Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015009.01.T01 | XP_013460469.1 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.16E-151 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015009.01.T01 | P25317 | 66.667 | 219 | 73 | 0 | 5 | 223 | 1 | 219 | 1.37E-109 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015009.01.T01 | I3SI44 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 5.53e-152 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0380015009.01 | 0.833005 | 6.836157e-56 | 7.771727e-53 |
| MsG0080048036.01 | MsG0380015009.01 | 0.817170 | 3.788031e-52 | 2.738513e-49 |
| MsG0080048202.01 | MsG0380015009.01 | 0.803315 | 3.696021e-49 | 1.851419e-46 |
| MsG0080048347.01 | MsG0380015009.01 | 0.824149 | 9.439840e-54 | 8.292913e-51 |
| MsG0080048352.01 | MsG0380015009.01 | 0.823555 | 1.300834e-53 | 1.123720e-50 |
| MsG0080048904.01 | MsG0380015009.01 | 0.833421 | 5.383790e-56 | 6.197275e-53 |
| MsG0080049066.01 | MsG0380015009.01 | -0.800581 | 1.347590e-48 | 6.297650e-46 |
| MsG0080049133.01 | MsG0380015009.01 | -0.823749 | 1.171401e-53 | 1.017655e-50 |
| MsG0180000322.01 | MsG0380015009.01 | -0.821156 | 4.688967e-53 | 3.785071e-50 |
| MsG0180000337.01 | MsG0380015009.01 | 0.834263 | 3.315283e-56 | 3.913929e-53 |
| MsG0180001116.01 | MsG0380015009.01 | -0.824035 | 1.003946e-53 | 8.790573e-51 |
| MsG0180002099.01 | MsG0380015009.01 | -0.816048 | 6.758587e-52 | 4.738486e-49 |
| MsG0180002425.01 | MsG0380015009.01 | -0.806613 | 7.555957e-50 | 4.119367e-47 |
| MsG0180003757.01 | MsG0380015009.01 | -0.825140 | 5.514119e-54 | 4.984012e-51 |
| MsG0180004154.01 | MsG0380015009.01 | 0.878635 | 2.394008e-69 | 1.259500e-65 |
| MsG0180004266.01 | MsG0380015009.01 | 0.895460 | 9.382072e-76 | 9.747219e-72 |
| MsG0180004453.01 | MsG0380015009.01 | 0.814898 | 1.218541e-51 | 8.277993e-49 |
| MsG0180004502.01 | MsG0380015009.01 | -0.806512 | 7.936611e-50 | 4.315893e-47 |
| MsG0180004581.01 | MsG0380015009.01 | -0.808150 | 3.566776e-50 | 2.024110e-47 |
| MsG0180004773.01 | MsG0380015009.01 | -0.860013 | 2.775812e-63 | 7.478296e-60 |
| MsG0180004777.01 | MsG0380015009.01 | 0.839626 | 1.416100e-57 | 1.966856e-54 |
| MsG0180004941.01 | MsG0380015009.01 | 0.862870 | 3.731470e-64 | 1.109474e-60 |
| MsG0180005328.01 | MsG0380015009.01 | 0.827889 | 1.219351e-54 | 1.192709e-51 |
| MsG0180005356.01 | MsG0380015009.01 | 0.811924 | 5.487882e-51 | 3.440913e-48 |
| MsG0180005357.01 | MsG0380015009.01 | 0.800164 | 1.638699e-48 | 7.576983e-46 |
| MsG0180005358.01 | MsG0380015009.01 | 0.824115 | 9.613048e-54 | 8.436617e-51 |
| MsG0180005474.01 | MsG0380015009.01 | -0.800831 | 1.198075e-48 | 5.634558e-46 |
| MsG0180005542.01 | MsG0380015009.01 | 0.873860 | 1.059302e-67 | 4.667279e-64 |
| MsG0180005648.01 | MsG0380015009.01 | 0.813737 | 2.200257e-51 | 1.448582e-48 |
| MsG0180005865.01 | MsG0380015009.01 | 0.802702 | 4.948863e-49 | 2.440603e-46 |
| MsG0180006212.01 | MsG0380015009.01 | -0.806519 | 7.909845e-50 | 4.302138e-47 |
| MsG0180006227.01 | MsG0380015009.01 | -0.839288 | 1.732953e-57 | 2.382044e-54 |
| MsG0280010802.01 | MsG0380015009.01 | 0.817867 | 2.639140e-52 | 1.944665e-49 |
| MsG0280011165.01 | MsG0380015009.01 | 0.889968 | 1.505508e-73 | 1.241748e-69 |
| MsG0280011193.01 | MsG0380015009.01 | 0.883702 | 3.588912e-71 | 2.300283e-67 |
| MsG0280011203.01 | MsG0380015009.01 | 0.884877 | 1.317252e-71 | 8.840733e-68 |
| MsG0280011264.01 | MsG0380015009.01 | 0.812196 | 4.787141e-51 | 3.024085e-48 |
| MsG0380013114.01 | MsG0380015009.01 | -0.826411 | 2.754003e-54 | 2.580890e-51 |
| MsG0380013300.01 | MsG0380015009.01 | 0.829676 | 4.505359e-55 | 4.643571e-52 |
| MsG0380014934.01 | MsG0380015009.01 | 0.819219 | 1.302799e-52 | 9.964287e-50 |
| MsG0380015008.01 | MsG0380015009.01 | 0.902686 | 7.520423e-79 | 1.077673e-74 |
| MsG0380015009.01 | MsG0380015010.01 | 0.937446 | 3.418907e-98 | 3.101918e-93 |
| MsG0380015009.01 | MsG0380015070.01 | 0.803027 | 4.240192e-49 | 2.108371e-46 |
| MsG0380015009.01 | MsG0380015121.01 | -0.808920 | 2.442819e-50 | 1.414496e-47 |
| MsG0380015009.01 | MsG0380015200.01 | -0.816508 | 5.334693e-52 | 3.787138e-49 |
| MsG0380015009.01 | MsG0380015201.01 | -0.831116 | 2.002647e-55 | 2.152484e-52 |
| MsG0380015009.01 | MsG0380015369.01 | 0.834337 | 3.176508e-56 | 3.758469e-53 |
| MsG0380015009.01 | MsG0380015629.01 | 0.813539 | 2.431831e-51 | 1.592509e-48 |
| MsG0380015009.01 | MsG0380016800.01 | 0.800694 | 1.278227e-48 | 5.990387e-46 |
| MsG0380015009.01 | MsG0380016801.01 | 0.869423 | 3.131099e-66 | 1.174637e-62 |
| MsG0380015009.01 | MsG0380016839.01 | 0.800608 | 1.330501e-48 | 6.221987e-46 |
| MsG0380015009.01 | MsG0380016896.01 | -0.806268 | 8.934540e-50 | 4.828613e-47 |
| MsG0380015009.01 | MsG0380017173.01 | 0.807088 | 5.996801e-50 | 3.309728e-47 |
| MsG0380015009.01 | MsG0380017247.01 | 0.801877 | 7.318101e-49 | 3.534094e-46 |
| MsG0380015009.01 | MsG0380017405.01 | -0.813894 | 2.030983e-51 | 1.342852e-48 |
