Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007912.01.T01 | ADB44209.1 | 100 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 1.76E-106 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007912.01.T01 | Q06931 | 87.261 | 157 | 20 | 0 | 1 | 157 | 1 | 157 | 2.72E-94 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007912.01.T01 | D2Y175 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 8.39e-107 | 310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048202.01 | MsG0280007912.01 | 0.817575 | 3.070997e-52 | 2.244808e-49 |
| MsG0080048595.01 | MsG0280007912.01 | 0.815439 | 9.238736e-52 | 6.370055e-49 |
| MsG0080049133.01 | MsG0280007912.01 | -0.802316 | 5.945304e-49 | 2.903424e-46 |
| MsG0180000322.01 | MsG0280007912.01 | -0.812899 | 3.361118e-51 | 2.163144e-48 |
| MsG0180000583.01 | MsG0280007912.01 | 0.804780 | 1.832513e-49 | 9.532673e-47 |
| MsG0180001116.01 | MsG0280007912.01 | -0.828191 | 1.031077e-54 | 1.017530e-51 |
| MsG0180002463.01 | MsG0280007912.01 | -0.806947 | 6.422100e-50 | 3.531629e-47 |
| MsG0180003604.01 | MsG0280007912.01 | 0.811662 | 6.259058e-51 | 3.897097e-48 |
| MsG0180004266.01 | MsG0280007912.01 | 0.804638 | 1.962000e-49 | 1.016840e-46 |
| MsG0180004773.01 | MsG0280007912.01 | -0.832776 | 7.795115e-56 | 8.801096e-53 |
| MsG0180004941.01 | MsG0280007912.01 | 0.806073 | 9.819210e-50 | 5.280215e-47 |
| MsG0180005648.01 | MsG0280007912.01 | 0.805731 | 1.158702e-49 | 6.176934e-47 |
| MsG0280006451.01 | MsG0280007912.01 | -0.803450 | 3.465400e-49 | 1.742003e-46 |
| MsG0280006606.01 | MsG0280007912.01 | 0.833401 | 5.447060e-56 | 6.266094e-53 |
| MsG0280006964.01 | MsG0280007912.01 | -0.801355 | 9.362053e-49 | 4.461720e-46 |
| MsG0280007902.01 | MsG0280007912.01 | -0.806596 | 7.619511e-50 | 4.152254e-47 |
| MsG0280007911.01 | MsG0280007912.01 | 0.829007 | 6.547074e-55 | 6.615912e-52 |
| MsG0280007912.01 | MsG0280007914.01 | 0.821506 | 3.894208e-53 | 3.173974e-50 |
| MsG0280007912.01 | MsG0280007916.01 | 0.860707 | 1.712522e-63 | 4.724784e-60 |
| MsG0280007912.01 | MsG0280008263.01 | 0.821638 | 3.629638e-53 | 2.969490e-50 |
| MsG0280007912.01 | MsG0280010019.01 | 0.822865 | 1.884086e-53 | 1.596290e-50 |
| MsG0280007912.01 | MsG0280010047.01 | 0.822418 | 2.393691e-53 | 2.002489e-50 |
| MsG0280007912.01 | MsG0280010054.01 | 0.832430 | 9.495697e-56 | 1.061072e-52 |
| MsG0280007912.01 | MsG0280010055.01 | 0.825505 | 4.518933e-54 | 4.126681e-51 |
| MsG0280007912.01 | MsG0280010461.01 | -0.816050 | 6.753860e-52 | 4.735416e-49 |
