Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003281.01.T01 | XP_013467860.1 | 95.385 | 130 | 6 | 0 | 64 | 193 | 458 | 587 | 6.14E-68 | 237 |
| MsG0180003281.01.T01 | XP_013467860.1 | 90.476 | 126 | 12 | 0 | 196 | 321 | 682 | 807 | 1.30E-66 | 234 |
| MsG0180003281.01.T01 | XP_013467860.1 | 90.769 | 65 | 5 | 1 | 1 | 64 | 89 | 153 | 3.37E-25 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003281.01.T01 | Q9SVD0 | 57.258 | 124 | 45 | 2 | 197 | 318 | 694 | 811 | 7.17E-34 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003281.01.T01 | A0A072VJF0 | 95.385 | 130 | 6 | 0 | 64 | 193 | 458 | 587 | 2.93e-68 | 237 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0180003281.01 | 0.804405 | 2.194764e-49 | 1.130620e-46 |
| MsG0080048700.01 | MsG0180003281.01 | 0.806699 | 7.245957e-50 | 3.959187e-47 |
| MsG0080048701.01 | MsG0180003281.01 | 0.801918 | 7.177542e-49 | 3.469635e-46 |
| MsG0080048856.01 | MsG0180003281.01 | 0.826690 | 2.362157e-54 | 2.231200e-51 |
| MsG0080049014.01 | MsG0180003281.01 | 0.805149 | 1.534861e-49 | 8.060165e-47 |
| MsG0180000065.01 | MsG0180003281.01 | 0.808308 | 3.301500e-50 | 1.881298e-47 |
| MsG0180000353.01 | MsG0180003281.01 | 0.816239 | 6.127956e-52 | 4.318621e-49 |
| MsG0180000360.01 | MsG0180003281.01 | 0.824800 | 6.633324e-54 | 5.937706e-51 |
| MsG0180000555.01 | MsG0180003281.01 | 0.804898 | 1.731939e-49 | 9.037513e-47 |
| MsG0180001117.01 | MsG0180003281.01 | 0.815612 | 8.455510e-52 | 5.858092e-49 |
| MsG0180001178.01 | MsG0180003281.01 | 0.824494 | 7.830688e-54 | 6.947186e-51 |
| MsG0180001565.01 | MsG0180003281.01 | 0.848292 | 6.725773e-60 | 1.228508e-56 |
| MsG0180001566.01 | MsG0180003281.01 | 0.813661 | 2.286333e-51 | 1.502152e-48 |
| MsG0180002952.01 | MsG0180003281.01 | 0.813659 | 2.288531e-51 | 1.503502e-48 |
| MsG0180003281.01 | MsG0180003455.01 | 0.802758 | 4.818485e-49 | 2.379723e-46 |
| MsG0180003281.01 | MsG0180003669.01 | 0.811594 | 6.473653e-51 | 4.023650e-48 |
| MsG0180003281.01 | MsG0180003858.01 | 0.807511 | 4.877347e-50 | 2.721858e-47 |
| MsG0180003281.01 | MsG0180003994.01 | 0.802609 | 5.172537e-49 | 2.544780e-46 |
| MsG0180003281.01 | MsG0180004099.01 | 0.808169 | 3.534470e-50 | 2.006795e-47 |
| MsG0180003281.01 | MsG0180004320.01 | 0.866792 | 2.200057e-65 | 7.508781e-62 |
| MsG0180003281.01 | MsG0180004357.01 | 0.807011 | 6.224014e-50 | 3.428417e-47 |
| MsG0180003281.01 | MsG0180004463.01 | 0.806578 | 7.686799e-50 | 4.186979e-47 |
| MsG0180003281.01 | MsG0180004711.01 | 0.819766 | 9.772484e-53 | 7.589818e-50 |
| MsG0180003281.01 | MsG0180004754.01 | 0.827193 | 1.791339e-54 | 1.717110e-51 |
| MsG0180003281.01 | MsG0180004970.01 | 0.846844 | 1.682970e-59 | 2.934855e-56 |
| MsG0180003281.01 | MsG0180005835.01 | 0.804147 | 2.483081e-49 | 1.270776e-46 |
| MsG0180003281.01 | MsG0180005921.01 | 0.820997 | 5.103348e-53 | 4.101674e-50 |
| MsG0180003281.01 | MsG0180006000.01 | 0.835137 | 1.999001e-56 | 2.422322e-53 |
| MsG0180003281.01 | MsG0180006260.01 | 0.837832 | 4.118388e-57 | 5.415409e-54 |
| MsG0180003281.01 | MsG0280006311.01 | 0.807436 | 5.059828e-50 | 2.818045e-47 |
| MsG0180003281.01 | MsG0280007089.01 | 0.808977 | 2.375593e-50 | 1.377681e-47 |
| MsG0180003281.01 | MsG0280007609.01 | 0.818124 | 2.309114e-52 | 1.713534e-49 |
| MsG0180003281.01 | MsG0280008280.01 | 0.877961 | 4.127290e-69 | 2.116613e-65 |
| MsG0180003281.01 | MsG0280008615.01 | 0.800556 | 1.363654e-48 | 6.368538e-46 |
| MsG0180003281.01 | MsG0280009514.01 | 0.851600 | 7.986465e-61 | 1.624825e-57 |
| MsG0180003281.01 | MsG0280009515.01 | 0.824947 | 6.125288e-54 | 5.505805e-51 |
| MsG0180003281.01 | MsG0280009748.01 | 0.809005 | 2.342532e-50 | 1.359519e-47 |
| MsG0180003281.01 | MsG0280009794.01 | 0.807769 | 4.299693e-50 | 2.415534e-47 |
| MsG0180003281.01 | MsG0280010491.01 | 0.843184 | 1.638111e-58 | 2.542257e-55 |
| MsG0180003281.01 | MsG0280010614.01 | 0.805929 | 1.052868e-49 | 5.641025e-47 |
| MsG0180003281.01 | MsG0280010779.01 | 0.817021 | 4.092665e-52 | 2.946781e-49 |
| MsG0180003281.01 | MsG0280010795.01 | 0.805226 | 1.478748e-49 | 7.780725e-47 |
| MsG0180003281.01 | MsG0280010868.01 | 0.816983 | 4.173363e-52 | 3.001826e-49 |
| MsG0180003281.01 | MsG0280011014.01 | 0.833324 | 5.693168e-56 | 6.534678e-53 |
| MsG0180003281.01 | MsG0280011154.01 | 0.810939 | 8.982859e-51 | 5.488105e-48 |
| MsG0180003281.01 | MsG0280011258.01 | 0.831568 | 1.550426e-55 | 1.689146e-52 |
