.510917 3:-94095404 None:intergenic
TCTAGTGCTGTTTATTCGCA+TGG 0.511952 3:+94096396 MsG0380017254.01.T01:exon
TGATGGGGCCATTATTCCCT+AGG 0.516727 3:+94092084 MsG0380017254.01.T01:CDS
GGAAGATTAAGGATGAAGAG+AGG 0.520349 3:+94092044 MsG0380017254.01.T01:exon
CAAAGTCGTCATTTATCTGA+AGG 0.521419 3:+94096014 MsG0380017254.01.T01:CDS
ACCCGAAGGAGGAGCTCCGA+AGG 0.522593 3:-94095835 None:intergenic
CCATCTTCAAACAATAGATC+TGG 0.523258 3:-94095426 None:intergenic
ATTGAATCTACAAGGGAGAC+AGG 0.525653 3:+94093203 MsG0380017254.01.T01:CDS
TCTGCCAGAGATACATCAAA+TGG 0.525772 3:+94093014 MsG0380017254.01.T01:CDS
GCAGCCATATTTCCATGGTG+TGG 0.528591 3:-94095669 None:intergenic
GTCTATGCAACTCAAACACT+TGG 0.531022 3:-94095259 None:intergenic
CATATTTCTCGTCAATCAGA+AGG 0.532999 3:+94092705 MsG0380017254.01.T01:CDS
TGAGAAACATACAAGTACTT+AGG 0.535812 3:-94096598 None:intergenic
TTATTTGGACTTACTTGTGG+AGG 0.536192 3:-94092975 None:intergenic
TCCTGTACTTTCTGCACGTG+TGG 0.538315 3:+94096448 MsG0380017254.01.T01:three_prime_UTR
CGGTGGAGGTGGCATTCCAT+AGG 0.539063 3:-94095877 None:intergenic
TTTCGGCAGCCATATTTCCA+TGG 0.540312 3:-94095674 None:intergenic
GTTTCAGGAGTTAAATGACC+AGG 0.541771 3:-94092660 None:intergenic
ATAGACTGAGCTACTCCCTC+TGG 0.543680 3:-94096254 None:intergenic
GAGGGCCAAGAGCACCTCCT+AGG 0.545147 3:+94092132 MsG0380017254.01.T01:CDS
GTATCACCAACATGTAACCT+AGG 0.546527 3:-94092101 None:intergenic
GAATGATGATGAGAAGGTGA+TGG 0.547160 3:+94092067 MsG0380017254.01.T01:CDS
GAGAGAAATTATGTCTTCCC+TGG 0.548632 3:+94092642 MsG0380017254.01.T01:CDS
CGAGCTGAGTCTCAATCCAA+TGG 0.549125 3:+94093158 MsG0380017254.01.T01:CDS
CCTTCAGAAGGTGACATCAC+AGG 0.549374 3:-94095750 None:intergenic
ACTGGAACCATAGGGAAAAG+AGG 0.549460 3:-94096227 None:intergenic
GTTCCTGTAAATCCAGGCCC+AGG 0.551731 3:-94095792 None:intergenic
CAGGGAGAATTAATCGGGAA+AGG 0.552192 3:+94092907 MsG0380017254.01.T01:CDS
AATGATGATGAGAAGGTGAT+GGG 0.553190 3:+94092068 MsG0380017254.01.T01:CDS
CATCTGCAACTCAAACTCCT+TGG 0.555622 3:-94096129 None:intergenic
AAATTGTAATCACACAACTA+AGG 0.556735 3:-94092014 None:intergenic
ATGCTTCCATTGAATCTACA+AGG 0.556972 3:+94093195 MsG0380017254.01.T01:CDS
GGCAAGTTGAACCTTTGAGA+TGG 0.559072 3:-94092188 None:intergenic
GCAGCTCACGTCAAGGTGAT+GGG 0.559402 3:+94093117 MsG0380017254.01.T01:CDS
ACATGTTGGTGATACAGAGA+AGG 0.562605 3:+94092109 MsG0380017254.01.T01:CDS
GGAATTAACCACTGATGCCC+AGG 0.563486 3:-94095729 None:intergenic
ATAAATGGCATGCTGCCATA+GGG 0.566491 3:-94095933 None:intergenic
CATGTTGGTGATACAGAGAA+GGG 0.566831 3:+94092110 MsG0380017254.01.T01:CDS
TTCAGTGCCACCGATAGCCT+CGG 0.569722 3:-94093264 None:intergenic
AGGGAGAATTAATCGGGAAA+GGG 0.569775 3:+94092908 MsG0380017254.01.T01:CDS
CACCTTGGCTTGTCTTACTG+AGG 0.570500 3:-94093051 None:intergenic
AATTTAGTATTCCATCTCAA+AGG 0.570635 3:+94092177 MsG0380017254.01.T01:CDS
CTGGTTCAACTGGAACCATA+GGG 0.571255 3:-94096235 None:intergenic
CCTGTGATGTCACCTTCTGA+AGG 0.573554 3:+94095750 MsG0380017254.01.T01:CDS
GGTTGACAGATCTTCTACCC+TGG 0.574513 3:-94093360 None:intergenic
ATCAGTCACCTGGGCATCAG+TGG 0.578191 3:+94095721 MsG0380017254.01.T01:CDS
GGAGGATCCATTCAAGTGTA+CGG 0.579509 3:+94096417 MsG0380017254.01.T01:three_prime_UTR
ACTAGTCCATCCGAGGCTAT+CGG 0.583914 3:+94093254 MsG0380017254.01.T01:CDS
AGTACTTGTATGTTTCTCAC+AGG 0.587055 3:+94096602 MsG0380017254.01.T01:three_prime_UTR
GAGAGGGAATGATGATGAGA+AGG 0.587504 3:+94092061 MsG0380017254.01.T01:CDS
TGGAATATGTTGTAAAACCT+CGG 0.589751 3:+94095502 MsG0380017254.01.T01:CDS
TATGGCTGCCGAAAATGGGA+TGG 0.595839 3:+94095683 MsG0380017254.01.T01:CDS
GAAACATACAAGTACTTAGG+AGG 0.596601 3:-94096595 None:intergenic
CCCGAAGGAGGAGCTCCGAA+GGG 0.597176 3:-94095834 None:intergenic
CACCTCAGTAAGACAAGCCA+AGG 0.598445 3:+94093049 MsG0380017254.01.T01:CDS
GAATATCATGATACTGGGAC+TGG 0.598737 3:+94093284 MsG0380017254.01.T01:CDS
ACAACTTGAACAGAGAAAGA+AGG 0.599965 3:+94092752 MsG0380017254.01.T01:CDS
TTCGGAGCTCCTCCTTCGGG+TGG 0.605026 3:+94095837 MsG0380017254.01.T01:CDS
CATAGGGAGGGAAGTAAGCA+TGG 0.605221 3:-94095917 None:intergenic
AAGTCGTCATTTATCTGAAG+GGG 0.607760 3:+94096016 MsG0380017254.01.T01:CDS
AAGGTGTGGAACTAGAAAAG+TGG 0.613409 3:-94095635 None:intergenic
ATGGCTGCCGAAAATGGGAT+GGG 0.616658 3:+94095684 MsG0380017254.01.T01:CDS
AAAGTCGTCATTTATCTGAA+GGG 0.617363 3:+94096015 MsG0380017254.01.T01:CDS
AGGTGACTGATTGAAACACC+AGG 0.618570 3:-94095709 None:intergenic
GGTGCCTCATAACCGAAGAT+CGG 0.618882 3:+94096310 MsG0380017254.01.T01:CDS
GGTGTTTCAATCAGTCACCT+GGG 0.619513 3:+94095712 MsG0380017254.01.T01:CDS
GGAGGTGGCATTCCATAGGA+AGG 0.620533 3:-94095873 None:intergenic
ATATTTCTCGTCAATCAGAA+GGG 0.621054 3:+94092706 MsG0380017254.01.T01:CDS
TATCACCAACATGTAACCTA+GGG 0.623081 3:-94092100 None:intergenic
ACTGGCAGTCCTATACATAG+TGG 0.623087 3:+94093302 MsG0380017254.01.T01:CDS
CTGTGATGTCACCTTCTGAA+GGG 0.623705 3:+94095751 MsG0380017254.01.T01:CDS
TTTACAGGAACAAATTATGG+AGG 0.624863 3:+94095804 MsG0380017254.01.T01:CDS
TTATTCCCTAGGTTACATGT+TGG 0.625229 3:+94092095 MsG0380017254.01.T01:CDS
CTACCTGGAGGAGTCTCCGG+TGG 0.626384 3:-94095894 None:intergenic
GCACTGAATATCATGATACT+GGG 0.627685 3:+94093279 MsG0380017254.01.T01:CDS
ACTACCTGGCTCGAAGACGA+CGG 0.629583 3:-94092236 None:intergenic
GCCACACGTGCAGAAAGTAC+AGG 0.629916 3:-94096449 None:intergenic
ATGACACAAGGAATGAGCAC+AGG 0.630925 3:+94096176 MsG0380017254.01.T01:CDS
AGCACAGGACAAGTTGCTGA+AGG 0.630951 3:+94096191 MsG0380017254.01.T01:CDS
TTGGTGATACAGAGAAGGGA+GGG 0.631275 3:+94092114 MsG0380017254.01.T01:CDS
GTGCCACCGATAGCCTCGGA+TGG 0.632897 3:-94093260 None:intergenic
TAGTCTATAAGCCATATCCT+GGG 0.633429 3:+94095775 MsG0380017254.01.T01:CDS