| MsG0280007912.01 | MsG0280011449.01 | -0.802990 | 4.316292e-49 | 2.144160e-46 |
| MsG0280007912.01 | MsG0380013300.01 | 0.803008 | 4.278159e-49 | 2.126172e-46 |
| MsG0280007912.01 | MsG0380014802.01 | 0.810262 | 1.257805e-50 | 7.546788e-48 |
| MsG0280007912.01 | MsG0380015009.01 | 0.801820 | 7.516920e-49 | 3.624701e-46 |
| MsG0280007912.01 | MsG0380016086.01 | 0.832968 | 6.981363e-56 | 7.927830e-53 |
| MsG0280007912.01 | MsG0380017610.01 | 0.818833 | 1.594315e-52 | 1.206528e-49 |
| MsG0280007912.01 | MsG0380018070.01 | 0.810676 | 1.023992e-50 | 6.211940e-48 |
| MsG0280007912.01 | MsG0480022935.01 | -0.807395 | 5.161796e-50 | 2.871869e-47 |
| MsG0280007912.01 | MsG0480023107.01 | 0.805352 | 1.391620e-49 | 7.346027e-47 |
| MsG0280007912.01 | MsG0480023267.01 | 0.805811 | 1.114883e-49 | 5.955219e-47 |
| MsG0280007912.01 | MsG0480023382.01 | 0.824403 | 8.227205e-54 | 7.279415e-51 |
| MsG0280007912.01 | MsG0480023695.01 | -0.807433 | 5.067428e-50 | 2.822056e-47 |
| MsG0280007912.01 | MsG0580024219.01 | 0.812131 | 4.946767e-51 | 3.119302e-48 |
| MsG0280007912.01 | MsG0580024408.01 | 0.814956 | 1.183015e-51 | 8.049421e-49 |
| MsG0280007912.01 | MsG0580024990.01 | 0.809578 | 1.765697e-50 | 1.040610e-47 |
| MsG0280007912.01 | MsG0580025510.01 | 0.823157 | 1.610960e-53 | 1.376128e-50 |
| MsG0280007912.01 | MsG0580029820.01 | -0.807811 | 4.212669e-50 | 2.369237e-47 |
| MsG0280007912.01 | MsG0580030133.01 | 0.857928 | 1.168415e-62 | 2.931657e-59 |
| MsG0280007912.01 | MsG0580030135.01 | 0.871959 | 4.592858e-67 | 1.887507e-63 |
| MsG0280007912.01 | MsG0680034317.01 | 0.829956 | 3.850892e-55 | 4.001202e-52 |
| MsG0280007912.01 | MsG0780035993.01 | 0.816564 | 5.182477e-52 | 3.684825e-49 |
| MsG0280007912.01 | MsG0780036421.01 | 0.858226 | 9.529682e-63 | 2.414753e-59 |
| MsG0280007912.01 | MsG0780036426.01 | 0.845256 | 4.547652e-59 | 7.534763e-56 |
| MsG0280007912.01 | MsG0780036471.01 | 0.849457 | 3.194970e-60 | 6.060228e-57 |
| MsG0280007912.01 | MsG0780036661.01 | 0.842662 | 2.254572e-58 | 3.442210e-55 |
| MsG0280007912.01 | MsG0780038263.01 | -0.827889 | 1.218790e-54 | 1.192201e-51 |
| MsG0280007912.01 | MsG0780039978.01 | 0.821237 | 4.491971e-53 | 3.634116e-50 |
| MsG0280007912.01 | MsG0780041510.01 | 0.800725 | 1.259577e-48 | 5.907658e-46 |
| MsG0280007912.01 | MsG0780041583.01 | 0.821713 | 3.488854e-53 | 2.860408e-50 |
| MsG0280007912.01 | MsG0780041652.01 | 0.813889 | 2.036788e-51 | 1.346494e-48 |