| MsG0380015009.01 | MsG0380017610.01 | 0.825176 | 5.405179e-54 | 4.890558e-51 |
| MsG0380015009.01 | MsG0380017690.01 | 0.805695 | 1.178897e-49 | 6.278759e-47 |
| MsG0380015009.01 | MsG0380017928.01 | -0.815051 | 1.126717e-51 | 7.686125e-49 |
| MsG0380015009.01 | MsG0380018051.01 | 0.805071 | 1.593000e-49 | 8.349031e-47 |
| MsG0380015009.01 | MsG0480018201.01 | -0.822882 | 1.867141e-53 | 1.582650e-50 |
| MsG0380015009.01 | MsG0480018202.01 | -0.810576 | 1.076172e-50 | 6.510914e-48 |
| MsG0380015009.01 | MsG0480018203.01 | -0.815020 | 1.145065e-51 | 7.804862e-49 |
| MsG0380015009.01 | MsG0480018628.01 | -0.831355 | 1.749771e-55 | 1.894121e-52 |
| MsG0380015009.01 | MsG0480019217.01 | 0.831245 | 1.861621e-55 | 2.008467e-52 |
| MsG0380015009.01 | MsG0480019228.01 | 0.826671 | 2.386393e-54 | 2.252962e-51 |
| MsG0380015009.01 | MsG0480019295.01 | 0.820422 | 6.915775e-53 | 5.469940e-50 |
| MsG0380015009.01 | MsG0480020497.01 | 0.828888 | 6.998172e-55 | 7.046885e-52 |
| MsG0380015009.01 | MsG0480020784.01 | 0.853250 | 2.706196e-61 | 5.810581e-58 |
| MsG0380015009.01 | MsG0480021117.01 | 0.804748 | 1.861457e-49 | 9.675554e-47 |
| MsG0380015009.01 | MsG0480021327.01 | -0.814042 | 1.884625e-51 | 1.251064e-48 |
| MsG0380015009.01 | MsG0480021331.01 | -0.806466 | 8.116519e-50 | 4.408619e-47 |
| MsG0380015009.01 | MsG0480022125.01 | 0.816797 | 4.595948e-52 | 3.288613e-49 |
| MsG0380015009.01 | MsG0480022311.01 | 0.814366 | 1.597830e-51 | 1.070062e-48 |
| MsG0380015009.01 | MsG0480022319.01 | 0.803363 | 3.612261e-49 | 1.811659e-46 |
| MsG0380015009.01 | MsG0480022655.01 | 0.870389 | 1.513997e-66 | 5.878678e-63 |
| MsG0380015009.01 | MsG0480022690.01 | -0.805376 | 1.375658e-49 | 7.266332e-47 |
| MsG0380015009.01 | MsG0480022935.01 | -0.811460 | 6.924834e-51 | 4.289055e-48 |
| MsG0380015009.01 | MsG0480023107.01 | 0.839290 | 1.731221e-57 | 2.379852e-54 |
| MsG0380015009.01 | MsG0480023152.01 | -0.805916 | 1.059706e-49 | 5.675717e-47 |
| MsG0380015009.01 | MsG0480023187.01 | -0.801176 | 1.018748e-48 | 4.833195e-46 |
| MsG0380015009.01 | MsG0480023267.01 | 0.825936 | 3.570982e-54 | 3.301643e-51 |
| MsG0380015009.01 | MsG0480023303.01 | 0.832461 | 9.330760e-56 | 1.043625e-52 |
| MsG0380015009.01 | MsG0480023606.01 | 0.815729 | 7.963059e-52 | 5.534541e-49 |
| MsG0380015009.01 | MsG0480023695.01 | -0.817992 | 2.472599e-52 | 1.828274e-49 |
| MsG0380015009.01 | MsG0480023819.01 | 0.829100 | 6.218238e-55 | 6.301142e-52 |
| MsG0380015009.01 | MsG0480023921.01 | 0.835970 | 1.230234e-56 | 1.528596e-53 |
| MsG0380015009.01 | MsG0580024220.01 | 0.800546 | 1.369752e-48 | 6.395409e-46 |
| MsG0380015009.01 | MsG0580024408.01 | 0.846350 | 2.294756e-59 | 3.938626e-56 |
| MsG0380015009.01 | MsG0580024778.01 | 0.816449 | 5.500020e-52 | 3.898071e-49 |
| MsG0380015009.01 | MsG0580025683.01 | 0.807497 | 4.909916e-50 | 2.739059e-47 |
| MsG0380015009.01 | MsG0580026095.01 | 0.832880 | 7.341857e-56 | 8.315016e-53 |
| MsG0380015009.01 | MsG0580027646.01 | 0.803815 | 2.911768e-49 | 1.477497e-46 |
| MsG0380015009.01 | MsG0580028999.01 | 0.833072 | 6.577655e-56 | 7.493173e-53 |
| MsG0380015009.01 | MsG0580030133.01 | 0.860390 | 2.135270e-63 | 5.827487e-60 |
| MsG0380015009.01 | MsG0580030135.01 | 0.851730 | 7.334887e-61 | 1.498671e-57 |
| MsG0380015009.01 | MsG0580030145.01 | 0.807842 | 4.148558e-50 | 2.335056e-47 |
| MsG0380015009.01 | MsG0580030197.01 | -0.804853 | 1.769224e-49 | 9.221100e-47 |
| MsG0380015009.01 | MsG0580030237.01 | -0.807464 | 4.990741e-50 | 2.781723e-47 |
| MsG0380015009.01 | MsG0680030336.01 | 0.824400 | 8.240644e-54 | 7.290812e-51 |
| MsG0380015009.01 | MsG0680030719.01 | 0.817998 | 2.465290e-52 | 1.823133e-49 |
| MsG0380015009.01 | MsG0680031240.01 | 0.858832 | 6.281950e-63 | 1.624906e-59 |
| MsG0380015009.01 | MsG0680031429.01 | 0.815652 | 8.282355e-52 | 5.744304e-49 |
| MsG0380015009.01 | MsG0680031813.01 | -0.806859 | 6.704098e-50 | 3.678421e-47 |
| MsG0380015009.01 | MsG0680034229.01 | -0.812899 | 3.361359e-51 | 2.163296e-48 |
| MsG0380015009.01 | MsG0680034255.01 | 0.816150 | 6.414491e-52 | 4.509652e-49 |
| MsG0380015009.01 | MsG0680034316.01 | 0.847232 | 1.317224e-59 | 2.325833e-56 |
| MsG0380015009.01 | MsG0680034317.01 | 0.851455 | 8.776410e-61 | 1.777362e-57 |
| MsG0380015009.01 | MsG0680035779.01 | 0.800666 | 1.294948e-48 | 6.064726e-46 |
| MsG0380015009.01 | MsG0680035841.01 | 0.805721 | 1.164527e-49 | 6.206257e-47 |
| MsG0380015009.01 | MsG0780035993.01 | 0.800156 | 1.644625e-48 | 7.602964e-46 |
| MsG0380015009.01 | MsG0780036661.01 | 0.896712 | 2.835204e-76 | 3.103633e-72 |
| MsG0380015009.01 | MsG0780038030.01 | -0.807734 | 4.374246e-50 | 2.455236e-47 |
| MsG0380015009.01 | MsG0780038047.01 | -0.802022 | 6.832967e-49 | 3.311785e-46 |
| MsG0380015009.01 | MsG0780038263.01 | -0.828052 | 1.114049e-54 | 1.094959e-51 |
| MsG0380015009.01 | MsG0780038860.01 | 0.804539 | 2.058225e-49 | 1.063957e-46 |
| MsG0380015009.01 | MsG0780038922.01 | 0.800352 | 1.500649e-48 | 6.972305e-46 |