ATGGCATGCTGCCATAGGGA+GGG 0.634287 3:-94095929 None:intergenic
AATGGCATGCTGCCATAGGG+AGG 0.634987 3:-94095930 None:intergenic
CGTCATTTATCTGAAGGGGA+AGG 0.635430 3:+94096020 MsG0380017254.01.T01:CDS
TACCTGGCTCGAAGACGACG+GGG 0.638883 3:-94092234 None:intergenic
AAACTTAGCAGCTCACGTCA+AGG 0.639202 3:+94093110 MsG0380017254.01.T01:CDS
TGAAAACGTAAATCAAAACA+TGG 0.643766 3:+94095554 MsG0380017254.01.T01:CDS
TGGATTTCCAGCAAAAGGTG+TGG 0.646988 3:-94095649 None:intergenic
GAACAAATTATGGAGGATGT+GGG 0.647908 3:+94095811 MsG0380017254.01.T01:CDS
CCACTGTGCTGAAAGTAACA+AGG 0.650729 3:-94096515 None:intergenic
ATGAAAGTACCACCCGAAGG+AGG 0.651301 3:-94095846 None:intergenic
TTTCAGGAGTTAAATGACCA+GGG 0.652082 3:-94092659 None:intergenic
AAAGGGATCTAAACAATCTG+CGG 0.652139 3:+94092925 MsG0380017254.01.T01:CDS
TTTGCTGGAAATCCACACCA+TGG 0.653009 3:+94095657 MsG0380017254.01.T01:CDS
TATTTCTCGTCAATCAGAAG+GGG 0.655113 3:+94092707 MsG0380017254.01.T01:CDS
TGTTCTGCAGAGAATGCTGT+TGG 0.655449 3:+94095579 MsG0380017254.01.T01:CDS
ATGGTTCCAGTTGAACCAGA+GGG 0.662127 3:+94096239 MsG0380017254.01.T01:CDS
CAACATTTCAAAGATCTCCA+GGG 0.663807 3:+94093343 MsG0380017254.01.T01:CDS
TATGGTTCCAGTTGAACCAG+AGG 0.667512 3:+94096238 MsG0380017254.01.T01:CDS
TTATAGACTAGCCCTTCAGA+AGG 0.669816 3:-94095762 None:intergenic
AGTGCTGTTTATTCGCATGG+AGG 0.671256 3:+94096399 MsG0380017254.01.T01:exon
CCTTGTTACTTTCAGCACAG+TGG 0.672231 3:+94096515 MsG0380017254.01.T01:three_prime_UTR
ATGATGATGAGAAGGTGATG+GGG 0.672612 3:+94092069 MsG0380017254.01.T01:CDS
GTTGGTGATACAGAGAAGGG+AGG 0.680561 3:+94092113 MsG0380017254.01.T01:CDS
TTCATGAAAGTACCACCCGA+AGG 0.681895 3:-94095849 None:intergenic
AGTCCATCCGAGGCTATCGG+TGG 0.683945 3:+94093257 MsG0380017254.01.T01:CDS
AAACCAAACTAGTCCATCCG+AGG 0.689681 3:+94093247 MsG0380017254.01.T01:CDS
TGCTTCCATTGAATCTACAA+GGG 0.692849 3:+94093196 MsG0380017254.01.T01:CDS
ACCTGGCTCGAAGACGACGG+GGG 0.694887 3:-94092233 None:intergenic
ACAAACTCGAGTTATCAAAG+TGG 0.700487 3:+94096289 MsG0380017254.01.T01:CDS
AGTCCTAGTGAAATGACACA+AGG 0.702523 3:+94096164 MsG0380017254.01.T01:CDS
ACAGAGAAAGAAGGTTGACG+AGG 0.723789 3:+94092761 MsG0380017254.01.T01:CDS
GGTGACTGATTGAAACACCA+GGG 0.728640 3:-94095708 None:intergenic
AAGTAAGCATGGCTACCTGG+AGG 0.730950 3:-94095906 None:intergenic
TATGCATCGTCAGAGAACCA+AGG 0.745649 3:+94096112 MsG0380017254.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAGTAATGATAATAATT+AGG - Chr3:94092287-94092306 None:intergenic 10.0%
!!! TAATTATATTTTATTTAAGC+AGG + Chr3:94095380-94095399 MsG0380017254.01.T01:intron 10.0%
!! AACATTAAATACTCATTAAA+TGG - Chr3:94094601-94094620 None:intergenic 15.0%
!! AAGATAACATGATTAATATT+TGG - Chr3:94094903-94094922 None:intergenic 15.0%
!! AATAAAAAAACCAAATTAGA+AGG - Chr3:94094039-94094058 None:intergenic 15.0%
!! ACATTAAATACTCATTAAAT+GGG - Chr3:94094600-94094619 None:intergenic 15.0%
!! ATAAAAAAACCAAATTAGAA+GGG - Chr3:94094038-94094057 None:intergenic 15.0%
!! CAATCTAAATAAATATCATA+GGG - Chr3:94095036-94095055 None:intergenic 15.0%
!!! TTATATGAATGTTAGAATTT+TGG + Chr3:94093597-94093616 MsG0380017254.01.T01:intron 15.0%
!! ACAAACAAAAAAAAAATCGA+TGG - Chr3:94091784-94091803 None:intergenic 20.0%
!! CCAATCTAAATAAATATCAT+AGG - Chr3:94095037-94095056 None:intergenic 20.0%
!! CCTATGATATTTATTTAGAT+TGG + Chr3:94095034-94095053 MsG0380017254.01.T01:intron 20.0%
!! GTAGTTTGATGTTTATAAAT+TGG + Chr3:94095110-94095129 MsG0380017254.01.T01:intron 20.0%
!! TATCATAAAACATCTATTGA+GGG - Chr3:94094369-94094388 None:intergenic 20.0%
!! TTTAAATAGGAATCTTTGAA+AGG + Chr3:94093502-94093521 MsG0380017254.01.T01:intron 20.0%
!! TTTAAATTTCCACTATGTAT+AGG - Chr3:94093314-94093333 None:intergenic 20.0%
!!! AAAATGGAAAATAAAGCATT+TGG - Chr3:94095162-94095181 None:intergenic 20.0%
!!! AAAGTTTAGATTTTGTGAAT+TGG + Chr3:94091884-94091903 MsG0380017254.01.T01:five_prime_UTR 20.0%
!!! AAGTTTAGATTTTGTGAATT+GGG + Chr3:94091885-94091904 MsG0380017254.01.T01:five_prime_UTR 20.0%
!!! AATTTAAAATCCAAACAATC+AGG - Chr3:94092606-94092625 None:intergenic 20.0%
! AAATTGTAATCACACAACTA+AGG - Chr3:94092017-94092036 None:intergenic 25.0%
! AACAAAAAAAAAATCGATGG+AGG - Chr3:94091781-94091800 None:intergenic 25.0%
! AATTTAGTATTCCATCTCAA+AGG + Chr3:94092177-94092196 MsG0380017254.01.T01:CDS 25.0%
! AGAAAGATAGGAGAAAAATT+AGG - Chr3:94091684-94091703 None:intergenic 25.0%
! AGAAATAGCTTATTCATAAG+CGG + Chr3:94092481-94092500 MsG0380017254.01.T01:intron 25.0%
! ATAAGCTGTTTATCTTAACA+GGG + Chr3:94092519-94092538 MsG0380017254.01.T01:intron 25.0%
! ATTTGACATAAGGAAGATTA+AGG + Chr3:94092033-94092052 MsG0380017254.01.T01:five_prime_UTR 25.0%
! CATGGAATACCATTAAAATA+TGG - Chr3:94094833-94094852 None:intergenic 25.0%
! CTATCATAAAACATCTATTG+AGG - Chr3:94094370-94094389 None:intergenic 25.0%
! GAAAAGATTATAATGAGACT+CGG + Chr3:94094666-94094685 MsG0380017254.01.T01:intron 25.0%
! GAAAGATAGGAGAAAAATTA+GGG - Chr3:94091683-94091702 None:intergenic 25.0%
! GACAGACAATCAAAATAAAA+TGG - Chr3:94095178-94095197 None:intergenic 25.0%
! GGAACTAAAAAAGATAATGT+TGG - Chr3:94095141-94095160 None:intergenic 25.0%
! GGATAATTACATTTCAATCA+AGG + Chr3:94093965-94093984 MsG0380017254.01.T01:intron 25.0%
! TAATACTACAAACTTTAAGC+AGG + Chr3:94091820-94091839 MsG0380017254.01.T01:five_prime_UTR 25.0%
! TAATAGGTCAAAAACAATTC+TGG + Chr3:94093414-94093433 MsG0380017254.01.T01:CDS 25.0%
! TATAAGCTGTTTATCTTAAC+AGG + Chr3:94092518-94092537 MsG0380017254.01.T01:intron 25.0%
! TCAAATTGTAAGAGAAAGAT+AGG - Chr3:94091696-94091715 None:intergenic 25.0%
! TGAAAACGTAAATCAAAACA+TGG + Chr3:94095554-94095573 MsG0380017254.01.T01:CDS 25.0%