| MsG0280007912.01 | MsG0880042895.01 | -0.801921 | 7.165592e-49 | 3.464135e-46 |
| MsG0280007912.01 | MsG0880045150.01 | -0.813209 | 2.874037e-51 | 1.865115e-48 |
| MsG0280007912.01 | MsG0880045151.01 | -0.810412 | 1.167789e-50 | 7.034221e-48 |
| MsG0280007912.01 | MsG0880045755.01 | -0.820315 | 7.321125e-53 | 5.772996e-50 |
| MsG0280007912.01 | MsG0880046227.01 | 0.804971 | 1.672268e-49 | 8.741782e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007912.01.T01 | MTR_2g035190 | 96.815 | 157 | 5 | 0 | 1 | 157 | 1 | 157 | 3.32e-107 | 302 |
| MsG0280007912.01.T01 | MTR_2g035320 | 95.541 | 157 | 7 | 0 | 1 | 157 | 1 | 157 | 8.34e-107 | 301 |
| MsG0280007912.01.T01 | MTR_2g035210 | 91.083 | 157 | 14 | 0 | 1 | 157 | 1 | 157 | 3.07e-101 | 287 |
| MsG0280007912.01.T01 | MTR_2g035220 | 89.809 | 157 | 16 | 0 | 1 | 157 | 1 | 157 | 1.41e-98 | 281 |
| MsG0280007912.01.T01 | MTR_6g033450 | 66.242 | 157 | 53 | 0 | 1 | 157 | 1 | 157 | 2.91e-70 | 209 |
| MsG0280007912.01.T01 | MTR_4g120970 | 66.242 | 157 | 53 | 0 | 1 | 157 | 1 | 157 | 2.91e-70 | 209 |
| MsG0280007912.01.T01 | MTR_2g035100 | 63.694 | 157 | 57 | 0 | 1 | 157 | 1 | 157 | 9.87e-68 | 202 |
| MsG0280007912.01.T01 | MTR_2g035105 | 63.057 | 157 | 58 | 0 | 1 | 157 | 1 | 157 | 8.34e-67 | 200 |
| MsG0280007912.01.T01 | MTR_2g035150 | 63.694 | 157 | 57 | 0 | 1 | 157 | 1 | 157 | 8.81e-67 | 200 |
| MsG0280007912.01.T01 | MTR_2g035130 | 61.783 | 157 | 60 | 0 | 1 | 157 | 1 | 157 | 1.69e-65 | 197 |
| MsG0280007912.01.T01 | MTR_2g035120 | 59.236 | 157 | 64 | 0 | 1 | 157 | 1 | 157 | 3.26e-62 | 189 |
| MsG0280007912.01.T01 | MTR_2g035320 | 90.000 | 100 | 10 | 0 | 58 | 157 | 23 | 122 | 3.12e-61 | 185 |
| MsG0280007912.01.T01 | MTR_2g035170 | 49.045 | 157 | 80 | 0 | 1 | 157 | 1 | 157 | 9.91e-50 | 157 |
| MsG0280007912.01.T01 | MTR_4g120950 | 42.857 | 161 | 85 | 5 | 1 | 157 | 1 | 158 | 3.74e-32 | 112 |
| MsG0280007912.01.T01 | MTR_2g435310 | 32.051 | 156 | 105 | 1 | 1 | 155 | 1 | 156 | 8.55e-30 | 106 |
| MsG0280007912.01.T01 | MTR_4g120760 | 33.758 | 157 | 103 | 1 | 1 | 156 | 1 | 157 | 1.30e-29 | 106 |
| MsG0280007912.01.T01 | MTR_4g120760 | 33.758 | 157 | 103 | 1 | 1 | 156 | 1 | 157 | 1.42e-29 | 106 |
| MsG0280007912.01.T01 | MTR_4g120940 | 65.753 | 73 | 25 | 0 | 85 | 157 | 47 | 119 | 1.07e-24 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTAATTGGCTAGTAATT+AGG | 0.164037 | 2:-22823484 | None:intergenic |
| GTTTAATTGGCTAGTAATTA+GGG | 0.278519 | 2:-22823483 | None:intergenic |