| MsG0380015009.01 | MsG0780038923.01 | 0.820946 | 5.242793e-53 | 4.207620e-50 |
| MsG0380015009.01 | MsG0780038939.01 | 0.823094 | 1.666361e-53 | 1.421005e-50 |
| MsG0380015009.01 | MsG0780039480.01 | 0.811055 | 8.478652e-51 | 5.195737e-48 |
| MsG0380015009.01 | MsG0780039576.01 | 0.809021 | 2.324140e-50 | 1.349413e-47 |
| MsG0380015009.01 | MsG0780039783.01 | 0.834323 | 3.203108e-56 | 3.788472e-53 |
| MsG0380015009.01 | MsG0780039822.01 | 0.803999 | 2.666419e-49 | 1.359445e-46 |
| MsG0380015009.01 | MsG0780039836.01 | -0.800027 | 1.747251e-48 | 8.051155e-46 |
| MsG0380015009.01 | MsG0780039838.01 | -0.814604 | 1.415429e-51 | 9.540218e-49 |
| MsG0380015009.01 | MsG0780039839.01 | -0.836127 | 1.122432e-56 | 1.401401e-53 |
| MsG0380015009.01 | MsG0780039969.01 | 0.824130 | 9.535633e-54 | 8.372448e-51 |
| MsG0380015009.01 | MsG0780039978.01 | 0.857212 | 1.903974e-62 | 4.663621e-59 |
| MsG0380015009.01 | MsG0780040321.01 | -0.821791 | 3.345880e-53 | 2.749322e-50 |
| MsG0380015009.01 | MsG0780040805.01 | 0.801965 | 7.017805e-49 | 3.396360e-46 |
| MsG0380015009.01 | MsG0780040806.01 | 0.814186 | 1.751273e-51 | 1.167092e-48 |
| MsG0380015009.01 | MsG0780041254.01 | -0.812152 | 4.894115e-51 | 3.087955e-48 |
| MsG0380015009.01 | MsG0780041316.01 | 0.800735 | 1.253665e-48 | 5.881499e-46 |
| MsG0380015009.01 | MsG0780041501.01 | 0.804891 | 1.737227e-49 | 9.063699e-47 |
| MsG0380015009.01 | MsG0780041556.01 | 0.841077 | 5.914217e-58 | 8.591476e-55 |
| MsG0380015009.01 | MsG0780041561.01 | -0.800015 | 1.756825e-48 | 8.092832e-46 |
| MsG0380015009.01 | MsG0780041583.01 | 0.831612 | 1.512810e-55 | 1.650223e-52 |
| MsG0380015009.01 | MsG0780041620.01 | -0.830547 | 2.761958e-55 | 2.919081e-52 |
| MsG0380015009.01 | MsG0780041783.01 | -0.810355 | 1.201160e-50 | 7.224512e-48 |
| MsG0380015009.01 | MsG0880041835.01 | -0.803543 | 3.315671e-49 | 1.670779e-46 |
| MsG0380015009.01 | MsG0880041855.01 | -0.806488 | 8.027299e-50 | 4.362609e-47 |
| MsG0380015009.01 | MsG0880042740.01 | 0.824076 | 9.817384e-54 | 8.606647e-51 |
| MsG0380015009.01 | MsG0880042858.01 | -0.824606 | 7.370616e-54 | 6.561155e-51 |
| MsG0380015009.01 | MsG0880043364.01 | 0.800082 | 1.702580e-48 | 7.856432e-46 |
| MsG0380015009.01 | MsG0880043744.01 | 0.866072 | 3.724124e-65 | 1.238976e-61 |
| MsG0380015009.01 | MsG0880043828.01 | 0.852187 | 5.440629e-61 | 1.127880e-57 |
| MsG0380015009.01 | MsG0880044339.01 | -0.805135 | 1.545093e-49 | 8.111082e-47 |
| MsG0380015009.01 | MsG0880045441.01 | 0.825519 | 4.485561e-54 | 4.097846e-51 |
| MsG0380015009.01 | MsG0880045458.01 | 0.827979 | 1.159895e-54 | 1.137643e-51 |
| MsG0380015009.01 | MsG0880045677.01 | 0.812695 | 3.725684e-51 | 2.384962e-48 |
| MsG0380015009.01 | MsG0880045818.01 | 0.852626 | 4.080777e-61 | 8.578306e-58 |
| MsG0380015009.01 | MsG0880046429.01 | 0.822508 | 2.281676e-53 | 1.913632e-50 |
| MsG0380015009.01 | MsG0880046469.01 | -0.816306 | 5.920421e-52 | 4.180210e-49 |
| MsG0380015009.01 | MsG0880046996.01 | 0.833167 | 6.228957e-56 | 7.115878e-53 |
| MsG0380015009.01 | MsG0880047211.01 | 0.831847 | 1.323426e-55 | 1.453854e-52 |
| MsG0380015009.01 | MsG0880047627.01 | -0.811017 | 8.640629e-51 | 5.289990e-48 |
| MsG0380015009.01 | MsG0880047665.01 | 0.835211 | 1.915050e-56 | 2.326087e-53 |
| MsG0380015009.01 | MsG0880047747.01 | 0.818860 | 1.572601e-52 | 1.191000e-49 |
| MsG0280006883.01 | MsG0380015009.01 | 0.823940 | 1.056667e-53 | 9.228599e-51 |
| MsG0280007216.01 | MsG0380015009.01 | 0.843382 | 1.450025e-58 | 2.264960e-55 |
| MsG0280007649.01 | MsG0380015009.01 | -0.811587 | 6.498260e-51 | 4.038183e-48 |
| MsG0280007650.01 | MsG0380015009.01 | -0.813624 | 2.328935e-51 | 1.528641e-48 |
| MsG0280007902.01 | MsG0380015009.01 | -0.800642 | 1.309421e-48 | 6.128732e-46 |
| MsG0280007912.01 | MsG0380015009.01 | 0.801820 | 7.516920e-49 | 3.624701e-46 |
| MsG0280007914.01 | MsG0380015009.01 | 0.841347 | 5.022373e-58 | 7.358285e-55 |
| MsG0280008405.01 | MsG0380015009.01 | 0.888849 | 4.097931e-73 | 3.227842e-69 |
| MsG0280009094.01 | MsG0380015009.01 | -0.809216 | 2.111389e-50 | 1.232381e-47 |
| MsG0280009167.01 | MsG0380015009.01 | 0.808938 | 2.421900e-50 | 1.403009e-47 |
| MsG0280010019.01 | MsG0380015009.01 | 0.805665 | 1.196077e-49 | 6.364967e-47 |
| MsG0280010047.01 | MsG0380015009.01 | 0.829315 | 5.512827e-55 | 5.623139e-52 |
| MsG0280010053.01 | MsG0380015009.01 | 0.803512 | 3.365674e-49 | 1.694601e-46 |
| MsG0280010055.01 | MsG0380015009.01 | 0.822669 | 2.093261e-53 | 1.763662e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015009.01.T01 | MTR_3g467430 | 92.857 | 224 | 16 | 0 | 1 | 224 | 1 | 224 | 1.40e-155 | 430 |
| MsG0380015009.01.T01 | MTR_3g467420 | 86.161 | 224 | 31 | 0 | 1 | 224 | 1 | 224 | 4.62e-144 | 401 |
| MsG0380015009.01.T01 | MTR_2g070180 | 60.849 | 212 | 83 | 0 | 8 | 219 | 3 | 214 | 1.36e-96 | 281 |
| MsG0380015009.01.T01 | MTR_2g070150 | 64.356 | 202 | 72 | 0 | 8 | 209 | 3 | 204 | 1.56e-96 | 280 |
| MsG0380015009.01.T01 | MTR_2g070130 | 59.447 | 217 | 88 | 0 | 8 | 224 | 3 | 219 | 2.12e-95 | 278 |
