Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041293.01.T01 | XP_013450348.1 | 74.786 | 234 | 19 | 4 | 1 | 194 | 233 | 466 | 7.18E-112 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041293.01.T01 | O22775 | 67.521 | 234 | 36 | 4 | 1 | 194 | 227 | 460 | 1.03E-104 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041293.01.T01 | A0A072U4W6 | 74.786 | 234 | 19 | 4 | 1 | 194 | 233 | 466 | 3.43e-112 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0780041293.01 | MsG0780041533.01 | 0.815115 | 1.090482e-51 | 7.451695e-49 |
| MsG0780041293.01 | MsG0880046085.01 | 0.833837 | 4.239265e-56 | 4.941343e-53 |
| MsG0780041293.01 | MsG0880046475.01 | 0.809589 | 1.756255e-50 | 1.035341e-47 |
| MsG0480021042.01 | MsG0780041293.01 | 0.802605 | 5.182383e-49 | 2.549375e-46 |
| MsG0380016153.01 | MsG0780041293.01 | 0.822608 | 2.163037e-53 | 1.819470e-50 |
| MsG0580027876.01 | MsG0780041293.01 | 0.805039 | 1.618433e-49 | 8.474831e-47 |
| MsG0680030621.01 | MsG0780041293.01 | 0.821496 | 3.915059e-53 | 3.190212e-50 |
| MsG0780039441.01 | MsG0780041293.01 | 0.863034 | 3.320055e-64 | 9.924566e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041293.01.T01 | MTR_7g108675 | 74.786 | 234 | 19 | 4 | 1 | 194 | 233 | 466 | 8.70e-116 | 337 |
| MsG0780041293.01.T01 | MTR_4g119880 | 67.949 | 234 | 35 | 4 | 1 | 194 | 221 | 454 | 3.05e-108 | 317 |
| MsG0780041293.01.T01 | MTR_8g058553 | 66.484 | 182 | 21 | 4 | 1 | 142 | 233 | 414 | 6.26e-75 | 234 |
| MsG0780041293.01.T01 | MTR_4g108940 | 46.983 | 232 | 83 | 3 | 1 | 192 | 217 | 448 | 1.76e-71 | 223 |
| MsG0780041293.01.T01 | MTR_3g037340 | 47.727 | 220 | 75 | 2 | 1 | 180 | 222 | 441 | 7.50e-70 | 219 |
| MsG0780041293.01.T01 | MTR_4g097230 | 55.556 | 117 | 48 | 2 | 1 | 113 | 180 | 296 | 4.87e-36 | 130 |
| MsG0780041293.01.T01 | MTR_5g015260 | 53.000 | 100 | 47 | 0 | 1 | 100 | 201 | 300 | 1.88e-33 | 124 |
| MsG0780041293.01.T01 | MTR_4g097240 | 53.000 | 100 | 47 | 0 | 1 | 100 | 195 | 294 | 5.66e-31 | 117 |
| MsG0780041293.01.T01 | MTR_4g108950 | 44.944 | 89 | 41 | 2 | 65 | 151 | 1 | 83 | 8.90e-16 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041293.01.T01 | AT4G02500 | 67.521 | 234 | 36 | 4 | 1 | 194 | 227 | 460 | 1.05e-105 | 311 |
| MsG0780041293.01.T01 | AT3G62720 | 64.103 | 234 | 44 | 4 | 1 | 194 | 226 | 459 | 1.23e-99 | 296 |
| MsG0780041293.01.T01 | AT3G62720 | 64.103 | 234 | 44 | 4 | 1 | 194 | 226 | 459 | 1.23e-99 | 296 |
| MsG0780041293.01.T01 | AT5G07720 | 47.414 | 232 | 82 | 3 | 1 | 192 | 226 | 457 | 1.38e-70 | 221 |
| MsG0780041293.01.T01 | AT1G74380 | 48.636 | 220 | 73 | 3 | 1 | 180 | 227 | 446 | 2.87e-70 | 220 |
