AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041583.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041583.01.T01 MTR_7g113890 85.374 588 42 6 1 576 1 556 0.0 991
MsG0780041583.01.T01 MTR_7g113880 68.511 524 139 4 54 576 47 545 0.0 728
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041583.01.T01 AT5G27380 66.935 496 140 3 80 575 67 538 0.0 706

Find 136 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATTTGGTACTTATTTA+AGG 0.124901 7:+92709770 MsG0780041583.01.T01:CDS
CTTGTAGAATTTCTCCTTCT+TGG 0.158760 7:-92707459 None:intergenic
GTCTCAGAACTTGGGATATT+TGG 0.168043 7:+92709757 MsG0780041583.01.T01:CDS
ACACCTGCCATCACCATTTA+TGG 0.172029 7:+92705513 MsG0780041583.01.T01:CDS
GCTTGCTTCCATTTACTTTC+TGG 0.184316 7:-92706092 None:intergenic
TAGAGCACCTCTAACTTATC+TGG 0.247256 7:+92710020 MsG0780041583.01.T01:three_prime_UTR
GCTGCTGCTGCTTCTGCTTT+TGG 0.247919 7:+92705339 MsG0780041583.01.T01:CDS
AAGTTCCTGTTGAATCTTCT+TGG 0.247926 7:-92708350 None:intergenic
TAGCCAAGGCCTCGGCATTC+TGG 0.248762 7:-92707023 None:intergenic
CGTCATTTCCAGAAAGTAAA+TGG 0.257725 7:+92706084 MsG0780041583.01.T01:CDS
AAAACTGCAGCAGAAGTATT+TGG 0.268628 7:-92709700 None:intergenic
ATTCTGGCTGACAGCATTAT+TGG 0.283845 7:-92707007 None:intergenic
AGCTTATGATGCTCTTGTTT+GGG 0.286202 7:+92705626 MsG0780041583.01.T01:CDS
CTCTATTTGCAAAAGGGATT+TGG 0.292630 7:-92706667 None:intergenic
TATCATTATGATTGTGGTTC+AGG 0.293008 7:+92707166 MsG0780041583.01.T01:CDS
AGGAGAAGGAGGAATGTATT+TGG 0.308769 7:-92705397 None:intergenic
GACTTGAATTTGCAGGAATA+AGG 0.309020 7:+92709879 MsG0780041583.01.T01:intron
CAGTTGCAGTCATTTACTTC+AGG 0.313042 7:+92707607 MsG0780041583.01.T01:CDS
CTTTGCAGGACTGTGGAGTT+TGG 0.317810 7:+92709413 MsG0780041583.01.T01:CDS
GGCTTCATTACAAATAATTC+AGG 0.320071 7:-92709471 None:intergenic
ACAGGAGGCTCAAATGATAA+TGG 0.320779 7:-92710069 None:intergenic
CCCTTCAATATCGTATCATT+TGG 0.320965 7:+92708321 MsG0780041583.01.T01:CDS
CCATGGAAAATTGCTTGGTC+TGG 0.322664 7:+92706966 MsG0780041583.01.T01:CDS
TAGTACCTCCTCCTTCTCTC+TGG 0.326878 7:-92709494 None:intergenic
ACTATTTCATCTTCATTTGC+TGG 0.337912 7:+92706696 MsG0780041583.01.T01:CDS
TAGCTTATGATGCTCTTGTT+TGG 0.342114 7:+92705625 MsG0780041583.01.T01:CDS
AACTTAATAGGAAATAAGAT+TGG 0.357115 7:+92706608 MsG0780041583.01.T01:intron
TCTTTCCAATTACAGAAATC+AGG 0.362565 7:+92706011 MsG0780041583.01.T01:intron
CTTGTTTGGGCCTCTCTTCA+CGG 0.363437 7:+92705639 MsG0780041583.01.T01:CDS
AAAATGCGTGAATGCTTTGC+AGG 0.374193 7:+92709399 MsG0780041583.01.T01:CDS
GTTGACCGTGTTAGTTTAGA+TGG 0.384757 7:+92706146 MsG0780041583.01.T01:CDS
CTCTCTTCACGGTCTCCTCA+TGG 0.391323 7:+92705650 MsG0780041583.01.T01:CDS
ATGGAAGCAAGCTTCTGATT+TGG 0.394917 7:+92706103 MsG0780041583.01.T01:CDS
CAGCCAGAATGCCGAGGCCT+TGG 0.406436 7:+92707020 MsG0780041583.01.T01:CDS
GACCACGCCGTCTCAGAACT+TGG 0.416285 7:+92709748 MsG0780041583.01.T01:CDS
CGATACGATGTTGAAGCAAT+AGG 0.419718 7:+92705312 None:intergenic
CAGAAATCAGGAATGGTTCC+TGG 0.422349 7:+92706023 MsG0780041583.01.T01:intron
TTTGTTGAGCTGTAGCATCT+TGG 0.432576 7:-92706425 None:intergenic
TGTTGAGCTCTATTTGCAAA+AGG 0.432901 7:-92706674 None:intergenic
CTCATAAAATTGCAGAAAAC+GGG 0.433571 7:+92709634 MsG0780041583.01.T01:CDS
CAGGAGGCTCAAATGATAAT+GGG 0.436248 7:-92710068 None:intergenic
CCTCATAAAATTGCAGAAAA+CGG 0.438181 7:+92709633 MsG0780041583.01.T01:CDS
TCAACAAGTTCATTGAATAT+AGG 0.442386 7:-92706128 None:intergenic
AGTACCTCCTCCTTCTCTCT+GGG 0.443480 7:-92709493 None:intergenic
ACTTAATAGGAAATAAGATT+GGG 0.446606 7:+92706609 MsG0780041583.01.T01:intron
TACTTTCTGGAAATGACGTT+GGG 0.448557 7:-92706079 None:intergenic
AATATACCCAGATAAGTTAG+AGG 0.449017 7:-92710027 None:intergenic
TCAATATCGTATCATTTGGT+TGG 0.454140 7:+92708325 MsG0780041583.01.T01:CDS
GCTTGGTCTGGATTCAGAAA+AGG 0.454195 7:+92706978 MsG0780041583.01.T01:CDS
TGATGATGATGAGACATTAG+AGG 0.456067 7:-92705477 None:intergenic
TCTTGCCATGGAAAATTGCT+TGG 0.461118 7:+92706961 MsG0780041583.01.T01:CDS
GACGAAGGTGGGGTTGCAGC+TGG 0.464192 7:+92709961 MsG0780041583.01.T01:CDS
TGGACAAAGGTATTATTGTC+TGG 0.469663 7:-92705377 None:intergenic
GATTCTGAAGGATAATCAAC+TGG 0.471685 7:-92707642 None:intergenic
GTTGAGCTCTATTTGCAAAA+GGG 0.477698 7:-92706673 None:intergenic
GACGTTGGGAATAATGCAAA+CGG 0.479910 7:-92706065 None:intergenic
AGAGGCAGACAAATATAAAC+AGG 0.483894 7:-92710087 None:intergenic
AGTTTATAACTACGGTGATA+AGG 0.484715 7:-92707248 None:intergenic
ACGTTGGGAATAATGCAAAC+GGG 0.485054 7:-92706064 None:intergenic
GAATTTGCAGGAATAAGGAT+AGG 0.485387 7:+92709884 MsG0780041583.01.T01:intron
GAAGGAGAAATTCTACAAGA+TGG 0.488802 7:+92707463 MsG0780041583.01.T01:CDS
CATGGGAGATAAATCTTACC+AGG 0.493452 7:+92705668 MsG0780041583.01.T01:CDS
CTCTTGTCACTCAACTTCAT+AGG 0.498422 7:+92706727 MsG0780041583.01.T01:CDS
AGTTGCAGTCATTTACTTCA+GGG 0.502680 7:+92707608 MsG0780041583.01.T01:CDS
CCGAGGCCTTGGCTAAAGCT+TGG 0.504909 7:+92707031 MsG0780041583.01.T01:CDS
AGGTACATACTTTCTTGCCA+TGG 0.512977 7:+92706949 MsG0780041583.01.T01:intron