! TGTGATTACAATTTGACATA+AGG + Chr3:94092023-94092042 MsG0380017254.01.T01:five_prime_UTR 25.0%
!! AAGTCCTTACTAATGTTTTA+TGG + Chr3:94094075-94094094 MsG0380017254.01.T01:intron 25.0%
!! TAATGTTTTATGGTGAGTAA+TGG + Chr3:94094085-94094104 MsG0380017254.01.T01:intron 25.0%
!! TGCATAAAAGATGCTTTAAA+AGG - Chr3:94093916-94093935 None:intergenic 25.0%
!! TGTTTGGATTTTAAATTGCA+GGG + Chr3:94092609-94092628 MsG0380017254.01.T01:intron 25.0%
!! TGTTTTTCATTTAAAAGCAG+TGG + Chr3:94094644-94094663 MsG0380017254.01.T01:intron 25.0%
!! TTGTTTGGATTTTAAATTGC+AGG + Chr3:94092608-94092627 MsG0380017254.01.T01:intron 25.0%
!! TTTGATTATCCTTGTTATGA+TGG + Chr3:94093722-94093741 MsG0380017254.01.T01:intron 25.0%
!! TTTTTAATGTATTCCTGTCT+TGG + Chr3:94094204-94094223 MsG0380017254.01.T01:intron 25.0%
!! TTTTTCTTTTCCTGATTGTT+TGG + Chr3:94092593-94092612 MsG0380017254.01.T01:intron 25.0%
!!! AATTTTGGTTTTTTCAAAGC+AGG + Chr3:94092888-94092907 MsG0380017254.01.T01:CDS 25.0%
!!! AGCAAAATTACTACTTTTGA+TGG + Chr3:94093680-94093699 MsG0380017254.01.T01:intron 25.0%
!!! ATTTTGGTTTTTTCAAAGCA+GGG + Chr3:94092889-94092908 MsG0380017254.01.T01:CDS 25.0%
!!! GTTCTGCACTTTTTATTTTT+TGG + Chr3:94091931-94091950 MsG0380017254.01.T01:five_prime_UTR 25.0%
!!! TCTGTGTTTTGAAACATTTT+GGG + Chr3:94094427-94094446 MsG0380017254.01.T01:intron 25.0%
!!! TGCTATAAGCCATATTTTAA+TGG + Chr3:94094821-94094840 MsG0380017254.01.T01:intron 25.0%
!!! TTCTAGTTTTATGGTTGTTT+GGG + Chr3:94092560-94092579 MsG0380017254.01.T01:intron 25.0%
!!! TTCTGTGTTTTGAAACATTT+TGG + Chr3:94094426-94094445 MsG0380017254.01.T01:intron 25.0%
AAAGGAGATTTAATAGTCCT+GGG + Chr3:94094010-94094029 MsG0380017254.01.T01:intron 30.0%
AAAGTCGTCATTTATCTGAA+GGG + Chr3:94096015-94096034 MsG0380017254.01.T01:CDS 30.0%
AAATTAGGGATTAGAGAGAA+AGG - Chr3:94091669-94091688 None:intergenic 30.0%
AACAAGGATAATCAAATCAG+CGG - Chr3:94093718-94093737 None:intergenic 30.0%
AATATCATAGGGATCAAAAG+AGG - Chr3:94095025-94095044 None:intergenic 30.0%
AATTAGGGATTAGAGAGAAA+GGG - Chr3:94091668-94091687 None:intergenic 30.0%
AATTTACCTGTTCAGAGAAA+TGG + Chr3:94096074-94096093 MsG0380017254.01.T01:CDS 30.0%
AGAAAAATTGCACTATCAGA+AGG - Chr3:94093888-94093907 None:intergenic 30.0%
ATAGTTTGATTCACACTGTT+TGG + Chr3:94092339-94092358 MsG0380017254.01.T01:intron 30.0%
ATATCATAGGGATCAAAAGA+GGG - Chr3:94095024-94095043 None:intergenic 30.0%
ATATTTCTCGTCAATCAGAA+GGG + Chr3:94092706-94092725 MsG0380017254.01.T01:CDS 30.0%
ATCATTACAGACAGACATAA+CGG - Chr3:94095360-94095379 None:intergenic 30.0%
ATCTTTGAGCGAATATATAC+AGG - Chr3:94092801-94092820 None:intergenic 30.0%
ATTATTGCAACAACATCATC+AGG - Chr3:94093398-94093417 None:intergenic 30.0%
CATCAAACTACAAAAATCGA+AGG - Chr3:94095101-94095120 None:intergenic 30.0%
CATTAAATGGGAAGATTACT+AGG - Chr3:94094588-94094607 None:intergenic 30.0%
CTATTTCGTCAGTGAAAAAT+GGG + Chr3:94095610-94095629 MsG0380017254.01.T01:CDS 30.0%
CTCACCATAAAACATTAGTA+AGG - Chr3:94094082-94094101 None:intergenic 30.0%
CTCAGAGAGTTTAAACTTTA+AGG - Chr3:94094865-94094884 None:intergenic 30.0%
CTTAAAGTTTAAACTCTCTG+AGG + Chr3:94094863-94094882 MsG0380017254.01.T01:intron 30.0%
GAAAAATTGCACTATCAGAA+GGG - Chr3:94093887-94093906 None:intergenic 30.0%
GATGATGTTGTTGCAATAAT+AGG + Chr3:94093398-94093417 MsG0380017254.01.T01:CDS 30.0%
GCTTTAATATTATGCCATGT+TGG + Chr3:94094125-94094144 MsG0380017254.01.T01:intron 30.0%
GGATTTACAGGAACAAATTA+TGG + Chr3:94095801-94095820 MsG0380017254.01.T01:CDS 30.0%
GTATATATTCGCTCAAAGAT+TGG + Chr3:94092801-94092820 MsG0380017254.01.T01:CDS 30.0%
TACTAGGAATTAGGAGTAAA+AGG - Chr3:94094572-94094591 None:intergenic 30.0%
TAGTTTGATTCACACTGTTT+GGG + Chr3:94092340-94092359 MsG0380017254.01.T01:intron 30.0%
TATGTCTGGCATATCAAAAT+TGG + Chr3:94096546-94096565 MsG0380017254.01.T01:three_prime_UTR 30.0%
TATTAATTGCATGGAACTGA+AGG + Chr3:94093558-94093577 MsG0380017254.01.T01:intron 30.0%
TCTACAAAAACCGAGAAATT+CGG - Chr3:94091749-94091768 None:intergenic 30.0%
TCTATTTCGTCAGTGAAAAA+TGG + Chr3:94095609-94095628 MsG0380017254.01.T01:CDS 30.0%
TGAGAAACATACAAGTACTT+AGG - Chr3:94096601-94096620 None:intergenic 30.0%
TGGAATATGTTGTAAAACCT+CGG + Chr3:94095502-94095521 MsG0380017254.01.T01:CDS 30.0%
TGTGAACTCTATTAATTGCA+TGG + Chr3:94093549-94093568 MsG0380017254.01.T01:intron 30.0%
TTACCCTGTGAAACAAATTA+AGG - Chr3:94093636-94093655 None:intergenic 30.0%
TTCTCTCTTCTTGAATTGAT+TGG - Chr3:94096361-94096380 None:intergenic 30.0%
TTGTACTAGTAGTCCAAAAT+GGG + Chr3:94095319-94095338 MsG0380017254.01.T01:intron 30.0%
TTTACAGGAACAAATTATGG+AGG + Chr3:94095804-94095823 MsG0380017254.01.T01:CDS 30.0%
! AAATCTAAACTTTTCCCAAC+TGG - Chr3:94091877-94091896 None:intergenic 30.0%
! AACAGATTCTAAAAACTACC+TGG - Chr3:94092253-94092272 None:intergenic 30.0%
! AATCTAAACTTTTCCCAACT+GGG - Chr3:94091876-94091895 None:intergenic 30.0%
! ACTTTAAGGAAGAAAACTCA+TGG - Chr3:94094851-94094870 None:intergenic 30.0%
! ATCATCAGGAGAAATTTTCA+GGG - Chr3:94093384-94093403 None:intergenic 30.0%
! ATTAGAGAGAAAGGGTTTTT+AGG - Chr3:94091660-94091679 None:intergenic 30.0%
! CAAATTAAGGCTTCTGTTTT+TGG - Chr3:94093623-94093642 None:intergenic 30.0%
! GTTTGGATTTTAAATTGCAG+GGG + Chr3:94092610-94092629 MsG0380017254.01.T01:intron 30.0%
! TTAGAGAGAAAGGGTTTTTA+GGG - Chr3:94091659-94091678 None:intergenic 30.0%
! TTTGGATTTTAAATTGCAGG+GGG + Chr3:94092611-94092630 MsG0380017254.01.T01:intron 30.0%
!! AAAAGTCATGAGAGTTTTGA+TGG + Chr3:94092837-94092856 MsG0380017254.01.T01:CDS 30.0%
!! AAAGTCATGAGAGTTTTGAT+GGG + Chr3:94092838-94092857 MsG0380017254.01.T01:CDS 30.0%
!! AAGCCTTAATTTGTTTCACA+GGG + Chr3:94093630-94093649 MsG0380017254.01.T01:intron 30.0%
