AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046012.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046012.01.T01 MTR_4g097520 97.565 657 12 3 1 655 1 655 0.0 1335
MsG0880046012.01.T01 MTR_3g103460 53.120 689 256 24 1 654 1 657 0.0 560
MsG0880046012.01.T01 MTR_1g017400 51.383 687 275 22 1 655 1 660 0.0 538
MsG0880046012.01.T01 MTR_5g015070 48.326 687 180 31 1 655 1 544 1.88e-165 485
MsG0880046012.01.T01 MTR_8g020510 47.154 492 181 11 18 493 3 431 1.49e-126 386
MsG0880046012.01.T01 MTR_4g065370 57.680 319 105 8 248 559 121 416 1.08e-109 342
MsG0880046012.01.T01 MTR_4g127930 71.689 219 58 2 293 508 143 360 4.66e-109 339
MsG0880046012.01.T01 MTR_7g080460 77.340 203 42 2 298 497 248 449 2.27e-105 335
MsG0880046012.01.T01 MTR_2g098180 66.000 250 74 5 300 540 158 405 2.84e-104 327
MsG0880046012.01.T01 MTR_8g068510 60.700 257 85 5 240 492 69 313 3.06e-98 307
MsG0880046012.01.T01 MTR_5g031880 80.978 184 34 1 300 483 215 397 3.19e-95 303
MsG0880046012.01.T01 MTR_4g130270 69.412 170 48 2 308 474 46 214 2.07e-78 254
MsG0880046012.01.T01 MTR_7g009410 63.043 184 66 2 291 474 48 229 1.86e-75 247
MsG0880046012.01.T01 MTR_2g460730 62.814 199 61 3 278 474 24 211 4.49e-75 245
MsG0880046012.01.T01 MTR_6g011490 63.784 185 66 1 290 474 42 225 3.94e-74 243
MsG0880046012.01.T01 MTR_8g044070 63.277 177 63 2 308 484 54 228 4.17e-72 239
MsG0880046012.01.T01 MTR_8g468920 52.245 245 114 3 262 506 23 264 1.19e-71 237
MsG0880046012.01.T01 MTR_4g007770 69.461 167 50 1 308 474 35 200 1.81e-71 234
MsG0880046012.01.T01 MTR_8g044040 50.000 246 115 4 308 553 55 292 7.03e-68 227
MsG0880046012.01.T01 MTR_7g091390 64.844 128 39 1 307 434 55 176 2.78e-43 161
MsG0880046012.01.T01 MTR_4g094868 53.012 166 69 3 312 477 176 332 7.29e-41 156
MsG0880046012.01.T01 MTR_4g094868 53.012 166 69 3 312 477 176 332 7.91e-41 156
MsG0880046012.01.T01 MTR_5g016810 53.012 166 69 3 312 477 152 308 3.56e-40 154
MsG0880046012.01.T01 MTR_4g061200 49.133 173 79 3 312 484 131 294 2.71e-39 149
MsG0880046012.01.T01 MTR_4g061200 49.133 173 79 3 312 484 131 294 1.98e-38 149
MsG0880046012.01.T01 MTR_7g100590 50.000 166 74 3 312 477 139 295 2.72e-38 148
MsG0880046012.01.T01 MTR_2g093060 50.602 166 73 3 312 477 134 290 7.15e-38 147
MsG0880046012.01.T01 MTR_2g093060 50.602 166 73 3 312 477 134 290 7.75e-38 147
MsG0880046012.01.T01 MTR_5g016810 50.581 172 70 4 312 477 152 314 1.33e-37 147
MsG0880046012.01.T01 MTR_4g094868 51.370 146 67 2 332 477 35 176 1.32e-33 132
MsG0880046012.01.T01 MTR_4g061200 45.087 173 71 4 312 484 131 279 3.39e-31 125
MsG0880046012.01.T01 MTR_7g061190 48.611 144 72 1 341 484 3 144 1.23e-30 117
MsG0880046012.01.T01 MTR_4g061200 45.087 173 71 4 312 484 131 279 2.67e-30 124
MsG0880046012.01.T01 MTR_2g093060 46.386 166 65 4 312 477 134 275 7.66e-30 123
MsG0880046012.01.T01 MTR_7g091390 62.921 89 27 1 346 434 6 88 8.27e-23 100
MsG0880046012.01.T01 MTR_3g090510 46.729 107 55 1 347 453 163 267 9.59e-19 89.4
MsG0880046012.01.T01 MTR_7g060560 42.727 110 60 2 344 453 153 259 2.42e-15 79.0
MsG0880046012.01.T01 MTR_1g049140 41.538 130 68 3 288 417 113 234 3.35e-15 76.3
MsG0880046012.01.T01 MTR_1g049140 42.063 126 65 3 288 413 113 230 4.26e-15 78.2
MsG0880046012.01.T01 MTR_1g049140 41.538 130 68 3 288 417 113 234 1.06e-14 76.3
MsG0880046012.01.T01 MTR_1g028560 48.649 74 36 1 396 469 99 170 2.81e-11 65.9
MsG0880046012.01.T01 MTR_4g086190 35.185 108 64 3 412 516 96 200 4.42e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046012.01.T01 AT4G37750 52.065 557 170 20 1 523 1 494 5.17e-155 459
MsG0880046012.01.T01 AT1G72570 71.429 245 63 4 252 492 164 405 3.31e-117 357
MsG0880046012.01.T01 AT5G57390 82.540 189 28 3 300 485 73 259 1.57e-108 335
MsG0880046012.01.T01 AT1G51190 64.504 262 84 5 248 504 128 385 1.59e-108 339
MsG0880046012.01.T01 AT3G20840 65.152 264 59 6 248 497 125 369 1.19e-107 337
MsG0880046012.01.T01 AT5G57390 82.540 189 28 3 300 485 191 377 1.61e-107 336
MsG0880046012.01.T01 AT5G17430 63.004 273 92 4 300 569 136 402 4.35e-105 329
MsG0880046012.01.T01 AT5G17430 63.004 273 92 4 300 569 198 464 9.17e-105 330
MsG0880046012.01.T01 AT5G10510 73.367 199 52 1 285 483 203 400 2.65e-90 291
MsG0880046012.01.T01 AT5G65510 68.692 214 63 2 285 495 146 358 4.02e-89 285
MsG0880046012.01.T01 AT5G65510 68.692 214 63 2 285 495 204 416 4.66e-89 286
MsG0880046012.01.T01 AT5G65510 68.692 214 63 2 285 495 204 416 4.66e-89 286
MsG0880046012.01.T01 AT5G10510 72.277 202 52 2 285 483 203 403 2.55e-88 286
