Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004300.01.T01 | XP_024636994.1 | 98.23 | 339 | 5 | 1 | 1 | 339 | 1 | 338 | 0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004300.01.T01 | Q9LVB0 | 64.706 | 221 | 60 | 7 | 49 | 259 | 76 | 288 | 3.53E-83 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004300.01.T01 | A0A072VXL7 | 97.654 | 341 | 5 | 2 | 1 | 339 | 1 | 340 | 0.0 | 668 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048035.01 | MsG0180004300.01 | 0.827051 | 1.936258e-54 | 1.848239e-51 |
| MsG0080048302.01 | MsG0180004300.01 | 0.803845 | 2.870330e-49 | 1.457642e-46 |
| MsG0080048692.01 | MsG0180004300.01 | -0.829030 | 6.466228e-55 | 6.538482e-52 |
| MsG0080048754.01 | MsG0180004300.01 | -0.804709 | 1.896869e-49 | 9.848949e-47 |
| MsG0080049076.01 | MsG0180004300.01 | -0.809685 | 1.674610e-50 | 9.897187e-48 |
| MsG0180000479.01 | MsG0180004300.01 | 0.811969 | 5.366874e-51 | 3.369220e-48 |
| MsG0180000729.01 | MsG0180004300.01 | 0.820739 | 5.851156e-53 | 4.668287e-50 |
| MsG0180000798.01 | MsG0180004300.01 | 0.825906 | 3.630139e-54 | 3.353430e-51 |
| MsG0180002439.01 | MsG0180004300.01 | -0.803996 | 2.670240e-49 | 1.361288e-46 |
| MsG0180002912.01 | MsG0180004300.01 | 0.832567 | 8.784320e-56 | 9.856282e-53 |
| MsG0180003948.01 | MsG0180004300.01 | 0.813168 | 2.933488e-51 | 1.901550e-48 |
| MsG0180004060.01 | MsG0180004300.01 | 0.812265 | 4.625522e-51 | 2.927397e-48 |
| MsG0180004186.01 | MsG0180004300.01 | 0.907805 | 3.404999e-81 | 6.138131e-77 |
| MsG0180004300.01 | MsG0180004388.01 | 0.800264 | 1.563902e-48 | 7.249880e-46 |
| MsG0180004300.01 | MsG0180004752.01 | 0.816783 | 4.628207e-52 | 3.310629e-49 |
| MsG0180004300.01 | MsG0180006023.01 | 0.811372 | 7.234381e-51 | 4.470346e-48 |
| MsG0180004300.01 | MsG0180006226.01 | -0.826264 | 2.984021e-54 | 2.784588e-51 |
| MsG0180004300.01 | MsG0180006235.01 | 0.808530 | 2.960463e-50 | 1.696798e-47 |
| MsG0180004300.01 | MsG0280006425.01 | 0.811621 | 6.389099e-51 | 3.973886e-48 |
| MsG0180004300.01 | MsG0280006436.01 | 0.839537 | 1.493832e-57 | 2.069064e-54 |
| MsG0180004300.01 | MsG0280006586.01 | 0.808591 | 2.872748e-50 | 1.649092e-47 |
| MsG0180004300.01 | MsG0280007071.01 | 0.800575 | 1.351428e-48 | 6.314516e-46 |
| MsG0180004300.01 | MsG0280007089.01 | 0.804497 | 2.099824e-49 | 1.084274e-46 |
| MsG0180004300.01 | MsG0280007609.01 | 0.807945 | 3.943654e-50 | 2.225763e-47 |
| MsG0180004300.01 | MsG0280008590.01 | 0.852787 | 3.670278e-61 | 7.757557e-58 |
| MsG0180004300.01 | MsG0280008856.01 | 0.884576 | 1.704544e-71 | 1.130610e-67 |
| MsG0180004300.01 | MsG0280009603.01 | 0.808212 | 3.459707e-50 | 1.966563e-47 |
| MsG0180004300.01 | MsG0280010173.01 | 0.805030 | 1.625276e-49 | 8.508616e-47 |
| MsG0180004300.01 | MsG0280010296.01 | 0.818482 | 1.916036e-52 | 1.435982e-49 |
| MsG0180004300.01 | MsG0280010695.01 | -0.817694 | 2.887913e-52 | 2.117918e-49 |
| MsG0180004300.01 | MsG0280010868.01 | 0.839909 | 1.194892e-57 | 1.674373e-54 |
| MsG0180004300.01 | MsG0380013100.01 | 0.810662 | 1.031339e-50 | 6.254119e-48 |
| MsG0180004300.01 | MsG0380013890.01 | -0.816726 | 4.765537e-52 | 3.403467e-49 |
| MsG0180004300.01 | MsG0380013892.01 | -0.836400 | 9.566511e-57 | 1.204210e-53 |
| MsG0180004300.01 | MsG0380013940.01 | -0.825511 | 4.505322e-54 | 4.114855e-51 |
| MsG0180004300.01 | MsG0380013943.01 | -0.817200 | 3.730123e-52 | 2.698836e-49 |
| MsG0180004300.01 | MsG0380013945.01 | -0.817599 | 3.033088e-52 | 2.218573e-49 |
| MsG0180004300.01 | MsG0380013953.01 | -0.845339 | 4.320511e-59 | 7.177511e-56 |