| MsG0180003281.01 | MsG0280011282.01 | 0.849785 | 2.587315e-60 | 4.960400e-57 |
| MsG0180003281.01 | MsG0280011285.01 | 0.828840 | 7.188323e-55 | 7.228200e-52 |
| MsG0180003281.01 | MsG0380011648.01 | 0.802768 | 4.795815e-49 | 2.369164e-46 |
| MsG0180003281.01 | MsG0380012146.01 | 0.816235 | 6.139502e-52 | 4.326260e-49 |
| MsG0180003281.01 | MsG0380012471.01 | 0.833716 | 4.545406e-56 | 5.278014e-53 |
| MsG0180003281.01 | MsG0380013363.01 | 0.808266 | 3.369356e-50 | 1.917950e-47 |
| MsG0180003281.01 | MsG0380013475.01 | 0.807529 | 4.835709e-50 | 2.699799e-47 |
| MsG0180003281.01 | MsG0380013834.01 | 0.832737 | 7.968310e-56 | 8.986076e-53 |
| MsG0180003281.01 | MsG0380014387.01 | 0.802538 | 5.349066e-49 | 2.626946e-46 |
| MsG0180003281.01 | MsG0380014573.01 | 0.824891 | 6.311323e-54 | 5.664307e-51 |
| MsG0180003281.01 | MsG0380015548.01 | 0.814485 | 1.504308e-51 | 1.010689e-48 |
| MsG0180003281.01 | MsG0380015677.01 | 0.852770 | 3.711678e-61 | 7.839673e-58 |
| MsG0180003281.01 | MsG0380015831.01 | 0.809560 | 1.781821e-50 | 1.049556e-47 |
| MsG0180003281.01 | MsG0380016140.01 | 0.816775 | 4.646694e-52 | 3.323084e-49 |
| MsG0180003281.01 | MsG0380016553.01 | 0.809939 | 1.476816e-50 | 8.786456e-48 |
| MsG0180003281.01 | MsG0380016703.01 | 0.817909 | 2.582265e-52 | 1.904918e-49 |
| MsG0180003281.01 | MsG0380016994.01 | 0.864003 | 1.661443e-64 | 5.137055e-61 |
| MsG0180003281.01 | MsG0380017049.01 | 0.822071 | 2.881220e-53 | 2.386333e-50 |
| MsG0180003281.01 | MsG0380017239.01 | 0.838611 | 2.594783e-57 | 3.494006e-54 |
| MsG0180003281.01 | MsG0380017266.01 | -0.801792 | 7.619515e-49 | 3.671454e-46 |
| MsG0180003281.01 | MsG0380017372.01 | 0.810739 | 9.923328e-51 | 6.030106e-48 |
| MsG0180003281.01 | MsG0380018009.01 | 0.816507 | 5.337388e-52 | 3.788946e-49 |
| MsG0180003281.01 | MsG0480018163.01 | 0.831834 | 1.333093e-55 | 1.463891e-52 |
| MsG0180003281.01 | MsG0480018289.01 | 0.802333 | 5.896447e-49 | 2.880761e-46 |
| MsG0180003281.01 | MsG0480018313.01 | 0.805189 | 1.505221e-49 | 7.912555e-47 |
| MsG0180003281.01 | MsG0480021156.01 | 0.824730 | 6.888381e-54 | 6.153628e-51 |
| MsG0180003281.01 | MsG0480022325.01 | 0.839435 | 1.587565e-57 | 2.192284e-54 |
| MsG0180003281.01 | MsG0480022331.01 | 0.823641 | 1.241620e-53 | 1.075283e-50 |
| MsG0180003281.01 | MsG0480023130.01 | 0.867915 | 9.622782e-66 | 3.416457e-62 |
| MsG0180003281.01 | MsG0480023463.01 | 0.807710 | 4.425103e-50 | 2.482210e-47 |
| MsG0180003281.01 | MsG0480023500.01 | 0.807967 | 3.901642e-50 | 2.203326e-47 |
| MsG0180003281.01 | MsG0480023620.01 | 0.820535 | 6.516906e-53 | 5.170232e-50 |
| MsG0180003281.01 | MsG0480023707.01 | 0.818994 | 1.466013e-52 | 1.114474e-49 |
| MsG0180003281.01 | MsG0580024035.01 | 0.829762 | 4.293982e-55 | 4.437219e-52 |
| MsG0180003281.01 | MsG0580024157.01 | 0.801605 | 8.320940e-49 | 3.990401e-46 |
| MsG0180003281.01 | MsG0580024489.01 | 0.837811 | 4.169598e-57 | 5.479196e-54 |
| MsG0180003281.01 | MsG0580025352.01 | 0.832505 | 9.100149e-56 | 1.019183e-52 |
| MsG0180003281.01 | MsG0580025614.01 | 0.817094 | 3.940530e-52 | 2.842760e-49 |
| MsG0180003281.01 | MsG0580026089.01 | 0.801339 | 9.433222e-49 | 4.493754e-46 |
| MsG0180003281.01 | MsG0580026593.01 | 0.813310 | 2.731173e-51 | 1.777367e-48 |
| MsG0180003281.01 | MsG0580027049.01 | 0.812373 | 4.380011e-51 | 2.780021e-48 |
| MsG0180003281.01 | MsG0580027208.01 | 0.858824 | 6.319023e-63 | 1.634091e-59 |
| MsG0180003281.01 | MsG0580028176.01 | 0.814027 | 1.898455e-51 | 1.259738e-48 |
| MsG0180003281.01 | MsG0580028307.01 | 0.819811 | 9.547689e-53 | 7.424391e-50 |
| MsG0180003281.01 | MsG0580029541.01 | 0.819008 | 1.455381e-52 | 1.106809e-49 |
| MsG0180003281.01 | MsG0580029640.01 | 0.835146 | 1.988533e-56 | 2.410358e-53 |
| MsG0180003281.01 | MsG0580029712.01 | 0.815994 | 6.948149e-52 | 4.863960e-49 |
| MsG0180003281.01 | MsG0580030173.01 | 0.811467 | 6.899651e-51 | 4.274260e-48 |
| MsG0180003281.01 | MsG0680030436.01 | 0.802310 | 5.960385e-49 | 2.910385e-46 |
| MsG0180003281.01 | MsG0680030949.01 | 0.825670 | 4.129256e-54 | 3.788838e-51 |
| MsG0180003281.01 | MsG0680031262.01 | 0.820490 | 6.673271e-53 | 5.287744e-50 |
| MsG0180003281.01 | MsG0680031353.01 | 0.816311 | 5.902742e-52 | 4.168394e-49 |
| MsG0180003281.01 | MsG0680031506.01 | 0.818814 | 1.610343e-52 | 1.217951e-49 |
| MsG0180003281.01 | MsG0680035573.01 | 0.834808 | 2.419073e-56 | 2.902528e-53 |