| MsG0380015009.01.T01 | MTR_2g070140 | 62.069 | 203 | 77 | 0 | 22 | 224 | 1 | 203 | 3.16e-95 | 277 |
| MsG0380015009.01.T01 | MTR_2g070060 | 58.065 | 217 | 91 | 0 | 8 | 224 | 3 | 219 | 5.47e-94 | 274 |
| MsG0380015009.01.T01 | MTR_2g070210 | 58.904 | 219 | 88 | 1 | 8 | 224 | 3 | 221 | 3.01e-91 | 267 |
| MsG0380015009.01.T01 | MTR_2g070070 | 60.369 | 217 | 86 | 0 | 8 | 224 | 3 | 219 | 3.18e-91 | 267 |
| MsG0380015009.01.T01 | MTR_2g070200 | 60.092 | 218 | 85 | 2 | 8 | 223 | 3 | 220 | 6.33e-89 | 261 |
| MsG0380015009.01.T01 | MTR_4g124130 | 56.621 | 219 | 94 | 1 | 7 | 224 | 2 | 220 | 7.06e-89 | 261 |
| MsG0380015009.01.T01 | MTR_2g070110 | 58.525 | 217 | 89 | 1 | 8 | 224 | 3 | 218 | 1.39e-88 | 260 |
| MsG0380015009.01.T01 | MTR_2g070120 | 56.221 | 217 | 95 | 0 | 8 | 224 | 3 | 219 | 1.02e-87 | 258 |
| MsG0380015009.01.T01 | MTR_8g056940 | 53.917 | 217 | 100 | 0 | 8 | 224 | 3 | 219 | 8.28e-87 | 256 |
| MsG0380015009.01.T01 | MTR_5g076900 | 49.083 | 218 | 109 | 2 | 8 | 224 | 5 | 221 | 3.50e-72 | 219 |
| MsG0380015009.01.T01 | MTR_0186s0030 | 55.396 | 139 | 62 | 0 | 8 | 146 | 3 | 141 | 2.12e-52 | 166 |
| MsG0380015009.01.T01 | MTR_5g037380 | 41.818 | 220 | 119 | 4 | 5 | 215 | 1 | 220 | 7.10e-48 | 157 |
| MsG0380015009.01.T01 | MTR_7g065720 | 41.038 | 212 | 119 | 5 | 6 | 213 | 4 | 213 | 1.42e-46 | 154 |
| MsG0380015009.01.T01 | MTR_7g065270 | 42.308 | 208 | 114 | 6 | 6 | 210 | 4 | 208 | 1.09e-45 | 151 |
| MsG0380015009.01.T01 | MTR_8g061950 | 39.474 | 228 | 121 | 5 | 5 | 218 | 1 | 225 | 3.67e-45 | 150 |
| MsG0380015009.01.T01 | MTR_8g087425 | 38.739 | 222 | 132 | 3 | 5 | 223 | 1 | 221 | 9.42e-44 | 147 |
| MsG0380015009.01.T01 | MTR_3g099757 | 46.746 | 169 | 89 | 1 | 5 | 173 | 1 | 168 | 1.38e-43 | 146 |
| MsG0380015009.01.T01 | MTR_4g019780 | 40.000 | 215 | 116 | 7 | 6 | 213 | 5 | 213 | 1.54e-43 | 146 |
| MsG0380015009.01.T01 | MTR_7g065660 | 38.889 | 216 | 125 | 5 | 1 | 213 | 1 | 212 | 2.11e-43 | 145 |
| MsG0380015009.01.T01 | MTR_7g065290 | 39.732 | 224 | 128 | 6 | 1 | 221 | 1 | 220 | 2.99e-43 | 145 |
| MsG0380015009.01.T01 | MTR_7g065740 | 39.151 | 212 | 123 | 4 | 6 | 213 | 4 | 213 | 3.30e-43 | 145 |
| MsG0380015009.01.T01 | MTR_1g090060 | 39.904 | 208 | 120 | 3 | 10 | 213 | 4 | 210 | 3.73e-43 | 145 |
| MsG0380015009.01.T01 | MTR_7g065265 | 42.130 | 216 | 118 | 6 | 1 | 213 | 1 | 212 | 4.27e-43 | 145 |
| MsG0380015009.01.T01 | MTR_7g065590 | 38.356 | 219 | 116 | 6 | 5 | 213 | 3 | 212 | 7.13e-42 | 142 |
| MsG0380015009.01.T01 | MTR_5g040430 | 37.321 | 209 | 119 | 4 | 10 | 209 | 8 | 213 | 8.34e-42 | 142 |
| MsG0380015009.01.T01 | MTR_1g090150 | 41.315 | 213 | 106 | 8 | 8 | 210 | 2 | 205 | 1.38e-41 | 141 |
| MsG0380015009.01.T01 | MTR_4g019790 | 37.850 | 214 | 126 | 5 | 5 | 213 | 1 | 212 | 1.81e-41 | 140 |
| MsG0380015009.01.T01 | MTR_7g065750 | 38.767 | 227 | 126 | 7 | 1 | 220 | 1 | 221 | 1.97e-41 | 140 |
| MsG0380015009.01.T01 | MTR_4g059730 | 40.476 | 210 | 120 | 3 | 8 | 213 | 3 | 211 | 3.04e-41 | 140 |
| MsG0380015009.01.T01 | MTR_1g090100 | 40.000 | 210 | 121 | 3 | 9 | 214 | 2 | 210 | 3.10e-41 | 140 |
| MsG0380015009.01.T01 | MTR_7g065230 | 41.315 | 213 | 114 | 7 | 1 | 211 | 1 | 204 | 5.25e-41 | 139 |
| MsG0380015009.01.T01 | MTR_7g065630 | 36.493 | 211 | 125 | 5 | 6 | 213 | 22 | 226 | 1.87e-39 | 136 |
| MsG0380015009.01.T01 | MTR_1g090090 | 39.423 | 208 | 121 | 4 | 10 | 213 | 4 | 210 | 3.95e-39 | 135 |
| MsG0380015009.01.T01 | MTR_7g065600 | 38.462 | 208 | 121 | 5 | 1 | 205 | 1 | 204 | 1.37e-38 | 133 |
| MsG0380015009.01.T01 | MTR_7g065260 | 40.708 | 226 | 126 | 7 | 1 | 223 | 8 | 228 | 1.52e-38 | 133 |
| MsG0380015009.01.T01 | MTR_1g090070 | 36.199 | 221 | 131 | 5 | 1 | 214 | 1 | 218 | 2.02e-38 | 133 |
| MsG0380015009.01.T01 | MTR_6g080440 | 38.164 | 207 | 114 | 6 | 23 | 220 | 17 | 218 | 4.03e-38 | 132 |
| MsG0380015009.01.T01 | MTR_8g087410 | 39.901 | 203 | 119 | 2 | 5 | 205 | 2 | 203 | 8.36e-38 | 131 |
| MsG0380015009.01.T01 | MTR_7g065710 | 36.585 | 205 | 125 | 4 | 10 | 213 | 5 | 205 | 1.79e-37 | 130 |
| MsG0380015009.01.T01 | MTR_1g115195 | 38.806 | 201 | 117 | 5 | 10 | 205 | 4 | 203 | 1.50e-35 | 125 |
| MsG0380015009.01.T01 | MTR_7g065680 | 36.842 | 209 | 123 | 5 | 8 | 213 | 6 | 208 | 5.53e-35 | 124 |
| MsG0380015009.01.T01 | MTR_7g065640 | 35.349 | 215 | 116 | 6 | 1 | 213 | 1 | 194 | 1.55e-34 | 122 |
| MsG0380015009.01.T01 | MTR_7g065700 | 37.799 | 209 | 125 | 5 | 6 | 213 | 4 | 208 | 1.58e-34 | 123 |
| MsG0380015009.01.T01 | MTR_2g072120 | 60.294 | 68 | 27 | 0 | 52 | 119 | 1 | 68 | 5.03e-25 | 94.0 |
| MsG0380015009.01.T01 | MTR_7g100320 | 29.231 | 195 | 127 | 6 | 20 | 210 | 37 | 224 | 5.90e-15 | 71.6 |
| MsG0380015009.01.T01 | MTR_4g043640 | 57.143 | 42 | 18 | 0 | 153 | 194 | 44 | 85 | 1.82e-12 | 61.6 |
| MsG0380015009.01.T01 | MTR_1g067180 | 30.857 | 175 | 110 | 7 | 20 | 190 | 38 | 205 | 3.40e-12 | 63.9 |
