Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041072.01.T01 | XP_013450083.1 | 94.776 | 268 | 8 | 1 | 1 | 268 | 1 | 262 | 0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041072.01.T01 | I3T4K4 | 94.776 | 268 | 8 | 1 | 1 | 268 | 1 | 262 | 0.0 | 512 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049058.01 | MsG0780041072.01 | 0.832677 | 8.249125e-56 | 9.286061e-53 |
| MsG0180003281.01 | MsG0780041072.01 | 0.802242 | 6.155621e-49 | 3.000347e-46 |
| MsG0180003455.01 | MsG0780041072.01 | 0.814765 | 1.304290e-51 | 8.828675e-49 |
| MsG0180004114.01 | MsG0780041072.01 | 0.805004 | 1.645564e-49 | 8.609297e-47 |
| MsG0180004970.01 | MsG0780041072.01 | 0.801144 | 1.034124e-48 | 4.902273e-46 |
| MsG0780040669.01 | MsG0780041072.01 | 0.813108 | 3.023727e-51 | 1.956821e-48 |
| MsG0780041072.01 | MsG0880043299.01 | 0.843648 | 1.231145e-58 | 1.939223e-55 |
| MsG0780041072.01 | MsG0880046012.01 | 0.813966 | 1.958679e-51 | 1.297546e-48 |
| MsG0280010779.01 | MsG0780041072.01 | 0.800648 | 1.305696e-48 | 6.112325e-46 |
| MsG0480023130.01 | MsG0780041072.01 | 0.821843 | 3.254790e-53 | 2.678497e-50 |
| MsG0380015677.01 | MsG0780041072.01 | 0.803164 | 3.973333e-49 | 1.982699e-46 |
| MsG0380016994.01 | MsG0780041072.01 | 0.802299 | 5.991462e-49 | 2.924715e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041072.01.T01 | MTR_7g103560 | 94.776 | 268 | 8 | 1 | 1 | 268 | 1 | 262 | 0.0 | 512 |
| MsG0780041072.01.T01 | MTR_7g103570 | 82.540 | 252 | 43 | 1 | 13 | 264 | 1 | 251 | 1.60e-152 | 426 |
| MsG0780041072.01.T01 | MTR_7g103570 | 83.425 | 181 | 30 | 0 | 13 | 193 | 1 | 181 | 2.41e-109 | 315 |
| MsG0780041072.01.T01 | MTR_7g103410 | 61.450 | 262 | 77 | 5 | 1 | 260 | 1 | 240 | 3.17e-102 | 298 |
| MsG0780041072.01.T01 | MTR_7g015170 | 40.000 | 235 | 128 | 4 | 39 | 266 | 32 | 260 | 1.94e-56 | 182 |
| MsG0780041072.01.T01 | MTR_7g015130 | 39.167 | 240 | 138 | 3 | 33 | 265 | 28 | 266 | 1.78e-55 | 180 |
| MsG0780041072.01.T01 | MTR_7g015150 | 41.121 | 214 | 115 | 3 | 52 | 260 | 70 | 277 | 3.78e-55 | 180 |
| MsG0780041072.01.T01 | MTR_7g015180 | 39.732 | 224 | 124 | 4 | 48 | 266 | 49 | 266 | 2.35e-53 | 174 |
| MsG0780041072.01.T01 | MTR_7g015130 | 39.910 | 223 | 124 | 4 | 51 | 265 | 11 | 231 | 7.96e-53 | 172 |
| MsG0780041072.01.T01 | MTR_2g060670 | 39.381 | 226 | 129 | 3 | 48 | 268 | 492 | 714 | 4.12e-49 | 172 |
| MsG0780041072.01.T01 | MTR_7g015190 | 36.905 | 252 | 145 | 5 | 18 | 264 | 61 | 303 | 1.50e-47 | 160 |
| MsG0780041072.01.T01 | MTR_7g015190 | 38.136 | 236 | 132 | 5 | 34 | 264 | 111 | 337 | 6.31e-46 | 157 |
| MsG0780041072.01.T01 | MTR_7g015130 | 39.896 | 193 | 108 | 3 | 33 | 218 | 28 | 219 | 1.31e-42 | 145 |