| MsG0180003281.01 | MsG0680035692.01 | 0.840675 | 7.538229e-58 | 1.081654e-54 |
| MsG0180003281.01 | MsG0780036477.01 | 0.820376 | 7.086019e-53 | 5.597611e-50 |
| MsG0180003281.01 | MsG0780036752.01 | 0.852495 | 4.446713e-61 | 9.308693e-58 |
| MsG0180003281.01 | MsG0780036816.01 | 0.835302 | 1.816303e-56 | 2.212324e-53 |
| MsG0180003281.01 | MsG0780038401.01 | 0.807437 | 5.058267e-50 | 2.817233e-47 |
| MsG0180003281.01 | MsG0780038424.01 | 0.804443 | 2.154708e-49 | 1.111098e-46 |
| MsG0180003281.01 | MsG0780038602.01 | 0.853396 | 2.456467e-61 | 5.300377e-58 |
| MsG0180003281.01 | MsG0780038837.01 | 0.800007 | 1.764054e-48 | 8.124354e-46 |
| MsG0180003281.01 | MsG0780039137.01 | 0.819872 | 9.244514e-53 | 7.200656e-50 |
| MsG0180003281.01 | MsG0780039243.01 | 0.804261 | 2.351787e-49 | 1.207044e-46 |
| MsG0180003281.01 | MsG0780039425.01 | 0.810143 | 1.334546e-50 | 7.982281e-48 |
| MsG0180003281.01 | MsG0780039462.01 | -0.802510 | 5.421749e-49 | 2.660703e-46 |
| MsG0180003281.01 | MsG0780039622.01 | -0.800123 | 1.670609e-48 | 7.716814e-46 |
| MsG0180003281.01 | MsG0780039655.01 | 0.835529 | 1.591693e-56 | 1.951599e-53 |
| MsG0180003281.01 | MsG0780039712.01 | 0.809966 | 1.456674e-50 | 8.672922e-48 |
| MsG0180003281.01 | MsG0780039866.01 | 0.818316 | 2.089184e-52 | 1.558560e-49 |
| MsG0180003281.01 | MsG0780040044.01 | 0.802127 | 6.501047e-49 | 3.159362e-46 |
| MsG0180003281.01 | MsG0780040057.01 | 0.801979 | 6.972391e-49 | 3.375546e-46 |
| MsG0180003281.01 | MsG0780040488.01 | 0.828952 | 6.753865e-55 | 6.813878e-52 |
| MsG0180003281.01 | MsG0780040541.01 | 0.815341 | 9.713449e-52 | 6.679340e-49 |
| MsG0180003281.01 | MsG0780040723.01 | 0.835242 | 1.880521e-56 | 2.286344e-53 |
| MsG0180003281.01 | MsG0780041072.01 | 0.802242 | 6.155621e-49 | 3.000347e-46 |
| MsG0180003281.01 | MsG0780041559.01 | 0.803521 | 3.350701e-49 | 1.687457e-46 |
| MsG0180003281.01 | MsG0780041576.01 | 0.805736 | 1.155700e-49 | 6.161729e-47 |
| MsG0180003281.01 | MsG0780041667.01 | 0.852810 | 3.615756e-61 | 7.649096e-58 |
| MsG0180003281.01 | MsG0780041739.01 | 0.813590 | 2.370255e-51 | 1.554297e-48 |
| MsG0180003281.01 | MsG0880041860.01 | 0.849614 | 2.888265e-60 | 5.506957e-57 |
| MsG0180003281.01 | MsG0880042961.01 | 0.816235 | 6.140641e-52 | 4.327031e-49 |
| MsG0180003281.01 | MsG0880043299.01 | 0.843897 | 1.056192e-58 | 1.676736e-55 |
| MsG0180003281.01 | MsG0880043491.01 | 0.841600 | 4.308156e-58 | 6.362564e-55 |
| MsG0180003281.01 | MsG0880043516.01 | 0.803921 | 2.767989e-49 | 1.408432e-46 |
| MsG0180003281.01 | MsG0880044041.01 | 0.807662 | 4.530393e-50 | 2.538013e-47 |
| MsG0180003281.01 | MsG0880044237.01 | 0.808428 | 3.112191e-50 | 1.779065e-47 |
| MsG0180003281.01 | MsG0880045257.01 | 0.812817 | 3.501994e-51 | 2.248795e-48 |
| MsG0180003281.01 | MsG0880045372.01 | 0.815124 | 1.085473e-51 | 7.419348e-49 |
| MsG0180003281.01 | MsG0880045506.01 | 0.809420 | 1.909410e-50 | 1.120566e-47 |
| MsG0180003281.01 | MsG0880046012.01 | 0.837449 | 5.164914e-57 | 6.711618e-54 |
| MsG0180003281.01 | MsG0880046165.01 | 0.809505 | 1.830697e-50 | 1.076759e-47 |
| MsG0180003281.01 | MsG0880046479.01 | 0.818579 | 1.820819e-52 | 1.368243e-49 |
| MsG0180003281.01 | MsG0880046669.01 | 0.806817 | 6.840786e-50 | 3.749392e-47 |
| MsG0180003281.01 | MsG0880046762.01 | 0.800807 | 1.211864e-48 | 5.695707e-46 |
| MsG0180003281.01 | MsG0880047120.01 | 0.844788 | 6.086573e-59 | 9.935957e-56 |
| MsG0180003281.01 | MsG0880047192.01 | 0.806479 | 8.063254e-50 | 4.381088e-47 |
| MsG0180003281.01 | MsG0880047226.01 | 0.842254 | 2.892256e-58 | 4.360042e-55 |
| MsG0180003281.01 | MsG0880047431.01 | 0.822840 | 1.909626e-53 | 1.616792e-50 |
| MsG0180003281.01 | MsG0880047666.01 | 0.830981 | 2.162175e-55 | 2.314783e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003281.01.T01 | MTR_1g057150 | 95.385 | 130 | 6 | 0 | 64 | 193 | 458 | 587 | 7.43e-72 | 237 |
| MsG0180003281.01.T01 | MTR_1g057150 | 90.476 | 126 | 12 | 0 | 196 | 321 | 682 | 807 | 1.58e-70 | 234 |
| MsG0180003281.01.T01 | MTR_1g057150 | 90.769 | 65 | 5 | 1 | 1 | 64 | 89 | 153 | 4.08e-29 | 118 |
| MsG0180003281.01.T01 | MTR_4g129230 | 70.690 | 58 | 17 | 0 | 7 | 64 | 91 | 148 | 2.06e-16 | 80.5 |
| MsG0180003281.01.T01 | MTR_1g090640 | 66.667 | 66 | 16 | 3 | 1 | 64 | 89 | 150 | 1.02e-15 | 78.6 |
| MsG0180003281.01.T01 | MTR_4g127290 | 71.429 | 63 | 9 | 3 | 6 | 64 | 96 | 153 | 8.61e-13 | 69.3 |