!! TAATTTGTTCCTGTAAATCC+AGG - Chr3:94095801-94095820 None:intergenic 30.0%
!!! ATGTTTTAATGATACCCAGT+TGG + Chr3:94091859-94091878 MsG0380017254.01.T01:five_prime_UTR 30.0%
!!! GTTCTAGTTTTATGGTTGTT+TGG + Chr3:94092559-94092578 MsG0380017254.01.T01:intron 30.0%
!!! TGTTTTAATGATACCCAGTT+GGG + Chr3:94091860-94091879 MsG0380017254.01.T01:five_prime_UTR 30.0%
AAAGGGATCTAAACAATCTG+CGG + Chr3:94092925-94092944 MsG0380017254.01.T01:CDS 35.0%
AAATCCACACCATGGAAATA+TGG + Chr3:94095665-94095684 MsG0380017254.01.T01:CDS 35.0%
AAATTTGCAAACCCAACCAT+AGG - Chr3:94093801-94093820 None:intergenic 35.0%
AACCAAGACACTACATAAGT+TGG - Chr3:94094406-94094425 None:intergenic 35.0%
AAGATTATAATGAGACTCGG+TGG + Chr3:94094669-94094688 MsG0380017254.01.T01:intron 35.0%
AAGTCGTCATTTATCTGAAG+GGG + Chr3:94096016-94096035 MsG0380017254.01.T01:CDS 35.0%
AATATTATGCCATGTTGGAG+TGG + Chr3:94094130-94094149 MsG0380017254.01.T01:intron 35.0%
ACAAACTCGAGTTATCAAAG+TGG + Chr3:94096289-94096308 MsG0380017254.01.T01:CDS 35.0%
ACAACATTTCAAAGATCTCC+AGG + Chr3:94093342-94093361 MsG0380017254.01.T01:CDS 35.0%
ACAACTTGAACAGAGAAAGA+AGG + Chr3:94092752-94092771 MsG0380017254.01.T01:CDS 35.0%
ACATCCCTGGTATTTAGTTA+AGG - Chr3:94093940-94093959 None:intergenic 35.0%
ACATGTAACCTAGGGAATAA+TGG - Chr3:94092095-94092114 None:intergenic 35.0%
ACCAAGACACTACATAAGTT+GGG - Chr3:94094405-94094424 None:intergenic 35.0%
ACTTTCATGAATCCTTCCTA+TGG + Chr3:94095861-94095880 MsG0380017254.01.T01:CDS 35.0%
AGAAATTCGGAGCAAAAAAG+GGG - Chr3:94091736-94091755 None:intergenic 35.0%
AGCAAAAAAGGGGTTATGAT+GGG - Chr3:94091726-94091745 None:intergenic 35.0%
AGTACTTGTATGTTTCTCAC+AGG + Chr3:94096602-94096621 MsG0380017254.01.T01:three_prime_UTR 35.0%
AGTTTCTTTGTCAGAGGATT+GGG - Chr3:94094771-94094790 None:intergenic 35.0%
ATGCTTCCATTGAATCTACA+AGG + Chr3:94093195-94093214 MsG0380017254.01.T01:CDS 35.0%
ATTGACGATATGAAATCTGC+AGG - Chr3:94094506-94094525 None:intergenic 35.0%
ATTGCGAGATACAACCAATA+AGG - Chr3:94094732-94094751 None:intergenic 35.0%
CAAAGTCGTCATTTATCTGA+AGG + Chr3:94096014-94096033 MsG0380017254.01.T01:CDS 35.0%
CAACATTTCAAAGATCTCCA+GGG + Chr3:94093343-94093362 MsG0380017254.01.T01:CDS 35.0%
CAATCAAGGAGTTGTATGTA+TGG + Chr3:94093979-94093998 MsG0380017254.01.T01:intron 35.0%
CATATTTCTCGTCAATCAGA+AGG + Chr3:94092705-94092724 MsG0380017254.01.T01:CDS 35.0%
CCAGATCTATTGTTTGAAGA+TGG + Chr3:94095426-94095445 MsG0380017254.01.T01:CDS 35.0%
CCATCTTCAAACAATAGATC+TGG - Chr3:94095429-94095448 None:intergenic 35.0%
CTTGTACTAGTAGTCCAAAA+TGG + Chr3:94095318-94095337 MsG0380017254.01.T01:intron 35.0%
GAAACATACAAGTACTTAGG+AGG - Chr3:94096598-94096617 None:intergenic 35.0%
GAAAGGAGATTTAATAGTCC+TGG + Chr3:94094009-94094028 MsG0380017254.01.T01:intron 35.0%
GAACAAATTATGGAGGATGT+GGG + Chr3:94095811-94095830 MsG0380017254.01.T01:CDS 35.0%
GAAGATTAAGGATGAAGAGA+GGG + Chr3:94092045-94092064 MsG0380017254.01.T01:exon 35.0%
GAGAAATTCGGAGCAAAAAA+GGG - Chr3:94091737-94091756 None:intergenic 35.0%
GCACTGAATATCATGATACT+GGG + Chr3:94093279-94093298 MsG0380017254.01.T01:CDS 35.0%
GCATCCTTAACTAAATACCA+GGG + Chr3:94093933-94093952 MsG0380017254.01.T01:intron 35.0%
GGAAATATACGAAAGAAGGT+AGG - Chr3:94093763-94093782 None:intergenic 35.0%
GGAAGACATAATTTCTCTCA+TGG - Chr3:94092641-94092660 None:intergenic 35.0%
GTAAATGTCTGCTCCTTATT+TGG - Chr3:94092993-94093012 None:intergenic 35.0%
GTAAGGAAAATTCCCTTAGA+GGG + Chr3:94093821-94093840 MsG0380017254.01.T01:intron 35.0%
GTTGGGTTTGCAAATTTGTA+AGG + Chr3:94093804-94093823 MsG0380017254.01.T01:intron 35.0%
TAGTCTATAAGCCATATCCT+GGG + Chr3:94095775-94095794 MsG0380017254.01.T01:CDS 35.0%
TATCACCAACATGTAACCTA+GGG - Chr3:94092103-94092122 None:intergenic 35.0%
TATTTCTCGTCAATCAGAAG+GGG + Chr3:94092707-94092726 MsG0380017254.01.T01:CDS 35.0%
TCAAAGCAGGGAGAATTAAT+CGG + Chr3:94092901-94092920 MsG0380017254.01.T01:CDS 35.0%
TCCACAAGTAAGTCCAAATA+AGG + Chr3:94092977-94092996 MsG0380017254.01.T01:CDS 35.0%
TGAGTTGCATAGACTGATAA+AGG + Chr3:94095268-94095287 MsG0380017254.01.T01:CDS 35.0%
TGCAGGAAATATACGAAAGA+AGG - Chr3:94093767-94093786 None:intergenic 35.0%
TGCATCCTTAACTAAATACC+AGG + Chr3:94093932-94093951 MsG0380017254.01.T01:intron 35.0%
TGCTTCCATTGAATCTACAA+GGG + Chr3:94093196-94093215 MsG0380017254.01.T01:CDS 35.0%
TGGGAAGATTACTAGGAATT+AGG - Chr3:94094581-94094600 None:intergenic 35.0%
TGTAAGGAAAATTCCCTTAG+AGG + Chr3:94093820-94093839 MsG0380017254.01.T01:intron 35.0%
TGTACTAGTAGTCCAAAATG+GGG + Chr3:94095320-94095339 MsG0380017254.01.T01:intron 35.0%
TTATTCCCTAGGTTACATGT+TGG + Chr3:94092095-94092114 MsG0380017254.01.T01:CDS 35.0%
TTATTTGGACTTACTTGTGG+AGG - Chr3:94092978-94092997 None:intergenic 35.0%
TTCTCCATTTGATGTATCTC+TGG - Chr3:94093021-94093040 None:intergenic 35.0%
TTGACGATATGAAATCTGCA+GGG - Chr3:94094505-94094524 None:intergenic 35.0%
TTGCGAGATACAACCAATAA+GGG - Chr3:94094731-94094750 None:intergenic 35.0%
TTTATCTTAACAGGGCCTTA+GGG + Chr3:94092527-94092546 MsG0380017254.01.T01:intron 35.0%
TTTCAGGAGTTAAATGACCA+GGG - Chr3:94092662-94092681 None:intergenic 35.0%
! AATGATGATGAGAAGGTGAT+GGG + Chr3:94092068-94092087 MsG0380017254.01.T01:CDS 35.0%
! ATCTTTCATTAGCCTATGGT+TGG + Chr3:94093786-94093805 MsG0380017254.01.T01:intron 35.0%
! CATCATCAGGAGAAATTTTC+AGG - Chr3:94093385-94093404 None:intergenic 35.0%
! TCCTTATTTGGACTTACTTG+TGG - Chr3:94092981-94093000 None:intergenic 35.0%
! TCCTTGTTATGATGGTTTGT+TGG + Chr3:94093730-94093749 MsG0380017254.01.T01:intron 35.0%
! TCTTTCATTAGCCTATGGTT+GGG + Chr3:94093787-94093806 MsG0380017254.01.T01:intron 35.0%
! TTGTTGCTTGTCAATAGCAT+CGG + Chr3:94093467-94093486 MsG0380017254.01.T01:intron 35.0%