| MsG0780041072.01.T01 | MTR_7g015130 | 40.212 | 189 | 105 | 3 | 33 | 214 | 28 | 215 | 2.08e-42 | 144 |
| MsG0780041072.01.T01 | MTR_7g015190 | 32.463 | 268 | 151 | 7 | 18 | 264 | 61 | 319 | 1.14e-36 | 132 |
| MsG0780041072.01.T01 | MTR_7g015190 | 32.342 | 269 | 151 | 8 | 18 | 264 | 61 | 320 | 2.43e-36 | 132 |
| MsG0780041072.01.T01 | MTR_2g060670 | 41.509 | 159 | 85 | 3 | 48 | 201 | 492 | 647 | 1.31e-34 | 132 |
| MsG0780041072.01.T01 | MTR_7g103550 | 82.927 | 41 | 7 | 0 | 215 | 255 | 6 | 46 | 1.17e-19 | 80.5 |
| MsG0780041072.01.T01 | MTR_7g103540 | 65.957 | 47 | 16 | 0 | 214 | 260 | 67 | 113 | 1.12e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041072.01.T01 | AT2G36540 | 48.077 | 260 | 112 | 6 | 14 | 265 | 5 | 249 | 1.33e-64 | 202 |
| MsG0780041072.01.T01 | AT3G29760 | 41.000 | 200 | 108 | 3 | 66 | 260 | 321 | 515 | 3.43e-45 | 159 |
| MsG0780041072.01.T01 | AT3G29760 | 41.000 | 200 | 108 | 3 | 66 | 260 | 321 | 515 | 3.43e-45 | 159 |
| MsG0780041072.01.T01 | AT2G36550 | 51.145 | 131 | 60 | 2 | 135 | 265 | 15 | 141 | 9.58e-44 | 145 |
| MsG0780041072.01.T01 | AT4G26190 | 38.710 | 217 | 121 | 4 | 49 | 260 | 843 | 1052 | 2.24e-43 | 157 |
| MsG0780041072.01.T01 | AT4G26190 | 38.710 | 217 | 121 | 4 | 49 | 260 | 843 | 1052 | 2.24e-43 | 157 |
| MsG0780041072.01.T01 | AT4G26190 | 38.710 | 217 | 121 | 4 | 49 | 260 | 843 | 1052 | 2.24e-43 | 157 |
| MsG0780041072.01.T01 | AT4G26190 | 38.710 | 217 | 121 | 4 | 49 | 260 | 843 | 1052 | 2.24e-43 | 157 |
| MsG0780041072.01.T01 | AT4G26190 | 38.710 | 217 | 121 | 4 | 49 | 260 | 843 | 1052 | 2.24e-43 | 157 |
| MsG0780041072.01.T01 | AT3G29760 | 36.283 | 226 | 108 | 4 | 66 | 260 | 321 | 541 | 9.32e-40 | 145 |
| MsG0780041072.01.T01 | AT3G29760 | 41.353 | 133 | 69 | 2 | 66 | 193 | 321 | 449 | 3.65e-27 | 109 |
| MsG0780041072.01.T01 | AT3G29760 | 42.466 | 73 | 38 | 1 | 66 | 138 | 321 | 389 | 1.38e-11 | 64.7 |
Find 50 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATAAATCCTTCACTAAA+TGG | 0.183856 | 7:+86098818 | None:intergenic |
| CAAGGTAAATGTAGAGATTC+TGG | 0.263783 | 7:-86098286 | MsG0780041072.01.T01:CDS |
| AAAACAAGCTACTATTTGTT+TGG | 0.265573 | 7:-86098410 | MsG0780041072.01.T01:CDS |
| ATAATAAGCAATTTCTTCTT+AGG | 0.282304 | 7:+86099088 | None:intergenic |
| ACAAGTGAATTACCGGATTA+AGG | 0.285626 | 7:+86098128 | None:intergenic |
| TTGCTTATTATGAACCTTAA+CGG | 0.337126 | 7:-86099076 | MsG0780041072.01.T01:CDS |
| TCAAGAGAAAGACCCAATTC+TGG | 0.351025 | 7:+86099127 | None:intergenic |
| AAACAAGCTACTATTTGTTT+GGG | 0.367088 | 7:-86098409 | MsG0780041072.01.T01:intron |
| GGATGAGATGTTGTAATTGC+CGG | 0.373049 | 7:+86097788 | None:intergenic |
| GGTGCTTTAGCCTGTGCTAT+TGG | 0.377662 | 7:-86098441 | MsG0780041072.01.T01:CDS |