GCAGTCATTTACTTCAGGGC+TGG 0.514362 7:+92707612 MsG0780041583.01.T01:CDS
AGTATTGATCAACAACTTCT+CGG 0.516257 7:+92705597 MsG0780041583.01.T01:CDS
TCTCTTCACGGTCTCCTCAT+GGG 0.517899 7:+92705651 MsG0780041583.01.T01:CDS
CCAATTACAGAAATCAGGAA+TGG 0.520677 7:+92706016 MsG0780041583.01.T01:intron
TATTTATGGTGAAGCAGTGC+GGG 0.520781 7:+92709606 MsG0780041583.01.T01:CDS
CAGGGCTATCATTATGATTG+TGG 0.521933 7:+92707160 MsG0780041583.01.T01:intron
ACCAAATGATACGATATTGA+AGG 0.522355 7:-92708322 None:intergenic
TATCATCATCTGACGAAGGT+GGG 0.522364 7:+92709950 MsG0780041583.01.T01:CDS
TGGCTGACAGCATTATTGGC+AGG 0.526065 7:-92707003 None:intergenic
TGGCACCAAGAAGATTCAAC+AGG 0.526530 7:+92708345 MsG0780041583.01.T01:CDS
AATTTGCAGGAATAAGGATA+GGG 0.531981 7:+92709885 MsG0780041583.01.T01:intron
ATCAGGAATGGTTCCTGGTG+TGG 0.532782 7:+92706028 MsG0780041583.01.T01:CDS
CAACAGGAACTTGCAAAGCC+AGG 0.536479 7:+92708361 MsG0780041583.01.T01:CDS
TGATAATCATCAGCGAATAG+AGG 0.539988 7:-92705573 None:intergenic
TTATACAAGGTAAAGAGAGA+AGG 0.542534 7:-92705437 None:intergenic
CCAAGCTTTAGCCAAGGCCT+CGG 0.543942 7:-92707031 None:intergenic
TCCTTAGCTTTGAACACGCA+TGG 0.547326 7:+92707400 MsG0780041583.01.T01:CDS
TCAGCGAATAGAGGAGGAGG+AGG 0.548874 7:-92705564 None:intergenic
ATATGCAGGAATGGAGAGCT+AGG 0.552197 7:+92708266 MsG0780041583.01.T01:intron
CAAAGCCAGGTGTTCTTGAG+AGG 0.552723 7:+92708374 MsG0780041583.01.T01:CDS
TCAGGAATGGTTCCTGGTGT+GGG 0.557885 7:+92706029 MsG0780041583.01.T01:CDS
GTAATGAAGCCCCAGAGAGA+AGG 0.558389 7:+92709483 MsG0780041583.01.T01:CDS
ATGAAGCCCCAGAGAGAAGG+AGG 0.563223 7:+92709486 MsG0780041583.01.T01:CDS
ACCATGCGTGTTCAAAGCTA+AGG 0.563501 7:-92707401 None:intergenic
TCGCCATAAATGGTGATGGC+AGG 0.565054 7:-92705516 None:intergenic
TTACTTTCTGGAAATGACGT+TGG 0.567133 7:-92706080 None:intergenic
TTCTTCAAGAATCTCTCTCA+AGG 0.567231 7:+92706174 MsG0780041583.01.T01:CDS
ATGGAGAGCTAGGCTACTGA+TGG 0.569626 7:+92708276 MsG0780041583.01.T01:CDS
TCATCAGCGAATAGAGGAGG+AGG 0.570573 7:-92705567 None:intergenic
TTCATCGCCATAAATGGTGA+TGG 0.571295 7:-92705520 None:intergenic
GAACAGCAGAAAGAAAATGC+TGG 0.573205 7:-92707211 None:intergenic
ATCATCATCTGACGAAGGTG+GGG 0.576564 7:+92709951 MsG0780041583.01.T01:CDS
TGGCCACTTACTGATTCTGA+AGG 0.580546 7:-92707654 None:intergenic
AGAGCACCTCTAACTTATCT+GGG 0.583038 7:+92710021 MsG0780041583.01.T01:three_prime_UTR
TCAATCCAGAACTAAGCAAG+TGG 0.583274 7:+92706369 MsG0780041583.01.T01:intron
CCAAATGATACGATATTGAA+GGG 0.583942 7:-92708321 None:intergenic
GGAGGAATGTATTTGGACAA+AGG 0.587129 7:-92705390 None:intergenic
ATGAATATCTAAAAGTCTAG+AGG 0.596316 7:-92706401 None:intergenic
TACAATTGTTCGCAAAACGA+TGG 0.597280 7:+92707426 MsG0780041583.01.T01:CDS
GTCGTCGAGAAATTTATACA+AGG 0.599831 7:-92705450 None:intergenic
CGATGTTGAAGCAATAGGCA+TGG 0.604299 7:+92705317 None:intergenic
ATATCATCATCTGACGAAGG+TGG 0.604927 7:+92709949 MsG0780041583.01.T01:CDS
TGTAACTATACAACACACCA+TGG 0.605619 7:-92710157 None:intergenic
GCATGCATCAATCCCACACC+AGG 0.606616 7:-92706041 None:intergenic
AGATACCTCTCAAGAACACC+TGG 0.608405 7:-92708379 None:intergenic
ATGGCAGAAGTTGACCAAGA+AGG 0.613185 7:+92707445 MsG0780041583.01.T01:CDS
ACCACGCCGTCTCAGAACTT+GGG 0.613931 7:+92709749 MsG0780041583.01.T01:CDS
CATGAGGAGACCGTGAAGAG+AGG 0.614477 7:-92705649 None:intergenic
AAGCCCCAGAGAGAAGGAGG+AGG 0.623964 7:+92709489 MsG0780041583.01.T01:CDS
AAATATCCCAAGTTCTGAGA+CGG 0.625935 7:-92709755 None:intergenic
ACTGTGGAGTTTGGATGACT+CGG 0.630953 7:+92709422 MsG0780041583.01.T01:CDS
GGAGTGAGTATAATAACCCC+AGG 0.633676 7:+92707052 MsG0780041583.01.T01:CDS
CTCACTCCAAGCTTTAGCCA+AGG 0.636780 7:-92707037 None:intergenic
TGCTGTCAGCCAGAATGCCG+AGG 0.640820 7:+92707014 MsG0780041583.01.T01:CDS
GCGTAATGGTTGTTGGCACA+AGG 0.648992 7:+92709726 MsG0780041583.01.T01:CDS
CAGCTTACATACTTATGCAG+AGG 0.649813 7:+92709671 MsG0780041583.01.T01:CDS
CGTTGGGAATAATGCAAACG+GGG 0.650289 7:-92706063 None:intergenic
GTACCTCCTCCTTCTCTCTG+GGG 0.656439 7:-92709492 None:intergenic
TCCCAAGTTCTGAGACGGCG+TGG 0.660655 7:-92709750 None:intergenic
AAAATATCATCATCTGACGA+AGG 0.662845 7:+92709946 MsG0780041583.01.T01:CDS
GGCAGACAAATATAAACAGG+AGG 0.666515 7:-92710084 None:intergenic
TAATCATCAGCGAATAGAGG+AGG 0.667692 7:-92705570 None:intergenic
GTTGTCGTGAATAATCAAAG+TGG 0.670695 7:+92709907 MsG0780041583.01.T01:CDS
GTAACTATACAACACACCAT+GGG 0.672655 7:-92710156 None:intergenic
GAGGTGCTCTACATCAAGTG+AGG 0.688457 7:-92710008 None:intergenic
ATATTTATGGTGAAGCAGTG+CGG 0.689917 7:+92709605 MsG0780041583.01.T01:CDS
ATTCACCATCTAAACTAACA+CGG 0.698126 7:-92706151 None:intergenic
GGTAAGATTTATCTCCCATG+AGG 0.699020 7:-92705665 None:intergenic
GTGAATGCTTTGCAGGACTG+TGG 0.717162 7:+92709406 MsG0780041583.01.T01:CDS
ATAACGTAAAATAAACAACG+TGG 0.837611 7:-92710133 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACAAATCAATATATTT+TGG - Chr7:92709282-92709301 None:intergenic 10.0%
!!! TATGTTTTTTTTTTATAAAG+TGG + Chr7:92706538-92706557 MsG0780041583.01.T01:intron 10.0%
!!! TTTATATTTTAAACATATTC+TGG + Chr7:92707363-92707382 MsG0780041583.01.T01:intron 10.0%
