Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004114.01.T01 | AES61060.1 | 96.995 | 732 | 22 | 0 | 1 | 732 | 14 | 745 | 0 | 1457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004114.01.T01 | Q66GN3 | 51.503 | 732 | 334 | 8 | 14 | 732 | 16 | 739 | 0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004114.01.T01 | A0A072VMT9 | 96.995 | 732 | 22 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1457 |
| MsG0180004114.01.T01 | G7I4S4 | 96.995 | 732 | 22 | 0 | 1 | 732 | 14 | 745 | 0.0 | 1457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047797.01 | MsG0180004114.01 | 0.816016 | 6.872460e-52 | 4.813945e-49 |
| MsG0080048461.01 | MsG0180004114.01 | 0.807283 | 5.453010e-50 | 3.025066e-47 |
| MsG0080048726.01 | MsG0180004114.01 | 0.820024 | 8.533785e-53 | 6.675867e-50 |
| MsG0080048874.01 | MsG0180004114.01 | 0.806717 | 7.181268e-50 | 3.925772e-47 |
| MsG0080049014.01 | MsG0180004114.01 | 0.803253 | 3.807715e-49 | 1.904402e-46 |
| MsG0080049058.01 | MsG0180004114.01 | 0.805991 | 1.021488e-49 | 5.481812e-47 |
| MsG0180000065.01 | MsG0180004114.01 | 0.812412 | 4.294665e-51 | 2.728880e-48 |
| MsG0180000154.01 | MsG0180004114.01 | 0.830818 | 2.370568e-55 | 2.525651e-52 |
| MsG0180000470.01 | MsG0180004114.01 | 0.808353 | 3.228669e-50 | 1.842068e-47 |
| MsG0180000822.01 | MsG0180004114.01 | 0.825232 | 5.242850e-54 | 4.751089e-51 |
| MsG0180001471.01 | MsG0180004114.01 | 0.806632 | 7.485009e-50 | 4.082619e-47 |
| MsG0180001565.01 | MsG0180004114.01 | 0.817721 | 2.846690e-52 | 2.089300e-49 |
| MsG0180002952.01 | MsG0180004114.01 | 0.805630 | 1.216852e-49 | 6.469619e-47 |
| MsG0180003669.01 | MsG0180004114.01 | 0.806486 | 8.036667e-50 | 4.367417e-47 |
| MsG0180004114.01 | MsG0180004264.01 | 0.814147 | 1.786028e-51 | 1.189012e-48 |
| MsG0180004114.01 | MsG0180005692.01 | 0.837881 | 4.000848e-57 | 5.268545e-54 |
| MsG0180004114.01 | MsG0180006257.01 | 0.821164 | 4.670977e-53 | 3.771288e-50 |
| MsG0180004114.01 | MsG0280008270.01 | 0.840352 | 9.159894e-58 | 1.301245e-54 |
| MsG0180004114.01 | MsG0280008280.01 | 0.813230 | 2.844024e-51 | 1.846639e-48 |
| MsG0180004114.01 | MsG0280008384.01 | 0.817118 | 3.892269e-52 | 2.809733e-49 |
| MsG0180004114.01 | MsG0280009514.01 | 0.852065 | 5.893105e-61 | 1.216868e-57 |
| MsG0180004114.01 | MsG0280009986.01 | 0.804149 | 2.481513e-49 | 1.270019e-46 |
| MsG0180004114.01 | MsG0280010443.01 | 0.816108 | 6.553997e-52 | 4.602400e-49 |
| MsG0180004114.01 | MsG0280010614.01 | 0.820083 | 8.272486e-53 | 6.482175e-50 |
| MsG0180004114.01 | MsG0280010698.01 | 0.816308 | 5.912825e-52 | 4.175116e-49 |
| MsG0180004114.01 | MsG0280010779.01 | 0.813181 | 2.915172e-51 | 1.890328e-48 |
| MsG0180004114.01 | MsG0280011105.01 | 0.816343 | 5.806389e-52 | 4.103920e-49 |
| MsG0180004114.01 | MsG0280011258.01 | 0.831069 | 2.057406e-55 | 2.208317e-52 |
| MsG0180004114.01 | MsG0280011282.01 | 0.828275 | 9.843213e-55 | 9.737186e-52 |
| MsG0180004114.01 | MsG0280011285.01 | 0.827174 | 1.809590e-54 | 1.733619e-51 |
| MsG0180004114.01 | MsG0280011286.01 | 0.813998 | 1.926863e-51 | 1.277549e-48 |
| MsG0180004114.01 | MsG0380012021.01 | 0.807237 | 5.574325e-50 | 3.088704e-47 |
| MsG0180004114.01 | MsG0380012033.01 | 0.830812 | 2.377957e-55 | 2.533146e-52 |
| MsG0180004114.01 | MsG0380012101.01 | 0.806757 | 7.044479e-50 | 3.854828e-47 |
| MsG0180004114.01 | MsG0380012917.01 | 0.803224 | 3.859694e-49 | 1.928943e-46 |
| MsG0180004114.01 | MsG0380014573.01 | 0.855145 | 7.678138e-62 | 1.755266e-58 |
| MsG0180004114.01 | MsG0380014894.01 | 0.803345 | 3.644577e-49 | 1.827025e-46 |
| MsG0180004114.01 | MsG0380015468.01 | 0.814422 | 1.553483e-51 | 1.041951e-48 |
| MsG0180004114.01 | MsG0380015551.01 | 0.808868 | 2.506170e-50 | 1.449194e-47 |
| MsG0180004114.01 | MsG0380015808.01 | 0.811998 | 5.288638e-51 | 3.322726e-48 |
| MsG0180004114.01 | MsG0380015877.01 | 0.820746 | 5.826656e-53 | 4.649831e-50 |
| MsG0180004114.01 | MsG0380015878.01 | 0.801667 | 8.083206e-49 | 3.882508e-46 |
| MsG0180004114.01 | MsG0380016140.01 | 0.837375 | 5.393952e-57 | 6.992485e-54 |
| MsG0180004114.01 | MsG0380016236.01 | 0.815598 | 8.518033e-52 | 5.898764e-49 |
| MsG0180004114.01 | MsG0380016517.01 | 0.809126 | 2.207125e-50 | 1.285168e-47 |
| MsG0180004114.01 | MsG0380016909.01 | 0.830460 | 2.900046e-55 | 3.057069e-52 |
| MsG0180004114.01 | MsG0380016910.01 | 0.805715 | 1.167500e-49 | 6.221232e-47 |
| MsG0180004114.01 | MsG0380017266.01 | -0.813582 | 2.379075e-51 | 1.559733e-48 |
| MsG0180004114.01 | MsG0480018128.01 | 0.818287 | 2.120942e-52 | 1.580950e-49 |
| MsG0180004114.01 | MsG0480018163.01 | 0.803208 | 3.890901e-49 | 1.943716e-46 |
| MsG0180004114.01 | MsG0480019034.01 | 0.822251 | 2.618410e-53 | 2.179905e-50 |
| MsG0180004114.01 | MsG0480020167.01 | 0.810339 | 1.210727e-50 | 7.278850e-48 |
| MsG0180004114.01 | MsG0480020471.01 | 0.804255 | 2.357800e-49 | 1.209947e-46 |
| MsG0180004114.01 | MsG0480020559.01 | 0.803751 | 3.002166e-49 | 1.520849e-46 |