| MsG0780041293.01.T01 | AT1G18690 | 47.273 | 220 | 76 | 3 | 1 | 180 | 285 | 504 | 4.10e-68 | 216 |
| MsG0780041293.01.T01 | AT1G18690 | 47.273 | 220 | 76 | 3 | 1 | 180 | 285 | 504 | 4.10e-68 | 216 |
| MsG0780041293.01.T01 | AT1G18690 | 47.273 | 220 | 76 | 3 | 1 | 180 | 285 | 504 | 4.10e-68 | 216 |
| MsG0780041293.01.T01 | AT1G18690 | 47.273 | 220 | 76 | 3 | 1 | 180 | 285 | 504 | 4.10e-68 | 216 |
| MsG0780041293.01.T01 | AT2G22900 | 47.170 | 106 | 56 | 0 | 1 | 106 | 200 | 305 | 1.57e-30 | 116 |
| MsG0780041293.01.T01 | AT4G37690 | 48.000 | 100 | 52 | 0 | 1 | 100 | 183 | 282 | 3.93e-29 | 112 |
Find 52 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAATATTGCAGATTTA+TGG | 0.107608 | 7:-89245269 | MsG0780041293.01.T01:CDS |
| TGATGCTATGTTTACGGATA+TGG | 0.232667 | 7:-89245805 | MsG0780041293.01.T01:CDS |
| GTAGGAGAGTTAGGAGAATA+AGG | 0.319874 | 7:-89245223 | MsG0780041293.01.T01:CDS |
| ATGGATAGAGCTTTCAATTT+CGG | 0.322531 | 7:-89245296 | MsG0780041293.01.T01:CDS |
| TGGGACCGAAGGGGAAAGTT+AGG | 0.323142 | 7:-89245620 | MsG0780041293.01.T01:CDS |
| CATTGGTTAGTAGGAGAGTT+AGG | 0.330087 | 7:-89245232 | MsG0780041293.01.T01:CDS |
| CTCATAAGTCATTGGTTAGT+AGG | 0.331750 | 7:-89245241 | MsG0780041293.01.T01:CDS |
| GAGGTATAAAGATTCAAATT+TGG | 0.351394 | 7:-89245763 | MsG0780041293.01.T01:CDS |
| ATTGGATATTCTTGATGCTT+GGG | 0.353018 | 7:-89245649 | MsG0780041293.01.T01:CDS |
| AATTGGATTGGGTTGAATAC+TGG | 0.358814 | 7:-89245702 | MsG0780041293.01.T01:CDS |
| CATTGGATATTCTTGATGCT+TGG | 0.377065 | 7:-89245650 | MsG0780041293.01.T01:CDS |
| TGATCATCTGCTTCGAAAAC+CGG | 0.408172 | 7:+89245555 | None:intergenic |
| TGGATTCACTCATAAGTCAT+TGG | 0.408588 | 7:-89245249 | MsG0780041293.01.T01:CDS |
| GGATAGTGATGCTATGTTTA+CGG | 0.413937 | 7:-89245811 | MsG0780041293.01.T01:CDS |
| GAAGGAAAAGTGGGGTGATA+AGG | 0.433266 | 7:-89245503 | MsG0780041293.01.T01:CDS |
| GATAAGGTTTATCTTGAGAA+TGG | 0.437845 | 7:-89245487 | MsG0780041293.01.T01:CDS |
| CTTGAGGTTAAAGATGAACT+TGG | 0.442102 | 7:-89245182 | MsG0780041293.01.T01:CDS |
| TCATCCCTAACTTTCCCCTT+CGG | 0.442497 | 7:+89245615 | None:intergenic |
| CTATGGTTTATTTGTGGCCA+AGG | 0.451537 | 7:-89245527 | MsG0780041293.01.T01:CDS |
| GGGAAAGTTAGGGATGAAGC+AGG | 0.456571 | 7:-89245609 | MsG0780041293.01.T01:CDS |
| AATCTGCTATGGTTTATTTG+TGG | 0.463425 | 7:-89245533 | MsG0780041293.01.T01:CDS |
| TATGATGAAAAGAATTGGAT+TGG | 0.467866 | 7:-89245714 | MsG0780041293.01.T01:CDS |
| TCTTGATGCTTGGGCACCAA+TGG | 0.469863 | 7:-89245640 | MsG0780041293.01.T01:CDS |
| ACTTTCCCCTTCGGTCCCAT+TGG | 0.471564 | 7:+89245624 | None:intergenic |
| TGGTGTATGATGAAAAGAAT+TGG | 0.476382 | 7:-89245719 | MsG0780041293.01.T01:CDS |