MsG0880046012.01.T01 AT5G10510 72.277 202 52 2 285 483 203 403 2.55e-88 286
MsG0880046012.01.T01 AT5G10510 72.277 202 52 2 285 483 226 426 4.17e-88 286
MsG0880046012.01.T01 AT5G10510 72.277 202 52 2 285 483 241 441 4.90e-88 286
MsG0880046012.01.T01 AT5G10510 72.277 202 52 2 285 483 241 441 4.90e-88 286
MsG0880046012.01.T01 AT5G10510 65.315 222 53 2 285 483 241 461 1.02e-83 275
MsG0880046012.01.T01 AT5G65510 70.988 162 43 2 285 443 146 306 3.77e-77 249
MsG0880046012.01.T01 AT3G54320 67.647 170 51 2 308 474 61 229 6.58e-67 226
MsG0880046012.01.T01 AT3G54320 67.647 170 51 2 308 474 61 229 7.15e-67 226
MsG0880046012.01.T01 AT1G79700 67.059 170 52 2 308 474 48 216 5.53e-61 206
MsG0880046012.01.T01 AT1G16060 66.092 174 55 2 304 474 50 222 1.94e-59 203
MsG0880046012.01.T01 AT1G79700 62.941 170 49 3 308 474 48 206 3.68e-53 185
MsG0880046012.01.T01 AT3G54320 69.767 129 38 1 346 474 36 163 1.83e-49 177
MsG0880046012.01.T01 AT3G54320 69.767 129 38 1 346 474 36 163 1.83e-49 177
MsG0880046012.01.T01 AT1G79700 67.442 129 41 1 346 474 7 134 1.31e-41 151
MsG0880046012.01.T01 AT1G79700 67.442 129 41 1 346 474 13 140 1.39e-41 151
MsG0880046012.01.T01 AT4G36920 42.276 246 112 5 236 477 68 287 4.08e-41 155
MsG0880046012.01.T01 AT4G36920 42.276 246 112 5 236 477 68 287 4.08e-41 155
MsG0880046012.01.T01 AT2G41710 56.209 153 55 3 285 434 46 189 7.98e-41 154
MsG0880046012.01.T01 AT5G67180 48.571 175 81 3 312 486 96 261 1.45e-40 150
MsG0880046012.01.T01 AT2G41710 56.209 153 55 3 285 434 46 189 1.62e-40 154
MsG0880046012.01.T01 AT1G16060 65.926 135 45 1 340 474 19 152 1.92e-40 149
MsG0880046012.01.T01 AT5G67180 48.864 176 81 3 312 487 96 262 2.38e-40 150
MsG0880046012.01.T01 AT5G67180 48.864 176 81 3 312 487 96 262 5.56e-40 150
MsG0880046012.01.T01 AT2G41710 54.430 158 55 4 285 434 46 194 1.87e-38 148
MsG0880046012.01.T01 AT2G28550 42.920 226 97 8 312 527 153 356 2.30e-37 145
MsG0880046012.01.T01 AT2G41710 59.836 122 40 2 316 434 109 224 2.57e-34 136
MsG0880046012.01.T01 AT2G28550 48.921 139 62 3 312 450 153 282 7.62e-31 124
MsG0880046012.01.T01 AT3G54320 71.910 89 24 1 386 474 1 88 2.07e-30 121
MsG0880046012.01.T01 AT5G67180 47.917 144 66 3 312 455 96 230 4.68e-30 119
MsG0880046012.01.T01 AT1G16060 69.663 89 26 1 386 474 1 88 1.73e-29 116
MsG0880046012.01.T01 AT1G16060 69.663 89 26 1 386 474 1 88 1.73e-29 116
MsG0880046012.01.T01 AT1G16060 69.663 89 26 1 386 474 1 88 1.73e-29 116
MsG0880046012.01.T01 AT1G16060 69.663 89 26 1 386 474 1 88 1.73e-29 116
MsG0880046012.01.T01 AT2G28550 39.823 226 89 9 312 527 153 341 1.98e-29 122
MsG0880046012.01.T01 AT2G28550 48.800 125 55 3 312 436 153 268 3.26e-26 108
MsG0880046012.01.T01 AT2G28550 48.800 125 55 3 312 436 153 268 3.26e-26 108
MsG0880046012.01.T01 AT2G39250 41.026 117 62 2 313 429 109 218 4.00e-23 99.0
MsG0880046012.01.T01 AT2G39250 38.235 136 77 2 293 428 89 217 1.17e-22 100
MsG0880046012.01.T01 AT2G28550 38.542 192 78 7 346 527 14 175 3.40e-21 94.7
MsG0880046012.01.T01 AT5G60120 44.882 127 61 3 309 435 157 274 1.71e-19 91.7
MsG0880046012.01.T01 AT5G60120 44.882 127 61 3 309 435 157 274 1.71e-19 91.7
MsG0880046012.01.T01 AT5G60120 44.882 127 61 3 309 435 157 274 1.71e-19 91.7
MsG0880046012.01.T01 AT5G60120 39.623 159 72 5 309 467 157 291 2.81e-19 91.7
MsG0880046012.01.T01 AT5G60120 39.623 159 72 5 309 467 157 291 2.97e-19 91.7
MsG0880046012.01.T01 AT5G60120 39.623 159 72 5 309 467 157 291 3.91e-19 91.7
MsG0880046012.01.T01 AT3G54990 46.154 104 49 2 312 415 122 218 3.71e-18 85.1
MsG0880046012.01.T01 AT3G54990 46.154 104 49 2 312 415 122 218 2.04e-17 84.7
MsG0880046012.01.T01 AT1G16060 76.271 59 14 0 416 474 8 66 1.35e-16 79.0
MsG0880046012.01.T01 AT1G36060 47.945 73 36 1 402 474 133 203 1.96e-11 66.2

Find 114 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAGTAATTTGAATTCT+TGG 0.209522 8:+67617617 MsG0880046012.01.T01:CDS
CAAGAATTCAAATTACTATT+TGG 0.219550 8:-67617616 None:intergenic
AGTAACTATTGTTACTCTTA+TGG 0.248617 8:+67614670 MsG0880046012.01.T01:CDS
AGGAAATCTATTGATACTTT+TGG 0.282332 8:+67615468 MsG0880046012.01.T01:CDS
TTCAACAGCTTCAAAACTAT+TGG 0.285703 8:+67617582 MsG0880046012.01.T01:CDS
ATATATCTATAAACTCTCTT+TGG 0.290703 8:-67614338 None:intergenic
AATATTGGTTCAATGGCTTA+TGG 0.295832 8:+67615288 MsG0880046012.01.T01:CDS
GGAGATATGAAGCTCATCTA+TGG 0.306792 8:+67615651 MsG0880046012.01.T01:CDS
CTTCACCCATGTTTGATTGA+TGG 0.312766 8:-67615146 None:intergenic
GGGACCCTTCACAACATCTT+AGG 0.319809 8:+67617638 MsG0880046012.01.T01:CDS