| MsG0180003281.01.T01 | MTR_2g038200 | 69.643 | 56 | 12 | 2 | 14 | 64 | 98 | 153 | 2.42e-12 | 68.2 |
| MsG0180003281.01.T01 | MTR_1183s0010 | 36.220 | 127 | 68 | 3 | 195 | 321 | 172 | 285 | 3.45e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003281.01.T01 | AT3G52490 | 57.258 | 124 | 45 | 2 | 197 | 318 | 694 | 811 | 7.31e-35 | 134 |
| MsG0180003281.01.T01 | AT3G52490 | 78.182 | 55 | 11 | 1 | 11 | 64 | 94 | 148 | 9.49e-19 | 87.4 |
| MsG0180003281.01.T01 | AT3G52490 | 40.789 | 152 | 61 | 6 | 68 | 193 | 451 | 599 | 2.25e-17 | 83.6 |
| MsG0180003281.01.T01 | AT4G30350 | 80.851 | 47 | 9 | 0 | 18 | 64 | 112 | 158 | 3.38e-16 | 80.1 |
| MsG0180003281.01.T01 | AT5G57710 | 76.471 | 51 | 12 | 0 | 14 | 64 | 95 | 145 | 7.34e-16 | 79.0 |
| MsG0180003281.01.T01 | AT4G29920 | 66.071 | 56 | 14 | 2 | 14 | 64 | 103 | 158 | 6.58e-12 | 67.0 |
| MsG0180003281.01.T01 | AT4G29920 | 66.071 | 56 | 14 | 2 | 14 | 64 | 103 | 158 | 6.59e-12 | 67.0 |
| MsG0180003281.01.T01 | AT5G57130 | 64.516 | 62 | 11 | 2 | 14 | 64 | 114 | 175 | 7.37e-11 | 63.9 |
Find 48 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATTCTCTTCAAATTTC+AGG | 0.131153 | 1:-59916050 | MsG0180003281.01.T01:CDS |
| TCACTAGAAGAGGTTGAATT+AGG | 0.183959 | 1:+59916835 | None:intergenic |
| TCTTGAGATGATCTTTGTTT+TGG | 0.222106 | 1:+59916217 | None:intergenic |
| ATGCAATGCTTTGGAGAAAA+AGG | 0.237090 | 1:-59916749 | MsG0180003281.01.T01:CDS |
| GATAGATTGGTGGATGAAAT+TGG | 0.256106 | 1:-59916094 | MsG0180003281.01.T01:CDS |
| GACAAGTTCTTATGTTTCTT+TGG | 0.259034 | 1:-59916155 | MsG0180003281.01.T01:CDS |
| CAAACCGTACTTGCAATTTC+CGG | 0.329618 | 1:+59916703 | None:intergenic |
| CACTAGAAGAGGTTGAATTA+GGG | 0.358043 | 1:+59916836 | None:intergenic |
| TTTCACAAATTGGTTTCAAA+AGG | 0.364259 | 1:-59916351 | MsG0180003281.01.T01:CDS |
| TGATATTAATGTTGCTACTT+TGG | 0.366558 | 1:-59916182 | MsG0180003281.01.T01:CDS |
| TATTGAGAAAGGAAGAGTTT+TGG | 0.384658 | 1:-59916326 | MsG0180003281.01.T01:CDS |
| TAGATGACCCTAGTGTTAGT+AGG | 0.393635 | 1:-59919096 | MsG0180003281.01.T01:CDS |
| TACGGTTTGCAATGCCGATC+CGG | 0.395848 | 1:-59916689 | MsG0180003281.01.T01:CDS |
| TTCTAGTGACCTTGTGCAAA+TGG | 0.396262 | 1:-59916821 | MsG0180003281.01.T01:CDS |
| TCGCTTTGTGACACATTGTT+AGG | 0.398289 | 1:+59916916 | None:intergenic |
| GAGGTTGAATTAGGGTTTGA+AGG | 0.406776 | 1:+59916844 | None:intergenic |
| TGTTGCAAAGCTCTCCTACT+TGG | 0.425481 | 1:+59917064 | None:intergenic |
| TCACCTTCTTCATCTACATC+AGG | 0.443123 | 1:-59916964 | MsG0180003281.01.T01:CDS |
| TAGGAGAGCTTTGCAACAAA+TGG | 0.443210 | 1:-59917059 | MsG0180003281.01.T01:CDS |
| TTACGATGAGGATGATAGAT+TGG | 0.450964 | 1:-59916107 | MsG0180003281.01.T01:CDS |
| TTCAAAAGGGCTATTGAGAA+AGG | 0.457640 | 1:-59916337 | MsG0180003281.01.T01:CDS |
| TTCACAAATTGGTTTCAAAA+GGG | 0.476637 | 1:-59916350 | MsG0180003281.01.T01:CDS |
| GAGAACTCTATGCAATGCTT+TGG | 0.480858 | 1:-59916758 | MsG0180003281.01.T01:CDS |
| GATTCAAATGGTGAAGAGGT+TGG | 0.485511 | 1:-59916304 | MsG0180003281.01.T01:CDS |
| GAAGAGAATCTTTCTGTCTA+CGG | 0.488889 | 1:+59916060 | None:intergenic |
| GTTTGAAGGTTCATTTGACT+TGG | 0.491779 | 1:+59916858 | None:intergenic |
| ATAGATTGGTGGATGAAATT+GGG | 0.497982 | 1:-59916093 | MsG0180003281.01.T01:CDS |
| AATACCGGAAATTGCAAGTA+CGG | 0.498764 | 1:-59916707 | MsG0180003281.01.T01:CDS |
| AGATGACCCTAGTGTTAGTA+GGG | 0.499585 | 1:-59919095 | MsG0180003281.01.T01:intron |
| CAACTTAATAGCCCTATGTT+GGG | 0.504711 | 1:-59919280 | None:intergenic |
| TCAATCTTCACCGTCAAAAG+TGG | 0.509178 | 1:+59919145 | None:intergenic |
| TATTTACAGAATGTCCAAGT+AGG | 0.512031 | 1:-59917078 | MsG0180003281.01.T01:intron |
| CTCATAACCCTACTAACACT+AGG | 0.515656 | 1:+59919088 | None:intergenic |
| TTTGAATATTTCTATTGATG+AGG | 0.522031 | 1:-59916131 | MsG0180003281.01.T01:CDS |
| AGGATGTTGTTGATGCTCAT+AGG | 0.530677 | 1:+59916936 | None:intergenic |
| TTTGGATTCAAATGGTGAAG+AGG | 0.551332 | 1:-59916308 | MsG0180003281.01.T01:CDS |
| AAACCTGATGTAGATGAAGA+AGG | 0.555376 | 1:+59916961 | None:intergenic |
| TTGCACAAGGTCACTAGAAG+AGG | 0.556105 | 1:+59916825 | None:intergenic |
| GAATGATGAGAACCCAACAT+AGG | 0.558077 | 1:+59919268 | None:intergenic |
| GCACTAAAGCATTTGAGAGA+AGG | 0.579313 | 1:+59919226 | None:intergenic |
| TTTGCAATGCCGATCCGGAA+TGG | 0.580427 | 1:-59916684 | MsG0180003281.01.T01:intron |
| CGATGAGGATGATAGATTGG+TGG | 0.588947 | 1:-59916104 | MsG0180003281.01.T01:CDS |