| MsG0180004300.01 | MsG0380013957.01 | -0.830663 | 2.586616e-55 | 2.743270e-52 |
| MsG0180004300.01 | MsG0380013967.01 | -0.829622 | 4.643999e-55 | 4.778582e-52 |
| MsG0180004300.01 | MsG0380013977.01 | -0.817269 | 3.599148e-52 | 2.608876e-49 |
| MsG0180004300.01 | MsG0380014006.01 | -0.851233 | 1.014174e-60 | 2.039181e-57 |
| MsG0180004300.01 | MsG0380014032.01 | -0.815371 | 9.566467e-52 | 6.583538e-49 |
| MsG0180004300.01 | MsG0380014033.01 | -0.801369 | 9.303874e-49 | 4.435489e-46 |
| MsG0180004300.01 | MsG0380015455.01 | 0.819167 | 1.338691e-52 | 1.022396e-49 |
| MsG0180004300.01 | MsG0380016008.01 | 0.845544 | 3.801322e-59 | 6.356458e-56 |
| MsG0180004300.01 | MsG0380016018.01 | 0.853282 | 2.648810e-61 | 5.693353e-58 |
| MsG0180004300.01 | MsG0380017203.01 | 0.815522 | 8.853701e-52 | 6.118507e-49 |
| MsG0180004300.01 | MsG0380017946.01 | 0.804489 | 2.107456e-49 | 1.088005e-46 |
| MsG0180004300.01 | MsG0380018026.01 | 0.819343 | 1.220456e-52 | 9.365951e-50 |
| MsG0180004300.01 | MsG0480018333.01 | 0.828677 | 7.869536e-55 | 7.876493e-52 |
| MsG0180004300.01 | MsG0480018780.01 | 0.808750 | 2.657069e-50 | 1.531625e-47 |
| MsG0180004300.01 | MsG0480018998.01 | 0.833637 | 4.756472e-56 | 5.510053e-53 |
| MsG0180004300.01 | MsG0480019038.01 | 0.818920 | 1.523888e-52 | 1.156085e-49 |
| MsG0180004300.01 | MsG0480019277.01 | 0.834738 | 2.519755e-56 | 3.016778e-53 |
| MsG0180004300.01 | MsG0480020052.01 | -0.804418 | 2.181340e-49 | 1.124077e-46 |
| MsG0180004300.01 | MsG0480020444.01 | 0.808014 | 3.812717e-50 | 2.155798e-47 |
| MsG0180004300.01 | MsG0480021928.01 | 0.805279 | 1.441338e-49 | 7.594081e-47 |
| MsG0180004300.01 | MsG0480022273.01 | 0.829069 | 6.326119e-55 | 6.404314e-52 |
| MsG0180004300.01 | MsG0480022479.01 | 0.837852 | 4.068952e-57 | 5.353738e-54 |
| MsG0180004300.01 | MsG0480022480.01 | 0.858921 | 5.911268e-63 | 1.533722e-59 |
| MsG0180004300.01 | MsG0480022520.01 | 0.820378 | 7.081712e-53 | 5.594346e-50 |
| MsG0180004300.01 | MsG0480022663.01 | 0.821787 | 3.353468e-53 | 2.755267e-50 |
| MsG0180004300.01 | MsG0480022797.01 | 0.800847 | 1.189292e-48 | 5.595568e-46 |
| MsG0180004300.01 | MsG0480022987.01 | 0.825322 | 4.993006e-54 | 4.536313e-51 |
| MsG0180004300.01 | MsG0480023318.01 | 0.818616 | 1.786579e-52 | 1.343813e-49 |
| MsG0180004300.01 | MsG0480023536.01 | 0.821235 | 4.496835e-53 | 3.637865e-50 |
| MsG0180004300.01 | MsG0480023674.01 | -0.812197 | 4.784768e-51 | 3.022634e-48 |
| MsG0180004300.01 | MsG0580024035.01 | 0.846045 | 2.778644e-59 | 4.722379e-56 |
| MsG0180004300.01 | MsG0580024478.01 | 0.820964 | 5.191457e-53 | 4.168644e-50 |
| MsG0180004300.01 | MsG0580024570.01 | -0.808663 | 2.772354e-50 | 1.594444e-47 |
| MsG0180004300.01 | MsG0580024999.01 | 0.817051 | 4.029688e-52 | 2.903770e-49 |
| MsG0180004300.01 | MsG0580027129.01 | 0.801737 | 7.819943e-49 | 3.762648e-46 |
| MsG0180004300.01 | MsG0580027626.01 | 0.813822 | 2.106955e-51 | 1.390315e-48 |
| MsG0180004300.01 | MsG0580028307.01 | 0.831259 | 1.847154e-55 | 1.993678e-52 |
| MsG0180004300.01 | MsG0580029583.01 | 0.813950 | 1.974316e-51 | 1.307306e-48 |
| MsG0180004300.01 | MsG0580029798.01 | 0.827907 | 1.206842e-54 | 1.181094e-51 |
| MsG0180004300.01 | MsG0580029930.01 | 0.817926 | 2.559896e-52 | 1.889393e-49 |
| MsG0180004300.01 | MsG0580029960.01 | 0.824824 | 6.548075e-54 | 5.865182e-51 |
| MsG0180004300.01 | MsG0680035777.01 | 0.817030 | 4.073784e-52 | 2.933857e-49 |
| MsG0180004300.01 | MsG0680035842.01 | 0.830095 | 3.561528e-55 | 3.715107e-52 |