ATAAGCCATTGAACCAATAT+TGG 0.320548 8:-67615286 None:intergenic
AATTTCAATGCAGAAGAATA+TGG 0.321865 8:+67617315 MsG0880046012.01.T01:CDS
AACCATGAGTTGATGTTAGA+AGG 0.326730 8:+67615090 MsG0880046012.01.T01:CDS
GTTCTTTCATTCTCAAATCT+TGG 0.331942 8:-67617382 None:intergenic
CTGTTGAAGTTGTTGATGTT+GGG 0.335268 8:-67617353 None:intergenic
GATATATTTCATTACATTGC+TGG 0.337570 8:+67614354 MsG0880046012.01.T01:five_prime_UTR
TCTCCTCAAATGAATAATAT+TGG 0.338994 8:+67614544 MsG0880046012.01.T01:CDS
ACATTAACAATGAAAATAAC+TGG 0.340271 8:+67614506 MsG0880046012.01.T01:CDS
AAATAGTAATTTGAATTCTT+GGG 0.341154 8:+67617618 MsG0880046012.01.T01:CDS
GACTTAGTGGTTTAAAGAAC+TGG 0.346259 8:+67615175 MsG0880046012.01.T01:CDS
ATCAGATTTGAGAGGCATAA+TGG 0.354338 8:-67614731 None:intergenic
TCAAGCAGCACTCAAGTATT+GGG 0.359648 8:+67616187 MsG0880046012.01.T01:CDS
CTTGCCATCTTCCATGTTGA+TGG 0.372286 8:-67616660 None:intergenic
GGTAATAAAGATCTATATCT+TGG 0.375013 8:+67616703 MsG0880046012.01.T01:CDS
AAAGAAGGCCAAAGCAGAAA+AGG 0.375414 8:+67615689 MsG0880046012.01.T01:CDS
TGTATCAAATGCTTCTTCAT+TGG 0.379502 8:+67617486 MsG0880046012.01.T01:CDS
TGATGGATCTCTTTATGAAA+TGG 0.383299 8:+67614750 MsG0880046012.01.T01:CDS
TCTGTTGAAGTTGTTGATGT+TGG 0.394185 8:-67617354 None:intergenic
AGCAGAAGCAAATTGTTCAT+AGG 0.397213 8:+67615448 MsG0880046012.01.T01:CDS
GCTGGTTAGATACTTAGATA+TGG 0.409207 8:+67614372 MsG0880046012.01.T01:five_prime_UTR
AACAATGAAAATAACTGGTT+AGG 0.421756 8:+67614511 MsG0880046012.01.T01:CDS
TGGATCCAATATTGGTTCAA+TGG 0.423285 8:+67615281 MsG0880046012.01.T01:CDS
GGTGAAGATCATGGACTTAG+TGG 0.425302 8:+67615162 MsG0880046012.01.T01:CDS
TCAGATTTGAGAGGCATAAT+GGG 0.436788 8:-67614730 None:intergenic
TTTATTAGGCATAGGTGGAC+TGG 0.438736 8:+67615629 MsG0880046012.01.T01:intron
ATCAAGCAGCACTCAAGTAT+TGG 0.444500 8:+67616186 MsG0880046012.01.T01:CDS
ACACCAATATTATTCATTTG+AGG 0.447211 8:-67614547 None:intergenic
TATAATATGACAACTGTTGT+TGG 0.447627 8:-67615053 None:intergenic
TCAACATTGAACAAGCTAGA+AGG 0.451377 8:+67617203 MsG0880046012.01.T01:CDS
GGTGAATGTGGATCCAATAT+TGG 0.454709 8:+67615273 MsG0880046012.01.T01:CDS
GAGGGACAATATGTAAGAAA+TGG 0.454968 8:+67617796 MsG0880046012.01.T01:three_prime_UTR
GATGGGAGATAGTAAAATTG+AGG 0.459317 8:+67617820 MsG0880046012.01.T01:three_prime_UTR
GGAAGATGGCAAGCTCGAAT+TGG 0.460222 8:+67616670 MsG0880046012.01.T01:CDS
CCTTGTTACTCCTCTGTACA+TGG 0.462036 8:-67616521 None:intergenic
ACAAGCTTGCAAAATCTCTC+TGG 0.463000 8:+67617550 MsG0880046012.01.T01:CDS
TGTTGAAAATTCTGTTGCTA+TGG 0.468546 8:+67615395 MsG0880046012.01.T01:CDS
TGTGATAGAGAACAAAAGAA+AGG 0.478820 8:-67617717 None:intergenic
TCAAACATGGGTGAAGATCA+TGG 0.480026 8:+67615153 MsG0880046012.01.T01:CDS
CAAAGAACATCTCAATATAG+AGG 0.486736 8:+67615492 MsG0880046012.01.T01:CDS
ATGAAATGGAAGCTCTTAGC+AGG 0.491080 8:+67614764 MsG0880046012.01.T01:CDS
AATATGTTGCTCATTTAAGA+AGG 0.492255 8:+67616396 MsG0880046012.01.T01:CDS
GAGAGAAAATATGAAGAGAA+TGG 0.493769 8:+67614462 MsG0880046012.01.T01:exon
CAAAGCAGAAAAGGAAGACA+AGG 0.499730 8:+67615698 MsG0880046012.01.T01:CDS
CTGGCATCTGAGGCAAAGAA+AGG 0.499839 8:-67617666 None:intergenic
GCTCGAATTGGTAGAGTAGC+TGG 0.499873 8:+67616682 MsG0880046012.01.T01:CDS
GAGTAACAATAGTTACTAAG+AGG 0.502157 8:-67614664 None:intergenic
TGATCATGTCCATGACTAGC+TGG 0.509563 8:-67615213 None:intergenic
ATGGGAGATAGTAAAATTGA+GGG 0.510372 8:+67617821 MsG0880046012.01.T01:three_prime_UTR
GGACTTGAACATGAAAATGC+TGG 0.514334 8:+67614691 MsG0880046012.01.T01:CDS
GTGATAGAGAACAAAAGAAA+GGG 0.521763 8:-67617716 None:intergenic
TTGTTGTCATATGCAGAAGA+AGG 0.522088 8:-67617277 None:intergenic
TAGCTTGTTCAATGTTGAGA+AGG 0.523772 8:-67617198 None:intergenic
AATGAAGAATATGACAAGAC+AGG 0.524291 8:+67616373 MsG0880046012.01.T01:CDS
TTATTAGGCATAGGTGGACT+GGG 0.524849 8:+67615630 MsG0880046012.01.T01:intron
TGGTAAAAGCTTGCTTGAAG+TGG 0.527376 8:-67614634 None:intergenic
GCAGAAGCAGAAGCAGAAGA+AGG 0.529348 8:-67614598 None:intergenic
GTACTACTACATGCATAATG+AGG 0.531601 8:-67614961 None:intergenic
ATTATGCCTCTCAAATCTGA+TGG 0.532902 8:+67614733 MsG0880046012.01.T01:CDS
AAGCAAAGTCAAACTTCAAG+TGG 0.535525 8:+67615117 MsG0880046012.01.T01:CDS
GACACCATCAACATGGAAGA+TGG 0.537820 8:+67616656 MsG0880046012.01.T01:CDS
ACCCTTCTAACATCAACTCA+TGG 0.539230 8:-67615092 None:intergenic
ACCATGAGTTGATGTTAGAA+GGG 0.549490 8:+67615091 MsG0880046012.01.T01:CDS
TACTACTACATGCATAATGA+GGG 0.551148 8:-67614960 None:intergenic
GCTATGGATACAAAGAAAAG+AGG 0.553448 8:+67615411 MsG0880046012.01.T01:CDS