| MsG0380015009.01.T01 | MTR_5g037390 | 45.205 | 73 | 38 | 1 | 33 | 103 | 11 | 83 | 1.81e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015009.01.T01 | AT1G78370 | 60.664 | 211 | 83 | 0 | 11 | 221 | 6 | 216 | 2.41e-99 | 288 |
| MsG0380015009.01.T01 | AT1G78380 | 61.792 | 212 | 81 | 0 | 8 | 219 | 3 | 214 | 4.46e-99 | 287 |
| MsG0380015009.01.T01 | AT1G17180 | 62.673 | 217 | 81 | 0 | 8 | 224 | 3 | 219 | 7.16e-99 | 286 |
| MsG0380015009.01.T01 | AT1G17170 | 61.290 | 217 | 83 | 1 | 8 | 224 | 3 | 218 | 3.26e-93 | 272 |
| MsG0380015009.01.T01 | AT1G78360 | 59.722 | 216 | 86 | 1 | 10 | 224 | 5 | 220 | 8.36e-93 | 271 |
| MsG0380015009.01.T01 | AT1G78340 | 55.660 | 212 | 94 | 0 | 8 | 219 | 3 | 214 | 4.11e-88 | 259 |
| MsG0380015009.01.T01 | AT1G53680 | 56.682 | 217 | 92 | 2 | 10 | 224 | 8 | 224 | 1.13e-86 | 256 |
| MsG0380015009.01.T01 | AT1G78320 | 58.333 | 204 | 85 | 0 | 7 | 210 | 2 | 205 | 1.55e-83 | 248 |
| MsG0380015009.01.T01 | AT1G17190 | 50.917 | 218 | 107 | 0 | 5 | 222 | 1 | 218 | 1.86e-78 | 235 |
| MsG0380015009.01.T01 | AT3G43800 | 50.679 | 221 | 105 | 3 | 5 | 221 | 1 | 221 | 5.43e-75 | 226 |
| MsG0380015009.01.T01 | AT1G78320 | 50.490 | 204 | 74 | 1 | 7 | 210 | 2 | 178 | 7.67e-66 | 202 |
| MsG0380015009.01.T01 | AT1G10360 | 44.495 | 218 | 113 | 4 | 5 | 214 | 1 | 218 | 6.54e-53 | 170 |
| MsG0380015009.01.T01 | AT1G10370 | 42.661 | 218 | 117 | 4 | 5 | 214 | 1 | 218 | 6.69e-48 | 157 |
| MsG0380015009.01.T01 | AT2G29420 | 40.097 | 207 | 121 | 3 | 1 | 205 | 1 | 206 | 7.38e-48 | 157 |
| MsG0380015009.01.T01 | AT3G09270 | 39.423 | 208 | 121 | 4 | 7 | 210 | 4 | 210 | 3.86e-47 | 155 |
| MsG0380015009.01.T01 | AT1G59700 | 42.009 | 219 | 112 | 6 | 7 | 213 | 4 | 219 | 6.72e-46 | 152 |
| MsG0380015009.01.T01 | AT1G74590 | 37.500 | 224 | 124 | 5 | 7 | 219 | 5 | 223 | 3.58e-45 | 150 |
| MsG0380015009.01.T01 | AT5G62480 | 39.252 | 214 | 119 | 5 | 6 | 209 | 5 | 217 | 2.68e-44 | 149 |
| MsG0380015009.01.T01 | AT2G29440 | 39.512 | 205 | 112 | 4 | 8 | 205 | 5 | 204 | 6.96e-42 | 142 |
| MsG0380015009.01.T01 | AT1G59670 | 38.009 | 221 | 128 | 5 | 7 | 218 | 4 | 224 | 1.31e-40 | 139 |
| MsG0380015009.01.T01 | AT1G27130 | 36.000 | 225 | 132 | 5 | 1 | 216 | 1 | 222 | 1.66e-40 | 138 |
| MsG0380015009.01.T01 | AT2G29490 | 39.336 | 211 | 114 | 5 | 7 | 209 | 5 | 209 | 2.25e-40 | 138 |
| MsG0380015009.01.T01 | AT1G69930 | 35.747 | 221 | 135 | 3 | 1 | 214 | 4 | 224 | 9.01e-40 | 137 |
| MsG0380015009.01.T01 | AT2G29480 | 39.614 | 207 | 111 | 6 | 7 | 205 | 5 | 205 | 4.75e-39 | 134 |
| MsG0380015009.01.T01 | AT1G27140 | 34.956 | 226 | 134 | 5 | 1 | 216 | 1 | 223 | 5.51e-38 | 132 |
| MsG0380015009.01.T01 | AT2G29450 | 37.156 | 218 | 125 | 5 | 7 | 217 | 4 | 216 | 6.52e-38 | 132 |
| MsG0380015009.01.T01 | AT2G29460 | 37.931 | 203 | 120 | 4 | 7 | 205 | 5 | 205 | 3.05e-35 | 125 |
| MsG0380015009.01.T01 | AT1G69920 | 32.000 | 225 | 140 | 5 | 1 | 214 | 26 | 248 | 1.84e-34 | 124 |
| MsG0380015009.01.T01 | AT2G29470 | 36.058 | 208 | 126 | 5 | 7 | 209 | 5 | 210 | 3.93e-34 | 122 |
| MsG0380015009.01.T01 | AT5G62480 | 31.308 | 214 | 110 | 6 | 6 | 209 | 5 | 191 | 4.17e-25 | 98.6 |
| MsG0380015009.01.T01 | AT5G62480 | 31.308 | 214 | 109 | 6 | 6 | 209 | 5 | 190 | 5.20e-25 | 98.2 |
| MsG0380015009.01.T01 | AT5G02780 | 32.044 | 181 | 109 | 9 | 20 | 194 | 41 | 213 | 2.59e-11 | 61.6 |
| MsG0380015009.01.T01 | AT5G02780 | 32.044 | 181 | 109 | 9 | 20 | 194 | 41 | 213 | 2.59e-11 | 61.6 |
| MsG0380015009.01.T01 | AT5G02780 | 30.556 | 180 | 111 | 8 | 20 | 194 | 41 | 211 | 5.11e-11 | 60.8 |
Find 39 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCGATCACAAGCCAAGTTT+TGG | 0.285418 | 3:+63883751 | MsG0380015009.01.T01:CDS |
| CCTCACCCTCACAAAATCTA+TGG | 0.311690 | 3:+63885535 | MsG0380015009.01.T01:CDS |
| CTCTTATACCCTTCACTAGT+TGG | 0.329236 | 3:+63885404 | MsG0380015009.01.T01:CDS |
| AAGTCATCTCCATCAAAATA+TGG | 0.330764 | 3:-63885364 | None:intergenic |
| TATATTAAGTGATTCACATA+TGG | 0.358906 | 3:-63883667 | None:intergenic |
| TTTCCATTATGAATCAAAAC+CGG | 0.387956 | 3:-63883642 | None:intergenic |
| TTTACACTTACGAGATATAT+GGG | 0.406047 | 3:+63885428 | MsG0380015009.01.T01:CDS |
| GTGTCCTAAGCTTGTAGCTT+GGG | 0.417667 | 3:+63885471 | MsG0380015009.01.T01:CDS |
| TTGGCCCAAGCTACAAGCTT+AGG | 0.422848 | 3:-63885475 | None:intergenic |
| ATATTAAGTGATTCACATAT+GGG | 0.451582 | 3:-63883666 | None:intergenic |
| AGCTTGTAGCTTGGGCCAAA+AGG | 0.454879 | 3:+63885479 | MsG0380015009.01.T01:CDS |
| AATGAGAGTGAAAATTGCTT+TGG | 0.455938 | 3:+63883527 | MsG0380015009.01.T01:CDS |
| TTGAGTACATTGATGAAGCT+TGG | 0.459310 | 3:+63883691 | MsG0380015009.01.T01:CDS |
| GAAGGCTTGAAGACTCTAGA+AGG | 0.460833 | 3:+63885325 | MsG0380015009.01.T01:CDS |
| TTGGCTTGTGATCGCTTGAA+AGG | 0.469012 | 3:-63883744 | None:intergenic |
| GAAAATTGCTTTGGAAGAGA+AGG | 0.474522 | 3:+63883536 | MsG0380015009.01.T01:CDS |
| AATGTAATCTCCCCAAAACT+TGG | 0.487995 | 3:-63883763 | None:intergenic |
| TTCCATTATGAATCAAAACC+GGG | 0.499687 | 3:-63883641 | None:intergenic |
| AGCTTGGGCCAAAAGGTGTA+TGG | 0.501382 | 3:+63885486 | MsG0380015009.01.T01:CDS |
