Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027876.01.T01 | XP_003615144.1 | 94.62 | 316 | 17 | 0 | 1 | 316 | 1 | 316 | 0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027876.01.T01 | O82161 | 74.038 | 312 | 72 | 4 | 9 | 316 | 7 | 313 | 2.42E-164 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027876.01.T01 | G7KBC1 | 94.620 | 316 | 17 | 0 | 1 | 316 | 1 | 316 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380017116.01 | MsG0580027876.01 | 0.835653 | 1.480342e-56 | 1.821900e-53 |
| MsG0580027860.01 | MsG0580027876.01 | 0.938979 | 2.738819e-99 | 2.735308e-94 |
| MsG0580027863.01 | MsG0580027876.01 | 0.884045 | 2.680777e-71 | 1.741775e-67 |
| MsG0580027864.01 | MsG0580027876.01 | 0.860531 | 1.935685e-63 | 5.308124e-60 |
| MsG0580027875.01 | MsG0580027876.01 | 0.909055 | 8.690160e-82 | 1.659917e-77 |
| MsG0580027876.01 | MsG0580027877.01 | 0.865607 | 5.222656e-65 | 1.709719e-61 |
| MsG0580027876.01 | MsG0580028371.01 | 0.855453 | 6.247589e-62 | 1.443167e-58 |
| MsG0580027876.01 | MsG0780041293.01 | 0.805039 | 1.618433e-49 | 8.474831e-47 |
| MsG0580027876.01 | MsG0880046475.01 | 0.833577 | 4.924678e-56 | 5.694771e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027876.01.T01 | MTR_5g064360 | 94.620 | 316 | 17 | 0 | 1 | 316 | 1 | 316 | 0.0 | 617 |
| MsG0580027876.01.T01 | MTR_5g064345 | 93.354 | 316 | 20 | 1 | 1 | 316 | 1 | 315 | 0.0 | 601 |
| MsG0580027876.01.T01 | MTR_5g464340 | 92.405 | 316 | 23 | 1 | 1 | 316 | 1 | 315 | 0.0 | 596 |
| MsG0580027876.01.T01 | MTR_5g064340 | 92.405 | 316 | 23 | 1 | 1 | 316 | 1 | 315 | 0.0 | 596 |
| MsG0580027876.01.T01 | MTR_3g074860 | 78.788 | 297 | 50 | 3 | 20 | 316 | 21 | 304 | 1.55e-171 | 478 |
| MsG0580027876.01.T01 | MTR_3g074890 | 78.451 | 297 | 51 | 4 | 20 | 316 | 21 | 304 | 3.15e-170 | 474 |
| MsG0580027876.01.T01 | MTR_3g074830 | 71.383 | 311 | 85 | 3 | 9 | 316 | 36 | 345 | 9.08e-157 | 442 |
| MsG0580027876.01.T01 | MTR_4g094240 | 61.053 | 285 | 97 | 3 | 32 | 316 | 30 | 300 | 1.88e-121 | 351 |
| MsG0580027876.01.T01 | MTR_2g009070 | 52.201 | 318 | 135 | 7 | 1 | 316 | 2 | 304 | 2.43e-116 | 338 |
| MsG0580027876.01.T01 | MTR_1g076470 | 34.169 | 319 | 189 | 7 | 6 | 313 | 33 | 341 | 2.99e-46 | 160 |
| MsG0580027876.01.T01 | MTR_4g033790 | 36.237 | 287 | 161 | 8 | 26 | 301 | 54 | 329 | 3.18e-46 | 160 |
| MsG0580027876.01.T01 | MTR_8g071310 | 70.588 | 68 | 20 | 0 | 249 | 316 | 18 | 85 | 3.80e-27 | 102 |
| MsG0580027876.01.T01 | MTR_8g088900 | 75.385 | 65 | 16 | 0 | 252 | 316 | 308 | 372 | 1.24e-25 | 105 |