AATTGTTTATTAGGCATAGG+TGG 0.555057 8:+67615624 MsG0880046012.01.T01:intron
TGGCATCTGAGGCAAAGAAA+GGG 0.555089 8:-67617665 None:intergenic
GATGATTGTTCCTGTTGTAG+AGG 0.558499 8:+67615242 MsG0880046012.01.T01:CDS
TTGAAGTTGTTGATGTTGGG+AGG 0.565145 8:-67617350 None:intergenic
ACTTAGTGGTTTAAAGAACT+GGG 0.566240 8:+67615176 MsG0880046012.01.T01:CDS
GACAACAGTTGCAAGAAAGA+AGG 0.566962 8:+67615674 MsG0880046012.01.T01:CDS
CAATATGTAAGAAATGGTGA+TGG 0.568192 8:+67617802 MsG0880046012.01.T01:three_prime_UTR
AAATTTCCATCAATCAAACA+TGG 0.572921 8:+67615140 MsG0880046012.01.T01:CDS
GGGAAGTTTATGTGAGTGGA+TGG 0.574919 8:-67616212 None:intergenic
AACAGGGAAGTTTATGTGAG+TGG 0.577161 8:-67616216 None:intergenic
ACACAGCTAGACTGAGAGCT+AGG 0.578119 8:-67615342 None:intergenic
GAGATATGAAGCTCATCTAT+GGG 0.580404 8:+67615652 MsG0880046012.01.T01:CDS
AATATGTAAGAAATGGTGAT+GGG 0.581590 8:+67617803 MsG0880046012.01.T01:three_prime_UTR
AGTTTGAGCAGTTCAAGAGA+AGG 0.582795 8:+67617514 MsG0880046012.01.T01:CDS
GAAGGCCTAAGATGTTGTGA+AGG 0.585697 8:-67617643 None:intergenic
GAGGAAAATGAAGGTGAATG+TGG 0.588553 8:+67615261 MsG0880046012.01.T01:CDS
AAAAGCAGTGGATTCTCAAG+AGG 0.594604 8:+67616493 MsG0880046012.01.T01:CDS
AAAGCAGTGGATTCTCAAGA+GGG 0.594710 8:+67616494 MsG0880046012.01.T01:CDS
CTCAATATAGAGGTGTAACA+AGG 0.612520 8:+67615502 MsG0880046012.01.T01:CDS
GTTTCATCAAGAAGTAGTTG+AGG 0.620030 8:+67617441 MsG0880046012.01.T01:CDS
AACATGCTGTCTAAGCTCAA+AGG 0.623476 8:-67615000 None:intergenic
AAATTATCAAAATCAACTTG+AGG 0.631469 8:+67616349 MsG0880046012.01.T01:CDS
GGTAGCAGACACCATCAACA+TGG 0.639807 8:+67616649 MsG0880046012.01.T01:intron
CCATGTACAGAGGAGTAACA+AGG 0.640756 8:+67616521 MsG0880046012.01.T01:CDS
ATTGCAGCTATAAAATTCAG+AGG 0.642745 8:+67617109 MsG0880046012.01.T01:CDS
AATTTCCATCAATCAAACAT+GGG 0.644018 8:+67615141 MsG0880046012.01.T01:CDS
ATCTGAGGCAAAGAAAGGGA+AGG 0.647053 8:-67617661 None:intergenic
AGTTACTAAGAGGAGAAGAG+TGG 0.647916 8:-67614654 None:intergenic
AAGGCCTAAGATGTTGTGAA+GGG 0.651408 8:-67617642 None:intergenic
CCTGTTGTAGAGGAAAATGA+AGG 0.654487 8:+67615252 MsG0880046012.01.T01:CDS
CAAGCAGCACTCAAGTATTG+GGG 0.655625 8:+67616188 MsG0880046012.01.T01:CDS
AGAGATCCATCAGATTTGAG+AGG 0.660630 8:-67614739 None:intergenic
CTTAGCAGGTCACAAACACA+AGG 0.664909 8:+67614778 MsG0880046012.01.T01:CDS
AGCTAGAAGGAACAAAGAGG+TGG 0.670383 8:+67617216 MsG0880046012.01.T01:CDS
AAGCAGTGGATTCTCAAGAG+GGG 0.699895 8:+67616495 MsG0880046012.01.T01:CDS
AGAGGGGCTTCCATGTACAG+AGG 0.703240 8:+67616511 MsG0880046012.01.T01:CDS
AGCAGATGACATATTCTGTG+AGG 0.705618 8:-67615370 None:intergenic
ACTACTACATGCATAATGAG+GGG 0.710323 8:-67614959 None:intergenic
ACAAGCTAGAAGGAACAAAG+AGG 0.715606 8:+67617213 MsG0880046012.01.T01:CDS
CATGTTATCCAAAGACACTG+AGG 0.754091 8:-67617419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATTAATTATATTTAA+TGG - Chr8:67616579-67616598 None:intergenic 0.0%
!!! ATATTTTATTATATCAAAGT+TGG - Chr8:67617149-67617168 None:intergenic 10.0%
!! AAATAGTAATTTGAATTCTT+GGG + Chr8:67617618-67617637 MsG0880046012.01.T01:CDS 15.0%
!! AGTACATTACAATATTAAAT+TGG - Chr8:67616786-67616805 None:intergenic 15.0%
!! CAATTAATAAACCTTATAAA+TGG - Chr8:67616287-67616306 None:intergenic 15.0%
!!! ATTCCAAAATTTTGATTTTA+GGG + Chr8:67616126-67616145 MsG0880046012.01.T01:intron 15.0%
!!! TATGTTTTGAATTGTTTATT+AGG + Chr8:67615615-67615634 MsG0880046012.01.T01:intron 15.0%
!!! TTTTGACAAAAACTATATTT+TGG - Chr8:67615777-67615796 None:intergenic 15.0%
!! AAATTATCAAAATCAACTTG+AGG + Chr8:67616349-67616368 MsG0880046012.01.T01:CDS 20.0%
!! AACAAAATACAAAATGAGAA+TGG - Chr8:67615929-67615948 None:intergenic 20.0%
!! ACATTAACAATGAAAATAAC+TGG + Chr8:67614506-67614525 MsG0880046012.01.T01:CDS 20.0%
!! ATATATCTATAAACTCTCTT+TGG - Chr8:67614341-67614360 None:intergenic 20.0%
!! ATATGATGTTGAAAAAATCA+TGG + Chr8:67617165-67617184 MsG0880046012.01.T01:CDS 20.0%
!! ATTATGTGTGTATTAATGTA+TGG + Chr8:67614823-67614842 MsG0880046012.01.T01:intron 20.0%
!! CAAATAGTAATTTGAATTCT+TGG + Chr8:67617617-67617636 MsG0880046012.01.T01:CDS 20.0%
!! CAAGAATTCAAATTACTATT+TGG - Chr8:67617619-67617638 None:intergenic 20.0%
!! CACAAAAATAGATAAAAAGT+GGG - Chr8:67614876-67614895 None:intergenic 20.0%
!! TCACAAAAATAGATAAAAAG+TGG - Chr8:67614877-67614896 None:intergenic 20.0%
!! TTGTTTCAATTCCATTTATA+AGG + Chr8:67616273-67616292 MsG0880046012.01.T01:intron 20.0%
!!! AATGATTGTTATTACTAACA+GGG - Chr8:67616235-67616254 None:intergenic 20.0%
!!! CATTCCAAAATTTTGATTTT+AGG + Chr8:67616125-67616144 MsG0880046012.01.T01:intron 20.0%