| GGATAGCTTCTTAATAGTTC+CGG | 0.311830 | 2:-22822496 | None:intergenic |
| TACAGCTTAGTGGGAGGAAC+AGG | 0.324066 | 2:+22823268 | MsG0280007912.01.T01:CDS |
| CTTGATAAGTCCAGTTCCTT+TGG | 0.329858 | 2:-22823434 | None:intergenic |
| TTCAACAATTTCAACACTTT+GGG | 0.350751 | 2:-22822460 | None:intergenic |
| CTTCAACAATTTCAACACTT+TGG | 0.364915 | 2:-22822461 | None:intergenic |
| TGGGCAGCAGAAATCACCTT+TGG | 0.387864 | 2:-22822441 | None:intergenic |
| AGATAGAGTTGCATCACCTT+TGG | 0.394288 | 2:-22823386 | None:intergenic |
| AGAGCTTTGTAGAGTTTAGC+TGG | 0.394931 | 2:-22822393 | None:intergenic |
| GATAGCTTCTTAATAGTTCC+GGG | 0.397748 | 2:-22822495 | None:intergenic |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.402462 | 2:+22822468 | MsG0280007912.01.T01:CDS |
| GAGACTAAGGCCAAAGGAAC+TGG | 0.415366 | 2:+22823424 | MsG0280007912.01.T01:CDS |
| GGGCAGCAGAAATCACCTTT+GGG | 0.449440 | 2:-22822440 | None:intergenic |
| TCAGTGGATGAGGCAAACTT+TGG | 0.464386 | 2:+22823238 | MsG0280007912.01.T01:CDS |
| TGCTAAAACGTAGCCCTCAA+TGG | 0.474394 | 2:-22823458 | None:intergenic |
| TGGATATAACTACAGCTTAG+TGG | 0.476164 | 2:+22823258 | MsG0280007912.01.T01:CDS |
| AAAATTGTTGCTGGCTCTGA+TGG | 0.476544 | 2:+22823328 | MsG0280007912.01.T01:CDS |
| CAAAGTGTTGAAATTGTTGA+AGG | 0.502542 | 2:+22822462 | MsG0280007912.01.T01:CDS |
| CAAATTAGATTCAGTGGATG+AGG | 0.505903 | 2:+22823228 | MsG0280007912.01.T01:CDS |
| GGATATAACTACAGCTTAGT+GGG | 0.506709 | 2:+22823259 | MsG0280007912.01.T01:CDS |
| ATCTGAATTACCTTCAACAA+TGG | 0.509250 | 2:-22822517 | None:intergenic |
| TAATTTGTGTAGCACAAAGT+TGG | 0.512097 | 2:-22823212 | None:intergenic |
| GGACTTATCAAGGCCATTGA+GGG | 0.514208 | 2:+22823445 | MsG0280007912.01.T01:CDS |
| CAAAGGAACTGGACTTATCA+AGG | 0.516806 | 2:+22823435 | MsG0280007912.01.T01:CDS |
| AAGAAGCTATCCATTGTTGA+AGG | 0.523757 | 2:+22822507 | MsG0280007912.01.T01:CDS |
| AGCAGTACGTGAGGAGACTA+AGG | 0.536209 | 2:+22823411 | MsG0280007912.01.T01:CDS |
| GAGTTGCATCACCTTTGGTA+TGG | 0.537356 | 2:-22823381 | None:intergenic |
| GCTACACAAATTAGATTCAG+TGG | 0.559555 | 2:+22823222 | MsG0280007912.01.T01:CDS |
| TTTCACTGAAATCTTAACAA+TGG | 0.567421 | 2:-22823356 | None:intergenic |
| ATTGTTGCTGGCTCTGATGG+TGG | 0.570543 | 2:+22823331 | MsG0280007912.01.T01:CDS |
| TGGACTTATCAAGGCCATTG+AGG | 0.572485 | 2:+22823444 | MsG0280007912.01.T01:CDS |
| GTTGAAGGAAATGGAGGACC+CGG | 0.599694 | 2:+22822477 | MsG0280007912.01.T01:CDS |
| GTAGAGTTTAGCTGGAGCCA+CGG | 0.602676 | 2:-22822385 | None:intergenic |