| MsG0180004114.01 | MsG0480020634.01 | 0.803642 | 3.162736e-49 | 1.597684e-46 |
| MsG0180004114.01 | MsG0480023421.01 | 0.802644 | 5.088470e-49 | 2.505626e-46 |
| MsG0180004114.01 | MsG0480023654.01 | 0.805484 | 1.305796e-49 | 6.916482e-47 |
| MsG0180004114.01 | MsG0480023718.01 | 0.808498 | 3.007623e-50 | 1.722399e-47 |
| MsG0180004114.01 | MsG0480023903.01 | 0.820154 | 7.970011e-53 | 6.257081e-50 |
| MsG0180004114.01 | MsG0580024038.01 | 0.802103 | 6.575731e-49 | 3.193668e-46 |
| MsG0180004114.01 | MsG0580024157.01 | 0.818175 | 2.248530e-52 | 1.670915e-49 |
| MsG0180004114.01 | MsG0580024383.01 | 0.821140 | 4.730671e-53 | 3.816996e-50 |
| MsG0180004114.01 | MsG0580024477.01 | 0.804913 | 1.719124e-49 | 8.974029e-47 |
| MsG0180004114.01 | MsG0580024682.01 | 0.800284 | 1.549004e-48 | 7.184704e-46 |
| MsG0180004114.01 | MsG0580024687.01 | 0.820763 | 5.775684e-53 | 4.611465e-50 |
| MsG0180004114.01 | MsG0580025022.01 | 0.818792 | 1.629146e-52 | 1.231437e-49 |
| MsG0180004114.01 | MsG0580025555.01 | 0.813853 | 2.073879e-51 | 1.369621e-48 |
| MsG0180004114.01 | MsG0580025614.01 | 0.802826 | 4.666609e-49 | 2.308808e-46 |
| MsG0180004114.01 | MsG0580026002.01 | 0.816575 | 5.153545e-52 | 3.665412e-49 |
| MsG0180004114.01 | MsG0580027208.01 | 0.807405 | 5.136895e-50 | 2.858784e-47 |
| MsG0180004114.01 | MsG0580027659.01 | 0.819190 | 1.322589e-52 | 1.010767e-49 |
| MsG0180004114.01 | MsG0580027661.01 | 0.842327 | 2.767486e-58 | 4.181587e-55 |
| MsG0180004114.01 | MsG0580027827.01 | 0.832528 | 8.980010e-56 | 1.006398e-52 |
| MsG0180004114.01 | MsG0580027828.01 | 0.838328 | 3.069458e-57 | 4.097116e-54 |
| MsG0180004114.01 | MsG0580027829.01 | 0.800085 | 1.700729e-48 | 7.848430e-46 |
| MsG0180004114.01 | MsG0580027830.01 | 0.805858 | 1.089813e-49 | 5.828528e-47 |
| MsG0180004114.01 | MsG0580027831.01 | 0.810556 | 1.086967e-50 | 6.572615e-48 |
| MsG0180004114.01 | MsG0580027832.01 | 0.839892 | 1.207242e-57 | 1.690672e-54 |
| MsG0180004114.01 | MsG0580027833.01 | 0.811359 | 7.281435e-51 | 4.497672e-48 |
| MsG0180004114.01 | MsG0580027838.01 | 0.804625 | 1.974826e-49 | 1.023110e-46 |
| MsG0180004114.01 | MsG0580029278.01 | 0.807882 | 4.068598e-50 | 2.292382e-47 |
| MsG0180004114.01 | MsG0580029640.01 | 0.836266 | 1.035087e-56 | 1.297884e-53 |
| MsG0180004114.01 | MsG0580029672.01 | 0.807061 | 6.076735e-50 | 3.351564e-47 |
| MsG0180004114.01 | MsG0680030694.01 | 0.823412 | 1.404578e-53 | 1.208381e-50 |
| MsG0180004114.01 | MsG0680032532.01 | 0.809387 | 1.940169e-50 | 1.137634e-47 |
| MsG0180004114.01 | MsG0680033412.01 | 0.807340 | 5.303551e-50 | 2.946462e-47 |
| MsG0180004114.01 | MsG0680034092.01 | 0.822918 | 1.831665e-53 | 1.554199e-50 |
| MsG0180004114.01 | MsG0680034093.01 | 0.815554 | 8.712152e-52 | 6.025685e-49 |
| MsG0180004114.01 | MsG0680034753.01 | 0.826167 | 3.147627e-54 | 2.929170e-51 |
| MsG0180004114.01 | MsG0680034843.01 | 0.800605 | 1.332273e-48 | 6.229857e-46 |
| MsG0180004114.01 | MsG0680035573.01 | 0.816200 | 6.251232e-52 | 4.400963e-49 |
| MsG0180004114.01 | MsG0680035656.01 | 0.834729 | 2.532820e-56 | 3.031502e-53 |
| MsG0180004114.01 | MsG0680035692.01 | 0.803373 | 3.596475e-49 | 1.804220e-46 |
| MsG0180004114.01 | MsG0680035716.01 | 0.813244 | 2.823987e-51 | 1.834324e-48 |
| MsG0180004114.01 | MsG0780036134.01 | 0.805381 | 1.371794e-49 | 7.246913e-47 |
| MsG0180004114.01 | MsG0780038113.01 | 0.823144 | 1.622696e-53 | 1.385730e-50 |
| MsG0180004114.01 | MsG0780038386.01 | 0.884412 | 1.961241e-71 | 1.292389e-67 |
| MsG0180004114.01 | MsG0780038401.01 | 0.846729 | 1.809291e-59 | 3.143744e-56 |
| MsG0180004114.01 | MsG0780038602.01 | 0.834025 | 3.804685e-56 | 4.459364e-53 |
| MsG0180004114.01 | MsG0780039252.01 | 0.844886 | 5.726477e-59 | 9.375861e-56 |
| MsG0180004114.01 | MsG0780039654.01 | 0.805869 | 1.083928e-49 | 5.798627e-47 |
| MsG0180004114.01 | MsG0780039655.01 | 0.846459 | 2.143442e-59 | 3.692227e-56 |
| MsG0180004114.01 | MsG0780039712.01 | 0.801566 | 8.474678e-49 | 4.060278e-46 |
| MsG0180004114.01 | MsG0780039866.01 | 0.828039 | 1.121590e-54 | 1.102004e-51 |
| MsG0180004114.01 | MsG0780040488.01 | 0.816396 | 5.650275e-52 | 3.999109e-49 |
| MsG0180004114.01 | MsG0780040669.01 | 0.822330 | 2.509690e-53 | 2.094199e-50 |
| MsG0180004114.01 | MsG0780040704.01 | 0.817721 | 2.846690e-52 | 2.089300e-49 |
| MsG0180004114.01 | MsG0780041072.01 | 0.805004 | 1.645564e-49 | 8.609297e-47 |
| MsG0180004114.01 | MsG0780041485.01 | 0.800778 | 1.228622e-48 | 5.770169e-46 |
| MsG0180004114.01 | MsG0780041674.01 | 0.812250 | 4.660784e-51 | 2.948522e-48 |
| MsG0180004114.01 | MsG0780041764.01 | 0.807091 | 5.987864e-50 | 3.305106e-47 |
| MsG0180004114.01 | MsG0780041787.01 | 0.819004 | 1.458537e-52 | 1.109075e-49 |
| MsG0180004114.01 | MsG0880042918.01 | 0.801909 | 7.206758e-49 | 3.483070e-46 |
| MsG0180004114.01 | MsG0880042940.01 | 0.809126 | 2.207101e-50 | 1.285156e-47 |
| MsG0180004114.01 | MsG0880043299.01 | 0.829104 | 6.204558e-55 | 6.288011e-52 |