!!! CTTGGATTATATTTTTACTT+GGG - Chr8:67617004-67617023 None:intergenic 20.0%
!!! TAATGATTGTTATTACTAAC+AGG - Chr8:67616236-67616255 None:intergenic 20.0%
!!! TTCCAAAATTTTGATTTTAG+GGG + Chr8:67616127-67616146 MsG0880046012.01.T01:intron 20.0%
!!! TTTTTAGGTAATGAAACTAT+GGG + Chr8:67614934-67614953 MsG0880046012.01.T01:CDS 20.0%
!!! TTTTTTAGGTAATGAAACTA+TGG + Chr8:67614933-67614952 MsG0880046012.01.T01:CDS 20.0%
! AAATTTCCATCAATCAAACA+TGG + Chr8:67615140-67615159 MsG0880046012.01.T01:CDS 25.0%
! AACAATGAAAATAACTGGTT+AGG + Chr8:67614511-67614530 MsG0880046012.01.T01:CDS 25.0%
! AATATGTAAGAAATGGTGAT+GGG + Chr8:67617803-67617822 MsG0880046012.01.T01:three_prime_UTR 25.0%
! AATATGTTGCTCATTTAAGA+AGG + Chr8:67616396-67616415 MsG0880046012.01.T01:CDS 25.0%
! AATGATACTATGTGAACATT+TGG + Chr8:67615725-67615744 MsG0880046012.01.T01:intron 25.0%
! AATTTCAATGCAGAAGAATA+TGG + Chr8:67617315-67617334 MsG0880046012.01.T01:CDS 25.0%
! AATTTCCATCAATCAAACAT+GGG + Chr8:67615141-67615160 MsG0880046012.01.T01:CDS 25.0%
! ACACCAATATTATTCATTTG+AGG - Chr8:67614550-67614569 None:intergenic 25.0%
! AGTAACTATTGTTACTCTTA+TGG + Chr8:67614670-67614689 MsG0880046012.01.T01:CDS 25.0%
! CCAAGTAAAAATATAATCCA+AGG + Chr8:67617002-67617021 MsG0880046012.01.T01:intron 25.0%
! GATATATTTCATTACATTGC+TGG + Chr8:67614354-67614373 MsG0880046012.01.T01:five_prime_UTR 25.0%
! GGTAATAAAGATCTATATCT+TGG + Chr8:67616703-67616722 MsG0880046012.01.T01:CDS 25.0%
! TATAATATGACAACTGTTGT+TGG - Chr8:67615056-67615075 None:intergenic 25.0%
! TCTCCTCAAATGAATAATAT+TGG + Chr8:67614544-67614563 MsG0880046012.01.T01:CDS 25.0%
! TTAAATTGGTACATGATCAA+TGG - Chr8:67616772-67616791 None:intergenic 25.0%
! TTGAATTGTTTATTAGGCAT+AGG + Chr8:67615621-67615640 MsG0880046012.01.T01:intron 25.0%
! TTTCATTCTCTTATAACAGT+TGG + Chr8:67616325-67616344 MsG0880046012.01.T01:intron 25.0%
!! AGGAAATCTATTGATACTTT+TGG + Chr8:67615468-67615487 MsG0880046012.01.T01:CDS 25.0%
!! CTCATTGAAATGAAACTTTT+AGG + Chr8:67617055-67617074 MsG0880046012.01.T01:intron 25.0%
!!! CCAAAACTAGAGAATTTTTT+AGG + Chr8:67614919-67614938 MsG0880046012.01.T01:CDS 25.0%
!!! CCTAAAAAATTCTCTAGTTT+TGG - Chr8:67614922-67614941 None:intergenic 25.0%
!!! CCTTGGATTATATTTTTACT+TGG - Chr8:67617005-67617024 None:intergenic 25.0%
!!! TCCAAAATTTTGATTTTAGG+GGG + Chr8:67616128-67616147 MsG0880046012.01.T01:intron 25.0%
!!! TCTTTCTTTTACTTTTTGCA+TGG + Chr8:67617774-67617793 MsG0880046012.01.T01:three_prime_UTR 25.0%
!!! TGTTTTGTTGGATATGATTT+TGG - Chr8:67615026-67615045 None:intergenic 25.0%
!!! TTGCTTATGTTTTTAACATG+AGG + Chr8:67616081-67616100 MsG0880046012.01.T01:intron 25.0%
!!! TTTGTTATTAGATTCTGTCT+TGG + Chr8:67616051-67616070 MsG0880046012.01.T01:intron 25.0%
!!! TTTTAGGTAATGAAACTATG+GGG + Chr8:67614935-67614954 MsG0880046012.01.T01:CDS 25.0%
AATGAAGAATATGACAAGAC+AGG + Chr8:67616373-67616392 MsG0880046012.01.T01:CDS 30.0%
AATTGTTTATTAGGCATAGG+TGG + Chr8:67615624-67615643 MsG0880046012.01.T01:intron 30.0%
ACTTAGTGGTTTAAAGAACT+GGG + Chr8:67615176-67615195 MsG0880046012.01.T01:CDS 30.0%
ATAAGCCATTGAACCAATAT+TGG - Chr8:67615289-67615308 None:intergenic 30.0%
ATGGGAGATAGTAAAATTGA+GGG + Chr8:67617821-67617840 MsG0880046012.01.T01:three_prime_UTR 30.0%
ATTGCAGCTATAAAATTCAG+AGG + Chr8:67617109-67617128 MsG0880046012.01.T01:CDS 30.0%
CAAAGAACATCTCAATATAG+AGG + Chr8:67615492-67615511 MsG0880046012.01.T01:CDS 30.0%
CAATATGTAAGAAATGGTGA+TGG + Chr8:67617802-67617821 MsG0880046012.01.T01:three_prime_UTR 30.0%
CTTTCAAAATCTTGTTCACT+TGG + Chr8:67616628-67616647 MsG0880046012.01.T01:intron 30.0%
GAGAGAAAATATGAAGAGAA+TGG + Chr8:67614462-67614481 MsG0880046012.01.T01:exon 30.0%
GAGTAACAATAGTTACTAAG+AGG - Chr8:67614667-67614686 None:intergenic 30.0%
GTGATAGAGAACAAAAGAAA+GGG - Chr8:67617719-67617738 None:intergenic 30.0%
GTTCTTTCATTCTCAAATCT+TGG - Chr8:67617385-67617404 None:intergenic 30.0%
TACTACTACATGCATAATGA+GGG - Chr8:67614963-67614982 None:intergenic 30.0%
TGGAATTGAAACAAAAGACA+TGG - Chr8:67616267-67616286 None:intergenic 30.0%
TGTATCAAATGCTTCTTCAT+TGG + Chr8:67617486-67617505 MsG0880046012.01.T01:CDS 30.0%
TGTGATAGAGAACAAAAGAA+AGG - Chr8:67617720-67617739 None:intergenic 30.0%
TGTTGAAAATTCTGTTGCTA+TGG + Chr8:67615395-67615414 MsG0880046012.01.T01:CDS 30.0%
TTCAACAGCTTCAAAACTAT+TGG + Chr8:67617582-67617601 MsG0880046012.01.T01:CDS 30.0%
! ACCCCCTAAAATCAAAATTT+TGG - Chr8:67616132-67616151 None:intergenic 30.0%
! GTTTAAAGAACTGGGTTTTA+AGG + Chr8:67615184-67615203 MsG0880046012.01.T01:CDS 30.0%