| MsG0580027876.01.T01 | MTR_4g013230 | 75.385 | 65 | 13 | 1 | 252 | 316 | 79 | 140 | 3.05e-25 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027876.01.T01 | AT4G08950 | 72.069 | 290 | 75 | 4 | 30 | 316 | 28 | 314 | 1.12e-147 | 418 |
| MsG0580027876.01.T01 | AT1G35140 | 63.175 | 315 | 109 | 3 | 1 | 315 | 1 | 308 | 1.74e-141 | 402 |
| MsG0580027876.01.T01 | AT5G64260 | 55.031 | 318 | 128 | 5 | 1 | 316 | 1 | 305 | 1.99e-119 | 346 |
| MsG0580027876.01.T01 | AT5G09440 | 58.394 | 274 | 85 | 6 | 45 | 316 | 32 | 278 | 8.07e-101 | 298 |
| MsG0580027876.01.T01 | AT5G51550 | 35.410 | 305 | 175 | 8 | 20 | 313 | 38 | 331 | 2.76e-47 | 162 |
| MsG0580027876.01.T01 | AT3G02970 | 31.667 | 300 | 167 | 7 | 47 | 314 | 37 | 330 | 6.85e-46 | 158 |
| MsG0580027876.01.T01 | AT2G35150 | 33.846 | 325 | 188 | 11 | 6 | 312 | 1 | 316 | 1.13e-41 | 147 |
| MsG0580027876.01.T01 | AT2G17230 | 32.566 | 304 | 183 | 9 | 22 | 313 | 64 | 357 | 5.74e-41 | 146 |
Find 69 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTCACCAACCAATTTA+TGG | 0.182864 | 5:+70155909 | MsG0580027876.01.T01:CDS |
| TCAAGACCCACGTCGTTATT+TGG | 0.226980 | 5:-70155957 | None:intergenic |
| GGAACCCACGGTTCTTCTTA+TGG | 0.267702 | 5:+70155801 | MsG0580027876.01.T01:CDS |
| AACATAAATTCGCATACATT+TGG | 0.287196 | 5:+70155844 | MsG0580027876.01.T01:CDS |
| CTCGATGAGAATTACTCTTT+AGG | 0.297921 | 5:+70155657 | MsG0580027876.01.T01:CDS |
| TGGTTATGCTGGGGACCTTT+TGG | 0.299405 | 5:+70156121 | MsG0580027876.01.T01:CDS |
| GCACTTTGTGGACCATAAAT+TGG | 0.307975 | 5:-70155921 | None:intergenic |
| GCTTCCAAAGGAGCTTCTTT+TGG | 0.308698 | 5:-70156056 | None:intergenic |
| TTGATGCGAGTTTAAGGATT+TGG | 0.323024 | 5:-70155698 | None:intergenic |
| AGCTCCTTTGGAAGCTGCTT+CGG | 0.362716 | 5:+70156064 | MsG0580027876.01.T01:CDS |
| ACATAAATTCGCATACATTT+GGG | 0.370983 | 5:+70155845 | MsG0580027876.01.T01:CDS |
| AGGACCAAAAGAAGCTCCTT+TGG | 0.376105 | 5:+70156052 | MsG0580027876.01.T01:CDS |
| CCATAAATTGGTTGGTGAAA+TGG | 0.381983 | 5:-70155909 | None:intergenic |
| AAATCTCAATCAACCTCATT+TGG | 0.382865 | 5:+70155445 | MsG0580027876.01.T01:CDS |
| AATAACGACGTGGGTCTTGA+TGG | 0.391615 | 5:+70155960 | MsG0580027876.01.T01:CDS |
| AGAGAGTGAGGTTATGAAAT+CGG | 0.395701 | 5:-70155505 | None:intergenic |
| AATCGGTTATGATGACCCTT+TGG | 0.397520 | 5:-70155488 | None:intergenic |
| CGGTGAGAAGAGGGCCTTTG+TGG | 0.401444 | 5:-70155419 | None:intergenic |
| TTCCACCACGTGGCAACATA+TGG | 0.408705 | 5:-70155558 | None:intergenic |