| MsG0180004114.01 | MsG0880044079.01 | 0.814294 | 1.657948e-51 | 1.108162e-48 |
| MsG0180004114.01 | MsG0880044080.01 | 0.831481 | 1.629296e-55 | 1.770380e-52 |
| MsG0180004114.01 | MsG0880044251.01 | 0.813557 | 2.409627e-51 | 1.578699e-48 |
| MsG0180004114.01 | MsG0880044574.01 | 0.811434 | 7.015301e-51 | 4.342133e-48 |
| MsG0180004114.01 | MsG0880045372.01 | 0.815431 | 9.275697e-52 | 6.394022e-49 |
| MsG0180004114.01 | MsG0880045639.01 | 0.820614 | 6.248213e-53 | 4.967875e-50 |
| MsG0180004114.01 | MsG0880045782.01 | 0.810461 | 1.139393e-50 | 6.872213e-48 |
| MsG0180004114.01 | MsG0880045888.01 | 0.809368 | 1.959189e-50 | 1.148181e-47 |
| MsG0180004114.01 | MsG0880046803.01 | 0.800168 | 1.635422e-48 | 7.562870e-46 |
| MsG0180004114.01 | MsG0880047712.01 | 0.821096 | 4.842614e-53 | 3.902603e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004114.01 | MsG0180000324.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004114.01.T01 | MTR_1g075480 | 96.995 | 732 | 22 | 0 | 1 | 732 | 14 | 745 | 0.0 | 1457 |
| MsG0180004114.01.T01 | MTR_1g075480 | 96.995 | 732 | 22 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1457 |
| MsG0180004114.01.T01 | MTR_1g075480 | 96.599 | 735 | 22 | 1 | 1 | 732 | 14 | 748 | 0.0 | 1453 |
| MsG0180004114.01.T01 | MTR_1g075480 | 97.134 | 628 | 18 | 0 | 1 | 628 | 1 | 628 | 0.0 | 1258 |
| MsG0180004114.01.T01 | MTR_1g069630 | 58.865 | 705 | 277 | 6 | 35 | 732 | 15 | 713 | 0.0 | 804 |
| MsG0180004114.01.T01 | MTR_7g097230 | 56.061 | 726 | 303 | 7 | 16 | 732 | 10 | 728 | 0.0 | 772 |
| MsG0180004114.01.T01 | MTR_7g097230 | 55.536 | 569 | 240 | 5 | 16 | 575 | 10 | 574 | 0.0 | 592 |
| MsG0180004114.01.T01 | MTR_5g026810 | 44.921 | 699 | 363 | 9 | 41 | 731 | 8 | 692 | 0.0 | 577 |
| MsG0180004114.01.T01 | MTR_8g071330 | 43.857 | 700 | 368 | 11 | 41 | 731 | 2 | 685 | 0.0 | 562 |
| MsG0180004114.01.T01 | MTR_1g018040 | 42.105 | 722 | 396 | 9 | 24 | 731 | 3 | 716 | 4.63e-176 | 521 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004114.01.T01 | AT4G28600 | 51.503 | 732 | 334 | 8 | 14 | 732 | 16 | 739 | 0.0 | 694 |
| MsG0180004114.01.T01 | AT4G28600 | 51.503 | 732 | 334 | 8 | 14 | 732 | 16 | 739 | 0.0 | 694 |
| MsG0180004114.01.T01 | AT4G28600 | 51.153 | 737 | 334 | 9 | 14 | 732 | 16 | 744 | 0.0 | 689 |
| MsG0180004114.01.T01 | AT2G43040 | 44.767 | 688 | 362 | 9 | 52 | 731 | 23 | 700 | 0.0 | 548 |
| MsG0180004114.01.T01 | AT2G43040 | 44.767 | 688 | 362 | 9 | 52 | 731 | 23 | 700 | 0.0 | 548 |
| MsG0180004114.01.T01 | AT1G27460 | 39.917 | 719 | 389 | 12 | 24 | 731 | 3 | 689 | 3.27e-157 | 472 |
| MsG0180004114.01.T01 | AT1G27460 | 40.056 | 719 | 392 | 12 | 24 | 731 | 3 | 693 | 5.00e-157 | 471 |
| MsG0180004114.01.T01 | AT1G27460 | 39.892 | 554 | 305 | 8 | 24 | 566 | 3 | 539 | 1.65e-119 | 370 |
Find 100 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCTCTCCATTGTTTC+TGG | 0.103677 | 1:+73567998 | None:intergenic |
| CTTTCTATATTGCTATTAAA+AGG | 0.121491 | 1:-73570005 | MsG0180004114.01.T01:five_prime_UTR |
| AAGATGTTATCTTATCATTT+AGG | 0.224670 | 1:-73568306 | MsG0180004114.01.T01:CDS |
| GCCTCTTCTATGTTGTTTCT+TGG | 0.226248 | 1:+73568145 | None:intergenic |
| TTAGCATTAGAAGGGAATTA+AGG | 0.229003 | 1:-73569443 | MsG0180004114.01.T01:CDS |
| CTTTAGATCAAAGCGGAAAA+TGG | 0.229271 | 1:-73567421 | MsG0180004114.01.T01:CDS |
| ACTTCTCTACAAAGCTGATT+TGG | 0.244443 | 1:-73566128 | MsG0180004114.01.T01:CDS |
| AGAAGAAGTTTAGCATTAGA+AGG | 0.254089 | 1:-73569452 | MsG0180004114.01.T01:CDS |
| AAATCTAGGAACTGCAAATA+AGG | 0.308744 | 1:-73567285 | MsG0180004114.01.T01:CDS |
| ATCAAACTTGCCACATGGTT+TGG | 0.348661 | 1:+73566271 | None:intergenic |
| AAAAGGTGTTATTGTCTAAA+GGG | 0.350616 | 1:+73566034 | None:intergenic |
| GGCTAAATCGTTGCAAACTC+TGG | 0.351732 | 1:-73568814 | MsG0180004114.01.T01:CDS |
| CTTCTCTACAAAGCTGATTT+GGG | 0.359543 | 1:-73566127 | MsG0180004114.01.T01:CDS |
| TGCAATCTAGAAGCGGAATA+AGG | 0.365185 | 1:+73566993 | None:intergenic |
| GCTATTGCAAATTGTTTACT+AGG | 0.372778 | 1:-73567743 | MsG0180004114.01.T01:CDS |
| GGAAAGCCTTGCTTTATCAT+TGG | 0.376906 | 1:-73568285 | MsG0180004114.01.T01:CDS |
| TTGTGGACTGCGTTTATTAT+CGG | 0.382742 | 1:+73568902 | None:intergenic |
| GAAGACTAGAAATGGAAGTT+TGG | 0.389941 | 1:-73567097 | MsG0180004114.01.T01:CDS |
| TAGGAAGCTAGAGCCTTGTT+AGG | 0.391721 | 1:-73569038 | MsG0180004114.01.T01:CDS |
| CAAACTCTGGGAAGGTTTCA+AGG | 0.404094 | 1:-73568801 | MsG0180004114.01.T01:intron |
| GGAAGACTTGAGTATCAAAA+AGG | 0.405055 | 1:-73569017 | MsG0180004114.01.T01:CDS |
| TCTTTCGCTCTGAGTGTTTG+TGG | 0.407566 | 1:-73568061 | MsG0180004114.01.T01:CDS |
| TCGCGACAGAAGACTAGAAA+TGG | 0.422836 | 1:-73567105 | MsG0180004114.01.T01:CDS |
| AGGCGAGCATATAGTTGCTT+TGG | 0.422943 | 1:-73567939 | MsG0180004114.01.T01:CDS |
| TAGAACTGCTTCCGGAGTTA+TGG | 0.430356 | 1:-73568348 | MsG0180004114.01.T01:CDS |
| GCTGCACTTCATGTATTTGA+AGG | 0.441433 | 1:-73568984 | MsG0180004114.01.T01:CDS |