| AAGTTCAGCAGAACCAGAAT+TGG | 0.383508 | 7:-86099140 | MsG0780041072.01.T01:CDS |
| TGTCAGTGACACGAGCTCTA+TGG | 0.392097 | 7:+86099044 | None:intergenic |
| TAATCAGCGGTCCGAGACTT+TGG | 0.398239 | 7:+86099010 | None:intergenic |
| TACTTGCATATGTCACCATT+TGG | 0.400960 | 7:+86097875 | None:intergenic |
| ATACATTTAATTTAGGATCA+AGG | 0.424490 | 7:-86098304 | MsG0780041072.01.T01:intron |
| AAAGATTTGAAGTGGGTGTC+TGG | 0.432400 | 7:-86098784 | MsG0780041072.01.T01:CDS |
| TACAACATCTCATCCTGATT+GGG | 0.433254 | 7:-86097780 | MsG0780041072.01.T01:CDS |
| ATACAAGTCTTTCCTTAATC+CGG | 0.442145 | 7:-86098140 | MsG0780041072.01.T01:intron |
| TTACAACATCTCATCCTGAT+TGG | 0.442927 | 7:-86097781 | MsG0780041072.01.T01:CDS |
| GGATAACGCTATTGGTGAAC+CGG | 0.449795 | 7:-86097807 | MsG0780041072.01.T01:CDS |
| GCCTTGTCATCCTTGTCCTC+AGG | 0.462508 | 7:+86097998 | None:intergenic |
| AAGGTATTTGAAGCAGAATA+TGG | 0.491206 | 7:+86098181 | None:intergenic |
| GGATTAAGGAAAGACTTGTA+TGG | 0.503951 | 7:+86098142 | None:intergenic |
| TATGGAGAAGAAATCCGTTA+AGG | 0.508168 | 7:+86099062 | None:intergenic |
| CTGCTTAGAAAGATTTGAAG+TGG | 0.511785 | 7:-86098792 | MsG0780041072.01.T01:CDS |
| TTAATTTGAATAGATCCAAA+TGG | 0.511910 | 7:-86097890 | MsG0780041072.01.T01:intron |
| GGGTGTCTGGTCTTCTGCAA+TGG | 0.513381 | 7:-86098771 | MsG0780041072.01.T01:CDS |
| AGTTCAGCAGAACCAGAATT+GGG | 0.514991 | 7:-86099139 | MsG0780041072.01.T01:CDS |
| TTTCGAATCGCCAATAGCAC+AGG | 0.520821 | 7:+86098431 | None:intergenic |
| TCTCTTGAGAAGCTGAATCT+CGG | 0.522455 | 7:-86099112 | MsG0780041072.01.T01:CDS |
| AAATGCAGGCATAATGTTGA+CGG | 0.528741 | 7:-86098462 | MsG0780041072.01.T01:intron |
| GTCCTCAGGATCATATGACT+TGG | 0.530501 | 7:+86098012 | None:intergenic |
| TGCTTAGAAAGATTTGAAGT+GGG | 0.535088 | 7:-86098791 | MsG0780041072.01.T01:CDS |
| GGACAAGGATGACAAGGCAC+TGG | 0.535550 | 7:-86097993 | MsG0780041072.01.T01:CDS |
| TACAAGAGGCCATTTAGTGA+AGG | 0.549155 | 7:-86098827 | MsG0780041072.01.T01:CDS |
| TATGTGAAGGATAACGCTAT+TGG | 0.553909 | 7:-86097815 | MsG0780041072.01.T01:CDS |
| AGAAAGCAATTCCAAAGTCT+CGG | 0.562617 | 7:-86099021 | MsG0780041072.01.T01:CDS |
| GTGTGGGACACTATCAAGAA+AGG | 0.563403 | 7:-86098208 | MsG0780041072.01.T01:CDS |
| TCCTCAGGATCATATGACTT+GGG | 0.564239 | 7:+86098013 | None:intergenic |
| GACATATGCAAGTACTTGAA+AGG | 0.564755 | 7:-86097866 | MsG0780041072.01.T01:CDS |
| AGGCTTCTTATTGTTCTCCA+AGG | 0.569260 | 7:+86098255 | None:intergenic |
| GTCATATGATCCTGAGGACA+AGG | 0.576419 | 7:-86098008 | MsG0780041072.01.T01:CDS |
| TCCCAAGTCATATGATCCTG+AGG | 0.580636 | 7:-86098014 | MsG0780041072.01.T01:CDS |