!! GTTTAAATATTTATCTTATC+CGG + Chr7:92709014-92709033 MsG0780041583.01.T01:intron 15.0%
!! TCAACAAATAATATAACTTA+TGG - Chr7:92707990-92708009 None:intergenic 15.0%
!!! AAGTTATATTATTTGTTGAT+TGG + Chr7:92707991-92708010 MsG0780041583.01.T01:intron 15.0%
!! AAAGTGTAGTTTATCATATA+AGG + Chr7:92707329-92707348 MsG0780041583.01.T01:intron 20.0%
!! AAATGAAAATAAGAAGAAGA+AGG - Chr7:92705703-92705722 None:intergenic 20.0%
!! AACAAGATATGAAAAAGATA+TGG - Chr7:92708669-92708688 None:intergenic 20.0%
!! AACTTAATAGGAAATAAGAT+TGG + Chr7:92706608-92706627 MsG0780041583.01.T01:intron 20.0%
!! ACTTAATAGGAAATAAGATT+GGG + Chr7:92706609-92706628 MsG0780041583.01.T01:intron 20.0%
!! ATTTGAGCTGTAAATAAATT+AGG + Chr7:92705945-92705964 MsG0780041583.01.T01:intron 20.0%
!! CATAGTAATTTACAAAATCA+CGG + Chr7:92705828-92705847 MsG0780041583.01.T01:intron 20.0%
!! CATGATTAATCAAATAAGTA+AGG - Chr7:92708571-92708590 None:intergenic 20.0%
!! CTATTGTAAGTTTATAACTA+CGG - Chr7:92707259-92707278 None:intergenic 20.0%
!! CTTACTTATTTGATTAATCA+TGG + Chr7:92708569-92708588 MsG0780041583.01.T01:intron 20.0%
!! GAAAAAAAAGCAAAATAAGA+AGG + Chr7:92709092-92709111 MsG0780041583.01.T01:intron 20.0%
!! GTTTGAAAAAAGTAATCTAA+CGG - Chr7:92708083-92708102 None:intergenic 20.0%
!! TAATCTAACGGTAAAAAAAA+AGG - Chr7:92708071-92708090 None:intergenic 20.0%
!! TATTTGATTAATCATGGATA+TGG + Chr7:92708575-92708594 MsG0780041583.01.T01:intron 20.0%
!! TTTAAAAATATGAACAAGCA+AGG + Chr7:92705968-92705987 MsG0780041583.01.T01:intron 20.0%
!!! AAAAAATCATTTTGGATGAT+CGG + Chr7:92709118-92709137 MsG0780041583.01.T01:intron 20.0%
!!! AATATAATTTTCAACAGAGT+TGG - Chr7:92709555-92709574 None:intergenic 20.0%
!!! AATTTTGGAAGAAAAATTGA+AGG - Chr7:92709058-92709077 None:intergenic 20.0%
!!! ATGATCTGTAATTATTTTTC+AGG + Chr7:92709577-92709596 MsG0780041583.01.T01:intron 20.0%
!!! CAATTTTTTTACTGTAGTAA+TGG + Chr7:92707579-92707598 MsG0780041583.01.T01:CDS 20.0%
!!! GAAGGAAAAAAAAATCATTT+TGG + Chr7:92709110-92709129 MsG0780041583.01.T01:intron 20.0%
!!! TATATTATTTGTTGATTGGT+CGG + Chr7:92707995-92708014 MsG0780041583.01.T01:intron 20.0%
!!! TGATATATTACTTTTACTGT+TGG + Chr7:92706576-92706595 MsG0780041583.01.T01:intron 20.0%
!!! TTTTCAGGAAACAATATTTA+TGG + Chr7:92709592-92709611 MsG0780041583.01.T01:intron 20.0%
!!! TTTTTTATAAAGTGGATCAA+AGG + Chr7:92706546-92706565 MsG0780041583.01.T01:intron 20.0%
! AAACCAACAGAACAAAAATA+AGG - Chr7:92707866-92707885 None:intergenic 25.0%
! AAACTCATTGTAAAACCAAA+CGG - Chr7:92705800-92705819 None:intergenic 25.0%
! AACAATAACTGAAAAAAGCA+AGG - Chr7:92708429-92708448 None:intergenic 25.0%
! AACTCATTATCTGAAAGATT+AGG + Chr7:92707749-92707768 MsG0780041583.01.T01:intron 25.0%
! AAGATAAATAACTTCCAGTT+TGG + Chr7:92707945-92707964 MsG0780041583.01.T01:intron 25.0%
! ACAAGCAAGAAAAAATAAAC+TGG - Chr7:92707677-92707696 None:intergenic 25.0%
! AGAATAAAGTGAACTGAAAA+AGG - Chr7:92707099-92707118 None:intergenic 25.0%
! ATAACGTAAAATAAACAACG+TGG - Chr7:92710136-92710155 None:intergenic 25.0%
! ATACTTCCTATTATGGTTAT+AGG + Chr7:92709174-92709193 MsG0780041583.01.T01:intron 25.0%
! ATGAATATCTAAAAGTCTAG+AGG - Chr7:92706404-92706423 None:intergenic 25.0%
! ATTATCTGAAAGATTAGGAA+AGG + Chr7:92707754-92707773 MsG0780041583.01.T01:intron 25.0%
! ATTCTTATTCATTGTCAAGT+GGG + Chr7:92706237-92706256 MsG0780041583.01.T01:intron 25.0%
! GAAGTGAAACAAATATCTAA+AGG - Chr7:92706811-92706830 None:intergenic 25.0%
! GCTTAGTAAAAATGAGTTTA+TGG - Chr7:92705764-92705783 None:intergenic 25.0%
! GGAAGTTATTTATCTTCAAA+AGG - Chr7:92707941-92707960 None:intergenic 25.0%
! GGATATTTGGTACTTATTTA+AGG + Chr7:92709770-92709789 MsG0780041583.01.T01:CDS 25.0%
! GTAATTCCTATAACCATAAT+AGG - Chr7:92709183-92709202 None:intergenic 25.0%
! TATTCTTATTCATTGTCAAG+TGG + Chr7:92706236-92706255 MsG0780041583.01.T01:intron 25.0%
! TCAACAAGTTCATTGAATAT+AGG - Chr7:92706131-92706150 None:intergenic 25.0%
! TCTGCAAAAAATTGAAAGAA+GGG + Chr7:92710107-92710126 MsG0780041583.01.T01:three_prime_UTR 25.0%
! TGACAATTAAAAGCTGAAAA+TGG - Chr7:92706324-92706343 None:intergenic 25.0%
! TGGAATCATTCAGAAATATA+AGG - Chr7:92707138-92707157 None:intergenic 25.0%
! TTAATCAAATAAGTAAGGCA+TGG - Chr7:92708566-92708585 None:intergenic 25.0%
!! AAAATTGAAGGTACAAGAAA+AGG - Chr7:92709046-92709065 None:intergenic 25.0%
!! AAATTGAAGGTACAAGAAAA+GGG - Chr7:92709045-92709064 None:intergenic 25.0%
!! CTTTATTCTACTGCTAATTT+TGG + Chr7:92707110-92707129 MsG0780041583.01.T01:intron 25.0%
!! GAAAAAGGATATTTGTTTCT+CGG - Chr7:92707084-92707103 None:intergenic 25.0%
!! TGGCATCAATTTAACTTAAT+AGG + Chr7:92706596-92706615 MsG0780041583.01.T01:intron 25.0%
AAAACAATTCAATCCTCTCT+AGG - Chr7:92708960-92708979 None:intergenic 30.0%
AAAATATCATCATCTGACGA+AGG + Chr7:92709946-92709965 MsG0780041583.01.T01:CDS 30.0%
AAATCACAAACCGAAACAAT+TGG - Chr7:92706926-92706945 None:intergenic 30.0%
AATATACCCAGATAAGTTAG+AGG - Chr7:92710030-92710049 None:intergenic 30.0%
AATCACAAACCGAAACAATT+GGG - Chr7:92706925-92706944 None:intergenic 30.0%