| TACAACGCTAATGGTGATAA+TGG | 0.420824 | 5:+70156167 | MsG0580027876.01.T01:CDS |
| GGAGCTTATCCTGGTTATGC+TGG | 0.426719 | 5:+70156110 | MsG0580027876.01.T01:CDS |
| TCTTATGGTGCACGCGTGAA+TGG | 0.440385 | 5:+70155816 | MsG0580027876.01.T01:CDS |
| GATGTGGTTGTTCCTTGTTT+AGG | 0.441091 | 5:-70155531 | None:intergenic |
| GGTATTGAAATTTAAGTTGT+TGG | 0.450783 | 5:-70155398 | None:intergenic |
| GGAACCGTAACCAATCCTTT+TGG | 0.451430 | 5:+70156014 | MsG0580027876.01.T01:CDS |
| AGCTGTTAGAACAACGTTGA+TGG | 0.452654 | 5:-70155739 | None:intergenic |
| TGAAAATATCCATTACCAAA+AGG | 0.461381 | 5:-70156029 | None:intergenic |
| GCAACCAATGGTGCACTTTG+TGG | 0.466845 | 5:-70155933 | None:intergenic |
| GAAGCTGCTTCGGCTTGTAC+CGG | 0.475241 | 5:+70156074 | MsG0580027876.01.T01:CDS |
| ATCCTTAAACTCGCATCAAA+AGG | 0.475704 | 5:+70155702 | MsG0580027876.01.T01:CDS |
| ATCGGTTATGATGACCCTTT+GGG | 0.478271 | 5:-70155487 | None:intergenic |
| TGTACCGGTGTTTATGCTAA+AGG | 0.481549 | 5:+70156089 | MsG0580027876.01.T01:CDS |
| ATATCCATTACCAAAAGGAT+TGG | 0.488324 | 5:-70156024 | None:intergenic |
| TCAATCAACCTCATTTGGTA+TGG | 0.491730 | 5:+70155450 | MsG0580027876.01.T01:CDS |
| TATGCTAAAGGAGCTTATCC+TGG | 0.497752 | 5:+70156101 | MsG0580027876.01.T01:CDS |
| ATTACCAAAAGGATTGGTTA+CGG | 0.504727 | 5:-70156018 | None:intergenic |
| AACTTCAGCTTGTTCTACAT+TGG | 0.507055 | 5:+70156226 | MsG0580027876.01.T01:CDS |
| CGTTAGAAAACTCACTGAAT+CGG | 0.507076 | 5:+70155374 | MsG0580027876.01.T01:CDS |
| TGGTCCACAAAGTGCACCAT+TGG | 0.507521 | 5:+70155929 | MsG0580027876.01.T01:CDS |
| GGTGCTAGCTACAACGCTAA+TGG | 0.508260 | 5:+70156158 | MsG0580027876.01.T01:CDS |
| CGACGTGGGTCTTGATGGAA+TGG | 0.510762 | 5:+70155965 | MsG0580027876.01.T01:CDS |
| TCGTTATTTGGTGCAACCAA+TGG | 0.519228 | 5:-70155945 | None:intergenic |
| AAATTCGCATACATTTGGGT+TGG | 0.526466 | 5:+70155849 | MsG0580027876.01.T01:CDS |
| GAGCTTATCCTGGTTATGCT+GGG | 0.526776 | 5:+70156111 | MsG0580027876.01.T01:CDS |
| CACAAAGGCCCTCTTCTCAC+CGG | 0.560896 | 5:+70155420 | MsG0580027876.01.T01:CDS |
| AAAAGGTCCCCAGCATAACC+AGG | 0.566674 | 5:-70156119 | None:intergenic |
| ACGCTAATGGTGATAATGGA+AGG | 0.567526 | 5:+70156171 | MsG0580027876.01.T01:CDS |
| AAAATTCAAACCATCCCAAA+GGG | 0.579451 | 5:+70155473 | MsG0580027876.01.T01:CDS |
| GAAAATTCAAACCATCCCAA+AGG | 0.589975 | 5:+70155472 | MsG0580027876.01.T01:CDS |
| AACCATATGTTGCCACGTGG+TGG | 0.591637 | 5:+70155556 | MsG0580027876.01.T01:CDS |
| AATTCAGAGACACAATGTGC+TGG | 0.594460 | 5:+70155873 | MsG0580027876.01.T01:CDS |