| TCATCTGCATGGTACAATCT+TGG | 0.445464 | 1:-73566151 | MsG0180004114.01.T01:CDS |
| TTTCTATATTGCTATTAAAA+GGG | 0.452062 | 1:-73570004 | MsG0180004114.01.T01:five_prime_UTR |
| CATCAGAGTCCCTTGCAACT+AGG | 0.452176 | 1:-73569362 | MsG0180004114.01.T01:CDS |
| GAAGAAGTTTAGCATTAGAA+GGG | 0.460065 | 1:-73569451 | MsG0180004114.01.T01:CDS |
| CGCAAAGAAACTGATTAAGC+TGG | 0.463190 | 1:-73567537 | MsG0180004114.01.T01:CDS |
| GCATGGAAAATGTAATCAAA+TGG | 0.470470 | 1:-73567768 | MsG0180004114.01.T01:CDS |
| AAATGCTGTAGAACTGCTTC+CGG | 0.471565 | 1:-73568356 | MsG0180004114.01.T01:CDS |
| ATCAGAGTCCCTTGCAACTA+GGG | 0.473346 | 1:-73569361 | MsG0180004114.01.T01:CDS |
| TGATAAAGTGTGTGTGTTCA+AGG | 0.476700 | 1:-73569416 | MsG0180004114.01.T01:CDS |
| TTTAGATCAAAGCGGAAAAT+GGG | 0.477721 | 1:-73567420 | MsG0180004114.01.T01:CDS |
| TATTGTCTAAAGGGTTCAAT+GGG | 0.486431 | 1:+73566043 | None:intergenic |
| TTATTGTCTAAAGGGTTCAA+TGG | 0.487445 | 1:+73566042 | None:intergenic |
| ATCAACTGCAAGAATACAAA+AGG | 0.489122 | 1:-73568248 | MsG0180004114.01.T01:CDS |
| ACAGCATGTATTGACATAGA+AGG | 0.491807 | 1:+73568867 | None:intergenic |
| AACTGCAAATAAGGTTATGA+AGG | 0.507160 | 1:-73567276 | MsG0180004114.01.T01:intron |
| AGATTTAGCAAGACAAACTT+CGG | 0.507247 | 1:+73567028 | None:intergenic |
| GCTCTTTGTTACTGCGGTGA+AGG | 0.509858 | 1:-73567959 | MsG0180004114.01.T01:CDS |
| CAAAGATTAAGAACAATGTA+AGG | 0.511122 | 1:+73567605 | None:intergenic |
| GAATCATCTCTGCGTGAAAG+TGG | 0.518712 | 1:-73569255 | MsG0180004114.01.T01:CDS |
| GCTAAATCGTTGCAAACTCT+GGG | 0.526535 | 1:-73568813 | MsG0180004114.01.T01:CDS |
| GCTTGTGTTCTGAGAAAACT+TGG | 0.530375 | 1:-73566241 | MsG0180004114.01.T01:CDS |
| AAACACTCAGAGCGAAAGAA+AGG | 0.530554 | 1:+73568065 | None:intergenic |
| CAAAGCGGAAAATGGGATCA+AGG | 0.534119 | 1:-73567413 | MsG0180004114.01.T01:CDS |
| GCTTTAATGCATCAGTGAGA+AGG | 0.537010 | 1:+73566188 | None:intergenic |
| CTCGGTATACTCAGATTGCA+TGG | 0.538524 | 1:-73567882 | MsG0180004114.01.T01:CDS |
| GCTTCTAGATTGCACTCCAC+AGG | 0.542659 | 1:-73566984 | MsG0180004114.01.T01:intron |
| AATCTGCATTACCAGAAGGT+TGG | 0.547530 | 1:-73568423 | MsG0180004114.01.T01:CDS |
| CCACTTCGCTCTCAGTTGAA+CGG | 0.557614 | 1:-73568178 | MsG0180004114.01.T01:CDS |
| AGCTTCTGAGAAATTGATGA+AGG | 0.560809 | 1:-73567636 | MsG0180004114.01.T01:CDS |
| ATACTCAAGTCTTCCTAACA+AGG | 0.561665 | 1:+73569025 | None:intergenic |
| GGAATTACTTCCAGAAACAA+TGG | 0.562728 | 1:-73568008 | MsG0180004114.01.T01:CDS |
| CTGAATAGTCCCTAGTTGCA+AGG | 0.563955 | 1:+73569352 | None:intergenic |
| TGATTTGGGAACATCAGCAT+TGG | 0.571232 | 1:-73566113 | MsG0180004114.01.T01:CDS |
| AGGTGAAAATGATACAAAGT+TGG | 0.571771 | 1:-73569301 | MsG0180004114.01.T01:CDS |
| GACACTAGCTCAACAAGTTG+AGG | 0.581000 | 1:-73568029 | MsG0180004114.01.T01:CDS |
| GGCATCATGCCACCGTGACA+AGG | 0.582269 | 1:+73567049 | None:intergenic |
| CATCTTGAGGTGAGCCTGCG+AGG | 0.583442 | 1:+73568323 | None:intergenic |
| AATCGTTGCAAACTCTGGGA+AGG | 0.586333 | 1:-73568809 | MsG0180004114.01.T01:CDS |
| AAGTGGTTATTTGAACTATG+AGG | 0.588319 | 1:-73569238 | MsG0180004114.01.T01:intron |
| TTTGTACAGCGGCTACGAAG+CGG | 0.590359 | 1:-73568209 | MsG0180004114.01.T01:CDS |
| AAACTGATTAAGCTGGAAGG+TGG | 0.590664 | 1:-73567530 | MsG0180004114.01.T01:CDS |
| AAGATTCCAATGATAAAGCA+AGG | 0.591180 | 1:+73568279 | None:intergenic |
| AGTGGTTATTCATCTCGTCC+AGG | 0.592091 | 1:-73569321 | MsG0180004114.01.T01:CDS |
| AATGATAAGATAACATCTTG+AGG | 0.602817 | 1:+73568310 | None:intergenic |
| GGTTTACTTTATGAAGCAAG+AGG | 0.603995 | 1:-73566343 | MsG0180004114.01.T01:CDS |
| TGAATAGTCCCTAGTTGCAA+GGG | 0.604887 | 1:+73569353 | None:intergenic |
| GTTGAATCTGCATTACCAGA+AGG | 0.604979 | 1:-73568427 | MsG0180004114.01.T01:CDS |
| CCGGAGTTATGGAACCTCGC+AGG | 0.605747 | 1:-73568337 | MsG0180004114.01.T01:CDS |
| TCAAAAGAAGTTTGTAGATG+CGG | 0.610615 | 1:-73567462 | MsG0180004114.01.T01:CDS |
| AACAAGGTTTGTGTCGAAGA+CGG | 0.611581 | 1:-73567824 | MsG0180004114.01.T01:CDS |
| TTGATATCAAACTTGCCACA+TGG | 0.611629 | 1:+73566266 | None:intergenic |
| AAGGCAATTTCTCAGATGCA+TGG | 0.611767 | 1:-73567785 | MsG0180004114.01.T01:CDS |
| GCCAAGAAACAACATAGAAG+AGG | 0.614198 | 1:-73568146 | MsG0180004114.01.T01:CDS |
| TTCAACTGAGAGCGAAGTGG+AGG | 0.614284 | 1:+73568181 | None:intergenic |
| CCTGCGAGGTTCCATAACTC+CGG | 0.616519 | 1:+73568337 | None:intergenic |
| GAAGGTGGGTCGAGTATTAG+CGG | 0.617728 | 1:-73567515 | MsG0180004114.01.T01:CDS |
| GACTATTCAGCATCAGCAAG+TGG | 0.619590 | 1:-73569339 | MsG0180004114.01.T01:CDS |
| ACAAAACAAACTCATCTGCA+TGG | 0.622329 | 1:-73566162 | MsG0180004114.01.T01:CDS |
| AACTGATTAAGCTGGAAGGT+GGG | 0.623802 | 1:-73567529 | MsG0180004114.01.T01:CDS |
| GATAAAGTGTGTGTGTTCAA+GGG | 0.624345 | 1:-73569415 | MsG0180004114.01.T01:CDS |
| ATGTGTACACAGCCTTGTCA+CGG | 0.636930 | 1:-73567061 | MsG0180004114.01.T01:CDS |
| ACTCTAGCTCTTTGTTACTG+CGG | 0.637326 | 1:-73567965 | MsG0180004114.01.T01:CDS |
| TGTGTTCTGAGAAAACTTGG+TGG | 0.639416 | 1:-73566238 | MsG0180004114.01.T01:CDS |