| MsG0180004300.01 | MsG0780037599.01 | 0.821967 | 3.046496e-53 | 2.515729e-50 |
| MsG0180004300.01 | MsG0780038837.01 | 0.805194 | 1.501963e-49 | 7.896439e-47 |
| MsG0180004300.01 | MsG0780038857.01 | 0.832837 | 7.524789e-56 | 8.511065e-53 |
| MsG0180004300.01 | MsG0780039430.01 | 0.814772 | 1.299673e-51 | 8.799046e-49 |
| MsG0180004300.01 | MsG0780040060.01 | 0.833232 | 6.003911e-56 | 6.871583e-53 |
| MsG0180004300.01 | MsG0780040144.01 | 0.833859 | 4.185851e-56 | 4.882197e-53 |
| MsG0180004300.01 | MsG0780040481.01 | 0.804835 | 1.785396e-49 | 9.300738e-47 |
| MsG0180004300.01 | MsG0780040621.01 | 0.802450 | 5.578180e-49 | 2.733293e-46 |
| MsG0180004300.01 | MsG0780041014.01 | -0.824239 | 8.989674e-54 | 7.917249e-51 |
| MsG0180004300.01 | MsG0780041641.01 | 0.807298 | 5.412029e-50 | 3.003520e-47 |
| MsG0180004300.01 | MsG0780041705.01 | 0.803924 | 2.763551e-49 | 1.406296e-46 |
| MsG0180004300.01 | MsG0880041883.01 | 0.813066 | 3.088624e-51 | 1.996637e-48 |
| MsG0180004300.01 | MsG0880041985.01 | 0.804959 | 1.681975e-49 | 8.790097e-47 |
| MsG0180004300.01 | MsG0880042027.01 | 0.810110 | 1.356297e-50 | 8.105901e-48 |
| MsG0180004300.01 | MsG0880042967.01 | 0.821087 | 4.865839e-53 | 3.920362e-50 |
| MsG0180004300.01 | MsG0880043262.01 | 0.852534 | 4.334554e-61 | 9.084390e-58 |
| MsG0180004300.01 | MsG0880043537.01 | 0.832192 | 1.087757e-55 | 1.206918e-52 |
| MsG0180004300.01 | MsG0880043745.01 | 0.814827 | 1.263434e-51 | 8.566764e-49 |
| MsG0180004300.01 | MsG0880043921.01 | 0.838912 | 2.169485e-57 | 2.947876e-54 |
| MsG0180004300.01 | MsG0880045099.01 | 0.805147 | 1.536104e-49 | 8.066375e-47 |
| MsG0180004300.01 | MsG0880045256.01 | 0.826136 | 3.201597e-54 | 2.976794e-51 |
| MsG0180004300.01 | MsG0880045861.01 | 0.835418 | 1.697472e-56 | 2.074563e-53 |
| MsG0180004300.01 | MsG0880046251.01 | -0.838599 | 2.612782e-57 | 3.517010e-54 |
| MsG0180004300.01 | MsG0880046467.01 | 0.851746 | 7.262248e-61 | 1.484509e-57 |
| MsG0180004300.01 | MsG0880046615.01 | 0.839666 | 1.382337e-57 | 1.922291e-54 |
| MsG0180004300.01 | MsG0880046669.01 | 0.812924 | 3.318674e-51 | 2.137163e-48 |
| MsG0180004300.01 | MsG0880046753.01 | 0.835881 | 1.295903e-56 | 1.605906e-53 |
| MsG0180004300.01 | MsG0880046779.01 | 0.811604 | 6.443992e-51 | 4.006094e-48 |
| MsG0180004300.01 | MsG0880047233.01 | 0.804806 | 1.810447e-49 | 9.424234e-47 |
| MsG0180004300.01 | MsG0880047423.01 | 0.805652 | 1.203965e-49 | 6.404766e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004300.01.T01 | MTR_1g076710 | 97.654 | 341 | 5 | 2 | 1 | 339 | 1 | 340 | 0.0 | 668 |
| MsG0180004300.01.T01 | MTR_6g061670 | 53.372 | 341 | 113 | 13 | 1 | 324 | 1 | 312 | 3.42e-90 | 273 |
| MsG0180004300.01.T01 | MTR_6g061670 | 53.509 | 342 | 116 | 13 | 1 | 324 | 1 | 317 | 8.57e-90 | 272 |
| MsG0180004300.01.T01 | MTR_7g074935 | 54.417 | 283 | 99 | 7 | 1 | 270 | 1 | 266 | 1.51e-75 | 236 |
| MsG0180004300.01.T01 | MTR_4g101990 | 46.243 | 346 | 125 | 9 | 17 | 335 | 17 | 328 | 5.03e-64 | 206 |
| MsG0180004300.01.T01 | MTR_8g036160 | 43.807 | 331 | 119 | 8 | 1 | 289 | 1 | 306 | 2.89e-60 | 197 |
| MsG0180004300.01.T01 | MTR_1g061530 | 39.806 | 309 | 147 | 10 | 49 | 339 | 65 | 352 | 6.60e-51 | 173 |
| MsG0180004300.01.T01 | MTR_5g011680 | 42.199 | 282 | 122 | 9 | 14 | 262 | 3 | 276 | 4.17e-46 | 159 |
| MsG0180004300.01.T01 | MTR_8g031100 | 42.745 | 255 | 121 | 8 | 49 | 300 | 89 | 321 | 5.70e-44 | 154 |
| MsG0180004300.01.T01 | MTR_5g010330 | 44.196 | 224 | 103 | 7 | 37 | 259 | 59 | 261 | 6.79e-43 | 151 |