| TCAAGTAGGTGTGGAACCCA+CGG | 0.602320 | 5:+70155789 | MsG0580027876.01.T01:CDS |
| GTTATGATGACCCTTTGGGA+TGG | 0.603423 | 5:-70155483 | None:intergenic |
| TTGTTTAGGAGAAGAGAGTG+AGG | 0.609851 | 5:-70155517 | None:intergenic |
| GCTGCTGATGTGTTAGTCGA+CGG | 0.611157 | 5:+70155759 | MsG0580027876.01.T01:CDS |
| TTTGTGGACCATAAATTGGT+TGG | 0.611426 | 5:-70155917 | None:intergenic |
| CTTAAATTTCAATACCACAA+AGG | 0.623830 | 5:+70155405 | MsG0580027876.01.T01:CDS |
| AGCTTATCCTGGTTATGCTG+GGG | 0.628401 | 5:+70156112 | MsG0580027876.01.T01:CDS |
| CAAGCCGAAGCAGCTTCCAA+AGG | 0.645366 | 5:-70156068 | None:intergenic |
| TCACTCTCTTCTCCTAAACA+AGG | 0.648969 | 5:+70155519 | MsG0580027876.01.T01:CDS |
| TTCGGTTGATTTCCACCACG+TGG | 0.652662 | 5:-70155568 | None:intergenic |
| TGCACCATAAGAAGAACCGT+GGG | 0.675126 | 5:-70155805 | None:intergenic |
| GTGCACCATAAGAAGAACCG+TGG | 0.675290 | 5:-70155806 | None:intergenic |
| GGTTGCACCAAATAACGACG+TGG | 0.677801 | 5:+70155950 | MsG0580027876.01.T01:CDS |
| AATGTGCTGGTCAATGCGCA+TGG | 0.679785 | 5:+70155886 | MsG0580027876.01.T01:CDS |
| AGCTCCTTTAGCATAAACAC+CGG | 0.684494 | 5:-70156093 | None:intergenic |
| CACAACCATATGTTGCCACG+TGG | 0.695391 | 5:+70155553 | MsG0580027876.01.T01:CDS |
| GGCAACATATGGTTGTGATG+TGG | 0.703585 | 5:-70155547 | None:intergenic |
| GTTGCACCAAATAACGACGT+GGG | 0.717789 | 5:+70155951 | MsG0580027876.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGCTGATTTTTTATTGT+TGG | - | Chr5:70155610-70155629 | None:intergenic | 20.0% |
| ! | AACATAAATTCGCATACATT+TGG | + | Chr5:70155844-70155863 | MsG0580027876.01.T01:CDS | 25.0% |
| ! | ACATAAATTCGCATACATTT+GGG | + | Chr5:70155845-70155864 | MsG0580027876.01.T01:CDS | 25.0% |
| ! | CTTAAATTTCAATACCACAA+AGG | + | Chr5:70155405-70155424 | MsG0580027876.01.T01:CDS | 25.0% |
| ! | TGAAAATATCCATTACCAAA+AGG | - | Chr5:70156032-70156051 | None:intergenic | 25.0% |
| !!! | ATTTTTTATTGTTGGTGAGT+TGG | - | Chr5:70155602-70155621 | None:intergenic | 25.0% |
| !!! | GGTATTGAAATTTAAGTTGT+TGG | - | Chr5:70155401-70155420 | None:intergenic | 25.0% |
| !!! | TTTGGTAATGGATATTTTCA+AGG | + | Chr5:70156032-70156051 | MsG0580027876.01.T01:CDS | 25.0% |
| AAAATTCAAACCATCCCAAA+GGG | + | Chr5:70155473-70155492 | MsG0580027876.01.T01:CDS | 30.0% | |
| AAATCTCAATCAACCTCATT+TGG | + | Chr5:70155445-70155464 | MsG0580027876.01.T01:CDS | 30.0% | |
| ATATCCATTACCAAAAGGAT+TGG | - | Chr5:70156027-70156046 | None:intergenic | 30.0% | |
| ! | TGAATTTTCCATACCAAATG+AGG | - | Chr5:70155461-70155480 | None:intergenic | 30.0% |