| GACAAGGATGACAAGGCACT+GGG | 0.585950 | 7:-86097992 | MsG0780041072.01.T01:intron |
| ATTATGTTACAGTTTACAAG+AGG | 0.597781 | 7:-86098841 | MsG0780041072.01.T01:intron |
| TCCTGAGGACAAGGATGACA+AGG | 0.614403 | 7:-86097999 | MsG0780041072.01.T01:CDS |
| AGATGTTCAGTCATATGTGA+AGG | 0.632233 | 7:-86097828 | MsG0780041072.01.T01:CDS |
| GTGACGATATTTGTAATCAG+CGG | 0.676232 | 7:+86098997 | None:intergenic |
| TGGTTTGTCATCGATCAGCA+AGG | 0.682488 | 7:+86098162 | None:intergenic |
| TGGGACACTATCAAGAAAGG+AGG | 0.686741 | 7:-86098205 | MsG0780041072.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTTAAAAAGAAAATAA+GGG | + | Chr7:86098439-86098458 | None:intergenic | 10.0% |
| !! | TCAAATTTAAAAAGAAAATA+AGG | + | Chr7:86098440-86098459 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+CGG | + | Chr7:86098279-86098298 | None:intergenic | 10.0% |
| !! | TATATATGAGAAACTTATTA+CGG | + | Chr7:86097996-86098015 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTCTAGAGATT+TGG | - | Chr7:86099013-86099032 | MsG0780041072.01.T01:CDS | 15.0% |
| !!! | TTGTTTCATACATTTAATTT+AGG | - | Chr7:86098651-86098670 | MsG0780041072.01.T01:intron | 15.0% |
| !! | ATAATAAGCAATTTCTTCTT+AGG | + | Chr7:86097877-86097896 | None:intergenic | 20.0% |
| !! | ATGAATTCAGTTGTAATTAT+AGG | - | Chr7:86098295-86098314 | MsG0780041072.01.T01:intron | 20.0% |
| !!! | ACATATCAAGAAATGATTTT+AGG | + | Chr7:86098606-86098625 | None:intergenic | 20.0% |
| !!! | ATACATTTAATTTAGGATCA+AGG | - | Chr7:86098658-86098677 | MsG0780041072.01.T01:intron | 20.0% |
| !!! | TTAATTTGAATAGATCCAAA+TGG | - | Chr7:86099072-86099091 | MsG0780041072.01.T01:CDS | 20.0% |
| ! | AAAAAAGAGAGTTGTAGTTA+TGG | - | Chr7:86097745-86097764 | MsG0780041072.01.T01:CDS | 25.0% |
| ! | AAAACAAGCTACTATTTGTT+TGG | - | Chr7:86098552-86098571 | MsG0780041072.01.T01:intron | 25.0% |
| ! | AAACAAGCTACTATTTGTTT+GGG | - | Chr7:86098553-86098572 | MsG0780041072.01.T01:intron | 25.0% |
| ! | AAGAAAAACAAGTGAATTAC+CGG | + | Chr7:86098844-86098863 | None:intergenic | 25.0% |
| ! | ATTATGTTACAGTTTACAAG+AGG | - | Chr7:86098121-86098140 | MsG0780041072.01.T01:intron | 25.0% |
| ! | TCTTAAATTATTATCGGTGT+CGG | + | Chr7:86098273-86098292 | None:intergenic | 25.0% |
| ! | TTCATAAATCCTTCACTAAA+TGG | + | Chr7:86098147-86098166 | None:intergenic | 25.0% |
| ! | TTGCTTATTATGAACCTTAA+CGG | - | Chr7:86097886-86097905 | MsG0780041072.01.T01:intron | 25.0% |
| !! | ATATGACTTGGGAAAAATAA+TGG | + | Chr7:86098941-86098960 | None:intergenic | 25.0% |
| !!! | GGAAAAATAATGGATGTATT+GGG | + | Chr7:86098931-86098950 | None:intergenic | 25.0% |
| ATACAAGTCTTTCCTTAATC+CGG | - | Chr7:86098822-86098841 | MsG0780041072.01.T01:CDS | 30.0% | |