| MsG0180004300.01.T01 | MTR_7g077120 | 41.810 | 232 | 115 | 4 | 48 | 276 | 88 | 302 | 6.81e-43 | 152 |
| MsG0180004300.01.T01 | MTR_6g060670 | 42.922 | 219 | 95 | 5 | 46 | 264 | 117 | 305 | 3.13e-40 | 144 |
| MsG0180004300.01.T01 | MTR_5g011620 | 42.085 | 259 | 120 | 8 | 14 | 262 | 3 | 241 | 1.48e-38 | 145 |
| MsG0180004300.01.T01 | MTR_8g098390 | 39.381 | 226 | 121 | 4 | 48 | 272 | 96 | 306 | 1.93e-36 | 135 |
| MsG0180004300.01.T01 | MTR_4g098460 | 55.000 | 120 | 52 | 2 | 129 | 247 | 78 | 196 | 2.83e-31 | 119 |
| MsG0180004300.01.T01 | MTR_5g011610 | 49.342 | 152 | 65 | 4 | 130 | 275 | 51 | 196 | 4.43e-31 | 120 |
| MsG0180004300.01.T01 | MTR_5g011610 | 53.465 | 101 | 43 | 2 | 124 | 223 | 204 | 301 | 4.57e-21 | 92.4 |
| MsG0180004300.01.T01 | MTR_4g055803 | 41.346 | 208 | 90 | 7 | 48 | 246 | 59 | 243 | 4.95e-30 | 119 |
| MsG0180004300.01.T01 | MTR_4g055833 | 39.706 | 204 | 99 | 5 | 48 | 246 | 56 | 240 | 1.46e-29 | 116 |
| MsG0180004300.01.T01 | MTR_4g098460 | 52.800 | 125 | 52 | 3 | 129 | 247 | 78 | 201 | 5.22e-29 | 113 |
| MsG0180004300.01.T01 | MTR_1g038960 | 40.099 | 202 | 98 | 5 | 47 | 246 | 83 | 263 | 9.88e-28 | 111 |
| MsG0180004300.01.T01 | MTR_1g079780 | 50.427 | 117 | 53 | 3 | 132 | 246 | 109 | 222 | 1.36e-27 | 110 |
| MsG0180004300.01.T01 | MTR_7g116320 | 53.719 | 121 | 52 | 2 | 128 | 247 | 139 | 256 | 1.42e-27 | 111 |
| MsG0180004300.01.T01 | MTR_4g055813 | 53.509 | 114 | 49 | 2 | 135 | 246 | 22 | 133 | 5.63e-27 | 108 |
| MsG0180004300.01.T01 | MTR_5g014360 | 38.235 | 204 | 94 | 7 | 52 | 246 | 123 | 303 | 1.15e-25 | 106 |
| MsG0180004300.01.T01 | MTR_7g116320 | 52.991 | 117 | 51 | 2 | 128 | 243 | 139 | 252 | 1.59e-25 | 103 |
| MsG0180004300.01.T01 | MTR_3g100470 | 41.463 | 123 | 69 | 3 | 132 | 251 | 101 | 223 | 1.09e-23 | 99.4 |
| MsG0180004300.01.T01 | MTR_4g055705 | 42.188 | 128 | 70 | 2 | 122 | 245 | 127 | 254 | 2.41e-20 | 90.1 |
| MsG0180004300.01.T01 | MTR_5g013390 | 33.486 | 218 | 117 | 7 | 47 | 258 | 79 | 274 | 4.26e-20 | 90.1 |
| MsG0180004300.01.T01 | MTR_1g038990 | 35.149 | 202 | 91 | 7 | 47 | 246 | 80 | 243 | 1.06e-19 | 88.6 |
| MsG0180004300.01.T01 | MTR_5g091630 | 39.459 | 185 | 86 | 7 | 69 | 247 | 23 | 187 | 1.20e-18 | 84.3 |
| MsG0180004300.01.T01 | MTR_5g041430 | 36.364 | 198 | 99 | 7 | 48 | 242 | 49 | 222 | 2.55e-18 | 84.7 |
| MsG0180004300.01.T01 | MTR_3g116100 | 36.571 | 175 | 97 | 5 | 89 | 253 | 91 | 261 | 8.06e-18 | 83.6 |
| MsG0180004300.01.T01 | MTR_3g068035 | 43.966 | 116 | 61 | 2 | 132 | 246 | 106 | 218 | 1.27e-17 | 82.4 |
| MsG0180004300.01.T01 | MTR_5g066020 | 36.552 | 145 | 83 | 6 | 124 | 261 | 72 | 214 | 2.02e-17 | 80.9 |
| MsG0180004300.01.T01 | MTR_3g023560 | 38.843 | 121 | 67 | 2 | 130 | 246 | 60 | 177 | 3.72e-17 | 80.5 |
| MsG0180004300.01.T01 | MTR_5g011700 | 45.283 | 106 | 53 | 2 | 143 | 246 | 10 | 112 | 1.11e-16 | 77.8 |
| MsG0180004300.01.T01 | MTR_5g011520 | 38.750 | 160 | 80 | 4 | 88 | 246 | 97 | 239 | 3.03e-16 | 79.0 |
| MsG0180004300.01.T01 | MTR_7g080980 | 46.610 | 118 | 55 | 3 | 132 | 246 | 84 | 196 | 3.25e-16 | 77.8 |
| MsG0180004300.01.T01 | MTR_8g036060 | 38.217 | 157 | 79 | 4 | 91 | 246 | 86 | 225 | 1.02e-15 | 77.0 |
| MsG0180004300.01.T01 | MTR_4g098450 | 44.068 | 118 | 58 | 3 | 132 | 246 | 103 | 215 | 1.14e-15 | 76.6 |
| MsG0180004300.01.T01 | MTR_1g044155 | 40.171 | 117 | 66 | 2 | 131 | 246 | 152 | 265 | 1.29e-15 | 77.4 |
| MsG0180004300.01.T01 | MTR_5g080580 | 42.241 | 116 | 63 | 2 | 132 | 246 | 116 | 228 | 1.14e-14 | 74.3 |
| MsG0180004300.01.T01 | MTR_1g073860 | 38.793 | 116 | 67 | 2 | 132 | 246 | 121 | 233 | 7.77e-14 | 71.6 |