| AAGAAACTGATTAAGCTGGA+AGG | 0.640610 | 1:-73567533 | MsG0180004114.01.T01:CDS |
| CCGTTCAACTGAGAGCGAAG+TGG | 0.647279 | 1:+73568178 | None:intergenic |
| GCTAAGATTCAGATTGCACA+AGG | 0.653500 | 1:-73567371 | MsG0180004114.01.T01:CDS |
| TGTGGAGTGCAATCTAGAAG+CGG | 0.658093 | 1:+73566986 | None:intergenic |
| GAAGGCACTGAATCACGTTG+TGG | 0.672499 | 1:+73568885 | None:intergenic |
| GATGCTGCTTTAGATCAAAG+CGG | 0.675910 | 1:-73567428 | MsG0180004114.01.T01:CDS |
| TGACAAGGCTGTGTACACAT+TGG | 0.676429 | 1:+73567064 | None:intergenic |
| AGATATTGAGCCAAACCATG+TGG | 0.706345 | 1:-73566281 | MsG0180004114.01.T01:CDS |
| GCGGATATAAACTACTAGCG+CGG | 0.708738 | 1:-73567496 | MsG0180004114.01.T01:CDS |
| TGTACACAGCCTTGTCACGG+TGG | 0.722089 | 1:-73567058 | MsG0180004114.01.T01:CDS |
| GGTATACTCAGATTGCATGG+AGG | 0.769198 | 1:-73567879 | MsG0180004114.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTAAAAAATTTAAGATAAA+CGG | + | Chr1:73569117-73569136 | None:intergenic | 10.0% |
| !! | ATTAACTAACTCATAAAATT+TGG | + | Chr1:73566267-73566286 | None:intergenic | 15.0% |
| !! | TAATGTTAGAAAAAACATAA+TGG | - | Chr1:73569523-73569542 | MsG0180004114.01.T01:intron | 15.0% |
| !! | TATAAACTTATACAAAAATG+TGG | + | Chr1:73569470-73569489 | None:intergenic | 15.0% |
| !!! | AAAACAACTTTAAAAAAACA+TGG | + | Chr1:73566496-73566515 | None:intergenic | 15.0% |
| !!! | ATTTTATGAGTTAGTTAATT+TGG | - | Chr1:73566268-73566287 | MsG0180004114.01.T01:CDS | 15.0% |
| !!! | TTAAATCTATGTTTTAATAC+AGG | - | Chr1:73568892-73568911 | MsG0180004114.01.T01:CDS | 15.0% |
| !!! | TTTCTATATTGCTATTAAAA+GGG | - | Chr1:73566065-73566084 | MsG0180004114.01.T01:CDS | 15.0% |
| !! | AAGATGTTATCTTATCATTT+AGG | - | Chr1:73567763-73567782 | MsG0180004114.01.T01:CDS | 20.0% |
| !! | AAGTAATTGAATATAAGTGT+TGG | + | Chr1:73567394-73567413 | None:intergenic | 20.0% |
| !! | GAATTACTTAACAAAATTCA+AGG | + | Chr1:73566447-73566466 | None:intergenic | 20.0% |
| !! | GAATTCAGTATCTATAATAT+AGG | - | Chr1:73566151-73566170 | MsG0180004114.01.T01:CDS | 20.0% |
| !! | TTAGTCTATGTTTAGATTTA+CGG | + | Chr1:73566414-73566433 | None:intergenic | 20.0% |
| !!! | AATTTGTTGATCAGAAATTT+TGG | - | Chr1:73566219-73566238 | MsG0180004114.01.T01:CDS | 20.0% |
| !!! | CTTTCTATATTGCTATTAAA+AGG | - | Chr1:73566064-73566083 | MsG0180004114.01.T01:CDS | 20.0% |
| ! | AAAACAAATCACAAACATGA+TGG | - | Chr1:73569227-73569246 | MsG0180004114.01.T01:intron | 25.0% |
| ! | AATGATAAGATAACATCTTG+AGG | + | Chr1:73567762-73567781 | None:intergenic | 25.0% |
| ! | ATCAAAATTACAGTGACTAA+CGG | + | Chr1:73566334-73566353 | None:intergenic | 25.0% |
| ! | CAAAGATTAAGAACAATGTA+AGG | + | Chr1:73568467-73568486 | None:intergenic | 25.0% |
| ! | CAAGTCCATAATAAAAATCT+AGG | - | Chr1:73568770-73568789 | MsG0180004114.01.T01:intron | 25.0% |
| ! | GATTTCGTATATAGTTACTT+AGG | + | Chr1:73567319-73567338 | None:intergenic | 25.0% |
| ! | TCAATAAGTTAAGTTTATGC+AGG | - | Chr1:73569705-73569724 | MsG0180004114.01.T01:intron | 25.0% |
| ! | TTTGAAAAATAGAGAGAACT+CGG | - | Chr1:73568169-73568188 | MsG0180004114.01.T01:CDS | 25.0% |
| !! | CAGTTCCTAGATTTTTATTA+TGG | + | Chr1:73568778-73568797 | None:intergenic | 25.0% |
| !! | GATATAGACATTTTCATCTT+TGG | + | Chr1:73567133-73567152 | None:intergenic | 25.0% |
| !! | GTTTTCTAACATTTAACTCT+AGG | - | Chr1:73566087-73566106 | MsG0180004114.01.T01:CDS | 25.0% |
| !! | TTTGTTAAGACAATTGCTTT+TGG | + | Chr1:73569493-73569512 | None:intergenic | 25.0% |
| !!! | AAAAAGGTGTTATTGTCTAA+AGG | + | Chr1:73570039-73570058 | None:intergenic | 25.0% |
| !!! | AAAAGGTGTTATTGTCTAAA+GGG | + | Chr1:73570038-73570057 | None:intergenic | 25.0% |
| !!! | ACAATCTGAAACAAAGTTTT+CGG | + | Chr1:73567673-73567692 | None:intergenic | 25.0% |
| !!! | GCTTTTTTTTTTTTTTGCTG+TGG | + | Chr1:73569550-73569569 | None:intergenic | 25.0% |
| AAAAATTTGTGCAGACAACA+AGG | - | Chr1:73568229-73568248 | MsG0180004114.01.T01:CDS | 30.0% | |
| AAATCTAGGAACTGCAAATA+AGG | - | Chr1:73568784-73568803 | MsG0180004114.01.T01:intron | 30.0% | |
| AACTGCAAATAAGGTTATGA+AGG | - | Chr1:73568793-73568812 | MsG0180004114.01.T01:intron | 30.0% | |
| AAGATTCCAATGATAAAGCA+AGG | + | Chr1:73567793-73567812 | None:intergenic | 30.0% | |
| AAGTGGTTATTTGAACTATG+AGG | - | Chr1:73566831-73566850 | MsG0180004114.01.T01:intron | 30.0% | |
| AGAAGAAGTTTAGCATTAGA+AGG | - | Chr1:73566617-73566636 | MsG0180004114.01.T01:intron | 30.0% | |
| AGATTTAGCAAGACAAACTT+CGG | + | Chr1:73569044-73569063 | None:intergenic | 30.0% | |
| AGGTGAAAATGATACAAAGT+TGG | - | Chr1:73566768-73566787 | MsG0180004114.01.T01:intron | 30.0% | |
| AGTCTATATACTCAGACAAA+TGG | + | Chr1:73569190-73569209 | None:intergenic | 30.0% | |
| ATCAACTGCAAGAATACAAA+AGG | - | Chr1:73567821-73567840 | MsG0180004114.01.T01:CDS | 30.0% | |
| GAAGAAGTTTAGCATTAGAA+GGG | - | Chr1:73566618-73566637 | MsG0180004114.01.T01:intron | 30.0% | |
| GCATGGAAAATGTAATCAAA+TGG | - | Chr1:73568301-73568320 | MsG0180004114.01.T01:CDS | 30.0% | |