| !! | ATTACCAAAAGGATTGGTTA+CGG | - | Chr5:70156021-70156040 | None:intergenic | 30.0% |
| !!! | GGTGAGTTGGTAATATTTTT+CGG | - | Chr5:70155589-70155608 | None:intergenic | 30.0% |
| AAATTCGCATACATTTGGGT+TGG | + | Chr5:70155849-70155868 | MsG0580027876.01.T01:CDS | 35.0% | |
| AGAGAGTGAGGTTATGAAAT+CGG | - | Chr5:70155508-70155527 | None:intergenic | 35.0% | |
| ATCCTTAAACTCGCATCAAA+AGG | + | Chr5:70155702-70155721 | MsG0580027876.01.T01:CDS | 35.0% | |
| CCATTTCACCAACCAATTTA+TGG | + | Chr5:70155909-70155928 | MsG0580027876.01.T01:CDS | 35.0% | |
| CGTTAGAAAACTCACTGAAT+CGG | + | Chr5:70155374-70155393 | MsG0580027876.01.T01:CDS | 35.0% | |
| CTCGATGAGAATTACTCTTT+AGG | + | Chr5:70155657-70155676 | MsG0580027876.01.T01:CDS | 35.0% | |
| GAAAATTCAAACCATCCCAA+AGG | + | Chr5:70155472-70155491 | MsG0580027876.01.T01:CDS | 35.0% | |
| TACAACGCTAATGGTGATAA+TGG | + | Chr5:70156167-70156186 | MsG0580027876.01.T01:CDS | 35.0% | |
| TCAATCAACCTCATTTGGTA+TGG | + | Chr5:70155450-70155469 | MsG0580027876.01.T01:CDS | 35.0% | |
| TTGATGCGAGTTTAAGGATT+TGG | - | Chr5:70155701-70155720 | None:intergenic | 35.0% | |
| TTTGTGGACCATAAATTGGT+TGG | - | Chr5:70155920-70155939 | None:intergenic | 35.0% | |
| ! | AACTTCAGCTTGTTCTACAT+TGG | + | Chr5:70156226-70156245 | MsG0580027876.01.T01:CDS | 35.0% |
| ! | CGATTCAGTGAGTTTTCTAA+CGG | - | Chr5:70155376-70155395 | None:intergenic | 35.0% |
| ! | GTAACCAATCCTTTTGGTAA+TGG | + | Chr5:70156020-70156039 | MsG0580027876.01.T01:CDS | 35.0% |
| ! | GTAGAACAAGCTGAAGTTTT+AGG | - | Chr5:70156224-70156243 | None:intergenic | 35.0% |
| !! | CCATAAATTGGTTGGTGAAA+TGG | - | Chr5:70155912-70155931 | None:intergenic | 35.0% |
| !! | GAGGTTGATTGAGATTTTTC+CGG | - | Chr5:70155442-70155461 | None:intergenic | 35.0% |
| !!! | AATGTTGCTAGTCTTTTAGC+TGG | + | Chr5:70155993-70156012 | MsG0580027876.01.T01:CDS | 35.0% |
| AATCGGTTATGATGACCCTT+TGG | - | Chr5:70155491-70155510 | None:intergenic | 40.0% | |
| AATTCAGAGACACAATGTGC+TGG | + | Chr5:70155873-70155892 | MsG0580027876.01.T01:CDS | 40.0% | |
| AGCTCCTTTAGCATAAACAC+CGG | - | Chr5:70156096-70156115 | None:intergenic | 40.0% | |
| AGCTGTTAGAACAACGTTGA+TGG | - | Chr5:70155742-70155761 | None:intergenic | 40.0% | |
| ATCGGTTATGATGACCCTTT+GGG | - | Chr5:70155490-70155509 | None:intergenic | 40.0% | |
| GCACTTTGTGGACCATAAAT+TGG | - | Chr5:70155924-70155943 | None:intergenic | 40.0% | |
| TATGCTAAAGGAGCTTATCC+TGG | + | Chr5:70156101-70156120 | MsG0580027876.01.T01:CDS | 40.0% | |
| TCACTCTCTTCTCCTAAACA+AGG | + | Chr5:70155519-70155538 | MsG0580027876.01.T01:CDS | 40.0% | |