| MsG0180004300.01.T01 | MTR_1g079810 | 40.517 | 116 | 65 | 2 | 132 | 246 | 101 | 213 | 3.05e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004300.01.T01 | AT5G62260 | 64.706 | 221 | 60 | 7 | 49 | 259 | 76 | 288 | 3.60e-84 | 260 |
| MsG0180004300.01.T01 | AT5G62260 | 64.706 | 221 | 60 | 7 | 49 | 259 | 76 | 288 | 3.60e-84 | 260 |
| MsG0180004300.01.T01 | AT4G25320 | 67.143 | 210 | 61 | 4 | 48 | 254 | 85 | 289 | 4.19e-84 | 260 |
| MsG0180004300.01.T01 | AT5G62260 | 62.326 | 215 | 63 | 7 | 49 | 253 | 76 | 282 | 1.50e-77 | 239 |
| MsG0180004300.01.T01 | AT4G12080 | 58.974 | 234 | 72 | 7 | 48 | 269 | 88 | 309 | 4.94e-76 | 238 |
| MsG0180004300.01.T01 | AT5G51590 | 59.091 | 242 | 64 | 5 | 34 | 249 | 64 | 296 | 2.27e-72 | 230 |
| MsG0180004300.01.T01 | AT4G22770 | 56.682 | 217 | 78 | 5 | 48 | 258 | 71 | 277 | 3.67e-59 | 194 |
| MsG0180004300.01.T01 | AT4G22770 | 56.682 | 217 | 78 | 5 | 48 | 258 | 71 | 277 | 3.67e-59 | 194 |
| MsG0180004300.01.T01 | AT4G00200 | 53.846 | 260 | 92 | 8 | 15 | 263 | 14 | 256 | 1.22e-55 | 184 |
| MsG0180004300.01.T01 | AT4G00200 | 53.846 | 260 | 92 | 8 | 15 | 263 | 14 | 256 | 1.22e-55 | 184 |
| MsG0180004300.01.T01 | AT2G33620 | 53.465 | 202 | 76 | 5 | 48 | 248 | 96 | 280 | 1.42e-52 | 177 |
| MsG0180004300.01.T01 | AT2G33620 | 53.465 | 202 | 76 | 5 | 48 | 248 | 96 | 280 | 1.42e-52 | 177 |
| MsG0180004300.01.T01 | AT2G33620 | 53.465 | 202 | 76 | 5 | 48 | 248 | 96 | 280 | 1.42e-52 | 177 |
| MsG0180004300.01.T01 | AT2G33620 | 53.465 | 202 | 76 | 5 | 48 | 248 | 96 | 280 | 1.42e-52 | 177 |
| MsG0180004300.01.T01 | AT2G45850 | 38.163 | 283 | 148 | 5 | 7 | 286 | 56 | 314 | 1.16e-45 | 159 |
| MsG0180004300.01.T01 | AT2G45850 | 38.163 | 283 | 148 | 5 | 7 | 286 | 56 | 314 | 1.16e-45 | 159 |
| MsG0180004300.01.T01 | AT1G63470 | 46.377 | 207 | 90 | 5 | 48 | 249 | 104 | 294 | 2.14e-44 | 156 |
| MsG0180004300.01.T01 | AT2G45850 | 40.336 | 238 | 118 | 4 | 7 | 241 | 56 | 272 | 5.29e-41 | 145 |
| MsG0180004300.01.T01 | AT4G17950 | 39.921 | 253 | 131 | 6 | 48 | 290 | 130 | 371 | 6.22e-40 | 146 |
| MsG0180004300.01.T01 | AT3G61310 | 46.829 | 205 | 86 | 6 | 45 | 247 | 97 | 280 | 1.27e-39 | 143 |
| MsG0180004300.01.T01 | AT5G46640 | 43.981 | 216 | 91 | 5 | 45 | 247 | 98 | 296 | 2.44e-37 | 138 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 92 | 283 | 2.57e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 92 | 283 | 2.57e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 92 | 283 | 2.57e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 92 | 283 | 2.57e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 92 | 283 | 2.57e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 98 | 289 | 2.98e-35 | 132 |
| MsG0180004300.01.T01 | AT1G63480 | 38.991 | 218 | 103 | 6 | 48 | 261 | 98 | 289 | 2.98e-35 | 132 |
| MsG0180004300.01.T01 | AT3G04590 | 38.667 | 225 | 110 | 5 | 30 | 246 | 79 | 283 | 7.19e-33 | 124 |
| MsG0180004300.01.T01 | AT3G04590 | 38.667 | 225 | 110 | 5 | 30 | 246 | 79 | 283 | 2.88e-32 | 125 |
| MsG0180004300.01.T01 | AT2G36560 | 42.963 | 135 | 71 | 4 | 129 | 260 | 102 | 233 | 1.66e-23 | 101 |
| MsG0180004300.01.T01 | AT5G49700 | 38.519 | 135 | 77 | 4 | 132 | 260 | 83 | 217 | 1.04e-20 | 90.9 |
| MsG0180004300.01.T01 | AT2G42940 | 38.857 | 175 | 80 | 7 | 76 | 247 | 43 | 193 | 1.20e-18 | 84.7 |
| MsG0180004300.01.T01 | AT3G60870 | 40.517 | 116 | 63 | 3 | 132 | 246 | 86 | 196 | 3.24e-17 | 80.9 |
| MsG0180004300.01.T01 | AT1G14490 | 36.806 | 144 | 84 | 5 | 124 | 260 | 22 | 165 | 4.22e-17 | 79.3 |