! TTTGAAGATGGTGCTTTTCT+GGG + Chr3:94095438-94095457 MsG0380017254.01.T01:CDS 35.0%
!! AGTTTTAGTGTTCCCCTTAT+TGG + Chr3:94094715-94094734 MsG0380017254.01.T01:intron 35.0%
!! ATTCCTTGTGTCATTTCACT+AGG - Chr3:94096170-94096189 None:intergenic 35.0%
!! GAAGCCTTAATTTGTTTCAC+AGG + Chr3:94093629-94093648 MsG0380017254.01.T01:intron 35.0%
!! GACTAGTTTGGTTTGCTATA+GGG - Chr3:94093241-94093260 None:intergenic 35.0%
!! GTATGTATGGCTTTGAAGAA+AGG + Chr3:94093992-94094011 MsG0380017254.01.T01:intron 35.0%
!! TAGAGAGCCATTTTATTCCT+AGG - Chr3:94092152-94092171 None:intergenic 35.0%
!! TTACTTGGCAATTGCTTTTC+TGG - Chr3:94093444-94093463 None:intergenic 35.0%
!! TTTTTAGGAGTAGATCCATC+CGG - Chr3:94095474-94095493 None:intergenic 35.0%
!!! CTGTTGATTTTGAATCACCT+TGG - Chr3:94093069-94093088 None:intergenic 35.0%
!!! CTTTTTTGCTCCGAATTTCT+CGG + Chr3:94091736-94091755 MsG0380017254.01.T01:five_prime_UTR 35.0%
!!! GTGTGTGTGTTCTAGTTTTA+TGG + Chr3:94092551-94092570 MsG0380017254.01.T01:intron 35.0%
!!! TATGCAGGCTTTAGGAATTT+TGG + Chr3:94092873-94092892 MsG0380017254.01.T01:CDS 35.0%
!!! TATTCCAGTGCGAGTTTTTT+AGG - Chr3:94095489-94095508 None:intergenic 35.0%
AAGCTATCGTGAAGAGCTTA+CGG - Chr3:94092402-94092421 None:intergenic 40.0%
AAGGATCATCCTGCATAACT+TGG - Chr3:94094311-94094330 None:intergenic 40.0%
AAGGTGTGGAACTAGAAAAG+TGG - Chr3:94095638-94095657 None:intergenic 40.0%
AAGTAAGAGGAAACCAAGAC+AGG - Chr3:94094220-94094239 None:intergenic 40.0%
AAGTTATGCAGGATGATCCT+TGG + Chr3:94094310-94094329 MsG0380017254.01.T01:intron 40.0%
AATTATCCAACTCACATCCC+TGG - Chr3:94093953-94093972 None:intergenic 40.0%
AGCACCTCCTAGGAATAAAA+TGG + Chr3:94092142-94092161 MsG0380017254.01.T01:CDS 40.0%
AGGGAGAATTAATCGGGAAA+GGG + Chr3:94092908-94092927 MsG0380017254.01.T01:CDS 40.0%
AGTCCTAGTGAAATGACACA+AGG + Chr3:94096164-94096183 MsG0380017254.01.T01:CDS 40.0%
ATAAATGGCATGCTGCCATA+GGG - Chr3:94095936-94095955 None:intergenic 40.0%
ATGATCCTTGGATGTATGGT+AGG + Chr3:94094322-94094341 MsG0380017254.01.T01:intron 40.0%
ATTGAATCTACAAGGGAGAC+AGG + Chr3:94093203-94093222 MsG0380017254.01.T01:CDS 40.0%
ATTTACTGTCTTCTAGCGAC+TGG + Chr3:94094180-94094199 MsG0380017254.01.T01:intron 40.0%
CAAAGCAGGGAGAATTAATC+GGG + Chr3:94092902-94092921 MsG0380017254.01.T01:CDS 40.0%
CAGTGGTATGTAGATATGTC+TGG + Chr3:94096532-94096551 MsG0380017254.01.T01:three_prime_UTR 40.0%
CAGTTTCTTTGTCAGAGGAT+TGG - Chr3:94094772-94094791 None:intergenic 40.0%
CATAGGCTAATGAAAGATGC+AGG - Chr3:94093784-94093803 None:intergenic 40.0%
CCAAGACACTACATAAGTTG+GGG - Chr3:94094404-94094423 None:intergenic 40.0%
CCTACATTTCTTCCCTCTAA+GGG - Chr3:94093836-94093855 None:intergenic 40.0%
CGAGAAATTCGGAGCAAAAA+AGG - Chr3:94091738-94091757 None:intergenic 40.0%
CTAGTCTATAAGCCATATCC+TGG + Chr3:94095774-94095793 MsG0380017254.01.T01:CDS 40.0%
GAAATATGGCTGCCGAAAAT+GGG + Chr3:94095679-94095698 MsG0380017254.01.T01:CDS 40.0%
GAATATCATGATACTGGGAC+TGG + Chr3:94093284-94093303 MsG0380017254.01.T01:CDS 40.0%
GACAAGCAACAAGACTTACT+TGG - Chr3:94093459-94093478 None:intergenic 40.0%
GACGTGAGAAATGAGATTGA+TGG + Chr3:94092951-94092970 MsG0380017254.01.T01:CDS 40.0%
GAGAGAAATTATGTCTTCCC+TGG + Chr3:94092642-94092661 MsG0380017254.01.T01:CDS 40.0%
GAGCAAAAAAGGGGTTATGA+TGG - Chr3:94091727-94091746 None:intergenic 40.0%
GCCAACAAACCATCATAACA+AGG - Chr3:94093734-94093753 None:intergenic 40.0%
GGAACAAATTATGGAGGATG+TGG + Chr3:94095810-94095829 MsG0380017254.01.T01:CDS 40.0%
GGAAGATTAAGGATGAAGAG+AGG + Chr3:94092044-94092063 MsG0380017254.01.T01:exon 40.0%
GGTGAGTAATGGTTACAACA+GGG + Chr3:94094096-94094115 MsG0380017254.01.T01:intron 40.0%
GTAGCTCAGTCTATTGAAAC+AGG + Chr3:94096263-94096282 MsG0380017254.01.T01:CDS 40.0%
GTATCACCAACATGTAACCT+AGG - Chr3:94092104-94092123 None:intergenic 40.0%
GTCTATGCAACTCAAACACT+TGG - Chr3:94095262-94095281 None:intergenic 40.0%
GTTTATCTTAACAGGGCCTT+AGG + Chr3:94092526-94092545 MsG0380017254.01.T01:intron 40.0%
GTTTCAGGAGTTAAATGACC+AGG - Chr3:94092663-94092682 None:intergenic 40.0%
GTTTCTTTGTCAGAGGATTG+GGG - Chr3:94094770-94094789 None:intergenic 40.0%
TAAATACCAGGGATGTGAGT+TGG + Chr3:94093944-94093963 MsG0380017254.01.T01:intron 40.0%
TACTCCTAAAAAACTCGCAC+TGG + Chr3:94095482-94095501 MsG0380017254.01.T01:CDS 40.0%
TCCTACATTTCTTCCCTCTA+AGG - Chr3:94093837-94093856 None:intergenic 40.0%
TCTGCCAGAGATACATCAAA+TGG + Chr3:94093014-94093033 MsG0380017254.01.T01:CDS 40.0%
TGATCCTTGGATGTATGGTA+GGG + Chr3:94094323-94094342 MsG0380017254.01.T01:intron 40.0%
TGCGAGATACAACCAATAAG+GGG - Chr3:94094730-94094749 None:intergenic 40.0%
TGGAAAATAGCCTGTTGAAC+TGG + Chr3:94095054-94095073 MsG0380017254.01.T01:intron 40.0%
TGGTGAGTAATGGTTACAAC+AGG + Chr3:94094095-94094114 MsG0380017254.01.T01:intron 40.0%
TGTCTCCCTTGTAGATTCAA+TGG - Chr3:94093204-94093223 None:intergenic 40.0%
TGTCTTGGTTTCCTCTTACT+TGG + Chr3:94094219-94094238 MsG0380017254.01.T01:intron 40.0%
TTGCACAGTTTCTTTGTCAG+AGG - Chr3:94094777-94094796 None:intergenic 40.0%
! AAAAAGGGGTTATGATGGGA+AGG - Chr3:94091722-94091741 None:intergenic 40.0%
! ATGATGATGAGAAGGTGATG+GGG + Chr3:94092069-94092088 MsG0380017254.01.T01:CDS 40.0%
! CATGAGAACATTCCCCATTT+TGG - Chr3:94095335-94095354 None:intergenic 40.0%
! CTGCATCTTTCATTAGCCTA+TGG + Chr3:94093782-94093801 MsG0380017254.01.T01:intron 40.0%
! GAATGATGATGAGAAGGTGA+TGG + Chr3:94092067-94092086 MsG0380017254.01.T01:CDS 40.0%
! GGAATCTTTGAAAGGCAATC+TGG + Chr3:94093510-94093529 MsG0380017254.01.T01:intron 40.0%
! GGCACTGAATATCATGATAC+TGG + Chr3:94093278-94093297 MsG0380017254.01.T01:CDS 40.0%