| AGCTTGAGCACGCTTAAAAG+CGG | 0.593845 | 1:+59919204 | None:intergenic |
| TCATAACCCTACTAACACTA+GGG | 0.629834 | 1:+59919089 | None:intergenic |
| TATTGATGAGGATTACGATG+AGG | 0.637911 | 1:-59916119 | MsG0180003281.01.T01:CDS |
| TTAGTTGCTCCATTTGCACA+AGG | 0.651285 | 1:+59916812 | None:intergenic |
| GCTCAAGCTCATCAACGTCG+TGG | 0.666837 | 1:-59919190 | MsG0180003281.01.T01:CDS |
| AACAAATGGAACTCTATGTG+TGG | 0.722514 | 1:-59917045 | MsG0180003281.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTCAATAATAATATTAT+TGG | + | Chr1:59918147-59918166 | None:intergenic | 10.0% |
| !!! | ATTTGCTATATATTTATTTT+AGG | + | Chr1:59917671-59917690 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTGACTATATAAT+TGG | - | Chr1:59917433-59917452 | MsG0180003281.01.T01:intron | 10.0% |
| !!! | TATTATATATTTTGATTTGT+GGG | + | Chr1:59918015-59918034 | None:intergenic | 10.0% |
| !!! | TTATTATATATTTTGATTTG+TGG | + | Chr1:59918016-59918035 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAGAACTAACT+AGG | - | Chr1:59917329-59917348 | MsG0180003281.01.T01:intron | 15.0% |
| !! | CAATACAAAAATGAAAATAA+AGG | - | Chr1:59917914-59917933 | MsG0180003281.01.T01:intron | 15.0% |
| !! | TATTGAAATGAAATTATTGT+AGG | + | Chr1:59918771-59918790 | None:intergenic | 15.0% |
| !! | TTGATTATAAGAATAAACAA+GGG | - | Chr1:59916702-59916721 | MsG0180003281.01.T01:CDS | 15.0% |
| !! | TTTGATTATAAGAATAAACA+AGG | - | Chr1:59916701-59916720 | MsG0180003281.01.T01:CDS | 15.0% |
| !!! | ATTATATATTTTGATTTGTG+GGG | + | Chr1:59918014-59918033 | None:intergenic | 15.0% |
| !! | ATTTATGAAGCTATTAGAAA+TGG | + | Chr1:59917590-59917609 | None:intergenic | 20.0% |
| !! | GAATATTATCTATCATGAAA+TGG | - | Chr1:59917040-59917059 | MsG0180003281.01.T01:CDS | 20.0% |
| !!! | AAAAAAGAGTTTTAATGGAA+AGG | - | Chr1:59916644-59916663 | MsG0180003281.01.T01:intron | 20.0% |
| !!! | AAAAAGAGTTTTAATGGAAA+GGG | - | Chr1:59916645-59916664 | MsG0180003281.01.T01:intron | 20.0% |
| !!! | AATTTTATCATCACAATGAT+AGG | + | Chr1:59918305-59918324 | None:intergenic | 20.0% |
| !!! | ATTTTATCATCACAATGATA+GGG | + | Chr1:59918304-59918323 | None:intergenic | 20.0% |
| !!! | GTTGATTATTTTTCACAAAT+TGG | - | Chr1:59918946-59918965 | MsG0180003281.01.T01:intron | 20.0% |
| !!! | TTTGAATATTTCTATTGATG+AGG | - | Chr1:59919176-59919195 | MsG0180003281.01.T01:CDS | 20.0% |
| ! | AAAGATTCTCTTCAAATTTC+AGG | - | Chr1:59919257-59919276 | MsG0180003281.01.T01:CDS | 25.0% |
| ! | AAATAGCAAAAGAATTAGCT+AGG | - | Chr1:59918732-59918751 | MsG0180003281.01.T01:intron | 25.0% |
| ! | AACCAAAACTATTTCCTTAT+AGG | + | Chr1:59917151-59917170 | None:intergenic | 25.0% |
| ! | AGATAGTTTCCAACAAAAAT+TGG | - | Chr1:59916366-59916385 | MsG0180003281.01.T01:CDS | 25.0% |
| ! | ATGATATGAGATTGGAAAAT+TGG | - | Chr1:59916758-59916777 | MsG0180003281.01.T01:CDS | 25.0% |
| ! | ATGGCAAAAAGATATAATAC+CGG | - | Chr1:59918585-59918604 | MsG0180003281.01.T01:intron | 25.0% |
| ! | ATTACTATCACCACATATAA+TGG | + | Chr1:59917629-59917648 | None:intergenic | 25.0% |
| ! | GAAAAAGTTGAAGAGATTAA+GGG | - | Chr1:59916615-59916634 | MsG0180003281.01.T01:intron | 25.0% |
| ! | GGTAAAATTAACATGAAGTT+TGG | - | Chr1:59916942-59916961 | MsG0180003281.01.T01:CDS | 25.0% |
| ! | GGTGATAGTAATATTTGAAA+TGG | - | Chr1:59917637-59917656 | MsG0180003281.01.T01:intron | 25.0% |
| ! | TGAAGAGAAAAAGAAAAAAG+AGG | + | Chr1:59917707-59917726 | None:intergenic | 25.0% |
| ! | TTGTACTATATTGGAAGATT+TGG | - | Chr1:59918868-59918887 | MsG0180003281.01.T01:intron | 25.0% |
| ! | TTTCCAACAAAAATTGGTAT+TGG | - | Chr1:59916372-59916391 | MsG0180003281.01.T01:CDS | 25.0% |
| !! | AGTAATGGAAAAGTTTGATA+AGG | - | Chr1:59916507-59916526 | MsG0180003281.01.T01:intron | 25.0% |
| !! | ATTTAGTTAACGAGTCTTAT+AGG | - | Chr1:59918105-59918124 | MsG0180003281.01.T01:intron | 25.0% |
| !! | TGATATTAATGTTGCTACTT+TGG | - | Chr1:59919125-59919144 | MsG0180003281.01.T01:CDS | 25.0% |
| !! | TTCACAAATTGGTTTCAAAA+GGG | - | Chr1:59918957-59918976 | MsG0180003281.01.T01:intron | 25.0% |
| !! | TTTCACAAATTGGTTTCAAA+AGG | - | Chr1:59918956-59918975 | MsG0180003281.01.T01:intron | 25.0% |
| !!! | AAGAAAAGTATTGTTGTTGT+TGG | - | Chr1:59916448-59916467 | MsG0180003281.01.T01:intron | 25.0% |
| !!! | CTTGCAAAAAAGAGTTTTAA+TGG | - | Chr1:59916639-59916658 | MsG0180003281.01.T01:intron | 25.0% |
| !!! | TGATTTTGGTAATCTTTCAA+GGG | - | Chr1:59916581-59916600 | MsG0180003281.01.T01:intron | 25.0% |