| GCTATTGCAAATTGTTTACT+AGG | - | Chr1:73568326-73568345 | MsG0180004114.01.T01:CDS | 30.0% | |
| GTTTAGATTTACGGTGAATT+TGG | + | Chr1:73566405-73566424 | None:intergenic | 30.0% | |
| TAAGTTCATGTTTATGTCTG+CGG | + | Chr1:73569630-73569649 | None:intergenic | 30.0% | |
| TATTGTCTAAAGGGTTCAAT+GGG | + | Chr1:73570029-73570048 | None:intergenic | 30.0% | |
| TCAAAAGAAGTTTGTAGATG+CGG | - | Chr1:73568607-73568626 | MsG0180004114.01.T01:intron | 30.0% | |
| TGCTTAGTTTACAACACAAT+TGG | - | Chr1:73567537-73567556 | MsG0180004114.01.T01:CDS | 30.0% | |
| TGTTATTGAAAGTCAAGCTA+GGG | + | Chr1:73569140-73569159 | None:intergenic | 30.0% | |
| TTAAACTGTTCATCCAAACA+TGG | + | Chr1:73566926-73566945 | None:intergenic | 30.0% | |
| TTAGCATTAGAAGGGAATTA+AGG | - | Chr1:73566626-73566645 | MsG0180004114.01.T01:intron | 30.0% | |
| TTATTGTCTAAAGGGTTCAA+TGG | + | Chr1:73570030-73570049 | None:intergenic | 30.0% | |
| TTTAGATCAAAGCGGAAAAT+GGG | - | Chr1:73568649-73568668 | MsG0180004114.01.T01:intron | 30.0% | |
| ! | AACTTTGTATCATTTTCACC+TGG | + | Chr1:73566769-73566788 | None:intergenic | 30.0% |
| ! | CTAGATGAACTTTTCCTTAT+AGG | - | Chr1:73567012-73567031 | MsG0180004114.01.T01:CDS | 30.0% |
| ! | TCTGACTTGAAACTAGAATT+TGG | - | Chr1:73569373-73569392 | MsG0180004114.01.T01:CDS | 30.0% |
| ! | TTGTTATTGAAAGTCAAGCT+AGG | + | Chr1:73569141-73569160 | None:intergenic | 30.0% |
| ! | TTTCAAGTCAGAATCAATTC+TGG | + | Chr1:73569365-73569384 | None:intergenic | 30.0% |
| !! | CAATCTGAAACAAAGTTTTC+GGG | + | Chr1:73567672-73567691 | None:intergenic | 30.0% |
| !! | TGCTTTATTGATGATGTTTC+AGG | - | Chr1:73566561-73566580 | MsG0180004114.01.T01:intron | 30.0% |
| AAGAAACTGATTAAGCTGGA+AGG | - | Chr1:73568536-73568555 | MsG0180004114.01.T01:intron | 35.0% | |
| ACAAAACAAACTCATCTGCA+TGG | - | Chr1:73569907-73569926 | MsG0180004114.01.T01:intron | 35.0% | |
| ACTTCTCTACAAAGCTGATT+TGG | - | Chr1:73569941-73569960 | MsG0180004114.01.T01:intron | 35.0% | |
| AGAGGAGAACTGAACTTATA+AGG | + | Chr1:73569165-73569184 | None:intergenic | 35.0% | |
| AGATAAACGGTATATACCTG+TGG | + | Chr1:73569104-73569123 | None:intergenic | 35.0% | |
| ATACTCAAGTCTTCCTAACA+AGG | + | Chr1:73567047-73567066 | None:intergenic | 35.0% | |
| CAAACATGGTCTAAGTACAT+GGG | + | Chr1:73566912-73566931 | None:intergenic | 35.0% | |
| CTTTAGATCAAAGCGGAAAA+TGG | - | Chr1:73568648-73568667 | MsG0180004114.01.T01:intron | 35.0% | |
| GAAGACTAGAAATGGAAGTT+TGG | - | Chr1:73568972-73568991 | MsG0180004114.01.T01:CDS | 35.0% | |
| GAGGAGAACTGAACTTATAA+GGG | + | Chr1:73569164-73569183 | None:intergenic | 35.0% | |
| GATAAAGTGTGTGTGTTCAA+GGG | - | Chr1:73566654-73566673 | MsG0180004114.01.T01:intron | 35.0% | |
| GGAAGACTTGAGTATCAAAA+AGG | - | Chr1:73567052-73567071 | MsG0180004114.01.T01:CDS | 35.0% | |
| GGAATTACTTCCAGAAACAA+TGG | - | Chr1:73568061-73568080 | MsG0180004114.01.T01:CDS | 35.0% | |
| GGTTATTTGAACTATGAGGT+TGG | - | Chr1:73566835-73566854 | MsG0180004114.01.T01:intron | 35.0% | |
| GGTTTACTTTATGAAGCAAG+AGG | - | Chr1:73569726-73569745 | MsG0180004114.01.T01:intron | 35.0% | |
| GTGTACAATTTAGCGTAGTT+TGG | - | Chr1:73569249-73569268 | MsG0180004114.01.T01:CDS | 35.0% | |
| TGATAAAGTGTGTGTGTTCA+AGG | - | Chr1:73566653-73566672 | MsG0180004114.01.T01:intron | 35.0% | |
| TTGATATCAAACTTGCCACA+TGG | + | Chr1:73569806-73569825 | None:intergenic | 35.0% | |
| ! | ACAGCATGTATTGACATAGA+AGG | + | Chr1:73567205-73567224 | None:intergenic | 35.0% |
| ! | AGCTTCTGAGAAATTGATGA+AGG | - | Chr1:73568433-73568452 | MsG0180004114.01.T01:CDS | 35.0% |
| ! | CTTCTCTACAAAGCTGATTT+GGG | - | Chr1:73569942-73569961 | MsG0180004114.01.T01:intron | 35.0% |
| ! | TAACACAAAGTACCAACCAA+CGG | - | Chr1:73568843-73568862 | MsG0180004114.01.T01:CDS | 35.0% |
| ! | TTGTGGACTGCGTTTATTAT+CGG | + | Chr1:73567170-73567189 | None:intergenic | 35.0% |
| !! | CGGAATCAAATTTTCAAGCA+AGG | - | Chr1:73568265-73568284 | MsG0180004114.01.T01:CDS | 35.0% |
| !! | TAGTTGCTTTGGATCTTTTG+AGG | - | Chr1:73568141-73568160 | MsG0180004114.01.T01:CDS | 35.0% |
| !!! | GCTTTGTTTCTTTTGTACAG+CGG | - | Chr1:73567849-73567868 | MsG0180004114.01.T01:CDS | 35.0% |
| !!! | TCTTGAAGCTGTTTTTCTCA+AGG | - | Chr1:73567234-73567253 | MsG0180004114.01.T01:intron | 35.0% |
| AAACACTCAGAGCGAAAGAA+AGG | + | Chr1:73568007-73568026 | None:intergenic | 40.0% | |
| AAACTGATTAAGCTGGAAGG+TGG | - | Chr1:73568539-73568558 | MsG0180004114.01.T01:intron | 40.0% | |
| AAATGCTGTAGAACTGCTTC+CGG | - | Chr1:73567713-73567732 | MsG0180004114.01.T01:CDS | 40.0% | |
| AACAAGGTTTGTGTCGAAGA+CGG | - | Chr1:73568245-73568264 | MsG0180004114.01.T01:CDS | 40.0% | |
| AACTGATTAAGCTGGAAGGT+GGG | - | Chr1:73568540-73568559 | MsG0180004114.01.T01:intron | 40.0% | |
| AAGGCAATTTCTCAGATGCA+TGG | - | Chr1:73568284-73568303 | MsG0180004114.01.T01:CDS | 40.0% | |
| AATCTGCATTACCAGAAGGT+TGG | - | Chr1:73567646-73567665 | MsG0180004114.01.T01:CDS | 40.0% | |
| AGATATTGAGCCAAACCATG+TGG | - | Chr1:73569788-73569807 | MsG0180004114.01.T01:intron | 40.0% | |