| GAGAATGGTTATTACTTGCA+TGG | 0.490493 | 7:-89245472 | MsG0780041293.01.T01:intron |
| CTTGATGCTTGGGCACCAAT+GGG | 0.494441 | 7:-89245639 | MsG0780041293.01.T01:CDS |
| CAAATTTGGTGATGCATGGT+TGG | 0.496007 | 7:-89245749 | MsG0780041293.01.T01:CDS |
| AGTTCATCTTTAACCTCAAG+AGG | 0.497545 | 7:+89245185 | None:intergenic |
| TTACGCGCGAACTCAAAGAT+AGG | 0.499667 | 7:-89245578 | MsG0780041293.01.T01:CDS |
| TGCTTCAAGCATCTCTCCAC+AGG | 0.506143 | 7:+89245320 | None:intergenic |
| TTGGGCACCAATGGGACCGA+AGG | 0.511361 | 7:-89245631 | MsG0780041293.01.T01:CDS |
| TTTATTTGTGGCCAAGGAGA+AGG | 0.518143 | 7:-89245521 | MsG0780041293.01.T01:CDS |
| TGGGCACCAATGGGACCGAA+GGG | 0.520017 | 7:-89245630 | MsG0780041293.01.T01:CDS |
| GAGGAACTGTCAGTGGTCAT+TGG | 0.527929 | 7:-89245667 | MsG0780041293.01.T01:CDS |
| GGGACCGAAGGGGAAAGTTA+GGG | 0.533356 | 7:-89245619 | MsG0780041293.01.T01:CDS |
| ATGATGAAAAGAATTGGATT+GGG | 0.548297 | 7:-89245713 | MsG0780041293.01.T01:CDS |
| GCGCGAACTCAAAGATAGGC+CGG | 0.551019 | 7:-89245574 | MsG0780041293.01.T01:CDS |
| GGAGAGATGCTTGAAGCAGA+TGG | 0.564442 | 7:-89245315 | MsG0780041293.01.T01:CDS |
| GGAAAGTTAGGGATGAAGCA+GGG | 0.572682 | 7:-89245608 | MsG0780041293.01.T01:CDS |
| GATTCAAATTTGGTGATGCA+TGG | 0.574422 | 7:-89245753 | MsG0780041293.01.T01:CDS |
| AGCAGATGATCAATCTGCTA+TGG | 0.575705 | 7:-89245544 | MsG0780041293.01.T01:CDS |
| ACCTCAACAGCTTTAAAAGT+CGG | 0.576971 | 7:+89245149 | None:intergenic |
| GGCCAAGGAGAAGGAAAAGT+GGG | 0.582423 | 7:-89245512 | MsG0780041293.01.T01:CDS |
| TGGCCAAGGAGAAGGAAAAG+TGG | 0.598754 | 7:-89245513 | MsG0780041293.01.T01:CDS |
| TGAGACTAGTAATCCTCTTG+AGG | 0.598964 | 7:-89245198 | MsG0780041293.01.T01:CDS |
| CAACAGCTTTAAAAGTCGGA+TGG | 0.599198 | 7:+89245153 | None:intergenic |
| GAATCTTTATACCTCTCCCA+CGG | 0.600071 | 7:+89245771 | None:intergenic |
| GATGCATGGTTGGAATGAGA+TGG | 0.650662 | 7:-89245739 | MsG0780041293.01.T01:CDS |
| GGGCACCAATGGGACCGAAG+GGG | 0.652159 | 7:-89245629 | MsG0780041293.01.T01:CDS |
| GAAGTTTGGTGATTATCCTG+TGG | 0.716211 | 7:-89245336 | MsG0780041293.01.T01:intron |
| GCCAAGGAGAAGGAAAAGTG+GGG | 0.724519 | 7:-89245511 | MsG0780041293.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAATATTGCAGATTTA+TGG | - | Chr7:89245677-89245696 | MsG0780041293.01.T01:CDS | 20.0% |
| ! | ATGATGAAAAGAATTGGATT+GGG | - | Chr7:89245233-89245252 | MsG0780041293.01.T01:CDS | 25.0% |
| ! | GAGGTATAAAGATTCAAATT+TGG | - | Chr7:89245183-89245202 | MsG0780041293.01.T01:CDS | 25.0% |
| ! | TATGATGAAAAGAATTGGAT+TGG | - | Chr7:89245232-89245251 | MsG0780041293.01.T01:CDS | 25.0% |
| AATCTGCTATGGTTTATTTG+TGG | - | Chr7:89245413-89245432 | MsG0780041293.01.T01:intron | 30.0% | |