| !!! | TTAGCTTTTAACCTAGTAAA+AGG | + | Chr1:59917102-59917121 | None:intergenic | 25.0% |
| !!! | TTTTTAACTCTTTCCTAGTT+AGG | + | Chr1:59917313-59917332 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTTTCTCTTCAG+TGG | - | Chr1:59917708-59917727 | MsG0180003281.01.T01:intron | 25.0% |
| AAACTATTTCCTTATAGGCT+TGG | + | Chr1:59917146-59917165 | None:intergenic | 30.0% | |
| AACCAAAAAAAGACCTAACT+AGG | - | Chr1:59917297-59917316 | MsG0180003281.01.T01:intron | 30.0% | |
| AATAAACAAGGGATGATTAG+AGG | - | Chr1:59916713-59916732 | MsG0180003281.01.T01:CDS | 30.0% | |
| AATGTCAAGTAATCCTCATA+GGG | - | Chr1:59918897-59918916 | MsG0180003281.01.T01:intron | 30.0% | |
| ACAACCACTTAAGAAACAAT+AGG | + | Chr1:59917186-59917205 | None:intergenic | 30.0% | |
| ATCTATCATGAAATGGACAT+TGG | - | Chr1:59917047-59917066 | MsG0180003281.01.T01:CDS | 30.0% | |
| ATGAAATGGACATTGGAAAA+GGG | - | Chr1:59917054-59917073 | MsG0180003281.01.T01:CDS | 30.0% | |
| ATGATGCTAAAGAAGAAACA+TGG | - | Chr1:59918673-59918692 | MsG0180003281.01.T01:intron | 30.0% | |
| GACAAGTTCTTATGTTTCTT+TGG | - | Chr1:59919152-59919171 | MsG0180003281.01.T01:CDS | 30.0% | |
| GAGATTGGAAAATTGGTTAA+TGG | - | Chr1:59916765-59916784 | MsG0180003281.01.T01:CDS | 30.0% | |
| GGAAAAAGTTGAAGAGATTA+AGG | - | Chr1:59916614-59916633 | MsG0180003281.01.T01:intron | 30.0% | |
| GGTTACATGAGATGTAAAAA+TGG | - | Chr1:59916837-59916856 | MsG0180003281.01.T01:CDS | 30.0% | |
| GTTTCTTAAGTGGTTGTAAT+GGG | - | Chr1:59917189-59917208 | MsG0180003281.01.T01:intron | 30.0% | |
| TAGAGGTTATTATTGTCCTT+TGG | - | Chr1:59916730-59916749 | MsG0180003281.01.T01:CDS | 30.0% | |
| TATTTACAGAATGTCCAAGT+AGG | - | Chr1:59918229-59918248 | MsG0180003281.01.T01:intron | 30.0% | |
| TGAAGCAAGTTGTACTATAT+TGG | - | Chr1:59918859-59918878 | MsG0180003281.01.T01:intron | 30.0% | |
| TGTATCTTGGAGATCTAAAA+TGG | - | Chr1:59916675-59916694 | MsG0180003281.01.T01:intron | 30.0% | |
| TGTTTCTTAAGTGGTTGTAA+TGG | - | Chr1:59917188-59917207 | MsG0180003281.01.T01:intron | 30.0% | |
| ! | AAATTGGTATTGGATCCATT+AGG | - | Chr1:59916382-59916401 | MsG0180003281.01.T01:CDS | 30.0% |
| ! | AATTGGTATTGGATCCATTA+GGG | - | Chr1:59916383-59916402 | MsG0180003281.01.T01:CDS | 30.0% |
| ! | AGCCTATAAGGAAATAGTTT+TGG | - | Chr1:59917146-59917165 | MsG0180003281.01.T01:intron | 30.0% |
| ! | AGTTGTCTTTTCCTTTTACT+AGG | - | Chr1:59917088-59917107 | MsG0180003281.01.T01:intron | 30.0% |
| ! | ATAGATTGGTGGATGAAATT+GGG | - | Chr1:59919214-59919233 | MsG0180003281.01.T01:CDS | 30.0% |
| ! | CTTTCCTATTGTTTCTTAAG+TGG | - | Chr1:59917179-59917198 | MsG0180003281.01.T01:intron | 30.0% |
| ! | GATCCAATACCAATTTTTGT+TGG | + | Chr1:59916378-59916397 | None:intergenic | 30.0% |
| ! | GGTATTATATCTTTTTGCCA+TGG | + | Chr1:59918586-59918605 | None:intergenic | 30.0% |
| ! | TATTGAGAAAGGAAGAGTTT+TGG | - | Chr1:59918981-59919000 | MsG0180003281.01.T01:intron | 30.0% |
| ! | TCTCTTTCTCTTTCTGATTT+TGG | - | Chr1:59916567-59916586 | MsG0180003281.01.T01:intron | 30.0% |
| ! | TTGGAGAATGTGGAAAATTT+TGG | - | Chr1:59916790-59916809 | MsG0180003281.01.T01:CDS | 30.0% |
| !! | AAAGGGTATGTTTTGTATCT+TGG | - | Chr1:59916662-59916681 | MsG0180003281.01.T01:intron | 30.0% |
| !! | AATTAGCTAGGCTTGTTTTT+GGG | - | Chr1:59918744-59918763 | MsG0180003281.01.T01:intron | 30.0% |
| !! | CTGATTTTGGTAATCTTTCA+AGG | - | Chr1:59916580-59916599 | MsG0180003281.01.T01:intron | 30.0% |
| !! | GATGTTGATGAGTCTTTTAA+AGG | - | Chr1:59916531-59916550 | MsG0180003281.01.T01:intron | 30.0% |
| !! | TCTTGAGATGATCTTTGTTT+TGG | + | Chr1:59919093-59919112 | None:intergenic | 30.0% |
| !!! | ATGTGTATTGCTACTTTTCA+AGG | - | Chr1:59916816-59916835 | MsG0180003281.01.T01:CDS | 30.0% |
| !!! | GCTGTTTTTACCATTATATG+TGG | - | Chr1:59917616-59917635 | MsG0180003281.01.T01:intron | 30.0% |
| !!! | TTCCTAGTTAGGTCTTTTTT+TGG | + | Chr1:59917302-59917321 | None:intergenic | 30.0% |
| AAACCTGATGTAGATGAAGA+AGG | + | Chr1:59918349-59918368 | None:intergenic | 35.0% | |
| AACAAATGGAACTCTATGTG+TGG | - | Chr1:59918262-59918281 | MsG0180003281.01.T01:intron | 35.0% | |
| AATACCGGAAATTGCAAGTA+CGG | - | Chr1:59918600-59918619 | MsG0180003281.01.T01:intron | 35.0% | |
| AGGAATTGCTTACAATGATC+AGG | - | Chr1:59917934-59917953 | MsG0180003281.01.T01:intron | 35.0% | |
| AGGTGTAGTTAAAGGAGTAA+TGG | - | Chr1:59916492-59916511 | MsG0180003281.01.T01:intron | 35.0% | |