| TGCTGATGAAATCGTCCCAA+AGG | 0.606260 | 2:+22822425 | MsG0280007912.01.T01:CDS |
| CTTAGTGGGAGGAACAGGGT+TGG | 0.609437 | 2:+22823273 | MsG0280007912.01.T01:CDS |
| GAAATTGTTGAAGGAAATGG+AGG | 0.626795 | 2:+22822471 | MsG0280007912.01.T01:CDS |
| TCAGTGAAATACCATACCAA+AGG | 0.652605 | 2:+22823370 | MsG0280007912.01.T01:CDS |
| CGTGAGGAGACTAAGGCCAA+AGG | 0.670663 | 2:+22823418 | MsG0280007912.01.T01:CDS |
| TCTATCTGAAGCAGTACGTG+AGG | 0.676642 | 2:+22823402 | MsG0280007912.01.T01:CDS |
| ACAGCTTAGTGGGAGGAACA+GGG | 0.680453 | 2:+22823269 | MsG0280007912.01.T01:CDS |
| TATAACTACAGCTTAGTGGG+AGG | 0.697586 | 2:+22823262 | MsG0280007912.01.T01:CDS |
| TGATGAACATGTCTCAACCG+TGG | 0.717160 | 2:+22822368 | MsG0280007912.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATAAATAATTATAA+TGG | + | Chr2:22823169-22823188 | MsG0280007912.01.T01:intron | 0.0% |
| !!! | AAATAAAAGTATAACATAAA+TGG | - | Chr2:22822874-22822893 | None:intergenic | 10.0% |
| !!! | TTTGTCAATTTTTAAATAAA+AGG | - | Chr2:22822662-22822681 | None:intergenic | 10.0% |
| !!! | ATTTAACTTCCTTTTTTTTT+TGG | - | Chr2:22822799-22822818 | None:intergenic | 15.0% |
| !!! | ATTTTATACCCAAAAAAAAA+AGG | + | Chr2:22822787-22822806 | MsG0280007912.01.T01:intron | 15.0% |
| !!! | TAATTTAACTTTCTTTTCTT+TGG | - | Chr2:22822767-22822786 | None:intergenic | 15.0% |
| !!! | TTTAACTTCCTTTTTTTTTT+GGG | - | Chr2:22822798-22822817 | None:intergenic | 15.0% |
| !! | AATAGTAATCCAATTCTATT+TGG | + | Chr2:22822836-22822855 | MsG0280007912.01.T01:intron | 20.0% |
| ! | AATAGAATCTTGAGAAATGA+AGG | + | Chr2:22822897-22822916 | MsG0280007912.01.T01:intron | 25.0% |
| ! | AGGGTTATGTCTAATAATTA+TGG | + | Chr2:22822942-22822961 | MsG0280007912.01.T01:intron | 25.0% |
| ! | ATAATTATTAGACATAACCC+TGG | - | Chr2:22822943-22822962 | None:intergenic | 25.0% |
| ! | TATAATGGTTATATTGCAGA+TGG | + | Chr2:22823184-22823203 | MsG0280007912.01.T01:intron | 25.0% |
| ! | TTCAACAATTTCAACACTTT+GGG | - | Chr2:22822463-22822482 | None:intergenic | 25.0% |
| ! | TTCAGATGATTAATGATACT+CGG | + | Chr2:22823082-22823101 | MsG0280007912.01.T01:intron | 25.0% |
| ! | TTTCACTGAAATCTTAACAA+TGG | - | Chr2:22823359-22823378 | None:intergenic | 25.0% |
| !!! | CATCTGAATCATTTTTTTGA+AGG | - | Chr2:22822969-22822988 | None:intergenic | 25.0% |
| ATCTGAATTACCTTCAACAA+TGG | - | Chr2:22822520-22822539 | None:intergenic | 30.0% | |
| CATGACTATCCAAATAGAAT+TGG | - | Chr2:22822848-22822867 | None:intergenic | 30.0% | |