| AGTATCAATGTCATGTCTGG+TGG | - | Chr1:73567449-73567468 | MsG0180004114.01.T01:CDS | 40.0% | |
| AGTTCCAATCATAGGGTTAG+AGG | + | Chr1:73569407-73569426 | None:intergenic | 40.0% | |
| ATACTCAGACAAATGGCAAG+AGG | + | Chr1:73569183-73569202 | None:intergenic | 40.0% | |
| ATCAAACTTGCCACATGGTT+TGG | + | Chr1:73569801-73569820 | None:intergenic | 40.0% | |
| CAATAGAGCCTGCTGTAAAA+GGG | + | Chr1:73566132-73566151 | None:intergenic | 40.0% | |
| CCAAACATGGTCTAAGTACA+TGG | + | Chr1:73566913-73566932 | None:intergenic | 40.0% | |
| CCATGTACTTAGACCATGTT+TGG | - | Chr1:73566910-73566929 | MsG0180004114.01.T01:intron | 40.0% | |
| CGCAAAGAAACTGATTAAGC+TGG | - | Chr1:73568532-73568551 | MsG0180004114.01.T01:intron | 40.0% | |
| GCCAAGAAACAACATAGAAG+AGG | - | Chr1:73567923-73567942 | MsG0180004114.01.T01:CDS | 40.0% | |
| GCTAAATCGTTGCAAACTCT+GGG | - | Chr1:73567256-73567275 | MsG0180004114.01.T01:intron | 40.0% | |
| GCTAAGATTCAGATTGCACA+AGG | - | Chr1:73568698-73568717 | MsG0180004114.01.T01:intron | 40.0% | |
| GCTGCACTTCATGTATTTGA+AGG | - | Chr1:73567085-73567104 | MsG0180004114.01.T01:CDS | 40.0% | |
| GCTGTAAAAGGGAAAGAGAA+TGG | + | Chr1:73566121-73566140 | None:intergenic | 40.0% | |
| GCTTTAATGCATCAGTGAGA+AGG | + | Chr1:73569884-73569903 | None:intergenic | 40.0% | |
| GGAAAGCCTTGCTTTATCAT+TGG | - | Chr1:73567784-73567803 | MsG0180004114.01.T01:CDS | 40.0% | |
| GTCAGTATCAATGTCATGTC+TGG | - | Chr1:73567446-73567465 | MsG0180004114.01.T01:CDS | 40.0% | |
| GTTGAATCTGCATTACCAGA+AGG | - | Chr1:73567642-73567661 | MsG0180004114.01.T01:CDS | 40.0% | |
| TAACCCTATGATTGGAACTG+CGG | - | Chr1:73569408-73569427 | MsG0180004114.01.T01:CDS | 40.0% | |
| TCAATAGAGCCTGCTGTAAA+AGG | + | Chr1:73566133-73566152 | None:intergenic | 40.0% | |
| TCATCTGCATGGTACAATCT+TGG | - | Chr1:73569918-73569937 | MsG0180004114.01.T01:intron | 40.0% | |
| TCTCTTCTCTCCATTGTTTC+TGG | + | Chr1:73568074-73568093 | None:intergenic | 40.0% | |
| TGAATAGTCCCTAGTTGCAA+GGG | + | Chr1:73566719-73566738 | None:intergenic | 40.0% | |
| TGCAATCTAGAAGCGGAATA+AGG | + | Chr1:73569079-73569098 | None:intergenic | 40.0% | |
| TTTGCCTCTAACCCTATGAT+TGG | - | Chr1:73569400-73569419 | MsG0180004114.01.T01:CDS | 40.0% | |
| ! | AAAGTACCAACCAACGGAAA+AGG | - | Chr1:73568849-73568868 | MsG0180004114.01.T01:CDS | 40.0% |
| ! | AAGTTTCCTTTTCCGTTGGT+TGG | + | Chr1:73568858-73568877 | None:intergenic | 40.0% |
| ! | ACTACTAGCGCGGATTTTAT+CGG | - | Chr1:73568583-73568602 | MsG0180004114.01.T01:intron | 40.0% |
| ! | CTCTAAGTTTCCTTTTCCGT+TGG | + | Chr1:73568862-73568881 | None:intergenic | 40.0% |
| ! | TGATTTGGGAACATCAGCAT+TGG | - | Chr1:73569956-73569975 | MsG0180004114.01.T01:intron | 40.0% |
| ! | TTCTCTTTCCCTTTTACAGC+AGG | - | Chr1:73566121-73566140 | MsG0180004114.01.T01:CDS | 40.0% |
| !! | ACTCTAGCTCTTTGTTACTG+CGG | - | Chr1:73568104-73568123 | MsG0180004114.01.T01:CDS | 40.0% |
| !! | GATGCTGCTTTAGATCAAAG+CGG | - | Chr1:73568641-73568660 | MsG0180004114.01.T01:intron | 40.0% |
| !! | GCCTCTTCTATGTTGTTTCT+TGG | + | Chr1:73567927-73567946 | None:intergenic | 40.0% |
| !! | GCTTGTGTTCTGAGAAAACT+TGG | - | Chr1:73569828-73569847 | MsG0180004114.01.T01:intron | 40.0% |
| !! | TAGTTTGGTTCCACTTTTGG+AGG | - | Chr1:73569264-73569283 | MsG0180004114.01.T01:CDS | 40.0% |
| !! | TGTGTTCTGAGAAAACTTGG+TGG | - | Chr1:73569831-73569850 | MsG0180004114.01.T01:intron | 40.0% |
| AAGCAACCTTAGCACCTGTT+TGG | - | Chr1:73569566-73569585 | MsG0180004114.01.T01:intron | 45.0% | |
| AATTTCGCCTCCTCCAAAAG+TGG | + | Chr1:73569277-73569296 | None:intergenic | 45.0% | |
| ACATCACCATGCAACCAAAC+AGG | + | Chr1:73569583-73569602 | None:intergenic | 45.0% | |
| ACATGGTCTAAGTACATGGG+AGG | + | Chr1:73566909-73566928 | None:intergenic | 45.0% | |
| AGGCGAGCATATAGTTGCTT+TGG | - | Chr1:73568130-73568149 | MsG0180004114.01.T01:CDS | 45.0% | |
| AGTGGTTATTCATCTCGTCC+AGG | - | Chr1:73566748-73566767 | MsG0180004114.01.T01:intron | 45.0% | |
| ATCAGAGTCCCTTGCAACTA+GGG | - | Chr1:73566708-73566727 | MsG0180004114.01.T01:intron | 45.0% | |
| ATGCAACCAAACAGGTGCTA+AGG | + | Chr1:73569575-73569594 | None:intergenic | 45.0% | |
| CAAAGCGGAAAATGGGATCA+AGG | - | Chr1:73568656-73568675 | MsG0180004114.01.T01:intron | 45.0% | |
| CATCCGCAGTTCCAATCATA+GGG | + | Chr1:73569414-73569433 | None:intergenic | 45.0% | |
| CTCGGTATACTCAGATTGCA+TGG | - | Chr1:73568187-73568206 | MsG0180004114.01.T01:CDS | 45.0% | |
| CTGAATAGTCCCTAGTTGCA+AGG | + | Chr1:73566720-73566739 | None:intergenic | 45.0% | |
| GAATCATCTCTGCGTGAAAG+TGG | - | Chr1:73566814-73566833 | MsG0180004114.01.T01:intron | 45.0% | |
| GACACTAGCTCAACAAGTTG+AGG | - | Chr1:73568040-73568059 | MsG0180004114.01.T01:CDS | 45.0% | |
| GACTATTCAGCATCAGCAAG+TGG | - | Chr1:73566730-73566749 | MsG0180004114.01.T01:intron | 45.0% | |
| GCGGATATAAACTACTAGCG+CGG | - | Chr1:73568573-73568592 | MsG0180004114.01.T01:intron | 45.0% | |
| GGCTAAATCGTTGCAAACTC+TGG | - | Chr1:73567255-73567274 | MsG0180004114.01.T01:intron | 45.0% | |