| AAAATTGCTTTGGAAGAGAA+GGG | 0.501739 | 3:+63883537 | MsG0380015009.01.T01:CDS |
| AAGACTCTAGAAGGTGAGCT+TGG | 0.503893 | 3:+63885334 | MsG0380015009.01.T01:CDS |
| TGGCTTGTGATCGCTTGAAA+GGG | 0.511102 | 3:-63883743 | None:intergenic |
| ACTCTCATTGCATATACGCT+TGG | 0.513803 | 3:-63883513 | None:intergenic |
| AGGAAAGGTTGAAGAACAAG+AGG | 0.520776 | 3:+63885282 | MsG0380015009.01.T01:CDS |
| AATGAGTCAAAACATGACTA+AGG | 0.525858 | 3:+63883464 | None:intergenic |
| ACAGCATTCGAAGGAAGCTA+TGG | 0.529203 | 3:+63885257 | MsG0380015009.01.T01:CDS |
| AGTGTCCTAAGCTTGTAGCT+TGG | 0.541196 | 3:+63885470 | MsG0380015009.01.T01:CDS |
| TGACTTTGGGTATGTTGATG+TGG | 0.546781 | 3:+63885381 | MsG0380015009.01.T01:CDS |
| ATGCAATATAAACAAAGTCA+TGG | 0.553941 | 3:+63885565 | MsG0380015009.01.T01:CDS |
| AGTGTAAAACCAACTAGTGA+AGG | 0.558553 | 3:-63885413 | None:intergenic |
| AAGGTTGAAGAACAAGAGGA+AGG | 0.559445 | 3:+63885286 | MsG0380015009.01.T01:CDS |
| GGGTCAGAGGGCAAAAGAGA+AGG | 0.585068 | 3:-63883723 | None:intergenic |
| TGATCGCTTGAAAGGGTCAG+AGG | 0.611869 | 3:-63883736 | None:intergenic |
| CGTAGGTATACAGCATTCGA+AGG | 0.619438 | 3:+63885248 | MsG0380015009.01.T01:intron |
| GTGTAAAACCAACTAGTGAA+GGG | 0.625155 | 3:-63885412 | None:intergenic |
| ATTCGAAGGAAGCTATGGAA+AGG | 0.640495 | 3:+63885262 | MsG0380015009.01.T01:CDS |
| GATCGCTTGAAAGGGTCAGA+GGG | 0.644766 | 3:-63883735 | None:intergenic |
| AAGGAAGCTATGGAAAGGAA+AGG | 0.650275 | 3:+63885267 | MsG0380015009.01.T01:CDS |
| AAACATGACTAAGGACAGTG+TGG | 0.712979 | 3:+63883473 | MsG0380015009.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAAAACTAATTTTAAAAT+AGG | - | Chr3:63884204-63884223 | None:intergenic | 10.0% |
| !!! | ATATGATTTTACTTTAAAAT+AGG | + | Chr3:63884455-63884474 | MsG0380015009.01.T01:intron | 10.0% |
| !!! | ATGAATTTTTATATTTTTGA+TGG | - | Chr3:63884332-63884351 | None:intergenic | 10.0% |
| !!! | CAAAAACTAATTTTAAAATA+GGG | - | Chr3:63884203-63884222 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAGTTTTATTCAT+AGG | + | Chr3:63885191-63885210 | MsG0380015009.01.T01:intron | 10.0% |
| !!! | TATGATTTTACTTTAAAATA+GGG | + | Chr3:63884456-63884475 | MsG0380015009.01.T01:intron | 10.0% |
| !! | AAAATATGGTTCAATATTTA+TGG | - | Chr3:63885014-63885033 | None:intergenic | 15.0% |
| !! | ATATTCAAACATAAATCATT+GGG | - | Chr3:63884590-63884609 | None:intergenic | 15.0% |
| !! | CACTTATTGTTAAAAATTAT+TGG | + | Chr3:63884737-63884756 | MsG0380015009.01.T01:intron | 15.0% |
| !! | GAAAAGTTTGTATATTTATA+GGG | - | Chr3:63884112-63884131 | None:intergenic | 15.0% |
| !! | GTTAAATGTAAAATGATTTA+GGG | + | Chr3:63884069-63884088 | MsG0380015009.01.T01:intron | 15.0% |
| !! | TATATTCAAACATAAATCAT+TGG | - | Chr3:63884591-63884610 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | Chr3:63884487-63884506 | MsG0380015009.01.T01:intron | 15.0% |
| !! | AATCGATTATGATTAAAAGT+TGG | + | Chr3:63884047-63884066 | MsG0380015009.01.T01:intron | 20.0% |
| !! | ATATACTAGTTCACAAAATA+TGG | - | Chr3:63885028-63885047 | None:intergenic | 20.0% |
| !! | ATATTAAGTGATTCACATAT+GGG | - | Chr3:63883669-63883688 | None:intergenic | 20.0% |
| !! | ATGGATAATAATGTAAAAGT+GGG | - | Chr3:63885069-63885088 | None:intergenic | 20.0% |
| !! | CGAAAAGTTTGTATATTTAT+AGG | - | Chr3:63884113-63884132 | None:intergenic | 20.0% |
| !! | GGTTAAATGTAAAATGATTT+AGG | + | Chr3:63884068-63884087 | MsG0380015009.01.T01:intron | 20.0% |
| !! | TATATTAAGTGATTCACATA+TGG | - | Chr3:63883670-63883689 | None:intergenic | 20.0% |
| !! | TATGGATAATAATGTAAAAG+TGG | - | Chr3:63885070-63885089 | None:intergenic | 20.0% |
| !! | TGAATTGCATAATAAATTCA+AGG | + | Chr3:63884784-63884803 | MsG0380015009.01.T01:intron | 20.0% |
| !! | TGACCAAAAAAAAAAAATCA+AGG | + | Chr3:63884811-63884830 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | ATATTATGGCTTAATTTTGT+TGG | + | Chr3:63885214-63885233 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | ATTTGTATGTTTTTTACCAA+TGG | + | Chr3:63883838-63883857 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | Chr3:63884547-63884566 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | Chr3:63884486-63884505 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | GTTTTATTCATAGGATATTA+TGG | + | Chr3:63885200-63885219 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | TAGCCTTGATTTTTTTTTTT+TGG | - | Chr3:63884817-63884836 | None:intergenic | 20.0% |
| !!! | TAGTGACTGAAAATTTTATA+GGG | - | Chr3:63884172-63884191 | None:intergenic | 20.0% |
| !!! | TGAAAAGTTGGTATATTTAT+AGG | + | Chr3:63884546-63884565 | MsG0380015009.01.T01:intron | 20.0% |
| !!! | TGTTTGTTTGATTTCAATTT+CGG | - | Chr3:63884975-63884994 | None:intergenic | 20.0% |
| !!! | TTCACTTTTACATGAATAAA+AGG | - | Chr3:63884768-63884787 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | + | Chr3:63884085-63884104 | MsG0380015009.01.T01:intron | 20.0% |
| ! | ATGCAATATAAACAAAGTCA+TGG | + | Chr3:63885565-63885584 | MsG0380015009.01.T01:CDS | 25.0% |
| ! | GGTAAAAAGAAGTTTATAGA+AGG | + | Chr3:63885307-63885326 | MsG0380015009.01.T01:CDS | 25.0% |