| MsG0180004300.01.T01 | AT1G14490 | 37.931 | 145 | 81 | 6 | 124 | 260 | 41 | 184 | 5.24e-17 | 79.3 |
| MsG0180004300.01.T01 | AT4G14465 | 43.103 | 116 | 62 | 2 | 132 | 246 | 94 | 206 | 4.47e-16 | 77.8 |
| MsG0180004300.01.T01 | AT2G35270 | 40.000 | 160 | 72 | 6 | 91 | 246 | 78 | 217 | 1.12e-15 | 76.6 |
| MsG0180004300.01.T01 | AT3G55560 | 41.026 | 117 | 66 | 2 | 132 | 247 | 115 | 229 | 1.53e-14 | 73.6 |
| MsG0180004300.01.T01 | AT1G76500 | 35.200 | 125 | 68 | 3 | 132 | 246 | 99 | 220 | 1.23e-13 | 70.9 |
| MsG0180004300.01.T01 | AT4G17800 | 41.228 | 114 | 63 | 2 | 134 | 246 | 111 | 221 | 1.48e-13 | 70.5 |
| MsG0180004300.01.T01 | AT3G04570 | 38.710 | 124 | 64 | 3 | 132 | 246 | 107 | 227 | 2.29e-12 | 67.4 |
| MsG0180004300.01.T01 | AT5G28590 | 37.398 | 123 | 46 | 3 | 128 | 246 | 26 | 121 | 2.79e-12 | 65.9 |
| MsG0180004300.01.T01 | AT4G22810 | 34.783 | 161 | 82 | 6 | 91 | 246 | 105 | 247 | 7.40e-12 | 65.9 |
| MsG0180004300.01.T01 | AT4G12050 | 40.171 | 117 | 65 | 3 | 132 | 246 | 145 | 258 | 7.93e-12 | 65.9 |
| MsG0180004300.01.T01 | AT2G45430 | 36.025 | 161 | 81 | 5 | 91 | 246 | 89 | 232 | 1.07e-11 | 65.5 |
| MsG0180004300.01.T01 | AT4G35390 | 41.176 | 119 | 62 | 4 | 132 | 246 | 90 | 204 | 1.51e-11 | 64.7 |
Find 109 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTACCACAGAAATTT+TGG | 0.113361 | 1:-76287633 | None:intergenic |
| TTAAGCTAAATTTAGAATTT+TGG | 0.127303 | 1:+76287941 | MsG0180004300.01.T01:five_prime_UTR |
| ACTGTTCCAATTCAATTTCT+AGG | 0.268350 | 1:+76287728 | MsG0180004300.01.T01:five_prime_UTR |
| ATGGAAGAAAGAGAGAATTT+TGG | 0.289936 | 1:+76287995 | MsG0180004300.01.T01:CDS |
| CTTCGTCAATCGACTTCTTC+AGG | 0.300773 | 1:+76290310 | MsG0180004300.01.T01:CDS |
| AATTCTATTCTCTATATATA+TGG | 0.303409 | 1:+76291391 | MsG0180004300.01.T01:three_prime_UTR |
| CCACCCAATACTCGGCCATC+TGG | 0.308208 | 1:-76290719 | None:intergenic |
| TCCATTCTCAGTTGGCATAA+AGG | 0.318075 | 1:-76290651 | None:intergenic |
| AGGGGAAGACCAAGGAAGTA+TGG | 0.321600 | 1:+76288148 | MsG0180004300.01.T01:CDS |
| AACGGTGCCGGTGTCGTTGC+CGG | 0.338330 | 1:+76288105 | MsG0180004300.01.T01:CDS |
| GGCCCAGATGGCCGAGTATT+GGG | 0.346491 | 1:+76290716 | MsG0180004300.01.T01:CDS |
| TAACTTCAGAAAACAGAGTT+TGG | 0.347759 | 1:-76287827 | None:intergenic |
| TTTGAGATTCTTTCCTTGTC+TGG | 0.357599 | 1:+76290626 | MsG0180004300.01.T01:CDS |
| AATGCAGCAGGTGTCATAAA+AGG | 0.358990 | 1:-76291028 | None:intergenic |
| TATGTGCTTACAGTGAATTC+TGG | 0.363275 | 1:+76290069 | MsG0180004300.01.T01:CDS |
| TCCTTTATGCCAACTGAGAA+TGG | 0.367271 | 1:+76290650 | MsG0180004300.01.T01:CDS |
| TGAAGACCTAGAAATTGAAT+TGG | 0.368969 | 1:-76287734 | None:intergenic |
| AGGCCCAGATGGCCGAGTAT+TGG | 0.385737 | 1:+76290715 | MsG0180004300.01.T01:CDS |
| TAAGAAAATAATACAAACTT+TGG | 0.400872 | 1:-76287592 | None:intergenic |
| CTTGTAATTCCATTCTCAGT+TGG | 0.403549 | 1:-76290659 | None:intergenic |
| CCATCTGGCCCATACTTCCT+TGG | 0.404209 | 1:-76288157 | None:intergenic |
| TCAAGTTATTCTGTTGTGAA+TGG | 0.409214 | 1:+76291462 | MsG0180004300.01.T01:three_prime_UTR |
| GAGAGTTCTCAGCTTGGAAA+AGG | 0.409824 | 1:+76288248 | MsG0180004300.01.T01:CDS |
| GTCTCTTTGGCAGGCCCAGA+TGG | 0.410023 | 1:+76290704 | MsG0180004300.01.T01:CDS |
| TGGTGGGATGAGCGTCTCTT+TGG | 0.413721 | 1:+76290691 | MsG0180004300.01.T01:CDS |
| GAAAACGTTTGAATCTTCAA+TGG | 0.416459 | 1:+76287911 | MsG0180004300.01.T01:five_prime_UTR |
| GAAAGCGCAGTCACAGCTCC+AGG | 0.416976 | 1:-76288190 | None:intergenic |
| GCTGGTTTGCTTATAGCTTC+CGG | 0.419761 | 1:+76290749 | MsG0180004300.01.T01:CDS |