| GGTATACTCAGATTGCATGG+AGG | - | Chr1:73568190-73568209 | MsG0180004114.01.T01:CDS | 45.0% | |
| TAGAACTGCTTCCGGAGTTA+TGG | - | Chr1:73567721-73567740 | MsG0180004114.01.T01:CDS | 45.0% | |
| TCATCCGCAGTTCCAATCAT+AGG | + | Chr1:73569415-73569434 | None:intergenic | 45.0% | |
| TCGCGACAGAAGACTAGAAA+TGG | - | Chr1:73568964-73568983 | MsG0180004114.01.T01:CDS | 45.0% | |
| TGACAAGGCTGTGTACACAT+TGG | + | Chr1:73569008-73569027 | None:intergenic | 45.0% | |
| TGTGGAGTGCAATCTAGAAG+CGG | + | Chr1:73569086-73569105 | None:intergenic | 45.0% | |
| TTAGCACCTGTTTGGTTGCA+TGG | - | Chr1:73569574-73569593 | MsG0180004114.01.T01:intron | 45.0% | |
| ! | AATCGTTGCAAACTCTGGGA+AGG | - | Chr1:73567260-73567279 | MsG0180004114.01.T01:intron | 45.0% |
| ! | ATGTGTACACAGCCTTGTCA+CGG | - | Chr1:73569008-73569027 | MsG0180004114.01.T01:CDS | 45.0% |
| ! | CAAACTCTGGGAAGGTTTCA+AGG | - | Chr1:73567268-73567287 | MsG0180004114.01.T01:intron | 45.0% |
| ! | CAAGGCTCTAGCTTCCTATA+AGG | + | Chr1:73567029-73567048 | None:intergenic | 45.0% |
| ! | TCTTTCGCTCTGAGTGTTTG+TGG | - | Chr1:73568008-73568027 | MsG0180004114.01.T01:CDS | 45.0% |
| !! | GCGTAGTTTGGTTCCACTTT+TGG | - | Chr1:73569261-73569280 | MsG0180004114.01.T01:CDS | 45.0% |
| !! | TAGGAAGCTAGAGCCTTGTT+AGG | - | Chr1:73567031-73567050 | MsG0180004114.01.T01:CDS | 45.0% |
| !! | TTTGGTTCCACTTTTGGAGG+AGG | - | Chr1:73569267-73569286 | MsG0180004114.01.T01:CDS | 45.0% |
| !!! | ACGCTGACACTGATTTTCTG+AGG | + | Chr1:73566375-73566394 | None:intergenic | 45.0% |
| CATCAGAGTCCCTTGCAACT+AGG | - | Chr1:73566707-73566726 | MsG0180004114.01.T01:intron | 50.0% | |
| CCACTTCGCTCTCAGTTGAA+CGG | - | Chr1:73567891-73567910 | MsG0180004114.01.T01:CDS | 50.0% | |
| GAAGGTGGGTCGAGTATTAG+CGG | - | Chr1:73568554-73568573 | MsG0180004114.01.T01:intron | 50.0% | |
| GCTCTTTGTTACTGCGGTGA+AGG | - | Chr1:73568110-73568129 | MsG0180004114.01.T01:CDS | 50.0% | |
| GCTTCTAGATTGCACTCCAC+AGG | - | Chr1:73569085-73569104 | MsG0180004114.01.T01:intron | 50.0% | |
| TTCAACTGAGAGCGAAGTGG+AGG | + | Chr1:73567891-73567910 | None:intergenic | 50.0% | |
| TTTGTACAGCGGCTACGAAG+CGG | - | Chr1:73567860-73567879 | MsG0180004114.01.T01:CDS | 50.0% | |
| !! | AAGTTTTCGGGCCAACCTTC+TGG | + | Chr1:73567660-73567679 | None:intergenic | 50.0% |
| !! | GAAGGCACTGAATCACGTTG+TGG | + | Chr1:73567187-73567206 | None:intergenic | 50.0% |
| !! | TGGTGCTACACACGCTACAA+CGG | + | Chr1:73567374-73567393 | None:intergenic | 50.0% |
| CCGTTCAACTGAGAGCGAAG+TGG | + | Chr1:73567894-73567913 | None:intergenic | 55.0% | |
| CCTGCGAGGTTCCATAACTC+CGG | + | Chr1:73567735-73567754 | None:intergenic | 55.0% | |
| ! | TGTACACAGCCTTGTCACGG+TGG | - | Chr1:73569011-73569030 | MsG0180004114.01.T01:CDS | 55.0% |
| CATCTTGAGGTGAGCCTGCG+AGG | + | Chr1:73567749-73567768 | None:intergenic | 60.0% | |
| CCGGAGTTATGGAACCTCGC+AGG | - | Chr1:73567732-73567751 | MsG0180004114.01.T01:CDS | 60.0% | |
| GGCATCATGCCACCGTGACA+AGG | + | Chr1:73569023-73569042 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 73566028 | 73570063 | 73566028 | ID=MsG0180004114.01;Name=MsG0180004114.01 |
| Chr1 | mRNA | 73566028 | 73570063 | 73566028 | ID=MsG0180004114.01.T01;Parent=MsG0180004114.01;Name=MsG0180004114.01.T01;_AED=0.25;_eAED=0.25;_QI=90|1|1|1|0.8|0.66|6|14|733 |
| Chr1 | exon | 73566028 | 73566364 | 73566028 | ID=MsG0180004114.01.T01:exon:31427;Parent=MsG0180004114.01.T01 |
| Chr1 | exon | 73566985 | 73567138 | 73566985 | ID=MsG0180004114.01.T01:exon:31426;Parent=MsG0180004114.01.T01 |
| Chr1 | exon | 73567277 | 73568484 | 73567277 | ID=MsG0180004114.01.T01:exon:31425;Parent=MsG0180004114.01.T01 |
| Chr1 | exon | 73568802 | 73569057 | 73568802 | ID=MsG0180004114.01.T01:exon:31424;Parent=MsG0180004114.01.T01 |
| Chr1 | exon | 73569239 | 73569508 | 73569239 | ID=MsG0180004114.01.T01:exon:31423;Parent=MsG0180004114.01.T01 |
| Chr1 | exon | 73569983 | 73570063 | 73569983 | ID=MsG0180004114.01.T01:exon:31422;Parent=MsG0180004114.01.T01 |
| Chr1 | five_prime_UTR | 73569983 | 73570063 | 73569983 | ID=MsG0180004114.01.T01:five_prime_utr;Parent=MsG0180004114.01.T01 |
| Chr1 | five_prime_UTR | 73569500 | 73569508 | 73569500 | ID=MsG0180004114.01.T01:five_prime_utr;Parent=MsG0180004114.01.T01 |
| Chr1 | CDS | 73569239 | 73569499 | 73569239 | ID=MsG0180004114.01.T01:cds;Parent=MsG0180004114.01.T01 |
| Chr1 | CDS | 73568802 | 73569057 | 73568802 | ID=MsG0180004114.01.T01:cds;Parent=MsG0180004114.01.T01 |
| Chr1 | CDS | 73567277 | 73568484 | 73567277 | ID=MsG0180004114.01.T01:cds;Parent=MsG0180004114.01.T01 |
| Chr1 | CDS | 73566985 | 73567138 | 73566985 | ID=MsG0180004114.01.T01:cds;Parent=MsG0180004114.01.T01 |
| Chr1 | CDS | 73566042 | 73566364 | 73566042 | ID=MsG0180004114.01.T01:cds;Parent=MsG0180004114.01.T01 |
| Chr1 | three_prime_UTR | 73566028 | 73566041 | 73566028 | ID=MsG0180004114.01.T01:three_prime_utr;Parent=MsG0180004114.01.T01 |
| Gene Sequence |
| Protein sequence |