! GTTTGAAGATGGTGCTTTTC+TGG + Chr3:94095437-94095456 MsG0380017254.01.T01:CDS 40.0%
! TTATAGACTAGCCCTTCAGA+AGG - Chr3:94095765-94095784 None:intergenic 40.0%
! TTCCTTACAGTCACGTTTTC+TGG - Chr3:94093860-94093879 None:intergenic 40.0%
!! ACATGTTGGTGATACAGAGA+AGG + Chr3:94092109-94092128 MsG0380017254.01.T01:CDS 40.0%
!! AGAGCCATTTTATTCCTAGG+AGG - Chr3:94092149-94092168 None:intergenic 40.0%
!! CATGTTGGTGATACAGAGAA+GGG + Chr3:94092110-94092129 MsG0380017254.01.T01:CDS 40.0%
!! GAAGCTGCTGCTTTCATAAA+TGG - Chr3:94095951-94095970 None:intergenic 40.0%
!! GGACTAGTTTGGTTTGCTAT+AGG - Chr3:94093242-94093261 None:intergenic 40.0%
!! TCTAGTGCTGTTTATTCGCA+TGG + Chr3:94096396-94096415 MsG0380017254.01.T01:exon 40.0%
!! TTTTCTGGGAAAGTCTCTTC+CGG + Chr3:94095452-94095471 MsG0380017254.01.T01:CDS 40.0%
AAACCAAACTAGTCCATCCG+AGG + Chr3:94093247-94093266 MsG0380017254.01.T01:CDS 45.0%
AAACTTAGCAGCTCACGTCA+AGG + Chr3:94093110-94093129 MsG0380017254.01.T01:CDS 45.0%
ACAGAGAAAGAAGGTTGACG+AGG + Chr3:94092761-94092780 MsG0380017254.01.T01:CDS 45.0%
ACCAAATTAGAAGGGATCCC+AGG - Chr3:94094030-94094049 None:intergenic 45.0%
ACTGGAACCATAGGGAAAAG+AGG - Chr3:94096230-94096249 None:intergenic 45.0%
ACTGGCAGTCCTATACATAG+TGG + Chr3:94093302-94093321 MsG0380017254.01.T01:CDS 45.0%
AGCTCACTTATGCAGGCTTT+AGG + Chr3:94092865-94092884 MsG0380017254.01.T01:CDS 45.0%
AGGTGACTGATTGAAACACC+AGG - Chr3:94095712-94095731 None:intergenic 45.0%
AGGTTGACGAGGATGACTTT+AGG + Chr3:94092772-94092791 MsG0380017254.01.T01:CDS 45.0%
ATCACGTTGTCCAGTTCCAT+TGG - Chr3:94093177-94093196 None:intergenic 45.0%
ATGACACAAGGAATGAGCAC+AGG + Chr3:94096176-94096195 MsG0380017254.01.T01:CDS 45.0%
ATGGTTCCAGTTGAACCAGA+GGG + Chr3:94096239-94096258 MsG0380017254.01.T01:CDS 45.0%
CAGATTCAGTTGCCGATCTT+CGG - Chr3:94096325-94096344 None:intergenic 45.0%
CAGGATGATCCTTGGATGTA+TGG + Chr3:94094318-94094337 MsG0380017254.01.T01:intron 45.0%
CAGGGAGAATTAATCGGGAA+AGG + Chr3:94092907-94092926 MsG0380017254.01.T01:CDS 45.0%
CATAAATGGCATGCTGCCAT+AGG - Chr3:94095937-94095956 None:intergenic 45.0%
CATCTGCAACTCAAACTCCT+TGG - Chr3:94096132-94096151 None:intergenic 45.0%
CCACTGTGCTGAAAGTAACA+AGG - Chr3:94096518-94096537 None:intergenic 45.0%
CCCCAACTTATGTAGTGTCT+TGG + Chr3:94094401-94094420 MsG0380017254.01.T01:intron 45.0%
CCCTTAGAGGGAAGAAATGT+AGG + Chr3:94093833-94093852 MsG0380017254.01.T01:intron 45.0%
CCTTCTTAGCTCAAGTCCTT+CGG - Chr3:94094285-94094304 None:intergenic 45.0%
CGAAGGACTTGAGCTAAGAA+GGG + Chr3:94094283-94094302 MsG0380017254.01.T01:intron 45.0%
CGTCATTTATCTGAAGGGGA+AGG + Chr3:94096020-94096039 MsG0380017254.01.T01:CDS 45.0%
CTAGACACCGTACACTTGAA+TGG - Chr3:94096427-94096446 None:intergenic 45.0%
CTGGTTCAACTGGAACCATA+GGG - Chr3:94096238-94096257 None:intergenic 45.0%
CTGTGATGTCACCTTCTGAA+GGG + Chr3:94095751-94095770 MsG0380017254.01.T01:CDS 45.0%
GAAGGACTTGAGCTAAGAAG+GGG + Chr3:94094284-94094303 MsG0380017254.01.T01:intron 45.0%
GAAGGATCTTCAATCACAGC+AGG - Chr3:94095083-94095102 None:intergenic 45.0%
GACATGGAGAACCAAGTAAG+AGG - Chr3:94094233-94094252 None:intergenic 45.0%
GACCAGAAAACGTGACTGTA+AGG + Chr3:94093855-94093874 MsG0380017254.01.T01:intron 45.0%
GAGTCTCAATCCAATGGAAC+TGG + Chr3:94093164-94093183 MsG0380017254.01.T01:CDS 45.0%
GGAAATATGGCTGCCGAAAA+TGG + Chr3:94095678-94095697 MsG0380017254.01.T01:CDS 45.0%
GGAGGATCCATTCAAGTGTA+CGG + Chr3:94096417-94096436 MsG0380017254.01.T01:three_prime_UTR 45.0%
GGGAAAAAGCTCACTTATGC+AGG + Chr3:94092858-94092877 MsG0380017254.01.T01:CDS 45.0%
GGTGACTGATTGAAACACCA+GGG - Chr3:94095711-94095730 None:intergenic 45.0%
GGTGTTTCAATCAGTCACCT+GGG + Chr3:94095712-94095731 MsG0380017254.01.T01:CDS 45.0%
GGTTGACGAGGATGACTTTA+GGG + Chr3:94092773-94092792 MsG0380017254.01.T01:CDS 45.0%
GTTGCTCCATTTCTCTGAAC+AGG - Chr3:94096083-94096102 None:intergenic 45.0%
TAGAACACACACACACCCTA+AGG - Chr3:94092545-94092564 None:intergenic 45.0%
TATGCATCGTCAGAGAACCA+AGG + Chr3:94096112-94096131 MsG0380017254.01.T01:CDS 45.0%
TATGGTTCCAGTTGAACCAG+AGG + Chr3:94096238-94096257 MsG0380017254.01.T01:CDS 45.0%
TCCTGAAACACTTACTCGTC+AGG + Chr3:94092674-94092693 MsG0380017254.01.T01:CDS 45.0%
TCCTGGGATCCCTTCTAATT+TGG + Chr3:94094026-94094045 MsG0380017254.01.T01:intron 45.0%
TGACACACTGTAGCTAGTTG+AGG + Chr3:94094477-94094496 MsG0380017254.01.T01:intron 45.0%
TGAGATGATCTGCTGTCACA+AGG - Chr3:94094158-94094177 None:intergenic 45.0%
TGGATTTCCAGCAAAAGGTG+TGG - Chr3:94095652-94095671 None:intergenic 45.0%
TGGTGTGGATTTCCAGCAAA+AGG - Chr3:94095657-94095676 None:intergenic 45.0%
TGGTGTTTCAATCAGTCACC+TGG + Chr3:94095711-94095730 MsG0380017254.01.T01:CDS 45.0%
TGTTCTGCAGAGAATGCTGT+TGG + Chr3:94095579-94095598 MsG0380017254.01.T01:CDS 45.0%
TTTCGGCAGCCATATTTCCA+TGG - Chr3:94095677-94095696 None:intergenic 45.0%
TTTGCTGGAAATCCACACCA+TGG + Chr3:94095657-94095676 MsG0380017254.01.T01:CDS 45.0%
! ACTCTCTGTTGACTGTAGAG+AGG - Chr3:94095230-94095249 None:intergenic 45.0%
! CGCTTAAGATTTTGTAGCCG+AGG - Chr3:94095522-94095541 None:intergenic 45.0%
! GAGAGGGAATGATGATGAGA+AGG + Chr3:94092061-94092080 MsG0380017254.01.T01:CDS 45.0%
! GGCAAGTTGAACCTTTGAGA+TGG - Chr3:94092191-94092210 None:intergenic 45.0%
! TCTGGTTCAACTGGAACCAT+AGG - Chr3:94096239-94096258 None:intergenic 45.0%
! TGCACTTCCTCTTTTCCCTA+TGG + Chr3:94096220-94096239 MsG0380017254.01.T01:CDS 45.0%
! TTGGTGATACAGAGAAGGGA+GGG + Chr3:94092114-94092133 MsG0380017254.01.T01:CDS 45.0%
!! AGTGCTGTTTATTCGCATGG+AGG + Chr3:94096399-94096418 MsG0380017254.01.T01:exon 45.0%
!! CCTTGTTACTTTCAGCACAG+TGG + Chr3:94096515-94096534 MsG0380017254.01.T01:three_prime_UTR 45.0%
!! TCTAGTTCCACACCTTTTGC+TGG + Chr3:94095642-94095661 MsG0380017254.01.T01:CDS 45.0%