AATTTGCAGGAATAAGGATA+GGG + Chr7:92709885-92709904 MsG0780041583.01.T01:intron 30.0%
ACCAAATGATACGATATTGA+AGG - Chr7:92708325-92708344 None:intergenic 30.0%
ACCTCAATCTTTCTATTCTA+TGG + Chr7:92708125-92708144 MsG0780041583.01.T01:intron 30.0%
ACTATTTCATCTTCATTTGC+TGG + Chr7:92706696-92706715 MsG0780041583.01.T01:CDS 30.0%
AGTGAAGTGAATTAGTAGAA+CGG - Chr7:92706201-92706220 None:intergenic 30.0%
AGTTTATAACTACGGTGATA+AGG - Chr7:92707251-92707270 None:intergenic 30.0%
ATGGAAAAGACGTAGAAAAA+AGG - Chr7:92706305-92706324 None:intergenic 30.0%
ATTCACCATCTAAACTAACA+CGG - Chr7:92706154-92706173 None:intergenic 30.0%
ATTTCTGAATGATTCCATAC+AGG + Chr7:92707141-92707160 MsG0780041583.01.T01:intron 30.0%
CCAAATGATACGATATTGAA+GGG - Chr7:92708324-92708343 None:intergenic 30.0%
CCAACCAATCAAATCATAAA+TGG - Chr7:92708610-92708629 None:intergenic 30.0%
CCATTTATGATTTGATTGGT+TGG + Chr7:92708607-92708626 MsG0780041583.01.T01:intron 30.0%
CCTCATAAAATTGCAGAAAA+CGG + Chr7:92709633-92709652 MsG0780041583.01.T01:CDS 30.0%
CGCAACTAATCATGATTTAA+CGG + Chr7:92708895-92708914 MsG0780041583.01.T01:intron 30.0%
CTCATAAAATTGCAGAAAAC+GGG + Chr7:92709634-92709653 MsG0780041583.01.T01:CDS 30.0%
CTCTGCAAAAAATTGAAAGA+AGG + Chr7:92710106-92710125 MsG0780041583.01.T01:three_prime_UTR 30.0%
GACTATATATCTCTATAGCT+CGG + Chr7:92709803-92709822 MsG0780041583.01.T01:intron 30.0%
GCAACTAATCATGATTTAAC+GGG + Chr7:92708896-92708915 MsG0780041583.01.T01:intron 30.0%
GGCTTCATTACAAATAATTC+AGG - Chr7:92709474-92709493 None:intergenic 30.0%
TAAAGAAAGTCAGTTTCTGA+TGG - Chr7:92707516-92707535 None:intergenic 30.0%
TACACTCATACTTCCTATTA+TGG + Chr7:92709167-92709186 MsG0780041583.01.T01:intron 30.0%
TATCATTATGATTGTGGTTC+AGG + Chr7:92707166-92707185 MsG0780041583.01.T01:CDS 30.0%
TATGTAGCGTTATTGTGAAA+AGG - Chr7:92706511-92706530 None:intergenic 30.0%
TCAATATCGTATCATTTGGT+TGG + Chr7:92708325-92708344 MsG0780041583.01.T01:CDS 30.0%
TCATAAGAATGAATTCAACG+CGG + Chr7:92708849-92708868 MsG0780041583.01.T01:intron 30.0%
TCCATAGAATAGAAAGATTG+AGG - Chr7:92708129-92708148 None:intergenic 30.0%
TCTTTCCAATTACAGAAATC+AGG + Chr7:92706011-92706030 MsG0780041583.01.T01:intron 30.0%
TGCATCGTTAATAACTGAAA+CGG + Chr7:92708749-92708768 MsG0780041583.01.T01:intron 30.0%
TGTAAATGAATATGTTCCCT+TGG + Chr7:92709141-92709160 MsG0780041583.01.T01:intron 30.0%
TTATACAAGGTAAAGAGAGA+AGG - Chr7:92705440-92705459 None:intergenic 30.0%
TTTCTGAATGATTCCATACA+GGG + Chr7:92707142-92707161 MsG0780041583.01.T01:intron 30.0%
! AAAGTTAGATCACGTTTTAG+GGG - Chr7:92709523-92709542 None:intergenic 30.0%
! AATTGAAGGTACAAGAAAAG+GGG - Chr7:92709044-92709063 None:intergenic 30.0%
! ACTGACTTTCTTTAAGTTTG+TGG + Chr7:92707522-92707541 MsG0780041583.01.T01:intron 30.0%
! AGAAAGTTAGATCACGTTTT+AGG - Chr7:92709525-92709544 None:intergenic 30.0%
! CAAGACAGAACAAGTAATTT+TGG - Chr7:92709073-92709092 None:intergenic 30.0%
! CGTTAAATCATGATTAGTTG+CGG - Chr7:92708897-92708916 None:intergenic 30.0%
! CGTTTTCTGCAATTTTATGA+GGG - Chr7:92709635-92709654 None:intergenic 30.0%
! GAAAGTTAGATCACGTTTTA+GGG - Chr7:92709524-92709543 None:intergenic 30.0%
! TATGGAACTCAACTATTTTG+AGG - Chr7:92707972-92707991 None:intergenic 30.0%
! TTTTTCTGACCCAATTGTTT+CGG + Chr7:92706913-92706932 MsG0780041583.01.T01:intron 30.0%
!! AAAAGGTGTTCAATACTTGT+AGG - Chr7:92707924-92707943 None:intergenic 30.0%
!! AAAATTCTGAGGTGAAACAT+AGG - Chr7:92706896-92706915 None:intergenic 30.0%
!! AAATTCTGAGGTGAAACATA+GGG - Chr7:92706895-92706914 None:intergenic 30.0%
!! AGTATTGATCAACAACTTCT+CGG + Chr7:92705597-92705616 MsG0780041583.01.T01:CDS 30.0%
!! GTTTTGATGTTAGAGAAAAC+TGG + Chr7:92708871-92708890 MsG0780041583.01.T01:intron 30.0%
!!! CAGTTTTGATTCAAGGATTT+AGG - Chr7:92709344-92709363 None:intergenic 30.0%
!!! CTTCTTTCAATTTTTTGCAG+AGG - Chr7:92710108-92710127 None:intergenic 30.0%
!!! GTTTATTTTACGTTATCCCA+TGG + Chr7:92710140-92710159 MsG0780041583.01.T01:three_prime_UTR 30.0%
AAGTATGAGTGTAGTTCCAA+GGG - Chr7:92709160-92709179 None:intergenic 35.0%
AAGTTCCTGTTGAATCTTCT+TGG - Chr7:92708353-92708372 None:intergenic 35.0%
AATAACTGAAACGGAAGGTT+TGG + Chr7:92708758-92708777 MsG0780041583.01.T01:intron 35.0%
ACCAAACCAAACAAACGAAA+AGG - Chr7:92706267-92706286 None:intergenic 35.0%
ACTTACTCAATATGCAGGAA+TGG + Chr7:92708257-92708276 MsG0780041583.01.T01:intron 35.0%
AGAACATAAGATCCAGAAGA+AGG - Chr7:92708538-92708557 None:intergenic 35.0%
AGAGGCAGACAAATATAAAC+AGG - Chr7:92710090-92710109 None:intergenic 35.0%
AGTTGCAGTCATTTACTTCA+GGG + Chr7:92707608-92707627 MsG0780041583.01.T01:CDS 35.0%
ATACCCTCTGATATCACATT+TGG - Chr7:92707309-92707328 None:intergenic 35.0%
ATATTTATGGTGAAGCAGTG+CGG + Chr7:92709605-92709624 MsG0780041583.01.T01:CDS 35.0%
ATCATAATGATAGCCCTGTA+TGG - Chr7:92707158-92707177 None:intergenic 35.0%
ATCATACCAGGTAATTCAGT+GGG - Chr7:92707784-92707803 None:intergenic 35.0%
ATTGTAAAACCAAACGGTGA+TGG - Chr7:92705794-92705813 None:intergenic 35.0%
CAAATAAGTAAGGCATGGAT+TGG - Chr7:92708561-92708580 None:intergenic 35.0%