! TGATGGATCTCTTTATGAAA+TGG + Chr8:67614750-67614769 MsG0880046012.01.T01:CDS 30.0%
! TTTAACTTTCATGCTAACCT+TGG - Chr8:67617022-67617041 None:intergenic 30.0%
! TTTTATAGCTGCAATGTCAT+AGG - Chr8:67617104-67617123 None:intergenic 30.0%
!! AATATTGGTTCAATGGCTTA+TGG + Chr8:67615288-67615307 MsG0880046012.01.T01:CDS 30.0%
!! AATTTTGATCCCACAAACAT+TGG - Chr8:67616980-67616999 None:intergenic 30.0%
!!! AATAGTTTTGAAGCTGTTGA+AGG - Chr8:67617583-67617602 None:intergenic 30.0%
!!! TCTTTTACTTTTTGCATGGA+GGG + Chr8:67617778-67617797 MsG0880046012.01.T01:three_prime_UTR 30.0%
!!! TGTTTTTTGCTTTCTTTGCT+TGG + Chr8:67615945-67615964 MsG0880046012.01.T01:intron 30.0%
!!! TTCTTTTACTTTTTGCATGG+AGG + Chr8:67617777-67617796 MsG0880046012.01.T01:three_prime_UTR 30.0%
AAGCAAAGTCAAACTTCAAG+TGG + Chr8:67615117-67615136 MsG0880046012.01.T01:CDS 35.0%
ACTACTACATGCATAATGAG+GGG - Chr8:67614962-67614981 None:intergenic 35.0%
AGCAGAAGCAAATTGTTCAT+AGG + Chr8:67615448-67615467 MsG0880046012.01.T01:CDS 35.0%
ATGTTCTGTTCCAATGTTTG+TGG + Chr8:67616967-67616986 MsG0880046012.01.T01:intron 35.0%
ATTATGCCTCTCAAATCTGA+TGG + Chr8:67614733-67614752 MsG0880046012.01.T01:CDS 35.0%
CTGTTGAAGTTGTTGATGTT+GGG - Chr8:67617356-67617375 None:intergenic 35.0%
GACTTAGTGGTTTAAAGAAC+TGG + Chr8:67615175-67615194 MsG0880046012.01.T01:CDS 35.0%
GAGATATGAAGCTCATCTAT+GGG + Chr8:67615652-67615671 MsG0880046012.01.T01:CDS 35.0%
GAGGGACAATATGTAAGAAA+TGG + Chr8:67617796-67617815 MsG0880046012.01.T01:three_prime_UTR 35.0%
GATCTTATCAGAAAAAGCAG+TGG + Chr8:67616481-67616500 MsG0880046012.01.T01:intron 35.0%
GATGGGAGATAGTAAAATTG+AGG + Chr8:67617820-67617839 MsG0880046012.01.T01:three_prime_UTR 35.0%
GCTATGGATACAAAGAAAAG+AGG + Chr8:67615411-67615430 MsG0880046012.01.T01:CDS 35.0%
GCTGGTTAGATACTTAGATA+TGG + Chr8:67614372-67614391 MsG0880046012.01.T01:five_prime_UTR 35.0%
GTACTACTACATGCATAATG+AGG - Chr8:67614964-67614983 None:intergenic 35.0%
GTGAGTTCTTTCATACTCTT+TGG + Chr8:67616734-67616753 MsG0880046012.01.T01:intron 35.0%
GTTTCATCAAGAAGTAGTTG+AGG + Chr8:67617441-67617460 MsG0880046012.01.T01:CDS 35.0%
TCAACATTGAACAAGCTAGA+AGG + Chr8:67617203-67617222 MsG0880046012.01.T01:CDS 35.0%
TCTGTTGAAGTTGTTGATGT+TGG - Chr8:67617357-67617376 None:intergenic 35.0%
TGATGAGACACAGTTTATCT+TGG + Chr8:67615996-67616015 MsG0880046012.01.T01:intron 35.0%
TGTAATGTACTAGACACATG+TGG + Chr8:67616795-67616814 MsG0880046012.01.T01:intron 35.0%
TGTTCTGTTCCAATGTTTGT+GGG + Chr8:67616968-67616987 MsG0880046012.01.T01:intron 35.0%
TTGTTGTCATATGCAGAAGA+AGG - Chr8:67617280-67617299 None:intergenic 35.0%
! ATCAGATTTGAGAGGCATAA+TGG - Chr8:67614734-67614753 None:intergenic 35.0%
! CTCAATATAGAGGTGTAACA+AGG + Chr8:67615502-67615521 MsG0880046012.01.T01:CDS 35.0%
! GTTGGTTGTTCATGTTTTGT+TGG - Chr8:67615038-67615057 None:intergenic 35.0%
! TCAGATTTGAGAGGCATAAT+GGG - Chr8:67614733-67614752 None:intergenic 35.0%
! TTTTTGCTTTCTTTGCTTGG+CGG + Chr8:67615948-67615967 MsG0880046012.01.T01:intron 35.0%
!! AACCATGAGTTGATGTTAGA+AGG + Chr8:67615090-67615109 MsG0880046012.01.T01:CDS 35.0%
!! AACTTTTTCCTCAGTGTCTT+TGG + Chr8:67617411-67617430 MsG0880046012.01.T01:CDS 35.0%
!! ACCATGAGTTGATGTTAGAA+GGG + Chr8:67615091-67615110 MsG0880046012.01.T01:CDS 35.0%
!! GAAACTTTTAGGTACTCAAG+AGG + Chr8:67617066-67617085 MsG0880046012.01.T01:intron 35.0%
!! GATTTTAGGGGGTTATGATA+TGG + Chr8:67616139-67616158 MsG0880046012.01.T01:intron 35.0%
!! TAGCTTGTTCAATGTTGAGA+AGG - Chr8:67617201-67617220 None:intergenic 35.0%
!! TGGATCCAATATTGGTTCAA+TGG + Chr8:67615281-67615300 MsG0880046012.01.T01:CDS 35.0%
!! TTTTGCAAGCTTGTTCTATC+TGG - Chr8:67617544-67617563 None:intergenic 35.0%
AAAGAAGGCCAAAGCAGAAA+AGG + Chr8:67615689-67615708 MsG0880046012.01.T01:CDS 40.0%
AACAGGGAAGTTTATGTGAG+TGG - Chr8:67616219-67616238 None:intergenic 40.0%
AACATGCTGTCTAAGCTCAA+AGG - Chr8:67615003-67615022 None:intergenic 40.0%
AAGGCCTAAGATGTTGTGAA+GGG - Chr8:67617645-67617664 None:intergenic 40.0%
ACAAGCTAGAAGGAACAAAG+AGG + Chr8:67617213-67617232 MsG0880046012.01.T01:CDS 40.0%
ACAAGCTTGCAAAATCTCTC+TGG + Chr8:67617550-67617569 MsG0880046012.01.T01:CDS 40.0%
ACCCTTCTAACATCAACTCA+TGG - Chr8:67615095-67615114 None:intergenic 40.0%
AGAGATCCATCAGATTTGAG+AGG - Chr8:67614742-67614761 None:intergenic 40.0%
AGCAGATGACATATTCTGTG+AGG - Chr8:67615373-67615392 None:intergenic 40.0%
AGTTACTAAGAGGAGAAGAG+TGG - Chr8:67614657-67614676 None:intergenic 40.0%
AGTTTGAGCAGTTCAAGAGA+AGG + Chr8:67617514-67617533 MsG0880046012.01.T01:CDS 40.0%