| ATGATTGAGAATTATCATCC+TGG | - | Chr7:89245531-89245550 | MsG0780041293.01.T01:CDS | 30.0% | |
| ATGGATAGAGCTTTCAATTT+CGG | - | Chr7:89245650-89245669 | MsG0780041293.01.T01:CDS | 30.0% | |
| ATTGGATATTCTTGATGCTT+GGG | - | Chr7:89245297-89245316 | MsG0780041293.01.T01:CDS | 30.0% | |
| GATAAGGTTTATCTTGAGAA+TGG | - | Chr7:89245459-89245478 | MsG0780041293.01.T01:intron | 30.0% | |
| TGGTGTATGATGAAAAGAAT+TGG | - | Chr7:89245227-89245246 | MsG0780041293.01.T01:CDS | 30.0% | |
| TTATTACTTGCATGGTTACT+GGG | - | Chr7:89245482-89245501 | MsG0780041293.01.T01:CDS | 30.0% | |
| !!! | ATACTGGTAGTTTTTTGTTG+AGG | - | Chr7:89245260-89245279 | MsG0780041293.01.T01:CDS | 30.0% |
| !!! | GATTTTGGTTGATAGATATG+AGG | - | Chr7:89245506-89245525 | MsG0780041293.01.T01:CDS | 30.0% |
| AGTTCATCTTTAACCTCAAG+AGG | + | Chr7:89245764-89245783 | None:intergenic | 35.0% | |
| CATTGGATATTCTTGATGCT+TGG | - | Chr7:89245296-89245315 | MsG0780041293.01.T01:CDS | 35.0% | |
| CTTGAGGTTAAAGATGAACT+TGG | - | Chr7:89245764-89245783 | MsG0780041293.01.T01:CDS | 35.0% | |
| GAGAATGGTTATTACTTGCA+TGG | - | Chr7:89245474-89245493 | MsG0780041293.01.T01:CDS | 35.0% | |
| GGATAGTGATGCTATGTTTA+CGG | - | Chr7:89245135-89245154 | MsG0780041293.01.T01:CDS | 35.0% | |
| GTTATTACTTGCATGGTTAC+TGG | - | Chr7:89245481-89245500 | MsG0780041293.01.T01:CDS | 35.0% | |
| TATTACTTGCATGGTTACTG+GGG | - | Chr7:89245483-89245502 | MsG0780041293.01.T01:CDS | 35.0% | |
| TGATGCTATGTTTACGGATA+TGG | - | Chr7:89245141-89245160 | MsG0780041293.01.T01:CDS | 35.0% | |
| TGGATTCACTCATAAGTCAT+TGG | - | Chr7:89245697-89245716 | MsG0780041293.01.T01:CDS | 35.0% | |
| ! | CTCATAAGTCATTGGTTAGT+AGG | - | Chr7:89245705-89245724 | MsG0780041293.01.T01:CDS | 35.0% |
| ! | GAGAATTATCATCCTGGTTT+TGG | - | Chr7:89245537-89245556 | MsG0780041293.01.T01:CDS | 35.0% |
| !! | AATTGGATTGGGTTGAATAC+TGG | - | Chr7:89245244-89245263 | MsG0780041293.01.T01:CDS | 35.0% |
| !! | ACCTCAACAGCTTTAAAAGT+CGG | + | Chr7:89245800-89245819 | None:intergenic | 35.0% |
| !! | GATTCAAATTTGGTGATGCA+TGG | - | Chr7:89245193-89245212 | MsG0780041293.01.T01:CDS | 35.0% |
| AGCAGATGATCAATCTGCTA+TGG | - | Chr7:89245402-89245421 | MsG0780041293.01.T01:intron | 40.0% | |
| ATTACTTGCATGGTTACTGG+GGG | - | Chr7:89245484-89245503 | MsG0780041293.01.T01:CDS | 40.0% | |
| CTATGGTTTATTTGTGGCCA+AGG | - | Chr7:89245419-89245438 | MsG0780041293.01.T01:intron | 40.0% | |
| GAATCTTTATACCTCTCCCA+CGG | + | Chr7:89245178-89245197 | None:intergenic | 40.0% | |
| GTAGGAGAGTTAGGAGAATA+AGG | - | Chr7:89245723-89245742 | MsG0780041293.01.T01:CDS | 40.0% | |
| TAATCACCAAACTTCCCACA+AGG | + | Chr7:89245605-89245624 | None:intergenic | 40.0% | |