| CAGAGATCCTTTACCTGAAA+AGG | 0.423451 | 1:+76291123 | MsG0180004300.01.T01:CDS |
| TCCAAGTTGTTATCAATCCT+TGG | 0.429223 | 1:-76288070 | None:intergenic |
| TTCTTCTTCAAAGCTGTCTC+CGG | 0.437794 | 1:-76288124 | None:intergenic |
| GTTTAGTGTTAGATGTTAGT+TGG | 0.439419 | 1:+76291262 | MsG0180004300.01.T01:three_prime_UTR |
| AACGGAATCGACGATGAAAT+CGG | 0.441018 | 1:-76288220 | None:intergenic |
| GATTTCTTCATAGATTCAAC+AGG | 0.446009 | 1:-76288283 | None:intergenic |
| TGCATTCGTTAGGTCGTTGT+GGG | 0.447335 | 1:+76290863 | MsG0180004300.01.T01:intron |
| TTCGTCAATCGACTTCTTCA+GGG | 0.447507 | 1:+76290311 | MsG0180004300.01.T01:CDS |
| GGGATGAGCGTCTCTTTGGC+AGG | 0.450220 | 1:+76290695 | MsG0180004300.01.T01:CDS |
| ATGCTATAATTAAGTGTGAT+TGG | 0.454428 | 1:+76291414 | MsG0180004300.01.T01:three_prime_UTR |
| GGAATTACAAGAAGCAGATC+TGG | 0.463594 | 1:+76290671 | MsG0180004300.01.T01:CDS |
| CCAGGAGCAGGCTTACCATC+TGG | 0.464856 | 1:-76288172 | None:intergenic |
| CCAGATGGTAAGCCTGCTCC+TGG | 0.466966 | 1:+76288172 | MsG0180004300.01.T01:CDS |
| CACCCAATACTCGGCCATCT+GGG | 0.474541 | 1:-76290718 | None:intergenic |
| AAAACGTTTGAATCTTCAAT+GGG | 0.476944 | 1:+76287912 | MsG0180004300.01.T01:five_prime_UTR |
| GCAGTCACAGCTCCAGGAGC+AGG | 0.477303 | 1:-76288184 | None:intergenic |
| GTGTCTAATGAAGTAAGTTT+TGG | 0.480216 | 1:+76290995 | MsG0180004300.01.T01:CDS |
| GTATTGGGTGGTGGACTCGC+TGG | 0.482204 | 1:+76290731 | MsG0180004300.01.T01:CDS |
| GTTTGAATCTTCAATGGGTA+GGG | 0.483701 | 1:+76287917 | MsG0180004300.01.T01:five_prime_UTR |
| TATTGCACGTGATCCTTGTT+GGG | 0.485487 | 1:-76290248 | None:intergenic |
| CGACACCGGCACCGTTGCCA+TGG | 0.488569 | 1:-76288098 | None:intergenic |
| TCATCGTCGATTCCGTTGAC+TGG | 0.493414 | 1:+76288226 | MsG0180004300.01.T01:CDS |
| CGTTTGAATCTTCAATGGGT+AGG | 0.496496 | 1:+76287916 | MsG0180004300.01.T01:five_prime_UTR |
| TCATTGTAGCAAATAGATGT+AGG | 0.498893 | 1:+76291336 | MsG0180004300.01.T01:three_prime_UTR |
| TTTGGTGCTGTGAATGTAGT+GGG | 0.499641 | 1:+76288013 | MsG0180004300.01.T01:CDS |
| CGAGTCCACCACCCAATACT+CGG | 0.505760 | 1:-76290727 | None:intergenic |
| TCTTCTTGATGAAATGCAGC+AGG | 0.509824 | 1:-76291040 | None:intergenic |
| ACAACAATGCTCAAGACTCT+AGG | 0.534120 | 1:+76291080 | MsG0180004300.01.T01:CDS |
| AGAGTTCTCAGCTTGGAAAA+GGG | 0.534719 | 1:+76288249 | MsG0180004300.01.T01:CDS |
| TAAATAATACCTTGCAAAGG+TGG | 0.536712 | 1:-76288331 | None:intergenic |
| ATATTGCACGTGATCCTTGT+TGG | 0.537010 | 1:-76290249 | None:intergenic |
| TATAGCTTCCGGTCCCGTGC+AGG | 0.538508 | 1:+76290760 | MsG0180004300.01.T01:CDS |
| ATATGCATTCTCTCTGCCAC+TGG | 0.540565 | 1:+76290268 | MsG0180004300.01.T01:CDS |
| ATCTCTGTCATCAGCAGATG+AGG | 0.549628 | 1:-76291107 | None:intergenic |
| GATGGCCGAGTATTGGGTGG+TGG | 0.550417 | 1:+76290722 | MsG0180004300.01.T01:CDS |
| TCAGCTTGGAAAAGGGGTAG+AGG | 0.552867 | 1:+76288256 | MsG0180004300.01.T01:CDS |
| GAGTTCTCAGCTTGGAAAAG+GGG | 0.553297 | 1:+76288250 | MsG0180004300.01.T01:CDS |
| CCAAGGAAGTATGGGCCAGA+TGG | 0.554974 | 1:+76288157 | MsG0180004300.01.T01:CDS |
| TCCAAGGATTGATAACAACT+TGG | 0.557972 | 1:+76288069 | MsG0180004300.01.T01:CDS |
| GTGCATTCGTTAGGTCGTTG+TGG | 0.559944 | 1:+76290862 | MsG0180004300.01.T01:intron |
| AGACAACCACAATTCTGTCC+TGG | 0.562239 | 1:-76291221 | None:intergenic |
| GCTGTCTCCGGCAACGACAC+CGG | 0.564357 | 1:-76288112 | None:intergenic |
| GGGGAAGACCAAGGAAGTAT+GGG | 0.568941 | 1:+76288149 | MsG0180004300.01.T01:CDS |
| AGACAGCTTTGAAGAAGAAG+AGG | 0.569402 | 1:+76288128 | MsG0180004300.01.T01:CDS |