| CTTCAACAATTTCAACACTT+TGG | - | Chr2:22822464-22822483 | None:intergenic | 30.0% | |
| GTTGAAATTGTTGAAGGAAA+TGG | + | Chr2:22822468-22822487 | MsG0280007912.01.T01:CDS | 30.0% | |
| TTGTACCAACAAACTTTGAT+CGG | - | Chr2:22822621-22822640 | None:intergenic | 30.0% | |
| ! | TAATTTGTGTAGCACAAAGT+TGG | - | Chr2:22823215-22823234 | None:intergenic | 30.0% |
| ! | TTTGAGACAAAAATTGTTGC+TGG | + | Chr2:22823319-22823338 | MsG0280007912.01.T01:CDS | 30.0% |
| !! | CAAAGTGTTGAAATTGTTGA+AGG | + | Chr2:22822462-22822481 | MsG0280007912.01.T01:CDS | 30.0% |
| AACAAACTTTGATCGGTTGT+CGG | - | Chr2:22822614-22822633 | None:intergenic | 35.0% | |
| AAGAAGCTATCCATTGTTGA+AGG | + | Chr2:22822507-22822526 | MsG0280007912.01.T01:CDS | 35.0% | |
| ATAATACATAAGCTCGTTCC+AGG | + | Chr2:22822922-22822941 | MsG0280007912.01.T01:intron | 35.0% | |
| CAAATTAGATTCAGTGGATG+AGG | + | Chr2:22823228-22823247 | MsG0280007912.01.T01:CDS | 35.0% | |
| GAAATTGTTGAAGGAAATGG+AGG | + | Chr2:22822471-22822490 | MsG0280007912.01.T01:CDS | 35.0% | |
| GACAAACATGATGTGACAAA+TGG | + | Chr2:22822676-22822695 | MsG0280007912.01.T01:intron | 35.0% | |
| GATAGCTTCTTAATAGTTCC+GGG | - | Chr2:22822498-22822517 | None:intergenic | 35.0% | |
| GCTACACAAATTAGATTCAG+TGG | + | Chr2:22823222-22823241 | MsG0280007912.01.T01:CDS | 35.0% | |
| GGATAGCTTCTTAATAGTTC+CGG | - | Chr2:22822499-22822518 | None:intergenic | 35.0% | |
| GGATATAACTACAGCTTAGT+GGG | + | Chr2:22823259-22823278 | MsG0280007912.01.T01:CDS | 35.0% | |
| TAATACATAAGCTCGTTCCA+GGG | + | Chr2:22822923-22822942 | MsG0280007912.01.T01:intron | 35.0% | |
| TCAGTGAAATACCATACCAA+AGG | + | Chr2:22823370-22823389 | MsG0280007912.01.T01:CDS | 35.0% | |
| TGGATATAACTACAGCTTAG+TGG | + | Chr2:22823258-22823277 | MsG0280007912.01.T01:CDS | 35.0% | |
| AGATAGAGTTGCATCACCTT+TGG | - | Chr2:22823389-22823408 | None:intergenic | 40.0% | |
| CAAAGGAACTGGACTTATCA+AGG | + | Chr2:22823435-22823454 | MsG0280007912.01.T01:CDS | 40.0% | |
| CTTGATAAGTCCAGTTCCTT+TGG | - | Chr2:22823437-22823456 | None:intergenic | 40.0% | |
| GACAACCGATCAAAGTTTGT+TGG | + | Chr2:22822613-22822632 | MsG0280007912.01.T01:intron | 40.0% | |
| TATAACTACAGCTTAGTGGG+AGG | + | Chr2:22823262-22823281 | MsG0280007912.01.T01:CDS | 40.0% | |
| ! | AGAGCTTTGTAGAGTTTAGC+TGG | - | Chr2:22822396-22822415 | None:intergenic | 40.0% |
| !! | AAAATTGTTGCTGGCTCTGA+TGG | + | Chr2:22823328-22823347 | MsG0280007912.01.T01:CDS | 40.0% |
| GAGTTGCATCACCTTTGGTA+TGG | - | Chr2:22823384-22823403 | None:intergenic | 45.0% | |