ATCAAGCAGCACTCAAGTAT+TGG + Chr8:67616186-67616205 MsG0880046012.01.T01:CDS 40.0%
ATGAAATGGAAGCTCTTAGC+AGG + Chr8:67614764-67614783 MsG0880046012.01.T01:CDS 40.0%
CAAAGCAGAAAAGGAAGACA+AGG + Chr8:67615698-67615717 MsG0880046012.01.T01:CDS 40.0%
CATGTTATCCAAAGACACTG+AGG - Chr8:67617422-67617441 None:intergenic 40.0%
CATTAGACATGACACTGACA+CGG - Chr8:67616858-67616877 None:intergenic 40.0%
CCTGTTGTAGAGGAAAATGA+AGG + Chr8:67615252-67615271 MsG0880046012.01.T01:CDS 40.0%
CTTCACCCATGTTTGATTGA+TGG - Chr8:67615149-67615168 None:intergenic 40.0%
GACAACAGTTGCAAGAAAGA+AGG + Chr8:67615674-67615693 MsG0880046012.01.T01:CDS 40.0%
GAGGAAAATGAAGGTGAATG+TGG + Chr8:67615261-67615280 MsG0880046012.01.T01:CDS 40.0%
GATGATTGTTCCTGTTGTAG+AGG + Chr8:67615242-67615261 MsG0880046012.01.T01:CDS 40.0%
GGACTTGAACATGAAAATGC+TGG + Chr8:67614691-67614710 MsG0880046012.01.T01:CDS 40.0%
GGAGATATGAAGCTCATCTA+TGG + Chr8:67615651-67615670 MsG0880046012.01.T01:CDS 40.0%
GGTGAATGTGGATCCAATAT+TGG + Chr8:67615273-67615292 MsG0880046012.01.T01:CDS 40.0%
TCAAACATGGGTGAAGATCA+TGG + Chr8:67615153-67615172 MsG0880046012.01.T01:CDS 40.0%
TCAAGCAGCACTCAAGTATT+GGG + Chr8:67616187-67616206 MsG0880046012.01.T01:CDS 40.0%
TTGAAGTTGTTGATGTTGGG+AGG - Chr8:67617353-67617372 None:intergenic 40.0%
TTTATTAGGCATAGGTGGAC+TGG + Chr8:67615629-67615648 MsG0880046012.01.T01:intron 40.0%
! AAAAGCAGTGGATTCTCAAG+AGG + Chr8:67616493-67616512 MsG0880046012.01.T01:CDS 40.0%
! AAAGCAGTGGATTCTCAAGA+GGG + Chr8:67616494-67616513 MsG0880046012.01.T01:CDS 40.0%
! AGGAATTTTCCAGCTAGTCA+TGG + Chr8:67615204-67615223 MsG0880046012.01.T01:CDS 40.0%
! CCTTCATTTTCCTCTACAAC+AGG - Chr8:67615255-67615274 None:intergenic 40.0%
! CTTGTCTTCCTTTTCTGCTT+TGG - Chr8:67615700-67615719 None:intergenic 40.0%
! GAGGAGTAACAAGGTCTTAT+AGG + Chr8:67616530-67616549 MsG0880046012.01.T01:intron 40.0%
! GGATTCACACGATGATTTTG+CGG + Chr8:67615746-67615765 MsG0880046012.01.T01:intron 40.0%
! TGGTAAAAGCTTGCTTGAAG+TGG - Chr8:67614637-67614656 None:intergenic 40.0%
! TTATTAGGCATAGGTGGACT+GGG + Chr8:67615630-67615649 MsG0880046012.01.T01:intron 40.0%
! TTTTGCTTTCTTTGCTTGGC+GGG + Chr8:67615949-67615968 MsG0880046012.01.T01:intron 40.0%
AGCTAGAAGGAACAAAGAGG+TGG + Chr8:67617216-67617235 MsG0880046012.01.T01:CDS 45.0%
CCATGTACAGAGGAGTAACA+AGG + Chr8:67616521-67616540 MsG0880046012.01.T01:CDS 45.0%
CCTTGTTACTCCTCTGTACA+TGG - Chr8:67616524-67616543 None:intergenic 45.0%
CTTAGCAGGTCACAAACACA+AGG + Chr8:67614778-67614797 MsG0880046012.01.T01:CDS 45.0%
CTTGCCATCTTCCATGTTGA+TGG - Chr8:67616663-67616682 None:intergenic 45.0%
GAAGGCCTAAGATGTTGTGA+AGG - Chr8:67617646-67617665 None:intergenic 45.0%
GACACCATCAACATGGAAGA+TGG + Chr8:67616656-67616675 MsG0880046012.01.T01:CDS 45.0%
GGGAAGTTTATGTGAGTGGA+TGG - Chr8:67616215-67616234 None:intergenic 45.0%
GGTGAAGATCATGGACTTAG+TGG + Chr8:67615162-67615181 MsG0880046012.01.T01:CDS 45.0%
TATACGCGCACAACTACTAG+CGG - Chr8:67616923-67616942 None:intergenic 45.0%
TCTGTCCATGCTGCAAAAAC+TGG - Chr8:67617688-67617707 None:intergenic 45.0%
TGATCATGTCCATGACTAGC+TGG - Chr8:67615216-67615235 None:intergenic 45.0%
TTTGCTTTCTTTGCTTGGCG+GGG + Chr8:67615950-67615969 MsG0880046012.01.T01:intron 45.0%
! AAGCAGTGGATTCTCAAGAG+GGG + Chr8:67616495-67616514 MsG0880046012.01.T01:CDS 45.0%
! AGATGCCAGTTTTTGCAGCA+TGG + Chr8:67617680-67617699 MsG0880046012.01.T01:CDS 45.0%
! ATCTGAGGCAAAGAAAGGGA+AGG - Chr8:67617664-67617683 None:intergenic 45.0%
! CAAGCAGCACTCAAGTATTG+GGG + Chr8:67616188-67616207 MsG0880046012.01.T01:CDS 45.0%
! TCACACGATGATTTTGCGGA+CGG + Chr8:67615750-67615769 MsG0880046012.01.T01:intron 45.0%
! TGGCATCTGAGGCAAAGAAA+GGG - Chr8:67617668-67617687 None:intergenic 45.0%
ACACAGCTAGACTGAGAGCT+AGG - Chr8:67615345-67615364 None:intergenic 50.0%
GCAGAAGCAGAAGCAGAAGA+AGG - Chr8:67614601-67614620 None:intergenic 50.0%
GCTCGAATTGGTAGAGTAGC+TGG + Chr8:67616682-67616701 MsG0880046012.01.T01:CDS 50.0%
GCTGCAAAAACTGGCATCTG+AGG - Chr8:67617679-67617698 None:intergenic 50.0%
GGAAGATGGCAAGCTCGAAT+TGG + Chr8:67616670-67616689 MsG0880046012.01.T01:CDS 50.0%
GGGACCCTTCACAACATCTT+AGG + Chr8:67617638-67617657 MsG0880046012.01.T01:CDS 50.0%
GGTAGCAGACACCATCAACA+TGG + Chr8:67616649-67616668 MsG0880046012.01.T01:intron 50.0%
! CTGGCATCTGAGGCAAAGAA+AGG - Chr8:67617669-67617688 None:intergenic 50.0%
AGAGGGGCTTCCATGTACAG+AGG + Chr8:67616511-67616530 MsG0880046012.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 67614329 67617848 67614329 ID=MsG0880046012.01;Name=MsG0880046012.01