| ! | TTAAGCATTATGAATTCAGT+AGG | - | Chr3:63883886-63883905 | None:intergenic | 25.0% |
| ! | TTGAATGGTATAATGTGTTA+AGG | - | Chr3:63884915-63884934 | None:intergenic | 25.0% |
| ! | TTTACACTTACGAGATATAT+GGG | + | Chr3:63885428-63885447 | MsG0380015009.01.T01:CDS | 25.0% |
| ! | TTTCCATTATGAATCAAAAC+CGG | - | Chr3:63883645-63883664 | None:intergenic | 25.0% |
| !! | AAATTTTCAATCACTACCTT+TGG | - | Chr3:63884483-63884502 | None:intergenic | 25.0% |
| !! | AAATTTTCAGTCACTACTTT+TGG | + | Chr3:63884176-63884195 | MsG0380015009.01.T01:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | Chr3:63884515-63884534 | MsG0380015009.01.T01:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | Chr3:63884534-63884515 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | Chr3:63884516-63884535 | MsG0380015009.01.T01:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | Chr3:63884535-63884516 | None:intergenic | 25.0% |
| !! | CATTGGGTTAAATATGTTTT+TGG | - | Chr3:63884574-63884593 | None:intergenic | 25.0% |
| !! | CTTTTACATGAATAAAAGGA+CGG | - | Chr3:63884764-63884783 | None:intergenic | 25.0% |
| !! | GTAGTGACTGAAAATTTTAT+AGG | - | Chr3:63884173-63884192 | None:intergenic | 25.0% |
| !! | TTTTACACTTACGAGATATA+TGG | + | Chr3:63885427-63885446 | MsG0380015009.01.T01:CDS | 25.0% |
| !!! | GATATAGTATTGACTTTGAA+TGG | - | Chr3:63884930-63884949 | None:intergenic | 25.0% |
| AAGTCATCTCCATCAAAATA+TGG | - | Chr3:63885367-63885386 | None:intergenic | 30.0% | |
| AATGAGAGTGAAAATTGCTT+TGG | + | Chr3:63883527-63883546 | MsG0380015009.01.T01:CDS | 30.0% | |
| CATATATTCAACCTTGTTCT+AGG | + | Chr3:63884711-63884730 | MsG0380015009.01.T01:intron | 30.0% | |
| TGAATATATTCTTGCAGTGT+CGG | + | Chr3:63884603-63884622 | MsG0380015009.01.T01:intron | 30.0% | |
| TGAATTCAGTAGGTTAGATT+TGG | - | Chr3:63883876-63883895 | None:intergenic | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | + | Chr3:63884502-63884521 | MsG0380015009.01.T01:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | Chr3:63884521-63884502 | None:intergenic | 30.0% | |
| TTCCATTATGAATCAAAACC+GGG | - | Chr3:63883644-63883663 | None:intergenic | 30.0% | |
| ! | ACACACCAAAATTGACTTTA+TGG | - | Chr3:63885147-63885166 | None:intergenic | 30.0% |
| ! | ATAGCCCATAAAGTCAATTT+TGG | + | Chr3:63885139-63885158 | MsG0380015009.01.T01:intron | 30.0% |
| ! | ATTTTCACTAAGTGTGTGTT+TGG | + | Chr3:63883980-63883999 | MsG0380015009.01.T01:intron | 30.0% |
| ! | CAAAACCATAGATTTTGTGA+GGG | - | Chr3:63885543-63885562 | None:intergenic | 30.0% |
| ! | CACACCAAAATTGACTTTAT+GGG | - | Chr3:63885146-63885165 | None:intergenic | 30.0% |
| ! | TGTTTGATTTCAATTTCGGT+GGG | - | Chr3:63884971-63884990 | None:intergenic | 30.0% |
| ! | TTGTTTGATTTCAATTTCGG+TGG | - | Chr3:63884972-63884991 | None:intergenic | 30.0% |
| !! | AAAATTGCTTTGGAAGAGAA+GGG | + | Chr3:63883537-63883556 | MsG0380015009.01.T01:CDS | 30.0% |
| !! | ATTTTGATGGAGATGACTTT+GGG | + | Chr3:63885368-63885387 | MsG0380015009.01.T01:CDS | 30.0% |
| !! | TACTTTAAAATAGGGACCAA+AGG | + | Chr3:63884464-63884483 | MsG0380015009.01.T01:intron | 30.0% |
| !!! | TATTTTGATGGAGATGACTT+TGG | + | Chr3:63885367-63885386 | MsG0380015009.01.T01:CDS | 30.0% |
| AATAAGTGAGACCTAGAACA+AGG | - | Chr3:63884725-63884744 | None:intergenic | 35.0% | |
| AATGTAATCTCCCCAAAACT+TGG | - | Chr3:63883766-63883785 | None:intergenic | 35.0% | |
| AGTGTAAAACCAACTAGTGA+AGG | - | Chr3:63885416-63885435 | None:intergenic | 35.0% | |
| ATTCAGTAGGTTAGATTTGG+AGG | - | Chr3:63883873-63883892 | None:intergenic | 35.0% | |
| GAGGGACTAAAATGAAAAGT+TGG | + | Chr3:63884534-63884553 | MsG0380015009.01.T01:intron | 35.0% | |
| GTGTAAAACCAACTAGTGAA+GGG | - | Chr3:63885415-63885434 | None:intergenic | 35.0% | |
| TGTTGGATTCTAATTGACGT+AGG | + | Chr3:63885231-63885250 | MsG0380015009.01.T01:intron | 35.0% | |
| TTGAGTACATTGATGAAGCT+TGG | + | Chr3:63883691-63883710 | MsG0380015009.01.T01:CDS | 35.0% | |
| ! | CTCTTTTTCCATACACCTTT+TGG | - | Chr3:63885497-63885516 | None:intergenic | 35.0% |
| ! | GCAAAACCATAGATTTTGTG+AGG | - | Chr3:63885544-63885563 | None:intergenic | 35.0% |
| ! | GTTTGATTTCAATTTCGGTG+GGG | - | Chr3:63884970-63884989 | None:intergenic | 35.0% |
| !! | GAAAATTGCTTTGGAAGAGA+AGG | + | Chr3:63883536-63883555 | MsG0380015009.01.T01:CDS | 35.0% |
| !!! | ATCCCGGTTTTGATTCATAA+TGG | + | Chr3:63883639-63883658 | MsG0380015009.01.T01:CDS | 35.0% |
| AAACATGACTAAGGACAGTG+TGG | + | Chr3:63883473-63883492 | MsG0380015009.01.T01:CDS | 40.0% | |
| AAGGAAGCTATGGAAAGGAA+AGG | + | Chr3:63885267-63885286 | MsG0380015009.01.T01:CDS | 40.0% | |
| AAGGTTGAAGAACAAGAGGA+AGG | + | Chr3:63885286-63885305 | MsG0380015009.01.T01:CDS | 40.0% | |
| ACTCTCATTGCATATACGCT+TGG | - | Chr3:63883516-63883535 | None:intergenic | 40.0% | |
| AGGAAAGGTTGAAGAACAAG+AGG | + | Chr3:63885282-63885301 | MsG0380015009.01.T01:CDS | 40.0% | |
| ATTCGAAGGAAGCTATGGAA+AGG | + | Chr3:63885262-63885281 | MsG0380015009.01.T01:CDS | 40.0% | |