| TGAGACTAGTAATCCTCTTG+AGG | - | Chr7:89245748-89245767 | MsG0780041293.01.T01:CDS | 40.0% | |
| TGATCATCTGCTTCGAAAAC+CGG | + | Chr7:89245394-89245413 | None:intergenic | 40.0% | |
| TTTATTTGTGGCCAAGGAGA+AGG | - | Chr7:89245425-89245444 | MsG0780041293.01.T01:intron | 40.0% | |
| ! | CATTGGTTAGTAGGAGAGTT+AGG | - | Chr7:89245714-89245733 | MsG0780041293.01.T01:CDS | 40.0% |
| ! | GAAGTTTGGTGATTATCCTG+TGG | - | Chr7:89245610-89245629 | MsG0780041293.01.T01:CDS | 40.0% |
| ! | TTTTGTTGAGGAACTGTCAG+TGG | - | Chr7:89245272-89245291 | MsG0780041293.01.T01:CDS | 40.0% |
| !! | CAAATTTGGTGATGCATGGT+TGG | - | Chr7:89245197-89245216 | MsG0780041293.01.T01:CDS | 40.0% |
| !! | CAACAGCTTTAAAAGTCGGA+TGG | + | Chr7:89245796-89245815 | None:intergenic | 40.0% |
| !! | CATTGGTGACTCATTTTGTG+GGG | - | Chr7:89245574-89245593 | MsG0780041293.01.T01:CDS | 40.0% |
| !! | CCATTGGTGACTCATTTTGT+GGG | - | Chr7:89245573-89245592 | MsG0780041293.01.T01:CDS | 40.0% |
| !!! | TCCGACTTTTAAAGCTGTTG+AGG | - | Chr7:89245796-89245815 | MsG0780041293.01.T01:CDS | 40.0% |
| CCCACAAAATGAGTCACCAA+TGG | + | Chr7:89245576-89245595 | None:intergenic | 45.0% | |
| GAAGGAAAAGTGGGGTGATA+AGG | - | Chr7:89245443-89245462 | MsG0780041293.01.T01:intron | 45.0% | |
| GATGCATGGTTGGAATGAGA+TGG | - | Chr7:89245207-89245226 | MsG0780041293.01.T01:CDS | 45.0% | |
| GGAAAGTTAGGGATGAAGCA+GGG | - | Chr7:89245338-89245357 | MsG0780041293.01.T01:intron | 45.0% | |
| GTGTAACCTTGTGGGAAGTT+TGG | - | Chr7:89245596-89245615 | MsG0780041293.01.T01:CDS | 45.0% | |
| TCATCCCTAACTTTCCCCTT+CGG | + | Chr7:89245334-89245353 | None:intergenic | 45.0% | |
| TTACGCGCGAACTCAAAGAT+AGG | - | Chr7:89245368-89245387 | MsG0780041293.01.T01:intron | 45.0% | |
| TTTGTGGGGTGTAACCTTGT+GGG | - | Chr7:89245588-89245607 | MsG0780041293.01.T01:CDS | 45.0% | |
| ! | TTTTGTGGGGTGTAACCTTG+TGG | - | Chr7:89245587-89245606 | MsG0780041293.01.T01:CDS | 45.0% |
| !! | GCCATTGGTGACTCATTTTG+TGG | - | Chr7:89245572-89245591 | MsG0780041293.01.T01:CDS | 45.0% |
| !!! | ATATGGCTTTTGAAGTGCCG+TGG | - | Chr7:89245158-89245177 | MsG0780041293.01.T01:CDS | 45.0% |
| !!! | ATCCTGGTTTTGGTGACCAT+AGG | - | Chr7:89245547-89245566 | MsG0780041293.01.T01:CDS | 45.0% |
| !!! | TATGGCTTTTGAAGTGCCGT+GGG | - | Chr7:89245159-89245178 | MsG0780041293.01.T01:CDS | 45.0% |
| CACCTATGGTCACCAAAACC+AGG | + | Chr7:89245552-89245571 | None:intergenic | 50.0% | |
| CTTGATGCTTGGGCACCAAT+GGG | - | Chr7:89245307-89245326 | MsG0780041293.01.T01:CDS | 50.0% | |
| GAGGAACTGTCAGTGGTCAT+TGG | - | Chr7:89245279-89245298 | MsG0780041293.01.T01:CDS | 50.0% | |