Chr8 mRNA 67614329 67617848 67614329 ID=MsG0880046012.01.T01;Parent=MsG0880046012.01;Name=MsG0880046012.01.T01;_AED=0.46;_eAED=0.46;_QI=143|0.71|0.75|1|1|1|8|134|655
Chr8 exon 67614329 67614799 67614329 ID=MsG0880046012.01.T01:exon:612;Parent=MsG0880046012.01.T01
Chr8 exon 67614899 67615523 67614899 ID=MsG0880046012.01.T01:exon:613;Parent=MsG0880046012.01.T01
Chr8 exon 67615637 67615719 67615637 ID=MsG0880046012.01.T01:exon:614;Parent=MsG0880046012.01.T01
Chr8 exon 67616147 67616235 67616147 ID=MsG0880046012.01.T01:exon:615;Parent=MsG0880046012.01.T01
Chr8 exon 67616344 67616417 67616344 ID=MsG0880046012.01.T01:exon:616;Parent=MsG0880046012.01.T01
Chr8 exon 67616492 67616542 67616492 ID=MsG0880046012.01.T01:exon:617;Parent=MsG0880046012.01.T01
Chr8 exon 67616654 67616733 67616654 ID=MsG0880046012.01.T01:exon:618;Parent=MsG0880046012.01.T01
Chr8 exon 67617077 67617848 67617077 ID=MsG0880046012.01.T01:exon:619;Parent=MsG0880046012.01.T01
Chr8 five_prime_UTR 67614329 67614471 67614329 ID=MsG0880046012.01.T01:five_prime_utr;Parent=MsG0880046012.01.T01
Chr8 CDS 67614472 67614799 67614472 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67614899 67615523 67614899 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67615637 67615719 67615637 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67616147 67616235 67616147 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67616344 67616417 67616344 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67616492 67616542 67616492 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67616654 67616733 67616654 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 CDS 67617077 67617714 67617077 ID=MsG0880046012.01.T01:cds;Parent=MsG0880046012.01.T01
Chr8 three_prime_UTR 67617715 67617848 67617715 ID=MsG0880046012.01.T01:three_prime_utr;Parent=MsG0880046012.01.T01
Gene Sequence

>MsG0880046012.01.T01

ATGAAGAGAATGGAAAACAATGATGATAGTGTTGACATTAACAATGAAAATAACTGGTTAGGTTTTTCACTCTCTCCTCAAATGAATAATATTGGTGTTACTTCACACACTCATCATCATTCACTGCCTTCTTCTGCTTCTGCTTCTGCTTCTGAAGTAGTTCCACTTCAAGCAAGCTTTTACCACTCTTCTCCTCTTAGTAACTATTGTTACTCTTATGGACTTGAACATGAAAATGCTGGCTTGTATTCATTACTTCCCATTATGCCTCTCAAATCTGATGGATCTCTTTATGAAATGGAAGCTCTTAGCAGGTCACAAACACAAGCAATGAGTACTACTTCAGCACCAAAACTAGAGAATTTTTTAGGTAATGAAACTATGGGGACCCCTCATTATGCATGTAGTAGTACTGTCACAGAAACAATGCCTTTGAGCTTAGACAGCATGTTCCAAAATCATATCCAACAAAACATGAACAACCAACAACAGTTGTCATATTATAACTCAACTTTGAGAAACCATGAGTTGATGTTAGAAGGGTCAAAGCAAAGTCAAACTTCAAGTGGAAATTTCCATCAATCAAACATGGGTGAAGATCATGGACTTAGTGGTTTAAAGAACTGGGTTTTAAGGAATTTTCCAGCTAGTCATGGACATGATCAGTCAAAGATGATTGTTCCTGTTGTAGAGGAAAATGAAGGTGAATGTGGATCCAATATTGGTTCAATGGCTTATGGAGATTTGCATTCTTTGAGTTTGTCAATGAGTCCTAGCTCTCAGTCTAGCTGTGTTACAACCTCACAGAATATGTCATCTGCTGTTGTTGAAAATTCTGTTGCTATGGATACAAAGAAAAGAGGAAGTGAAAAATTTGAGCAGAAGCAAATTGTTCATAGGAAATCTATTGATACTTTTGGTCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGGAGATATGAAGCTCATCTATGGGACAACAGTTGCAAGAAAGAAGGCCAAAGCAGAAAAGGAAGACAAGGGGGTTATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATCAAGCAGCACTCAAGTATTGGGGACCATCCACTCACATAAACTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAATATGACAAGACAGGAATATGTTGCTCATTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGCAGACACCATCAACATGGAAGATGGCAAGCTCGAATTGGTAGAGTAGCTGGTAATAAAGATCTATATCTTGGAACTTTCAGTACTCAAGAGGAAGCAGCTGAAGCCTATGACATTGCAGCTATAAAATTCAGAGGAGCAAATGCAGTGACCAACTTTGATATAATAAAATATGATGTTGAAAAAATCATGGCTAGTAGTAACCTTCTCAACATTGAACAAGCTAGAAGGAACAAAGAGGTGGTAGATATGAGTACAACTCAATACATTGATCAAAACAAGCCTTCTTCTGCATATGACAACAATAGCACTCAAGAAGCAATTTCAATGCAGAAGAATATGGTTCTGTATCAATCCTCCCAACATCAACAACTTCAACAGAATCAACCAAGATTTGAGAATGAAAGAACTCATCAAACTTTTTCCTCAGTGTCTTTGGATAACATGTTTCATCAAGAAGTAGTTGAGGAAGCAAGTAAGATGAGAACACATGTATCAAATGCTTCTTCATTGGCTACAAGTTTGAGCAGTTCAAGAGAAGGTAGTCCAGATAGAACAAGCTTGCAAAATCTCTCTGGAATAATGCCTTCAACAGCTTCAAAACTATTGGTTACTTCTGCTCCAAATAGTAATTTGAATTCTTGGGACCCTTCACAACATCTTAGGCCTTCCCTTTCTTTGCCTCAGATGCCAGTTTTTGCAGCATGGACAGATGCTTAG

Protein sequence

>MsG0880046012.01.T01

MKRMENNDDSVDINNENNWLGFSLSPQMNNIGVTSHTHHHSLPSSASASASEVVPLQASFYHSSPLSNYCYSYGLEHENAGLYSLLPIMPLKSDGSLYEMEALSRSQTQAMSTTSAPKLENFLGNETMGTPHYACSSTVTETMPLSLDSMFQNHIQQNMNNQQQLSYYNSTLRNHELMLEGSKQSQTSSGNFHQSNMGEDHGLSGLKNWVLRNFPASHGHDQSKMIVPVVEENEGECGSNIGSMAYGDLHSLSLSMSPSSQSSCVTTSQNMSSAVVENSVAMDTKKRGSEKFEQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDIIKYDVEKIMASSNLLNIEQARRNKEVVDMSTTQYIDQNKPSSAYDNNSTQEAISMQKNMVLYQSSQHQQLQQNQPRFENERTHQTFSSVSLDNMFHQEVVEEASKMRTHVSNASSLATSLSSSREGSPDRTSLQNLSGIMPSTASKLLVTSAPNSNLNSWDPSQHLRPSLSLPQMPVFAAWTDA*