| GGACTTATCAAGGCCATTGA+GGG | + | Chr2:22823445-22823464 | MsG0280007912.01.T01:CDS | 45.0% | |
| TCAGTGGATGAGGCAAACTT+TGG | + | Chr2:22823238-22823257 | MsG0280007912.01.T01:CDS | 45.0% | |
| TGATGAACATGTCTCAACCG+TGG | + | Chr2:22822368-22822387 | MsG0280007912.01.T01:CDS | 45.0% | |
| TGCTAAAACGTAGCCCTCAA+TGG | - | Chr2:22823461-22823480 | None:intergenic | 45.0% | |
| TGCTGATGAAATCGTCCCAA+AGG | + | Chr2:22822425-22822444 | MsG0280007912.01.T01:CDS | 45.0% | |
| TGGACTTATCAAGGCCATTG+AGG | + | Chr2:22823444-22823463 | MsG0280007912.01.T01:CDS | 45.0% | |
| ! | TCTATCTGAAGCAGTACGTG+AGG | + | Chr2:22823402-22823421 | MsG0280007912.01.T01:CDS | 45.0% |
| ACAGCTTAGTGGGAGGAACA+GGG | + | Chr2:22823269-22823288 | MsG0280007912.01.T01:CDS | 50.0% | |
| AGCAGTACGTGAGGAGACTA+AGG | + | Chr2:22823411-22823430 | MsG0280007912.01.T01:CDS | 50.0% | |
| GAGACTAAGGCCAAAGGAAC+TGG | + | Chr2:22823424-22823443 | MsG0280007912.01.T01:CDS | 50.0% | |
| GGGCAGCAGAAATCACCTTT+GGG | - | Chr2:22822443-22822462 | None:intergenic | 50.0% | |
| GTAGAGTTTAGCTGGAGCCA+CGG | - | Chr2:22822388-22822407 | None:intergenic | 50.0% | |
| GTTGAAGGAAATGGAGGACC+CGG | + | Chr2:22822477-22822496 | MsG0280007912.01.T01:CDS | 50.0% | |
| TACAGCTTAGTGGGAGGAAC+AGG | + | Chr2:22823268-22823287 | MsG0280007912.01.T01:CDS | 50.0% | |
| TGGGCAGCAGAAATCACCTT+TGG | - | Chr2:22822444-22822463 | None:intergenic | 50.0% | |
| !! | ATTGTTGCTGGCTCTGATGG+TGG | + | Chr2:22823331-22823350 | MsG0280007912.01.T01:CDS | 50.0% |
| CGTGAGGAGACTAAGGCCAA+AGG | + | Chr2:22823418-22823437 | MsG0280007912.01.T01:CDS | 55.0% | |
| CTTAGTGGGAGGAACAGGGT+TGG | + | Chr2:22823273-22823292 | MsG0280007912.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 22822348 | 22823495 | 22822348 | ID=MsG0280007912.01;Name=MsG0280007912.01 |
| Chr2 | mRNA | 22822348 | 22823495 | 22822348 | ID=MsG0280007912.01.T01;Parent=MsG0280007912.01;Name=MsG0280007912.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|157 |
| Chr2 | exon | 22822348 | 22822528 | 22822348 | ID=MsG0280007912.01.T01:exon:13878;Parent=MsG0280007912.01.T01 |
| Chr2 | exon | 22823203 | 22823495 | 22823203 | ID=MsG0280007912.01.T01:exon:13879;Parent=MsG0280007912.01.T01 |
| Chr2 | CDS | 22822348 | 22822528 | 22822348 | ID=MsG0280007912.01.T01:cds;Parent=MsG0280007912.01.T01 |
| Chr2 | CDS | 22823203 | 22823495 | 22823203 | ID=MsG0280007912.01.T01:cds;Parent=MsG0280007912.01.T01 |
| Gene Sequence |
| Protein sequence |