CCAAACCAAACAAACGAAAA+GGG - Chr7:92706266-92706285 None:intergenic 35.0%
CCAACAGAACAAAAATAAGG+TGG - Chr7:92707863-92707882 None:intergenic 35.0%
CCAATCAAATCATAAATGGC+TGG - Chr7:92708606-92708625 None:intergenic 35.0%
CCAATTACAGAAATCAGGAA+TGG + Chr7:92706016-92706035 MsG0780041583.01.T01:intron 35.0%
CCAGCCATTTATGATTTGAT+TGG + Chr7:92708603-92708622 MsG0780041583.01.T01:intron 35.0%
CCATTCCTGATTTCTGTAAT+TGG - Chr7:92706019-92706038 None:intergenic 35.0%
CCCTTCAATATCGTATCATT+TGG + Chr7:92708321-92708340 MsG0780041583.01.T01:CDS 35.0%
CGTCATTTCCAGAAAGTAAA+TGG + Chr7:92706084-92706103 MsG0780041583.01.T01:CDS 35.0%
CTACCAAATGTGATATCAGA+GGG + Chr7:92707303-92707322 MsG0780041583.01.T01:intron 35.0%
CTCTATTTGCAAAAGGGATT+TGG - Chr7:92706670-92706689 None:intergenic 35.0%
CTTGAATCAAAACTGTAAGC+AGG + Chr7:92709349-92709368 MsG0780041583.01.T01:intron 35.0%
CTTGTAGAATTTCTCCTTCT+TGG - Chr7:92707462-92707481 None:intergenic 35.0%
GAACTCATTGTCAGGATAAA+AGG - Chr7:92708214-92708233 None:intergenic 35.0%
GAAGGAGAAATTCTACAAGA+TGG + Chr7:92707463-92707482 MsG0780041583.01.T01:CDS 35.0%
GAATTTGCAGGAATAAGGAT+AGG + Chr7:92709884-92709903 MsG0780041583.01.T01:intron 35.0%
GACTTGAATTTGCAGGAATA+AGG + Chr7:92709879-92709898 MsG0780041583.01.T01:intron 35.0%
GCAAAAAATTGAAAGAAGGG+AGG + Chr7:92710110-92710129 MsG0780041583.01.T01:three_prime_UTR 35.0%
GCAAAAGAGATGAAAAACAG+AGG - Chr7:92706870-92706889 None:intergenic 35.0%
GCATAACTTACTCAATATGC+AGG + Chr7:92708252-92708271 MsG0780041583.01.T01:intron 35.0%
GTAACTATACAACACACCAT+GGG - Chr7:92710159-92710178 None:intergenic 35.0%
GTCGTCGAGAAATTTATACA+AGG - Chr7:92705453-92705472 None:intergenic 35.0%
GTTGAGCTCTATTTGCAAAA+GGG - Chr7:92706676-92706695 None:intergenic 35.0%
GTTGTCGTGAATAATCAAAG+TGG + Chr7:92709907-92709926 MsG0780041583.01.T01:CDS 35.0%
TACAATTGTTCGCAAAACGA+TGG + Chr7:92707426-92707445 MsG0780041583.01.T01:CDS 35.0%
TAGCTTATGATGCTCTTGTT+TGG + Chr7:92705625-92705644 MsG0780041583.01.T01:CDS 35.0%
TATCCTTCAGAATCAGTAAG+TGG + Chr7:92707651-92707670 MsG0780041583.01.T01:intron 35.0%
TCGTTAATAACTGAAACGGA+AGG + Chr7:92708753-92708772 MsG0780041583.01.T01:intron 35.0%
TGATAATCATCAGCGAATAG+AGG - Chr7:92705576-92705595 None:intergenic 35.0%
TGGAATTAAGCATGCATGTT+TGG + Chr7:92705918-92705937 MsG0780041583.01.T01:intron 35.0%
TGTAACTATACAACACACCA+TGG - Chr7:92710160-92710179 None:intergenic 35.0%
TGTTGAGCTCTATTTGCAAA+AGG - Chr7:92706677-92706696 None:intergenic 35.0%
TTCTTCAAGAATCTCTCTCA+AGG + Chr7:92706174-92706193 MsG0780041583.01.T01:CDS 35.0%
TTGGGTCAGAAAAAATTCTG+AGG - Chr7:92706907-92706926 None:intergenic 35.0%
! AATTGCGCTTTTACATCGTA+AGG + Chr7:92707704-92707723 MsG0780041583.01.T01:intron 35.0%
! AGCTTATGATGCTCTTGTTT+GGG + Chr7:92705626-92705645 MsG0780041583.01.T01:CDS 35.0%
! CCGTTTTCTGCAATTTTATG+AGG - Chr7:92709636-92709655 None:intergenic 35.0%
! GATTCTGAAGGATAATCAAC+TGG - Chr7:92707645-92707664 None:intergenic 35.0%
! GGTAGCTATATTGGTTAAAG+TGG + Chr7:92706457-92706476 MsG0780041583.01.T01:intron 35.0%
! TACTTTCTGGAAATGACGTT+GGG - Chr7:92706082-92706101 None:intergenic 35.0%
! TGATGATGATGAGACATTAG+AGG - Chr7:92705480-92705499 None:intergenic 35.0%
! TTACTTTCTGGAAATGACGT+TGG - Chr7:92706083-92706102 None:intergenic 35.0%
! TTTCTTAGATGAAAGTGCGA+GGG - Chr7:92709258-92709277 None:intergenic 35.0%
! TTTTGATGCGTAATGGTTGT+TGG + Chr7:92709719-92709738 MsG0780041583.01.T01:CDS 35.0%
!! AAAACTGCAGCAGAAGTATT+TGG - Chr7:92709703-92709722 None:intergenic 35.0%
!! AAATATCCCAAGTTCTGAGA+CGG - Chr7:92709758-92709777 None:intergenic 35.0%
!! GTTTCGGTTTGTGATTTTTC+AGG + Chr7:92706929-92706948 MsG0780041583.01.T01:intron 35.0%
!! GTTTTGTTCATCGCCATAAA+TGG - Chr7:92705529-92705548 None:intergenic 35.0%
!! TGGACAAAGGTATTATTGTC+TGG - Chr7:92705380-92705399 None:intergenic 35.0%
!! TTTTCTTAGATGAAAGTGCG+AGG - Chr7:92709259-92709278 None:intergenic 35.0%
!!! AACTATTTTGAGGTCCAAAC+TGG - Chr7:92707962-92707981 None:intergenic 35.0%
!!! AGAAGGTTGTTGTTTTTGTG+AGG - Chr7:92705423-92705442 None:intergenic 35.0%
!!! CCACCTTATTTTTGTTCTGT+TGG + Chr7:92707860-92707879 MsG0780041583.01.T01:intron 35.0%
!!! CGATATCGTCTTTGTTTTCA+AGG - Chr7:92709377-92709396 None:intergenic 35.0%
!!! CTGCTTACAGTTTTGATTCA+AGG - Chr7:92709351-92709370 None:intergenic 35.0%
AAAATGCGTGAATGCTTTGC+AGG + Chr7:92709399-92709418 MsG0780041583.01.T01:CDS 40.0%
AAAGAGGTCGGTAGCTATAT+TGG + Chr7:92706448-92706467 MsG0780041583.01.T01:intron 40.0%
ACAGGAGGCTCAAATGATAA+TGG - Chr7:92710072-92710091 None:intergenic 40.0%
ACGTTGGGAATAATGCAAAC+GGG - Chr7:92706067-92706086 None:intergenic 40.0%
AGCAATGAGAACTCATTGTC+AGG - Chr7:92708222-92708241 None:intergenic 40.0%
AGGAGAAGGAGGAATGTATT+TGG - Chr7:92705400-92705419 None:intergenic 40.0%
AGGTACATACTTTCTTGCCA+TGG + Chr7:92706949-92706968 MsG0780041583.01.T01:intron 40.0%
AGTTCTCATTGCTCATGCTT+TGG + Chr7:92708229-92708248 MsG0780041583.01.T01:intron 40.0%
ATATCATCATCTGACGAAGG+TGG + Chr7:92709949-92709968 MsG0780041583.01.T01:CDS 40.0%