| TCAAAGAACTGAAAAAAGTG+TGG | - | Chr7:86098737-86098756 | MsG0780041072.01.T01:intron | 30.0% | |
| ! | AAGGTATTTGAAGCAGAATA+TGG | + | Chr7:86098784-86098803 | None:intergenic | 30.0% |
| ! | CAAAGAACTGAAAAAAGTGT+GGG | - | Chr7:86098738-86098757 | MsG0780041072.01.T01:intron | 30.0% |
| ! | CTGCATTTAGAGTAACAAAA+GGG | + | Chr7:86098488-86098507 | None:intergenic | 30.0% |
| ! | TGCTTAGAAAGATTTGAAGT+GGG | - | Chr7:86098171-86098190 | MsG0780041072.01.T01:CDS | 30.0% |
| ! | TGTAATTATAGGTATCGTGT+CGG | - | Chr7:86098306-86098325 | MsG0780041072.01.T01:intron | 30.0% |
| ! | TTCAGTTCTTTGAAAAAGAG+AGG | + | Chr7:86098730-86098749 | None:intergenic | 30.0% |
| !! | GGGAAAAATAATGGATGTAT+TGG | + | Chr7:86098932-86098951 | None:intergenic | 30.0% |
| !!! | AGATTCTGGTTTTAAATCCT+TGG | - | Chr7:86098690-86098709 | MsG0780041072.01.T01:intron | 30.0% |
| AAATGCAGGCATAATGTTGA+CGG | - | Chr7:86098500-86098519 | MsG0780041072.01.T01:intron | 35.0% | |
| ACAAGTGAATTACCGGATTA+AGG | + | Chr7:86098837-86098856 | None:intergenic | 35.0% | |
| AGAAAGCAATTCCAAAGTCT+CGG | - | Chr7:86097941-86097960 | MsG0780041072.01.T01:intron | 35.0% | |
| AGATGTTCAGTCATATGTGA+AGG | - | Chr7:86099134-86099153 | MsG0780041072.01.T01:CDS | 35.0% | |
| AGCTACTATTTGTTTGGGTA+CGG | - | Chr7:86098558-86098577 | MsG0780041072.01.T01:intron | 35.0% | |
| CAAGGTAAATGTAGAGATTC+TGG | - | Chr7:86098676-86098695 | MsG0780041072.01.T01:intron | 35.0% | |
| CTGCTTAGAAAGATTTGAAG+TGG | - | Chr7:86098170-86098189 | MsG0780041072.01.T01:CDS | 35.0% | |
| GACATATGCAAGTACTTGAA+AGG | - | Chr7:86099096-86099115 | MsG0780041072.01.T01:CDS | 35.0% | |
| GGATTAAGGAAAGACTTGTA+TGG | + | Chr7:86098823-86098842 | None:intergenic | 35.0% | |
| GTGACGATATTTGTAATCAG+CGG | + | Chr7:86097968-86097987 | None:intergenic | 35.0% | |
| TACAACATCTCATCCTGATT+GGG | - | Chr7:86099182-86099201 | MsG0780041072.01.T01:CDS | 35.0% | |
| TACTTGCATATGTCACCATT+TGG | + | Chr7:86099090-86099109 | None:intergenic | 35.0% | |
| TATGGAGAAGAAATCCGTTA+AGG | + | Chr7:86097903-86097922 | None:intergenic | 35.0% | |
| TATGTGAAGGATAACGCTAT+TGG | - | Chr7:86099147-86099166 | MsG0780041072.01.T01:CDS | 35.0% | |
| TTACAACATCTCATCCTGAT+TGG | - | Chr7:86099181-86099200 | MsG0780041072.01.T01:CDS | 35.0% | |
| ! | CCTGCATTTAGAGTAACAAA+AGG | + | Chr7:86098489-86098508 | None:intergenic | 35.0% |
| ! | CCTTTTGTTACTCTAAATGC+AGG | - | Chr7:86098486-86098505 | MsG0780041072.01.T01:intron | 35.0% |
| ! | CTGAACTTTTGTGATCATCA+TGG | + | Chr7:86097810-86097829 | None:intergenic | 35.0% |
| AACACTCTTCCTATGAAGCA+CGG | - | Chr7:86098225-86098244 | MsG0780041072.01.T01:CDS | 40.0% | |
| AAGTTCAGCAGAACCAGAAT+TGG | - | Chr7:86097822-86097841 | MsG0780041072.01.T01:CDS | 40.0% | |