!! TTATTCCTAGGAGGTGCTCT+TGG - Chr3:94092140-94092159 None:intergenic 45.0%
!! TTCATGAAAGTACCACCCGA+AGG - Chr3:94095852-94095871 None:intergenic 45.0%
!!! GTTATTTTATAATTTTAAAT+AGG + Chr3:94093489-94093508 MsG0380017254.01.T01:intron 5.0%
AAGTAAGCATGGCTACCTGG+AGG - Chr3:94095909-94095928 None:intergenic 50.0%
ACGACGGGGGAACTGTATTT+GGG - Chr3:94092223-94092242 None:intergenic 50.0%
ACTAGTCCATCCGAGGCTAT+CGG + Chr3:94093254-94093273 MsG0380017254.01.T01:CDS 50.0%
AGAAGGGGACCAAGTTATGC+AGG + Chr3:94094299-94094318 MsG0380017254.01.T01:intron 50.0%
AGCACAGGACAAGTTGCTGA+AGG + Chr3:94096191-94096210 MsG0380017254.01.T01:CDS 50.0%
ATAGACTGAGCTACTCCCTC+TGG - Chr3:94096257-94096276 None:intergenic 50.0%
ATGGCTGCCGAAAATGGGAT+GGG + Chr3:94095684-94095703 MsG0380017254.01.T01:CDS 50.0%
CACAAGGATCCACTCCAACA+TGG - Chr3:94094142-94094161 None:intergenic 50.0%
CACCTCAGTAAGACAAGCCA+AGG + Chr3:94093049-94093068 MsG0380017254.01.T01:CDS 50.0%
CAGCAGGTAACCAGTTCAAC+AGG - Chr3:94095067-94095086 None:intergenic 50.0%
CAGGTCCAACAACTGATTGC+TGG + Chr3:94095399-94095418 MsG0380017254.01.T01:intron 50.0%
CATAGGGAGGGAAGTAAGCA+TGG - Chr3:94095920-94095939 None:intergenic 50.0%
CATGCTTACTTCCCTCCCTA+TGG + Chr3:94095918-94095937 MsG0380017254.01.T01:CDS 50.0%
CCGAAGGACTTGAGCTAAGA+AGG + Chr3:94094282-94094301 MsG0380017254.01.T01:intron 50.0%
CCTGTGATGTCACCTTCTGA+AGG + Chr3:94095750-94095769 MsG0380017254.01.T01:CDS 50.0%
CCTTCAGAAGGTGACATCAC+AGG - Chr3:94095753-94095772 None:intergenic 50.0%
CGAGCTGAGTCTCAATCCAA+TGG + Chr3:94093158-94093177 MsG0380017254.01.T01:CDS 50.0%
GCAGCCATATTTCCATGGTG+TGG - Chr3:94095672-94095691 None:intergenic 50.0%
GCCTGACGAGTAAGTGTTTC+AGG - Chr3:94092678-94092697 None:intergenic 50.0%
GCGATCCAGCAATCAGTTGT+TGG - Chr3:94095407-94095426 None:intergenic 50.0%
GGAACTGTATTTGGGTGGTG+GGG - Chr3:94092215-94092234 None:intergenic 50.0%
GGAATTAACCACTGATGCCC+AGG - Chr3:94095732-94095751 None:intergenic 50.0%
GGATGTATGGTAGGGACACT+TGG + Chr3:94094331-94094350 MsG0380017254.01.T01:intron 50.0%
GGGAACTGTATTTGGGTGGT+GGG - Chr3:94092216-94092235 None:intergenic 50.0%
GGTGCCTCATAACCGAAGAT+CGG + Chr3:94096310-94096329 MsG0380017254.01.T01:CDS 50.0%
GGTTGACAGATCTTCTACCC+TGG - Chr3:94093363-94093382 None:intergenic 50.0%
GTAAATCCAGGCCCAGGATA+TGG - Chr3:94095789-94095808 None:intergenic 50.0%
GTGTCCCTACCATACATCCA+AGG - Chr3:94094330-94094349 None:intergenic 50.0%
GTTGCCGATCTTCGGTTATG+AGG - Chr3:94096317-94096336 None:intergenic 50.0%
GTTTCCTTTCACTGCACCGA+AGG + Chr3:94094266-94094285 MsG0380017254.01.T01:intron 50.0%
TATAAGCCATATCCTGGGCC+TGG + Chr3:94095780-94095799 MsG0380017254.01.T01:CDS 50.0%
TATCCTGGGCCTGGATTTAC+AGG + Chr3:94095789-94095808 MsG0380017254.01.T01:CDS 50.0%
TATGGCTGCCGAAAATGGGA+TGG + Chr3:94095683-94095702 MsG0380017254.01.T01:CDS 50.0%
TCCTGTACTTTCTGCACGTG+TGG + Chr3:94096448-94096467 MsG0380017254.01.T01:three_prime_UTR 50.0%
TGAAAGGAAACATGCCCCAG+TGG - Chr3:94094257-94094276 None:intergenic 50.0%
TGATGGGGCCATTATTCCCT+AGG + Chr3:94092084-94092103 MsG0380017254.01.T01:CDS 50.0%
TGGTTCTCCATGTCACCACT+GGG + Chr3:94094239-94094258 MsG0380017254.01.T01:intron 50.0%
! AAGTCCTTCGGTGCAGTGAA+AGG - Chr3:94094273-94094292 None:intergenic 50.0%
! TTGGTTCTCCATGTCACCAC+TGG + Chr3:94094238-94094257 MsG0380017254.01.T01:intron 50.0%
!! ATGAAAGTACCACCCGAAGG+AGG - Chr3:94095849-94095868 None:intergenic 50.0%
!! CACCTTGGCTTGTCTTACTG+AGG - Chr3:94093054-94093073 None:intergenic 50.0%
!! GTTGGTGATACAGAGAAGGG+AGG + Chr3:94092113-94092132 MsG0380017254.01.T01:CDS 50.0%
!! TAGCCTCGGATGGACTAGTT+TGG - Chr3:94093253-94093272 None:intergenic 50.0%
AACATGCCCCAGTGGTGACA+TGG - Chr3:94094249-94094268 None:intergenic 55.0%
AATGGCATGCTGCCATAGGG+AGG - Chr3:94095933-94095952 None:intergenic 55.0%
ACGGGGGAACTGTATTTGGG+TGG - Chr3:94092220-94092239 None:intergenic 55.0%
AGCAGCTCACGTCAAGGTGA+TGG + Chr3:94093116-94093135 MsG0380017254.01.T01:CDS 55.0%
ATCAGTCACCTGGGCATCAG+TGG + Chr3:94095721-94095740 MsG0380017254.01.T01:CDS 55.0%
ATGGCATGCTGCCATAGGGA+GGG - Chr3:94095932-94095951 None:intergenic 55.0%
CTATGGAATGCCACCTCCAC+CGG + Chr3:94095878-94095897 MsG0380017254.01.T01:CDS 55.0%
CTGGGAAAGTCTCTTCCGGA+TGG + Chr3:94095456-94095475 MsG0380017254.01.T01:CDS 55.0%
GACGACGGGGGAACTGTATT+TGG - Chr3:94092224-94092243 None:intergenic 55.0%
GCACGTGTGGCATCGTGTAA+CGG + Chr3:94096461-94096480 MsG0380017254.01.T01:three_prime_UTR 55.0%
GCAGCTCACGTCAAGGTGAT+GGG + Chr3:94093117-94093136 MsG0380017254.01.T01:CDS 55.0%
GGAGGTGGCATTCCATAGGA+AGG - Chr3:94095876-94095895 None:intergenic 55.0%
GGGAAGTAAGCATGGCTACC+TGG - Chr3:94095912-94095931 None:intergenic 55.0%
GGGGAACTGTATTTGGGTGG+TGG - Chr3:94092217-94092236 None:intergenic 55.0%
GGTTCTCCATGTCACCACTG+GGG + Chr3:94094240-94094259 MsG0380017254.01.T01:intron 55.0%
GTTCCTGTAAATCCAGGCCC+AGG - Chr3:94095795-94095814 None:intergenic 55.0%
TATGGAGGATGTGGGCCCTT+CGG + Chr3:94095819-94095838 MsG0380017254.01.T01:CDS 55.0%
TTCAGTGCCACCGATAGCCT+CGG - Chr3:94093267-94093286 None:intergenic 55.0%
TTTGCACGCGTGCAGAGAAC+TGG - Chr3:94095998-94096017 None:intergenic 55.0%
! ACTACCTGGCTCGAAGACGA+CGG - Chr3:94092239-94092258 None:intergenic 55.0%
! CCAGGGACCCATCCCATTTT+CGG - Chr3:94095694-94095713 None:intergenic 55.0%
! GCCACACGTGCAGAAAGTAC+AGG - Chr3:94096452-94096471 None:intergenic 55.0%
! GCTACTCCCTCTGGTTCAAC+TGG - Chr3:94096248-94096267 None:intergenic 55.0%
!! ACTGTATTTGGGTGGTGGGG+TGG - Chr3:94092212-94092231 None:intergenic 55.0%
AGTCCATCCGAGGCTATCGG+TGG + Chr3:94093257-94093276 MsG0380017254.01.T01:CDS 60.0%