ATGGAAGCAAGCTTCTGATT+TGG + Chr7:92706103-92706122 MsG0780041583.01.T01:CDS 40.0%
ATTCAGAACTCTTCCTAGAG+AGG + Chr7:92708944-92708963 MsG0780041583.01.T01:intron 40.0%
CAGCTCAACAAAAAAGAGGT+CGG + Chr7:92706436-92706455 MsG0780041583.01.T01:intron 40.0%
CAGCTTACATACTTATGCAG+AGG + Chr7:92709671-92709690 MsG0780041583.01.T01:CDS 40.0%
CAGGAGGCTCAAATGATAAT+GGG - Chr7:92710071-92710090 None:intergenic 40.0%
CAGGGCTATCATTATGATTG+TGG + Chr7:92707160-92707179 MsG0780041583.01.T01:intron 40.0%
CAGTTGCAGTCATTTACTTC+AGG + Chr7:92707607-92707626 MsG0780041583.01.T01:CDS 40.0%
CATGGGAGATAAATCTTACC+AGG + Chr7:92705668-92705687 MsG0780041583.01.T01:CDS 40.0%
CTCTTGTCACTCAACTTCAT+AGG + Chr7:92706727-92706746 MsG0780041583.01.T01:CDS 40.0%
GAACAGCAGAAAGAAAATGC+TGG - Chr7:92707214-92707233 None:intergenic 40.0%
GAAGTATGAGTGTAGTTCCA+AGG - Chr7:92709161-92709180 None:intergenic 40.0%
GACGTTGGGAATAATGCAAA+CGG - Chr7:92706068-92706087 None:intergenic 40.0%
GATCATACCAGGTAATTCAG+TGG - Chr7:92707785-92707804 None:intergenic 40.0%
GCATGCTTAATTCCAAACTG+TGG - Chr7:92705913-92705932 None:intergenic 40.0%
GCTACAGCTCAACAAAAAAG+AGG + Chr7:92706432-92706451 MsG0780041583.01.T01:CDS 40.0%
GCTACCAAATGTGATATCAG+AGG + Chr7:92707302-92707321 MsG0780041583.01.T01:intron 40.0%
GCTTGCTTCCATTTACTTTC+TGG - Chr7:92706095-92706114 None:intergenic 40.0%
GGAACACTTTCTGTGTATGT+AGG + Chr7:92707484-92707503 MsG0780041583.01.T01:intron 40.0%
GGAGGAATGTATTTGGACAA+AGG - Chr7:92705393-92705412 None:intergenic 40.0%
GGCAGACAAATATAAACAGG+AGG - Chr7:92710087-92710106 None:intergenic 40.0%
GGTAAGATTTATCTCCCATG+AGG - Chr7:92705668-92705687 None:intergenic 40.0%
GTACAAGAAAAGGGGATAAC+CGG - Chr7:92709036-92709055 None:intergenic 40.0%
GTCTCAGAACTTGGGATATT+TGG + Chr7:92709757-92709776 MsG0780041583.01.T01:CDS 40.0%
GTTCTCATTGCTCATGCTTT+GGG + Chr7:92708230-92708249 MsG0780041583.01.T01:intron 40.0%
TAATCATCAGCGAATAGAGG+AGG - Chr7:92705573-92705592 None:intergenic 40.0%
TATCATCATCTGACGAAGGT+GGG + Chr7:92709950-92709969 MsG0780041583.01.T01:CDS 40.0%
TATTTATGGTGAAGCAGTGC+GGG + Chr7:92709606-92709625 MsG0780041583.01.T01:CDS 40.0%
TCAATCCAGAACTAAGCAAG+TGG + Chr7:92706369-92706388 MsG0780041583.01.T01:intron 40.0%
TCTTGCCATGGAAAATTGCT+TGG + Chr7:92706961-92706980 MsG0780041583.01.T01:CDS 40.0%
TTCATCGCCATAAATGGTGA+TGG - Chr7:92705523-92705542 None:intergenic 40.0%
TTGGTCACAAAGATCATACC+AGG - Chr7:92707796-92707815 None:intergenic 40.0%
TTTGTTGAGCTGTAGCATCT+TGG - Chr7:92706428-92706447 None:intergenic 40.0%
! ACAGCAGTCAGTTCTTCTTT+TGG - Chr7:92707815-92707834 None:intergenic 40.0%
! AGAGCACCTCTAACTTATCT+GGG + Chr7:92710021-92710040 MsG0780041583.01.T01:three_prime_UTR 40.0%
! ATTCTGGCTGACAGCATTAT+TGG - Chr7:92707010-92707029 None:intergenic 40.0%
! CCCTTTTCGTTTGTTTGGTT+TGG + Chr7:92706263-92706282 MsG0780041583.01.T01:intron 40.0%
! GAGGGCTTTGATAAAAACGT+AGG + Chr7:92708787-92708806 MsG0780041583.01.T01:intron 40.0%
! GGCTTTGATAAAAACGTAGG+TGG + Chr7:92708790-92708809 MsG0780041583.01.T01:intron 40.0%
! GTTGACCGTGTTAGTTTAGA+TGG + Chr7:92706146-92706165 MsG0780041583.01.T01:CDS 40.0%
! TAGAGCACCTCTAACTTATC+TGG + Chr7:92710020-92710039 MsG0780041583.01.T01:three_prime_UTR 40.0%
! TTAGTCCATGTTTCTATCCG+TGG + Chr7:92705878-92705897 MsG0780041583.01.T01:intron 40.0%
! TTGTTTCTCGGATCTAACCT+GGG - Chr7:92707072-92707091 None:intergenic 40.0%
! TTTGTTTCTCGGATCTAACC+TGG - Chr7:92707073-92707092 None:intergenic 40.0%
!!! AGGTTGTTGTTTTTGTGAGG+AGG - Chr7:92705420-92705439 None:intergenic 40.0%
!!! TTGTTTTTGTGAGGAGGAGA+AGG - Chr7:92705414-92705433 None:intergenic 40.0%
AACTGTGGCAAAACTCACCA+CGG - Chr7:92705898-92705917 None:intergenic 45.0%
ACACCTGCCATCACCATTTA+TGG + Chr7:92705513-92705532 MsG0780041583.01.T01:CDS 45.0%
ACCATGCGTGTTCAAAGCTA+AGG - Chr7:92707404-92707423 None:intergenic 45.0%
ACTCACCACGGATAGAAACA+TGG - Chr7:92705886-92705905 None:intergenic 45.0%
ACTGTGGAGTTTGGATGACT+CGG + Chr7:92709422-92709441 MsG0780041583.01.T01:CDS 45.0%
AGAAGAAGGAGAAGAAGACC+TGG - Chr7:92705689-92705708 None:intergenic 45.0%
AGATACCTCTCAAGAACACC+TGG - Chr7:92708382-92708401 None:intergenic 45.0%
ATATGCAGGAATGGAGAGCT+AGG + Chr7:92708266-92708285 MsG0780041583.01.T01:intron 45.0%
ATCATCATCTGACGAAGGTG+GGG + Chr7:92709951-92709970 MsG0780041583.01.T01:CDS 45.0%
ATGGCAGAAGTTGACCAAGA+AGG + Chr7:92707445-92707464 MsG0780041583.01.T01:CDS 45.0%
CAGAAATCAGGAATGGTTCC+TGG + Chr7:92706023-92706042 MsG0780041583.01.T01:intron 45.0%
CCATGGAAAATTGCTTGGTC+TGG + Chr7:92706966-92706985 MsG0780041583.01.T01:CDS 45.0%
CGTAATGCTTAACATCCGCT+GGG + Chr7:92709857-92709876 MsG0780041583.01.T01:intron 45.0%
CGTTGGGAATAATGCAAACG+GGG - Chr7:92706066-92706085 None:intergenic 45.0%
GCTTGGTCTGGATTCAGAAA+AGG + Chr7:92706978-92706997 MsG0780041583.01.T01:CDS 45.0%
GGAGTGAGTATAATAACCCC+AGG + Chr7:92707052-92707071 MsG0780041583.01.T01:CDS 45.0%
GGTTAACCCACTGAATTACC+TGG + Chr7:92707775-92707794 MsG0780041583.01.T01:intron 45.0%
TGGCACCAAGAAGATTCAAC+AGG + Chr7:92708345-92708364 MsG0780041583.01.T01:CDS 45.0%