| AGGCTTCTTATTGTTCTCCA+AGG | + | Chr7:86098710-86098729 | None:intergenic | 40.0% | |
| AGTTCAGCAGAACCAGAATT+GGG | - | Chr7:86097823-86097842 | MsG0780041072.01.T01:CDS | 40.0% | |
| ATGTATTGGGCTGCAATTTG+AGG | + | Chr7:86098918-86098937 | None:intergenic | 40.0% | |
| ATTAGGTATGTCCTCGGATT+AGG | + | Chr7:86098368-86098387 | None:intergenic | 40.0% | |
| CGAGAATAAAAAGCCCAATC+AGG | + | Chr7:86099198-86099217 | None:intergenic | 40.0% | |
| GGATGAGATGTTGTAATTGC+CGG | + | Chr7:86099177-86099196 | None:intergenic | 40.0% | |
| TACAAGAGGCCATTTAGTGA+AGG | - | Chr7:86098135-86098154 | MsG0780041072.01.T01:intron | 40.0% | |
| TCAAGAGAAAGACCCAATTC+TGG | + | Chr7:86097838-86097857 | None:intergenic | 40.0% | |
| TCCTCAGGATCATATGACTT+GGG | + | Chr7:86098952-86098971 | None:intergenic | 40.0% | |
| TCTCTTGAGAAGCTGAATCT+CGG | - | Chr7:86097850-86097869 | MsG0780041072.01.T01:CDS | 40.0% | |
| ! | AAAGATTTGAAGTGGGTGTC+TGG | - | Chr7:86098178-86098197 | MsG0780041072.01.T01:CDS | 40.0% |
| GGATAACGCTATTGGTGAAC+CGG | - | Chr7:86099155-86099174 | MsG0780041072.01.T01:CDS | 45.0% | |
| GTCATATGATCCTGAGGACA+AGG | - | Chr7:86098954-86098973 | MsG0780041072.01.T01:intron | 45.0% | |
| GTCCTCAGGATCATATGACT+TGG | + | Chr7:86098953-86098972 | None:intergenic | 45.0% | |
| GTGTGGGACACTATCAAGAA+AGG | - | Chr7:86098754-86098773 | MsG0780041072.01.T01:intron | 45.0% | |
| TATGAAGCACGAACACTCCT+CGG | + | Chr7:86098391-86098410 | None:intergenic | 45.0% | |
| TCCCAAGTCATATGATCCTG+AGG | - | Chr7:86098948-86098967 | MsG0780041072.01.T01:intron | 45.0% | |
| TGGGACACTATCAAGAAAGG+AGG | - | Chr7:86098757-86098776 | MsG0780041072.01.T01:intron | 45.0% | |
| TTTCGAATCGCCAATAGCAC+AGG | + | Chr7:86098534-86098553 | None:intergenic | 45.0% | |
| ! | TATAGGTATCGTGTCGGTGT+CGG | - | Chr7:86098312-86098331 | MsG0780041072.01.T01:intron | 45.0% |
| ! | TGGTTTGTCATCGATCAGCA+AGG | + | Chr7:86098803-86098822 | None:intergenic | 45.0% |
| GATTAGGTATGTCCCGGTGT+AGG | + | Chr7:86098352-86098371 | None:intergenic | 50.0% | |
| GGTGCTTTAGCCTGTGCTAT+TGG | - | Chr7:86098521-86098540 | MsG0780041072.01.T01:intron | 50.0% | |
| TAATCAGCGGTCCGAGACTT+TGG | + | Chr7:86097955-86097974 | None:intergenic | 50.0% | |
| TCCTGAGGACAAGGATGACA+AGG | - | Chr7:86098963-86098982 | MsG0780041072.01.T01:intron | 50.0% | |
| TGTCAGTGACACGAGCTCTA+TGG | + | Chr7:86097921-86097940 | None:intergenic | 50.0% | |
| ! | CCTCGGATTAGGTATGTCCT+CGG | + | Chr7:86098374-86098393 | None:intergenic | 50.0% |
| ! | GACAAGGATGACAAGGCACT+GGG | - | Chr7:86098970-86098989 | MsG0780041072.01.T01:intron | 50.0% |
| ! | TCCTCGGATTAGGTATGTCC+CGG | + | Chr7:86098358-86098377 | None:intergenic | 50.0% |