| ATCCAAATAGTCTCAAGTGA+TGG | + | Chr1:59916867-59916886 | None:intergenic | 35.0% | |
| ATCCATCACTTGAGACTATT+TGG | - | Chr1:59916862-59916881 | MsG0180003281.01.T01:CDS | 35.0% | |
| ATTGATATCACCAACCCTAA+TGG | + | Chr1:59916400-59916419 | None:intergenic | 35.0% | |
| CAATGTCAAGTAATCCTCAT+AGG | - | Chr1:59918896-59918915 | MsG0180003281.01.T01:intron | 35.0% | |
| CACTAGAAGAGGTTGAATTA+GGG | + | Chr1:59918474-59918493 | None:intergenic | 35.0% | |
| CATGAAATGGACATTGGAAA+AGG | - | Chr1:59917053-59917072 | MsG0180003281.01.T01:CDS | 35.0% | |
| GAAAATCCTTCTACTATGAG+TGG | - | Chr1:59916298-59916317 | MsG0180003281.01.T01:CDS | 35.0% | |
| GAAGAGAATCTTTCTGTCTA+CGG | + | Chr1:59919250-59919269 | None:intergenic | 35.0% | |
| GGAAAATTGGTTAATGGTGT+TGG | - | Chr1:59916771-59916790 | MsG0180003281.01.T01:CDS | 35.0% | |
| GGGGCATGGTAAAAAATAAT+TGG | + | Chr1:59917995-59918014 | None:intergenic | 35.0% | |
| GTTTGAAGGTTCATTTGACT+TGG | + | Chr1:59918452-59918471 | None:intergenic | 35.0% | |
| TATTGATGAGGATTACGATG+AGG | - | Chr1:59919188-59919207 | MsG0180003281.01.T01:CDS | 35.0% | |
| TCAACTAGAAAAACCCTATG+AGG | + | Chr1:59918913-59918932 | None:intergenic | 35.0% | |
| TCACTAGAAGAGGTTGAATT+AGG | + | Chr1:59918475-59918494 | None:intergenic | 35.0% | |
| TCATAACCCTACTAACACTA+GGG | + | Chr1:59916221-59916240 | None:intergenic | 35.0% | |
| TCTCATATCATGTGATCCAA+AGG | + | Chr1:59916749-59916768 | None:intergenic | 35.0% | |
| TCTTTCAAGGGTAGAAATTG+AGG | - | Chr1:59916593-59916612 | MsG0180003281.01.T01:intron | 35.0% | |
| TGGATCACATGATATGAGAT+TGG | - | Chr1:59916750-59916769 | MsG0180003281.01.T01:CDS | 35.0% | |
| TTACGATGAGGATGATAGAT+TGG | - | Chr1:59919200-59919219 | MsG0180003281.01.T01:CDS | 35.0% | |
| TTCAAAAGGGCTATTGAGAA+AGG | - | Chr1:59918970-59918989 | MsG0180003281.01.T01:intron | 35.0% | |
| TTGCTTTCAAATCAACACCT+TGG | + | Chr1:59918706-59918725 | None:intergenic | 35.0% | |
| TTTGGATTCAAATGGTGAAG+AGG | - | Chr1:59918999-59919018 | MsG0180003281.01.T01:intron | 35.0% | |
| ! | AACAAGAGTTGATTCAAGTG+AGG | - | Chr1:59918811-59918830 | MsG0180003281.01.T01:intron | 35.0% |
| ! | ACTCTTGAAGGTGTAGTTAA+AGG | - | Chr1:59916484-59916503 | MsG0180003281.01.T01:intron | 35.0% |
| ! | AGAAACAGCTTGTTCAACAT+TGG | + | Chr1:59916275-59916294 | None:intergenic | 35.0% |
| ! | AGTGGTTGTAATGGGAAAAA+TGG | - | Chr1:59917197-59917216 | MsG0180003281.01.T01:intron | 35.0% |
| ! | AGTTAACGAGTCTTATAGGT+AGG | - | Chr1:59918109-59918128 | MsG0180003281.01.T01:intron | 35.0% |
| ! | CACTTTGAGAGAACCAAAAA+TGG | + | Chr1:59918426-59918445 | None:intergenic | 35.0% |
| ! | GATAGATTGGTGGATGAAAT+TGG | - | Chr1:59919213-59919232 | MsG0180003281.01.T01:CDS | 35.0% |
| ! | TGTAACTTGTAACTGTGCTT+TGG | - | Chr1:59916985-59917004 | MsG0180003281.01.T01:CDS | 35.0% |
| !! | AGAAACATGGTTGTTTTCCA+AGG | - | Chr1:59918686-59918705 | MsG0180003281.01.T01:intron | 35.0% |
| !! | ATGCAATGCTTTGGAGAAAA+AGG | - | Chr1:59918558-59918577 | MsG0180003281.01.T01:intron | 35.0% |
| !! | CACAATGATAGGGTTGTTTT+TGG | + | Chr1:59918294-59918313 | None:intergenic | 35.0% |
| !! | GAATTAGCTAGGCTTGTTTT+TGG | - | Chr1:59918743-59918762 | MsG0180003281.01.T01:intron | 35.0% |
| !! | TCAACAACAACCACTTTTGA+CGG | - | Chr1:59916152-59916171 | MsG0180003281.01.T01:CDS | 35.0% |
| !! | TGTTGAACAAGCTGTTTCTT+TGG | - | Chr1:59916276-59916295 | MsG0180003281.01.T01:CDS | 35.0% |
| !!! | ATATTTTGATTTGTGGGGCA+TGG | + | Chr1:59918009-59918028 | None:intergenic | 35.0% |
| !!! | CATTTTTGGTTCTCTCAAAG+TGG | - | Chr1:59918424-59918443 | MsG0180003281.01.T01:intron | 35.0% |
| !!! | GGAAGAGTTTTGGATTCAAA+TGG | - | Chr1:59918991-59919010 | MsG0180003281.01.T01:intron | 35.0% |
| AACAAGCTGCTATTGCATGA+AGG | - | Chr1:59917769-59917788 | MsG0180003281.01.T01:intron | 40.0% | |
| AGATGACCCTAGTGTTAGTA+GGG | - | Chr1:59916212-59916231 | MsG0180003281.01.T01:CDS | 40.0% | |
| AGGATGTTGTTGATGCTCAT+AGG | + | Chr1:59918374-59918393 | None:intergenic | 40.0% | |
| CAAACCGTACTTGCAATTTC+CGG | + | Chr1:59918607-59918626 | None:intergenic | 40.0% | |
| CCGGAATGGTGAAAAGAAAA+GGG | - | Chr1:59918637-59918656 | MsG0180003281.01.T01:intron | 40.0% | |
| CTACTATGAGTGGAAAGTCA+AGG | - | Chr1:59916308-59916327 | MsG0180003281.01.T01:CDS | 40.0% | |
| CTCATAACCCTACTAACACT+AGG | + | Chr1:59916222-59916241 | None:intergenic | 40.0% | |
| GAATGTGTAGCTACTCTTGA+AGG | - | Chr1:59916472-59916491 | MsG0180003281.01.T01:intron | 40.0% | |