| CTCTTATACCCTTCACTAGT+TGG | + | Chr3:63885404-63885423 | MsG0380015009.01.T01:CDS | 40.0% | |
| GTGTATGGAAAAAGAGAGTG+TGG | + | Chr3:63885501-63885520 | MsG0380015009.01.T01:CDS | 40.0% | |
| TGACTTTGGGTATGTTGATG+TGG | + | Chr3:63885381-63885400 | MsG0380015009.01.T01:CDS | 40.0% | |
| ! | ACCGGGATCTTTTTGTAAAC+CGG | - | Chr3:63883627-63883646 | None:intergenic | 40.0% |
| ! | CTTTCATGTGATTGCCACTT+GGG | - | Chr3:63885100-63885119 | None:intergenic | 40.0% |
| !! | GGAGACAAGCCATATTTTGA+TGG | + | Chr3:63885355-63885374 | MsG0380015009.01.T01:CDS | 40.0% |
| !! | TCTGCTTTTAGAGATGAACC+CGG | + | Chr3:63883605-63883624 | MsG0380015009.01.T01:CDS | 40.0% |
| !!! | AAGGACAGTGTGGTTTTGTT+GGG | + | Chr3:63883483-63883502 | MsG0380015009.01.T01:CDS | 40.0% |
| !!! | GTGTGGTTTTGTTGGGTTTT+TGG | + | Chr3:63883490-63883509 | MsG0380015009.01.T01:CDS | 40.0% |
| !!! | TAAGGACAGTGTGGTTTTGT+TGG | + | Chr3:63883482-63883501 | MsG0380015009.01.T01:CDS | 40.0% |
| ACAGCATTCGAAGGAAGCTA+TGG | + | Chr3:63885257-63885276 | MsG0380015009.01.T01:CDS | 45.0% | |
| AGTGTCCTAAGCTTGTAGCT+TGG | + | Chr3:63885470-63885489 | MsG0380015009.01.T01:CDS | 45.0% | |
| ATCCATACTTCAAGCCCAAG+TGG | + | Chr3:63885083-63885102 | MsG0380015009.01.T01:intron | 45.0% | |
| CCAAGTGGCAATCACATGAA+AGG | + | Chr3:63885098-63885117 | MsG0380015009.01.T01:intron | 45.0% | |
| CCCGGTTTACAAAAAGATCC+CGG | + | Chr3:63883623-63883642 | MsG0380015009.01.T01:CDS | 45.0% | |
| CCTCACCCTCACAAAATCTA+TGG | + | Chr3:63885535-63885554 | MsG0380015009.01.T01:CDS | 45.0% | |
| CCTTTCATGTGATTGCCACT+TGG | - | Chr3:63885101-63885120 | None:intergenic | 45.0% | |
| CGTAGGTATACAGCATTCGA+AGG | + | Chr3:63885248-63885267 | MsG0380015009.01.T01:intron | 45.0% | |
| GAAGGCTTGAAGACTCTAGA+AGG | + | Chr3:63885325-63885344 | MsG0380015009.01.T01:CDS | 45.0% | |
| GTGTCCTAAGCTTGTAGCTT+GGG | + | Chr3:63885471-63885490 | MsG0380015009.01.T01:CDS | 45.0% | |
| ! | AAGACTCTAGAAGGTGAGCT+TGG | + | Chr3:63885334-63885353 | MsG0380015009.01.T01:CDS | 45.0% |
| ! | AGCGATCACAAGCCAAGTTT+TGG | + | Chr3:63883751-63883770 | MsG0380015009.01.T01:CDS | 45.0% |
| ! | CCATAGATTTTGTGAGGGTG+AGG | - | Chr3:63885538-63885557 | None:intergenic | 45.0% |
| ! | CCGGGATCTTTTTGTAAACC+GGG | - | Chr3:63883626-63883645 | None:intergenic | 45.0% |
| ! | CGATCACAAGCCAAGTTTTG+GGG | + | Chr3:63883753-63883772 | MsG0380015009.01.T01:CDS | 45.0% |
| ! | GCGATCACAAGCCAAGTTTT+GGG | + | Chr3:63883752-63883771 | MsG0380015009.01.T01:CDS | 45.0% |
| ! | TGGCTTGTGATCGCTTGAAA+GGG | - | Chr3:63883746-63883765 | None:intergenic | 45.0% |
| !! | TTGGCTTGTGATCGCTTGAA+AGG | - | Chr3:63883747-63883766 | None:intergenic | 45.0% |
| !! | TAAAAAAAAAATTATATGTT+TGG | - | Chr3:63885173-63885192 | None:intergenic | 5.0% |
| !!! | AAAAAAATCTATTTTTTTTT+GGG | - | Chr3:63884278-63884297 | None:intergenic | 5.0% |
| !!! | ATAAAATTCTAAATTTTTTT+GGG | + | Chr3:63884371-63884390 | MsG0380015009.01.T01:intron | 5.0% |
| !!! | TAAAAAAATCTATTTTTTTT+TGG | - | Chr3:63884279-63884298 | None:intergenic | 5.0% |
| !!! | TATAAAATTCTAAATTTTTT+TGG | + | Chr3:63884370-63884389 | MsG0380015009.01.T01:intron | 5.0% |
| AGCTTGTAGCTTGGGCCAAA+AGG | + | Chr3:63885479-63885498 | MsG0380015009.01.T01:CDS | 50.0% | |
| GATCGCTTGAAAGGGTCAGA+GGG | - | Chr3:63883738-63883757 | None:intergenic | 50.0% | |
| TGATCGCTTGAAAGGGTCAG+AGG | - | Chr3:63883739-63883758 | None:intergenic | 50.0% | |
| TTGGAGGCTGAACGATCCAT+TGG | - | Chr3:63883857-63883876 | None:intergenic | 50.0% | |
| TTGGCCCAAGCTACAAGCTT+AGG | - | Chr3:63885478-63885497 | None:intergenic | 50.0% | |
| ! | AGCTTGGGCCAAAAGGTGTA+TGG | + | Chr3:63885486-63885505 | MsG0380015009.01.T01:CDS | 50.0% |
| ! | TGCCACTTGGGCTTGAAGTA+TGG | - | Chr3:63885088-63885107 | None:intergenic | 50.0% |
| !! | ATTCTTGCAGTGTCGGCTCA+AGG | + | Chr3:63884610-63884629 | MsG0380015009.01.T01:intron | 50.0% |
| !! | GGGTGTTTTAGGCTCACAGA+AGG | + | Chr3:63884631-63884650 | MsG0380015009.01.T01:intron | 50.0% |
| !! | TTCTTGCAGTGTCGGCTCAA+GGG | + | Chr3:63884611-63884630 | MsG0380015009.01.T01:intron | 50.0% |
| !!! | TGTCGGCTCAAGGGTGTTTT+AGG | + | Chr3:63884620-63884639 | MsG0380015009.01.T01:intron | 50.0% |
| GGGTCAGAGGGCAAAAGAGA+AGG | - | Chr3:63883726-63883745 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 63883465 | 63885597 | 63883465 | ID=MsG0380015009.01;Name=MsG0380015009.01 |
| Chr3 | mRNA | 63883465 | 63885597 | 63883465 | ID=MsG0380015009.01.T01;Parent=MsG0380015009.01;Name=MsG0380015009.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|224 |
| Chr3 | exon | 63883465 | 63883794 | 63883465 | ID=MsG0380015009.01.T01:exon:29785;Parent=MsG0380015009.01.T01 |
| Chr3 | exon | 63885253 | 63885597 | 63885253 | ID=MsG0380015009.01.T01:exon:29786;Parent=MsG0380015009.01.T01 |
| Chr3 | CDS | 63883465 | 63883794 | 63883465 | ID=MsG0380015009.01.T01:cds;Parent=MsG0380015009.01.T01 |
| Chr3 | CDS | 63885253 | 63885597 | 63885253 | ID=MsG0380015009.01.T01:cds;Parent=MsG0380015009.01.T01 |
| Gene Sequence |
| Protein sequence |