| TTGTTTAGGAGAAGAGAGTG+AGG | - | Chr5:70155520-70155539 | None:intergenic | 40.0% | |
| ! | AGATTTTTCCGGTGAGAAGA+GGG | - | Chr5:70155431-70155450 | None:intergenic | 40.0% |
| ! | GATGTGGTTGTTCCTTGTTT+AGG | - | Chr5:70155534-70155553 | None:intergenic | 40.0% |
| ! | GGTTTTTGTTCAAGTAGGTG+TGG | + | Chr5:70155780-70155799 | MsG0580027876.01.T01:CDS | 40.0% |
| ! | GTCCTTTTGATGCGAGTTTA+AGG | - | Chr5:70155707-70155726 | None:intergenic | 40.0% |
| ! | TCGACGGTTTTTGTTCAAGT+AGG | + | Chr5:70155775-70155794 | MsG0580027876.01.T01:CDS | 40.0% |
| ! | TGTACCGGTGTTTATGCTAA+AGG | + | Chr5:70156089-70156108 | MsG0580027876.01.T01:CDS | 40.0% |
| !! | ACGCTAATGGTGATAATGGA+AGG | + | Chr5:70156171-70156190 | MsG0580027876.01.T01:CDS | 40.0% |
| !! | CTTTTGGTGGACAAAACAAG+TGG | + | Chr5:70156137-70156156 | MsG0580027876.01.T01:CDS | 40.0% |
| !! | TCGTTATTTGGTGCAACCAA+TGG | - | Chr5:70155948-70155967 | None:intergenic | 40.0% |
| !!! | CACTTGTTTTGTCCACCAAA+AGG | - | Chr5:70156139-70156158 | None:intergenic | 40.0% |
| !!! | GTTTTAGGATCAACAATCGC+AGG | - | Chr5:70156209-70156228 | None:intergenic | 40.0% |
| AATAACGACGTGGGTCTTGA+TGG | + | Chr5:70155960-70155979 | MsG0580027876.01.T01:CDS | 45.0% | |
| AGCTTATCCTGGTTATGCTG+GGG | + | Chr5:70156112-70156131 | MsG0580027876.01.T01:CDS | 45.0% | |
| AGGACCAAAAGAAGCTCCTT+TGG | + | Chr5:70156052-70156071 | MsG0580027876.01.T01:CDS | 45.0% | |
| GAGCTTATCCTGGTTATGCT+GGG | + | Chr5:70156111-70156130 | MsG0580027876.01.T01:CDS | 45.0% | |
| GGCAACATATGGTTGTGATG+TGG | - | Chr5:70155550-70155569 | None:intergenic | 45.0% | |
| GTTGCACCAAATAACGACGT+GGG | + | Chr5:70155951-70155970 | MsG0580027876.01.T01:CDS | 45.0% | |
| TCAAGACCCACGTCGTTATT+TGG | - | Chr5:70155960-70155979 | None:intergenic | 45.0% | |
| TGCACCATAAGAAGAACCGT+GGG | - | Chr5:70155808-70155827 | None:intergenic | 45.0% | |
| ! | GAGATTTTTCCGGTGAGAAG+AGG | - | Chr5:70155432-70155451 | None:intergenic | 45.0% |
| ! | GCTTCCAAAGGAGCTTCTTT+TGG | - | Chr5:70156059-70156078 | None:intergenic | 45.0% |
| ! | GGAACCGTAACCAATCCTTT+TGG | + | Chr5:70156014-70156033 | MsG0580027876.01.T01:CDS | 45.0% |
| ! | GTTATGATGACCCTTTGGGA+TGG | - | Chr5:70155486-70155505 | None:intergenic | 45.0% |
| AAAAGGTCCCCAGCATAACC+AGG | - | Chr5:70156122-70156141 | None:intergenic | 50.0% | |
| AACCATATGTTGCCACGTGG+TGG | + | Chr5:70155556-70155575 | MsG0580027876.01.T01:CDS | 50.0% | |
| CACAACCATATGTTGCCACG+TGG | + | Chr5:70155553-70155572 | MsG0580027876.01.T01:CDS | 50.0% | |