| GACTTTCCACTCATAGTAGA+AGG | + | Chr1:59916307-59916326 | None:intergenic | 40.0% | |
| GAGAACTCTATGCAATGCTT+TGG | - | Chr1:59918549-59918568 | MsG0180003281.01.T01:intron | 40.0% | |
| GAGGTTGAATTAGGGTTTGA+AGG | + | Chr1:59918466-59918485 | None:intergenic | 40.0% | |
| GATTCAAATGGTGAAGAGGT+TGG | - | Chr1:59919003-59919022 | MsG0180003281.01.T01:intron | 40.0% | |
| GCTATTAAGCCAAGCCTATA+AGG | - | Chr1:59917134-59917153 | MsG0180003281.01.T01:intron | 40.0% | |
| TAGATGACCCTAGTGTTAGT+AGG | - | Chr1:59916211-59916230 | MsG0180003281.01.T01:CDS | 40.0% | |
| TAGGAGAGCTTTGCAACAAA+TGG | - | Chr1:59918248-59918267 | MsG0180003281.01.T01:intron | 40.0% | |
| TATCCTATCACTATACCTGC+TGG | - | Chr1:59916890-59916909 | MsG0180003281.01.T01:CDS | 40.0% | |
| TCAATCTTCACCGTCAAAAG+TGG | + | Chr1:59916165-59916184 | None:intergenic | 40.0% | |
| TCACCTTCTTCATCTACATC+AGG | - | Chr1:59918343-59918362 | MsG0180003281.01.T01:intron | 40.0% | |
| TCCGGAATGGTGAAAAGAAA+AGG | - | Chr1:59918636-59918655 | MsG0180003281.01.T01:intron | 40.0% | |
| TCGCTTTGTGACACATTGTT+AGG | + | Chr1:59918394-59918413 | None:intergenic | 40.0% | |
| TTAGTTGCTCCATTTGCACA+AGG | + | Chr1:59918498-59918517 | None:intergenic | 40.0% | |
| TTCTAGTGACCTTGTGCAAA+TGG | - | Chr1:59918486-59918505 | MsG0180003281.01.T01:intron | 40.0% | |
| TTGTATTGTTGTAGCCATGC+AGG | + | Chr1:59917902-59917921 | None:intergenic | 40.0% | |
| ! | CCCTTTTCTTTTCACCATTC+CGG | + | Chr1:59918640-59918659 | None:intergenic | 40.0% |
| ! | CTTTGGAGAAAAAGGTTCCA+TGG | - | Chr1:59918566-59918585 | MsG0180003281.01.T01:intron | 40.0% |
| ! | GATTGATTCTCATCACTGAC+AGG | - | Chr1:59916921-59916940 | MsG0180003281.01.T01:CDS | 40.0% |
| ! | GCACTAAAGCATTTGAGAGA+AGG | + | Chr1:59916084-59916103 | None:intergenic | 40.0% |
| ! | GTTAATGGTGTTGGAGAATG+TGG | - | Chr1:59916780-59916799 | MsG0180003281.01.T01:CDS | 40.0% |
| ! | TTCTTTTCACCATTCCGGAT+CGG | + | Chr1:59918635-59918654 | None:intergenic | 40.0% |
| AGAACCAAAAATGGCGATCG+TGG | + | Chr1:59918417-59918436 | None:intergenic | 45.0% | |
| AGCTTGAGCACGCTTAAAAG+CGG | + | Chr1:59916106-59916125 | None:intergenic | 45.0% | |
| AGTAGGGTTATGAGAGAAGC+AGG | - | Chr1:59916228-59916247 | MsG0180003281.01.T01:CDS | 45.0% | |
| ATCAATCTCAAGCTTCCAGC+AGG | + | Chr1:59916908-59916927 | None:intergenic | 45.0% | |
| CAAGTTCAAGTCTTCCTGCA+TGG | - | Chr1:59917885-59917904 | MsG0180003281.01.T01:intron | 45.0% | |
| CGATGAGGATGATAGATTGG+TGG | - | Chr1:59919203-59919222 | MsG0180003281.01.T01:CDS | 45.0% | |
| CTGCTATTGCATGAAGGAGT+AGG | - | Chr1:59917775-59917794 | MsG0180003281.01.T01:intron | 45.0% | |
| CTTCCAGCAGGTATAGTGAT+AGG | + | Chr1:59916896-59916915 | None:intergenic | 45.0% | |
| TGTTGCAAAGCTCTCCTACT+TGG | + | Chr1:59918246-59918265 | None:intergenic | 45.0% | |
| TTGCACAAGGTCACTAGAAG+AGG | + | Chr1:59918485-59918504 | None:intergenic | 45.0% | |
| ! | GGTATTGGATCCATTAGGGT+TGG | - | Chr1:59916387-59916406 | MsG0180003281.01.T01:CDS | 45.0% |
| TACGGTTTGCAATGCCGATC+CGG | - | Chr1:59918618-59918637 | MsG0180003281.01.T01:intron | 50.0% | |
| TTTGCAATGCCGATCCGGAA+TGG | - | Chr1:59918623-59918642 | MsG0180003281.01.T01:intron | 50.0% | |
| GCTCAAGCTCATCAACGTCG+TGG | - | Chr1:59916117-59916136 | MsG0180003281.01.T01:CDS | 55.0% | |
| !! | GCGACCACGATCGCCATTTT+TGG | - | Chr1:59918410-59918429 | MsG0180003281.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 59916042 | 59919287 | 59916042 | ID=MsG0180003281.01;Name=MsG0180003281.01 |
| Chr1 | mRNA | 59916042 | 59919287 | 59916042 | ID=MsG0180003281.01.T01;Parent=MsG0180003281.01;Name=MsG0180003281.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|3|0|322 |
| Chr1 | exon | 59919096 | 59919287 | 59919096 | ID=MsG0180003281.01.T01:exon:3970;Parent=MsG0180003281.01.T01 |
| Chr1 | exon | 59916685 | 59917091 | 59916685 | ID=MsG0180003281.01.T01:exon:3969;Parent=MsG0180003281.01.T01 |
| Chr1 | exon | 59916042 | 59916411 | 59916042 | ID=MsG0180003281.01.T01:exon:3968;Parent=MsG0180003281.01.T01 |
| Chr1 | CDS | 59919096 | 59919287 | 59919096 | ID=MsG0180003281.01.T01:cds;Parent=MsG0180003281.01.T01 |
| Chr1 | CDS | 59916685 | 59917091 | 59916685 | ID=MsG0180003281.01.T01:cds;Parent=MsG0180003281.01.T01 |
| Chr1 | CDS | 59916042 | 59916411 | 59916042 | ID=MsG0180003281.01.T01:cds;Parent=MsG0180003281.01.T01 |
| Gene Sequence |
| Protein sequence |