CCGAAAATGGGATGGGTCCC+TGG + Chr3:94095691-94095710 MsG0380017254.01.T01:CDS 60.0%
CGGTGGAGGTGGCATTCCAT+AGG - Chr3:94095880-94095899 None:intergenic 60.0%
TGGCTACCTGGAGGAGTCTC+CGG - Chr3:94095900-94095919 None:intergenic 60.0%
! CTACCTGGCTCGAAGACGAC+GGG - Chr3:94092238-94092257 None:intergenic 60.0%
! TACCTGGCTCGAAGACGACG+GGG - Chr3:94092237-94092256 None:intergenic 60.0%
ACCCGAAGGAGGAGCTCCGA+AGG - Chr3:94095838-94095857 None:intergenic 65.0%
CCCGAAGGAGGAGCTCCGAA+GGG - Chr3:94095837-94095856 None:intergenic 65.0%
CCCTTCGGAGCTCCTCCTTC+GGG + Chr3:94095834-94095853 MsG0380017254.01.T01:CDS 65.0%
CTACCTGGAGGAGTCTCCGG+TGG - Chr3:94095897-94095916 None:intergenic 65.0%
GCCCTTCGGAGCTCCTCCTT+CGG + Chr3:94095833-94095852 MsG0380017254.01.T01:CDS 65.0%
GTGCCACCGATAGCCTCGGA+TGG - Chr3:94093263-94093282 None:intergenic 65.0%
TTCGGAGCTCCTCCTTCGGG+TGG + Chr3:94095837-94095856 MsG0380017254.01.T01:CDS 65.0%
! ACCTGGCTCGAAGACGACGG+GGG - Chr3:94092236-94092255 None:intergenic 65.0%
!! GAGGGCCAAGAGCACCTCCT+AGG + Chr3:94092132-94092151 MsG0380017254.01.T01:CDS 65.0%
CCTCCACCGGAGACTCCTCC+AGG + Chr3:94095891-94095910 MsG0380017254.01.T01:CDS 70.0%
CCTGGAGGAGTCTCCGGTGG+AGG - Chr3:94095894-94095913 None:intergenic 70.0%
GGAGGAGTCTCCGGTGGAGG+TGG - Chr3:94095891-94095910 None:intergenic 70.0%
TCCCCCGTCGTCTTCGAGCC+AGG + Chr3:94092232-94092251 MsG0380017254.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 94091636 94096633 94091636 ID=MsG0380017254.01;Name=MsG0380017254.01
Chr3 mRNA 94091636 94096633 94091636 ID=MsG0380017254.01.T01;Parent=MsG0380017254.01;Name=MsG0380017254.01.T01;_AED=0.24;_eAED=0.24;_QI=420|1|1|1|1|1|4|233|692
Chr3 exon 94091636 94092253 94091636 ID=MsG0380017254.01.T01:exon:26884;Parent=MsG0380017254.01.T01
Chr3 exon 94092630 94093459 94092630 ID=MsG0380017254.01.T01:exon:26885;Parent=MsG0380017254.01.T01
Chr3 exon 94095238 94095289 94095238 ID=MsG0380017254.01.T01:exon:26886;Parent=MsG0380017254.01.T01
Chr3 exon 94095402 94096633 94095402 ID=MsG0380017254.01.T01:exon:26887;Parent=MsG0380017254.01.T01
Chr3 five_prime_UTR 94091636 94092055 94091636 ID=MsG0380017254.01.T01:five_prime_utr;Parent=MsG0380017254.01.T01
Chr3 CDS 94092056 94092253 94092056 ID=MsG0380017254.01.T01:cds;Parent=MsG0380017254.01.T01
Chr3 CDS 94092630 94093459 94092630 ID=MsG0380017254.01.T01:cds;Parent=MsG0380017254.01.T01
Chr3 CDS 94095238 94095289 94095238 ID=MsG0380017254.01.T01:cds;Parent=MsG0380017254.01.T01
Chr3 CDS 94095402 94096400 94095402 ID=MsG0380017254.01.T01:cds;Parent=MsG0380017254.01.T01
Chr3 three_prime_UTR 94096401 94096633 94096401 ID=MsG0380017254.01.T01:three_prime_utr;Parent=MsG0380017254.01.T01
Gene Sequence

>MsG0380017254.01.T01

ATGAAGAGAGGGAATGATGATGAGAAGGTGATGGGGCCATTATTCCCTAGGTTACATGTTGGTGATACAGAGAAGGGAGGGCCAAGAGCACCTCCTAGGAATAAAATGGCTCTCTATGAGCAATTTAGTATTCCATCTCAAAGGTTCAACTTGCCACCCCACCACCCAAATACAGTTCCCCCGTCGTCTTCGAGCCAGGGGGCTGTCCATGAGAGAAATTATGTCTTCCCTGGTCATTTAACTCCTGAAACACTTACTCGTCAGGCTGAGAAACATATTTCTCGTCAATCAGAAGGGGAAAATTTGAATGCTTCTCTGTCACAACTTGAACAGAGAAAGAAGGTTGACGAGGATGACTTTAGGGTTCCTGTATATATTCGCTCAAAGATTGGTCAATCTAATGATAAAAGTCATGAGAGTTTTGATGGGAAAAAGCTCACTTATGCAGGCTTTAGGAATTTTGGTTTTTTCAAAGCAGGGAGAATTAATCGGGAAAGGGATCTAAACAATCTGCGGACAGACGTGAGAAATGAGATTGATGGTCCTCCACAAGTAAGTCCAAATAAGGAGCAGACATTTACTTCTGCCAGAGATACATCAAATGGAGAAAGTATTGACACCTCAGTAAGACAAGCCAAGGTGATTCAAAATCAACAGTTTCAAGATCGTGCTGTGTTCAAACTTAGCAGCTCACGTCAAGGTGATGGGTGCTTACGTCAAGACTGTCGAGCTGAGTCTCAATCCAATGGAACTGGACAACGTGATGCTTCCATTGAATCTACAAGGGAGACAGGCAAGAGTAATGACCCTATAGCAAACCAAACTAGTCCATCCGAGGCTATCGGTGGCACTGAATATCATGATACTGGGACTGGCAGTCCTATACATAGTGGAAATTTAAACAAAAATGACAACATTTCAAAGATCTCCAGGGTAGAAGATCTGTCAACCCTGAAAATTTCTCCTGATGATGTTGTTGCAATAATAGGTCAAAAACAATTCTGGAAAGCCAGAAAAGCAATTGCCAATCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAGTTGCATAGACTGATAAAGGTCCAACAACTGATTGCTGGATCGCCAGATCTATTGTTTGAAGATGGTGCTTTTCTGGGAAAGTCTCTTCCGGATGGATCTACTCCTAAAAAACTCGCACTGGAATATGTTGTAAAACCTCGGCTACAAAATCTTAAGCGCAAAGTTGATTCTGAAAACGTAAATCAAAACATGGAATGTTCTGCAGAGAATGCTGTTGGTAAAACATCTATTTCGTCAGTGAAAAATGGGAGCCACTTTTCTAGTTCCACACCTTTTGCTGGAAATCCACACCATGGAAATATGGCTGCCGAAAATGGGATGGGTCCCTGGTGTTTCAATCAGTCACCTGGGCATCAGTGGTTAATTCCTGTGATGTCACCTTCTGAAGGGCTAGTCTATAAGCCATATCCTGGGCCTGGATTTACAGGAACAAATTATGGAGGATGTGGGCCCTTCGGAGCTCCTCCTTCGGGTGGTACTTTCATGAATCCTTCCTATGGAATGCCACCTCCACCGGAGACTCCTCCAGGTAGCCATGCTTACTTCCCTCCCTATGGCAGCATGCCATTTATGAAAGCAGCAGCTTCAGAGTCAGCAGTCGAACATGTGAACCAGTTCTCTGCACGCGTGCAAAGTCGTCATTTATCTGAAGGGGAAGGCGATTGTAACAAACATAATCAAAGCTCATGCAATTTACCTGTTCAGAGAAATGGAGCAACAACGCATGTTATGCATCGTCAGAGAACCAAGGAGTTTGAGTTGCAGATGAGTACAGCAAGTAGTCCTAGTGAAATGACACAAGGAATGAGCACAGGACAAGTTGCTGAAGGAAGAGATGCACTTCCTCTTTTCCCTATGGTTCCAGTTGAACCAGAGGGAGTAGCTCAGTCTATTGAAACAGGACAACAAACTCGAGTTATCAAAGTGGTGCCTCATAACCGAAGATCGGCAACTGAATCTGCAGCTAGAATTTTCCAATCAATTCAAGAAGAGAGAAAACAATATGACACACTCTAG
Protein sequence

>MsG0380017254.01.T01

MKRGNDDEKVMGPLFPRLHVGDTEKGGPRAPPRNKMALYEQFSIPSQRFNLPPHHPNTVPPSSSSQGAVHERNYVFPGHLTPETLTRQAEKHISRQSEGENLNASLSQLEQRKKVDEDDFRVPVYIRSKIGQSNDKSHESFDGKKLTYAGFRNFGFFKAGRINRERDLNNLRTDVRNEIDGPPQVSPNKEQTFTSARDTSNGESIDTSVRQAKVIQNQQFQDRAVFKLSSSRQGDGCLRQDCRAESQSNGTGQRDASIESTRETGKSNDPIANQTSPSEAIGGTEYHDTGTGSPIHSGNLNKNDNISKISRVEDLSTLKISPDDVVAIIGQKQFWKARKAIANQQRVFAVQVFELHRLIKVQQLIAGSPDLLFEDGAFLGKSLPDGSTPKKLALEYVVKPRLQNLKRKVDSENVNQNMECSAENAVGKTSISSVKNGSHFSSSTPFAGNPHHGNMAAENGMGPWCFNQSPGHQWLIPVMSPSEGLVYKPYPGPGFTGTNYGGCGPFGAPPSGGTFMNPSYGMPPPPETPPGSHAYFPPYGSMPFMKAAASESAVEHVNQFSARVQSRHLSEGEGDCNKHNQSSCNLPVQRNGATTHVMHRQRTKEFELQMSTASSPSEMTQGMSTGQVAEGRDALPLFPMVPVEPEGVAQSIETGQQTRVIKVVPHNRRSATESAARIFQSIQEERKQYDTL*