| !! | TATTATCGGTGTCGGCGTGT+GGG | + | Chr7:86098265-86098284 | None:intergenic | 50.0% |
| !! | TTATTATCGGTGTCGGCGTG+TGG | + | Chr7:86098266-86098285 | None:intergenic | 50.0% |
| ACCGGGACATACCTAATCCG+AGG | - | Chr7:86098354-86098373 | MsG0780041072.01.T01:intron | 55.0% | |
| CCGAGGACATACCTAATCCG+AGG | - | Chr7:86098371-86098390 | MsG0780041072.01.T01:intron | 55.0% | |
| GCACGAACACTCCTCGGATT+AGG | + | Chr7:86098385-86098404 | None:intergenic | 55.0% | |
| GCCTTGTCATCCTTGTCCTC+AGG | + | Chr7:86098967-86098986 | None:intergenic | 55.0% | |
| GGACAAGGATGACAAGGCAC+TGG | - | Chr7:86098969-86098988 | MsG0780041072.01.T01:intron | 55.0% | |
| GTGTCGTGTCCGTGCTTCAT+AGG | + | Chr7:86098237-86098256 | None:intergenic | 55.0% | |
| ! | GGGTGTCTGGTCTTCTGCAA+TGG | - | Chr7:86098191-86098210 | MsG0780041072.01.T01:CDS | 55.0% |
| ACCGACGCGTATCCTACACC+GGG | - | Chr7:86098337-86098356 | MsG0780041072.01.T01:intron | 60.0% | |
| CACCGACGCGTATCCTACAC+CGG | - | Chr7:86098336-86098355 | MsG0780041072.01.T01:intron | 60.0% | |
| TCCCGGTGTAGGATACGCGT+CGG | + | Chr7:86098341-86098360 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 86097736 | 86099248 | 86097736 | ID=MsG0780041072.01;Name=MsG0780041072.01 |
| Chr7 | mRNA | 86097736 | 86099248 | 86097736 | ID=MsG0780041072.01.T01;Parent=MsG0780041072.01;Name=MsG0780041072.01.T01;_AED=0.43;_eAED=0.44;_QI=0|0|0|1|1|1|6|0|268 |
| Chr7 | exon | 86098990 | 86099248 | 86098990 | ID=MsG0780041072.01.T01:exon:19531;Parent=MsG0780041072.01.T01 |
| Chr7 | exon | 86098770 | 86098851 | 86098770 | ID=MsG0780041072.01.T01:exon:19530;Parent=MsG0780041072.01.T01 |
| Chr7 | exon | 86098410 | 86098476 | 86098410 | ID=MsG0780041072.01.T01:exon:19529;Parent=MsG0780041072.01.T01 |
| Chr7 | exon | 86098141 | 86098311 | 86098141 | ID=MsG0780041072.01.T01:exon:19528;Parent=MsG0780041072.01.T01 |
| Chr7 | exon | 86097993 | 86098056 | 86097993 | ID=MsG0780041072.01.T01:exon:19527;Parent=MsG0780041072.01.T01 |
| Chr7 | exon | 86097736 | 86097899 | 86097736 | ID=MsG0780041072.01.T01:exon:19526;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86098990 | 86099248 | 86098990 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86098770 | 86098851 | 86098770 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86098410 | 86098476 | 86098410 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86098141 | 86098311 | 86098141 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86097993 | 86098056 | 86097993 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Chr7 | CDS | 86097736 | 86097899 | 86097736 | ID=MsG0780041072.01.T01:cds;Parent=MsG0780041072.01.T01 |
| Gene Sequence |
| Protein sequence |