| GCCAAGGAGAAGGAAAAGTG+GGG | - | Chr7:89245435-89245454 | MsG0780041293.01.T01:intron | 50.0% | |
| GGAGAGATGCTTGAAGCAGA+TGG | - | Chr7:89245631-89245650 | MsG0780041293.01.T01:CDS | 50.0% | |
| GGCCAAGGAGAAGGAAAAGT+GGG | - | Chr7:89245434-89245453 | MsG0780041293.01.T01:intron | 50.0% | |
| GGGAAAGTTAGGGATGAAGC+AGG | - | Chr7:89245337-89245356 | MsG0780041293.01.T01:intron | 50.0% | |
| TCTTGATGCTTGGGCACCAA+TGG | - | Chr7:89245306-89245325 | MsG0780041293.01.T01:CDS | 50.0% | |
| TGCTTCAAGCATCTCTCCAC+AGG | + | Chr7:89245629-89245648 | None:intergenic | 50.0% | |
| TGGCCAAGGAGAAGGAAAAG+TGG | - | Chr7:89245433-89245452 | MsG0780041293.01.T01:intron | 50.0% | |
| ! | GCATGGTTACTGGGGGATTT+TGG | - | Chr7:89245491-89245510 | MsG0780041293.01.T01:CDS | 50.0% |
| !! | ACCCCACTTTTCCTTCTCCT+TGG | + | Chr7:89245439-89245458 | None:intergenic | 50.0% |
| !!! | CTGGTTTTGGTGACCATAGG+TGG | - | Chr7:89245550-89245569 | MsG0780041293.01.T01:CDS | 50.0% |
| ACTTTCCCCTTCGGTCCCAT+TGG | + | Chr7:89245325-89245344 | None:intergenic | 55.0% | |
| GAGTCACCAATGGCCACCTA+TGG | + | Chr7:89245566-89245585 | None:intergenic | 55.0% | |
| GCGCGAACTCAAAGATAGGC+CGG | - | Chr7:89245372-89245391 | MsG0780041293.01.T01:intron | 55.0% | |
| GGGACCGAAGGGGAAAGTTA+GGG | - | Chr7:89245327-89245346 | MsG0780041293.01.T01:CDS | 55.0% | |
| TGGGACCGAAGGGGAAAGTT+AGG | - | Chr7:89245326-89245345 | MsG0780041293.01.T01:CDS | 55.0% | |
| TGGTGACCATAGGTGGCCAT+TGG | - | Chr7:89245557-89245576 | MsG0780041293.01.T01:CDS | 55.0% | |
| !!! | CTTTTGAAGTGCCGTGGGAG+AGG | - | Chr7:89245164-89245183 | MsG0780041293.01.T01:CDS | 55.0% |
| TGGGCACCAATGGGACCGAA+GGG | - | Chr7:89245316-89245335 | MsG0780041293.01.T01:CDS | 60.0% | |
| TTGGGCACCAATGGGACCGA+AGG | - | Chr7:89245315-89245334 | MsG0780041293.01.T01:CDS | 60.0% | |
| GGGCACCAATGGGACCGAAG+GGG | - | Chr7:89245317-89245336 | MsG0780041293.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 89245133 | 89245835 | 89245133 | ID=MsG0780041293.01;Name=MsG0780041293.01 |
| Chr7 | mRNA | 89245133 | 89245835 | 89245133 | ID=MsG0780041293.01.T01;Parent=MsG0780041293.01;Name=MsG0780041293.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|194 |
| Chr7 | exon | 89245473 | 89245835 | 89245473 | ID=MsG0780041293.01.T01:exon:20647;Parent=MsG0780041293.01.T01 |
| Chr7 | exon | 89245133 | 89245354 | 89245133 | ID=MsG0780041293.01.T01:exon:20646;Parent=MsG0780041293.01.T01 |
| Chr7 | CDS | 89245473 | 89245835 | 89245473 | ID=MsG0780041293.01.T01:cds;Parent=MsG0780041293.01.T01 |
| Chr7 | CDS | 89245133 | 89245354 | 89245133 | ID=MsG0780041293.01.T01:cds;Parent=MsG0780041293.01.T01 |
| Gene Sequence |
| Protein sequence |