TGTTTCTCGGATCTAACCTG+GGG - Chr7:92707071-92707090 None:intergenic 45.0%
TTCGTCCACTTGCTTAGTTC+TGG - Chr7:92706377-92706396 None:intergenic 45.0%
! ACGGAAGGTTTGGAATAGTG+AGG + Chr7:92708768-92708787 MsG0780041583.01.T01:intron 45.0%
! CAAGCAGAAAAGCATAGGGT+CGG - Chr7:92708712-92708731 None:intergenic 45.0%
! CCAGACCAAGCAATTTTCCA+TGG - Chr7:92706969-92706988 None:intergenic 45.0%
! CGGAAGGTTTGGAATAGTGA+GGG + Chr7:92708769-92708788 MsG0780041583.01.T01:intron 45.0%
! GGTCACCCTTTTCGTTTGTT+TGG + Chr7:92706258-92706277 MsG0780041583.01.T01:intron 45.0%
! TGGCCAAGCAGAAAAGCATA+GGG - Chr7:92708716-92708735 None:intergenic 45.0%
! TGGTGAGTTTTGCCACAGTT+TGG + Chr7:92705898-92705917 MsG0780041583.01.T01:intron 45.0%
! TTTTTGTGAGGAGGAGAAGG+AGG - Chr7:92705411-92705430 None:intergenic 45.0%
!! GCTGCAGTTTTGATGCGTAA+TGG + Chr7:92709712-92709731 MsG0780041583.01.T01:CDS 45.0%
!! TCCTTAGCTTTGAACACGCA+TGG + Chr7:92707400-92707419 MsG0780041583.01.T01:CDS 45.0%
!! TGGCCACTTACTGATTCTGA+AGG - Chr7:92707657-92707676 None:intergenic 45.0%
AATAGAGGAGGAGGAGGAGA+AGG - Chr7:92705561-92705580 None:intergenic 50.0%
AGTACCTCCTCCTTCTCTCT+GGG - Chr7:92709496-92709515 None:intergenic 50.0%
ATCAGGAATGGTTCCTGGTG+TGG + Chr7:92706028-92706047 MsG0780041583.01.T01:CDS 50.0%
ATGGAGAGCTAGGCTACTGA+TGG + Chr7:92708276-92708295 MsG0780041583.01.T01:CDS 50.0%
CAAAGCCAGGTGTTCTTGAG+AGG + Chr7:92708374-92708393 MsG0780041583.01.T01:CDS 50.0%
CAACAGGAACTTGCAAAGCC+AGG + Chr7:92708361-92708380 MsG0780041583.01.T01:CDS 50.0%
CCTGCAAATTCAAGTCCCAG+CGG - Chr7:92709875-92709894 None:intergenic 50.0%
CGATGCATTCTTGCCACTAC+TGG - Chr7:92708736-92708755 None:intergenic 50.0%
CTTGTTTGGGCCTCTCTTCA+CGG + Chr7:92705639-92705658 MsG0780041583.01.T01:CDS 50.0%
CTTTGCAGGACTGTGGAGTT+TGG + Chr7:92709413-92709432 MsG0780041583.01.T01:CDS 50.0%
GAAGTGAGATCGCCTTCTTC+TGG + Chr7:92708523-92708542 MsG0780041583.01.T01:intron 50.0%
GCAGTCATTTACTTCAGGGC+TGG + Chr7:92707612-92707631 MsG0780041583.01.T01:CDS 50.0%
GCGTAATGCTTAACATCCGC+TGG + Chr7:92709856-92709875 MsG0780041583.01.T01:intron 50.0%
GCGTAATGGTTGTTGGCACA+AGG + Chr7:92709726-92709745 MsG0780041583.01.T01:CDS 50.0%
GTAATGAAGCCCCAGAGAGA+AGG + Chr7:92709483-92709502 MsG0780041583.01.T01:CDS 50.0%
GTGAATGCTTTGCAGGACTG+TGG + Chr7:92709406-92709425 MsG0780041583.01.T01:CDS 50.0%
TAGTACCTCCTCCTTCTCTC+TGG - Chr7:92709497-92709516 None:intergenic 50.0%
TCAGGAATGGTTCCTGGTGT+GGG + Chr7:92706029-92706048 MsG0780041583.01.T01:CDS 50.0%
TCATCAGCGAATAGAGGAGG+AGG - Chr7:92705570-92705589 None:intergenic 50.0%
TCTCTTCACGGTCTCCTCAT+GGG + Chr7:92705651-92705670 MsG0780041583.01.T01:CDS 50.0%
TGGCTGACAGCATTATTGGC+AGG - Chr7:92707006-92707025 None:intergenic 50.0%
! CGACCCTATGCTTTTCTGCT+TGG + Chr7:92708710-92708729 MsG0780041583.01.T01:intron 50.0%
! CTCACTCCAAGCTTTAGCCA+AGG - Chr7:92707040-92707059 None:intergenic 50.0%
! CTGGCCAAGCAGAAAAGCAT+AGG - Chr7:92708717-92708736 None:intergenic 50.0%
! CTTTTCTGCTTGGCCAGTAG+TGG + Chr7:92708720-92708739 MsG0780041583.01.T01:intron 50.0%
! GAGGTGCTCTACATCAAGTG+AGG - Chr7:92710011-92710030 None:intergenic 50.0%
! GTTGATTGGTCGGTACAGCT+TGG + Chr7:92708005-92708024 MsG0780041583.01.T01:intron 50.0%
!! ACCAAACGGTGATGGAGACA+TGG - Chr7:92705786-92705805 None:intergenic 50.0%
!! TCGCCATAAATGGTGATGGC+AGG - Chr7:92705519-92705538 None:intergenic 50.0%
ACCACGCCGTCTCAGAACTT+GGG + Chr7:92709749-92709768 MsG0780041583.01.T01:CDS 55.0%
ATGAAGCCCCAGAGAGAAGG+AGG + Chr7:92709486-92709505 MsG0780041583.01.T01:CDS 55.0%
CATGAGGAGACCGTGAAGAG+AGG - Chr7:92705652-92705671 None:intergenic 55.0%
CCGCTGGGACTTGAATTTGC+AGG + Chr7:92709872-92709891 MsG0780041583.01.T01:intron 55.0%
CTCTCTTCACGGTCTCCTCA+TGG + Chr7:92705650-92705669 MsG0780041583.01.T01:CDS 55.0%
GCATGCATCAATCCCACACC+AGG - Chr7:92706044-92706063 None:intergenic 55.0%
GCCATGTCTCCATCACCGTT+TGG + Chr7:92705782-92705801 MsG0780041583.01.T01:intron 55.0%
GTACCTCCTCCTTCTCTCTG+GGG - Chr7:92709495-92709514 None:intergenic 55.0%
TCAGCGAATAGAGGAGGAGG+AGG - Chr7:92705567-92705586 None:intergenic 55.0%
! CCAAGCTTTAGCCAAGGCCT+CGG - Chr7:92707034-92707053 None:intergenic 55.0%
!! GCTGCTGCTGCTTCTGCTTT+TGG + Chr7:92705339-92705358 MsG0780041583.01.T01:CDS 55.0%
AAGCCCCAGAGAGAAGGAGG+AGG + Chr7:92709489-92709508 MsG0780041583.01.T01:CDS 60.0%
CCGAGGCCTTGGCTAAAGCT+TGG + Chr7:92707031-92707050 MsG0780041583.01.T01:CDS 60.0%
GACCACGCCGTCTCAGAACT+TGG + Chr7:92709748-92709767 MsG0780041583.01.T01:CDS 60.0%
TAGCCAAGGCCTCGGCATTC+TGG - Chr7:92707026-92707045 None:intergenic 60.0%
TGCTGTCAGCCAGAATGCCG+AGG + Chr7:92707014-92707033 MsG0780041583.01.T01:CDS 60.0%
!! TCCCAAGTTCTGAGACGGCG+TGG - Chr7:92709753-92709772 None:intergenic 60.0%
CAGCCAGAATGCCGAGGCCT+TGG + Chr7:92707020-92707039 MsG0780041583.01.T01:CDS 65.0%
GACGAAGGTGGGGTTGCAGC+TGG + Chr7:92709961-92709980 MsG0780041583.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 92705321 92710206 92705321 ID=MsG0780041583.01;Name=MsG0780041583.01