| GCAACCAATGGTGCACTTTG+TGG | - | Chr5:70155936-70155955 | None:intergenic | 50.0% | |
| GCTGCTGATGTGTTAGTCGA+CGG | + | Chr5:70155759-70155778 | MsG0580027876.01.T01:CDS | 50.0% | |
| GGAACCCACGGTTCTTCTTA+TGG | + | Chr5:70155801-70155820 | MsG0580027876.01.T01:CDS | 50.0% | |
| GGAGCTTATCCTGGTTATGC+TGG | + | Chr5:70156110-70156129 | MsG0580027876.01.T01:CDS | 50.0% | |
| GGTGCTAGCTACAACGCTAA+TGG | + | Chr5:70156158-70156177 | MsG0580027876.01.T01:CDS | 50.0% | |
| GGTTGCACCAAATAACGACG+TGG | + | Chr5:70155950-70155969 | MsG0580027876.01.T01:CDS | 50.0% | |
| GTGCACCATAAGAAGAACCG+TGG | - | Chr5:70155809-70155828 | None:intergenic | 50.0% | |
| TCAAGTAGGTGTGGAACCCA+CGG | + | Chr5:70155789-70155808 | MsG0580027876.01.T01:CDS | 50.0% | |
| TCTTATGGTGCACGCGTGAA+TGG | + | Chr5:70155816-70155835 | MsG0580027876.01.T01:CDS | 50.0% | |
| TGGTCCACAAAGTGCACCAT+TGG | + | Chr5:70155929-70155948 | MsG0580027876.01.T01:CDS | 50.0% | |
| TTCCACCACGTGGCAACATA+TGG | - | Chr5:70155561-70155580 | None:intergenic | 50.0% | |
| ! | AATGTGCTGGTCAATGCGCA+TGG | + | Chr5:70155886-70155905 | MsG0580027876.01.T01:CDS | 50.0% |
| ! | AGCTCCTTTGGAAGCTGCTT+CGG | + | Chr5:70156064-70156083 | MsG0580027876.01.T01:CDS | 50.0% |
| ! | TGGTTATGCTGGGGACCTTT+TGG | + | Chr5:70156121-70156140 | MsG0580027876.01.T01:CDS | 50.0% |
| ! | TTATGCTGGGGACCTTTTGG+TGG | + | Chr5:70156124-70156143 | MsG0580027876.01.T01:CDS | 50.0% |
| ! | TTCGGTTGATTTCCACCACG+TGG | - | Chr5:70155571-70155590 | None:intergenic | 50.0% |
| CAAGCCGAAGCAGCTTCCAA+AGG | - | Chr5:70156071-70156090 | None:intergenic | 55.0% | |
| CACAAAGGCCCTCTTCTCAC+CGG | + | Chr5:70155420-70155439 | MsG0580027876.01.T01:CDS | 55.0% | |
| CGACGTGGGTCTTGATGGAA+TGG | + | Chr5:70155965-70155984 | MsG0580027876.01.T01:CDS | 55.0% | |
| ! | GAAGCTGCTTCGGCTTGTAC+CGG | + | Chr5:70156074-70156093 | MsG0580027876.01.T01:CDS | 55.0% |
| CGGTGAGAAGAGGGCCTTTG+TGG | - | Chr5:70155422-70155441 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 70155303 | 70156253 | 70155303 | ID=MsG0580027876.01;Name=MsG0580027876.01 |
| Chr5 | mRNA | 70155303 | 70156253 | 70155303 | ID=MsG0580027876.01.T01;Parent=MsG0580027876.01;Name=MsG0580027876.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|316 |
| Chr5 | exon | 70155303 | 70156253 | 70155303 | ID=MsG0580027876.01.T01:exon:25521;Parent=MsG0580027876.01.T01 |
| Chr5 | CDS | 70155303 | 70156253 | 70155303 | ID=MsG0580027876.01.T01:cds;Parent=MsG0580027876.01.T01 |
| Gene Sequence |
| Protein sequence |