Chr7 mRNA 92705321 92710206 92705321 ID=MsG0780041583.01.T01;Parent=MsG0780041583.01;Name=MsG0780041583.01.T01;_AED=0.35;_eAED=0.35;_QI=15|0.81|0.75|1|1|1|12|189|576
Chr7 exon 92705321 92705689 92705321 ID=MsG0780041583.01.T01:exon:20213;Parent=MsG0780041583.01.T01
Chr7 exon 92706026 92706195 92706026 ID=MsG0780041583.01.T01:exon:20214;Parent=MsG0780041583.01.T01
Chr7 exon 92706378 92706453 92706378 ID=MsG0780041583.01.T01:exon:20215;Parent=MsG0780041583.01.T01
Chr7 exon 92706618 92706748 92706618 ID=MsG0780041583.01.T01:exon:20216;Parent=MsG0780041583.01.T01
Chr7 exon 92706951 92707073 92706951 ID=MsG0780041583.01.T01:exon:20217;Parent=MsG0780041583.01.T01
Chr7 exon 92707163 92707260 92707163 ID=MsG0780041583.01.T01:exon:20218;Parent=MsG0780041583.01.T01
Chr7 exon 92707392 92707497 92707392 ID=MsG0780041583.01.T01:exon:20219;Parent=MsG0780041583.01.T01
Chr7 exon 92707572 92707665 92707572 ID=MsG0780041583.01.T01:exon:20220;Parent=MsG0780041583.01.T01
Chr7 exon 92708274 92708395 92708274 ID=MsG0780041583.01.T01:exon:20221;Parent=MsG0780041583.01.T01
Chr7 exon 92709371 92709510 92709371 ID=MsG0780041583.01.T01:exon:20222;Parent=MsG0780041583.01.T01
Chr7 exon 92709599 92709791 92709599 ID=MsG0780041583.01.T01:exon:20223;Parent=MsG0780041583.01.T01
Chr7 exon 92709894 92710206 92709894 ID=MsG0780041583.01.T01:exon:20224;Parent=MsG0780041583.01.T01
Chr7 five_prime_UTR 92705321 92705335 92705321 ID=MsG0780041583.01.T01:five_prime_utr;Parent=MsG0780041583.01.T01
Chr7 CDS 92705336 92705689 92705336 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92706026 92706195 92706026 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92706378 92706453 92706378 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92706618 92706748 92706618 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92706951 92707073 92706951 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92707163 92707260 92707163 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92707392 92707497 92707392 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92707572 92707665 92707572 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92708274 92708395 92708274 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92709371 92709510 92709371 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92709599 92709791 92709599 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 CDS 92709894 92710017 92709894 ID=MsG0780041583.01.T01:cds;Parent=MsG0780041583.01.T01
Chr7 three_prime_UTR 92710018 92710206 92710018 ID=MsG0780041583.01.T01:three_prime_utr;Parent=MsG0780041583.01.T01
Gene Sequence

>MsG0780041583.01.T01

ATGGCTGCTGCTGCTTCTGCTTTTGGTAGTATTAGATTCTACCAGACAATAATACCTTTGTCCAAATACATTCCTCCTTCTCCTCCTCACAAAAACAACAACCTTCTCTCTTTACCTTGTATAAATTTCTCGACGACGAAACCTCTAATGTCTCATCATCATCAGCATCTCACTATGACACCTGCCATCACCATTTATGGCGATGAACAAAACATCATTAAACCTTCTCCTCCTCCTCCTCTATTCGCTGATGATTATCACAGTATTGATCAACAACTTCTCGGTAACATAGCTTATGATGCTCTTGTTTGGGCCTCTCTTCACGGTCTCCTCATGGGAGATAAATCTTACCAGAAATCAGGAATGGTTCCTGGTGTGGGATTGATGCATGCCCCGTTTGCATTATTCCCAACGTCATTTCCAGAAAGTAAATGGAAGCAAGCTTCTGATTTGGCACCTATATTCAATGAACTTGTTGACCGTGTTAGTTTAGATGGTGAATTTCTTCAAGAATCTCTCTCAAGAACTAAGCAAGTGGACGAATTTACCTCTAGACTTTTAGATATTCATTCCAAGATGCTACAGCTCAACAAAAAAGAGGAAATAAGATTGGGATTACATCGTTCAGATTATATGCTTGATGAACAAACCAAATCCCTTTTGCAAATAGAGCTCAACACTATTTCATCTTCATTTGCTGGTTTTAGTACTCTTGTCACTCAACTTCATAGGTACATACTTTCTTGCCATGGAAAATTGCTTGGTCTGGATTCAGAAAAGGTTCCTGCCAATAATGCTGTCAGCCAGAATGCCGAGGCCTTGGCTAAAGCTTGGAGTGAGTATAATAACCCCAGGGCTATCATTATGATTGTGGTTCAGGCTGAAGAGCGAAACATGTATGACCAGCATTTTCTTTCTGCTGTTCTAAGAGACAAATATCCTTATCACCGTAAGCTGTTGTCCTTAGCTTTGAACACGCATGGTATTACAATTGTTCGCAAAACGATGGCAGAAGTTGACCAAGAAGGAGAAATTCTACAAGATGGAACACTTTCTGTAGAAATTCAATTTTTTTACTGTAGTAATGGACAAGCAGTTGCAGTCATTTACTTCAGGGCTGGCTATACACCAGTTGATTATCCTTCAGAATCAGAATGGAGAGCTAGGCTACTGATGGAACAATCTTCTGCTGTCAAATGCCCTTCAATATCGTATCATTTGGTTGGCACCAAGAAGATTCAACAGGAACTTGCAAAGCCAGGTGTTCTTGAGAGGTTCCTTGAAAACAAAGACGATATCGCAAAAATGCGTGAATGCTTTGCAGGACTGTGGAGTTTGGATGACTCGGATATTGTTAGAAAAGCAATTGAACGACCTGAATTATTTGTAATGAAGCCCCAGAGAGAAGGAGGAGGAAACAATATTTATGGTGAAGCAGTGCGGGACACCCTCATAAAATTGCAGAAAACGGGTTCTCAAGAAGACGCAGCTTACATACTTATGCAGAGGATATTTCCAAATACTTCTGCTGCAGTTTTGATGCGTAATGGTTGTTGGCACAAGGACCACGCCGTCTCAGAACTTGGGATATTTGGTACTTATTTAAGGAATAAGGATAGGGTTGTCGTGAATAATCAAAGTGGCTATTTGATGCGTACAAAAATATCATCATCTGACGAAGGTGGGGTTGCAGCTGGTTTTGCAGTAATAGATAGTGTATACCTCACTTGA
Protein sequence

>MsG0780041583.01.T01

MAAAASAFGSIRFYQTIIPLSKYIPPSPPHKNNNLLSLPCINFSTTKPLMSHHHQHLTMTPAITIYGDEQNIIKPSPPPPLFADDYHSIDQQLLGNIAYDALVWASLHGLLMGDKSYQKSGMVPGVGLMHAPFALFPTSFPESKWKQASDLAPIFNELVDRVSLDGEFLQESLSRTKQVDEFTSRLLDIHSKMLQLNKKEEIRLGLHRSDYMLDEQTKSLLQIELNTISSSFAGFSTLVTQLHRYILSCHGKLLGLDSEKVPANNAVSQNAEALAKAWSEYNNPRAIIMIVVQAEERNMYDQHFLSAVLRDKYPYHRKLLSLALNTHGITIVRKTMAEVDQEGEILQDGTLSVEIQFFYCSNGQAVAVIYFRAGYTPVDYPSESEWRARLLMEQSSAVKCPSISYHLVGTKKIQQELAKPGVLERFLENKDDIAKMRECFAGLWSLDDSDIVRKAIERPELFVMKPQREGGGNNIYGEAVRDTLIKLQKTGSQEDAAYILMQRIFPNTSAAVLMRNGCWHKDHAVSELGIFGTYLRNKDRVVVNNQSGYLMRTKISSSDEGGVAAGFAVIDSVYLT*