| TGAGCTTTCAAGCTGCTCCA+AGG | 0.570496 | 1:+76288053 | MsG0180004300.01.T01:CDS |
| GACAGCTTTGAAGAAGAAGA+GGG | 0.570605 | 1:+76288129 | MsG0180004300.01.T01:CDS |
| AAACAGCAAGAAGCAGAAGG+TGG | 0.571737 | 1:+76290916 | MsG0180004300.01.T01:CDS |
| AAGCACATAAGCTGTGAAGT+TGG | 0.573504 | 1:-76290055 | None:intergenic |
| GAGGGAATTGCATACTCAGT+AGG | 0.575333 | 1:+76290030 | MsG0180004300.01.T01:CDS |
| CATTGTAGCAAATAGATGTA+GGG | 0.575767 | 1:+76291337 | MsG0180004300.01.T01:three_prime_UTR |
| GTAGGTGGAGGTGTAAGTGA+GGG | 0.576701 | 1:+76290012 | MsG0180004300.01.T01:intron |
| AACTTACCAGGACAGAATTG+TGG | 0.576879 | 1:+76291215 | MsG0180004300.01.T01:three_prime_UTR |
| TTTGAAAGTCCACCTTTGCA+AGG | 0.582707 | 1:+76288322 | MsG0180004300.01.T01:CDS |
| TGTAGGTGGAGGTGTAAGTG+AGG | 0.583447 | 1:+76290011 | MsG0180004300.01.T01:intron |
| TGATGATTAACATGTGGAGG+AGG | 0.584845 | 1:-76290971 | None:intergenic |
| GCTGTCAAAATTAACTTACC+AGG | 0.589328 | 1:+76291203 | MsG0180004300.01.T01:three_prime_UTR |
| CAGCTTGGAAAAGGGGTAGA+GGG | 0.590560 | 1:+76288257 | MsG0180004300.01.T01:CDS |
| GCTGAGAACTCTCCAGTCAA+CGG | 0.597272 | 1:-76288238 | None:intergenic |
| GGAGCAGCTTGAAAGCTCAC+AGG | 0.597686 | 1:-76288049 | None:intergenic |
| GAATGTAGTGGGTGGTAATG+AGG | 0.604474 | 1:+76288024 | MsG0180004300.01.T01:CDS |
| TGGCATAAAGGAACCAGACA+AGG | 0.611075 | 1:-76290639 | None:intergenic |
| TCGTCAATCGACTTCTTCAG+GGG | 0.612115 | 1:+76290312 | MsG0180004300.01.T01:CDS |
| AAAATTATGTCCTCCCAACA+AGG | 0.612526 | 1:+76290235 | MsG0180004300.01.T01:CDS |
| TGACTGGAGAGTTCTCAGCT+TGG | 0.612765 | 1:+76288242 | MsG0180004300.01.T01:CDS |
| GCAAAACAGCAAGAAGCAGA+AGG | 0.616072 | 1:+76290913 | MsG0180004300.01.T01:CDS |
| TGCACGTGATCCTTGTTGGG+AGG | 0.616462 | 1:-76290245 | None:intergenic |
| ATTACAAGAAGCAGATCTGG+TGG | 0.630094 | 1:+76290674 | MsG0180004300.01.T01:CDS |
| AACATTTGAAATTGTGCCAG+TGG | 0.637698 | 1:-76290284 | None:intergenic |
| ACATGATGATTAACATGTGG+AGG | 0.639570 | 1:-76290974 | None:intergenic |
| CCAGATGGCCGAGTATTGGG+TGG | 0.641351 | 1:+76290719 | MsG0180004300.01.T01:CDS |
| CTATAAATAATACCTTGCAA+AGG | 0.642043 | 1:-76288334 | None:intergenic |
| GACACATGATGATTAACATG+TGG | 0.651610 | 1:-76290977 | None:intergenic |
| GGTGCTGTGAATGTAGTGGG+TGG | 0.656148 | 1:+76288016 | MsG0180004300.01.T01:CDS |
| ATCGACGATGAAATCGGCAT+AGG | 0.666533 | 1:-76288214 | None:intergenic |
| TTACAAGAAGCAGATCTGGT+GGG | 0.675023 | 1:+76290675 | MsG0180004300.01.T01:CDS |
| AGAAGAAGAGGGGAAGACCA+AGG | 0.680559 | 1:+76288140 | MsG0180004300.01.T01:CDS |
| GCTTACAGTGAATTCTGGCG+AGG | 0.694276 | 1:+76290074 | MsG0180004300.01.T01:CDS |
| ACAGCTTTGAAGAAGAAGAG+GGG | 0.698390 | 1:+76288130 | MsG0180004300.01.T01:CDS |
| CGTCAATCGACTTCTTCAGG+GGG | 0.699414 | 1:+76290313 | MsG0180004300.01.T01:CDS |
| AGAGAATAGAATTCTTAACA+AGG | 0.710713 | 1:-76291381 | None:intergenic |
| GAGATGAACAAACAACCACG+TGG | 0.770003 | 1:-76291297 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTTATATTTAAT+GGG | + | Chr1:76289843-76289862 | MsG0180004300.01.T01:intron | 0.0% |
| !!! | TATTTTATTTTTATATTTAA+TGG | + | Chr1:76289842-76289861 | MsG0180004300.01.T01:intron | 0.0% |
| !!! | AAAAATGAATTTTTTTCAAA+AGG | - | Chr1:76287862-76287881 | None:intergenic | 10.0% |
| !!! | AAAATGAATTTTTTTCAAAA+GGG | - | Chr1:76287861-76287880 | None:intergenic | 10.0% |
| !! | AATTCTATTCTCTATATATA+TGG | + | Chr1:76291391-76291410 | MsG0180004300.01.T01:three_prime_UTR | 15.0% |
| !! | ACCATATAAAATATGATAAA+AGG | - | Chr1:76290114-76290133 | None:intergenic | 15.0% |
| !! | ACGAAAATTATAAGAAAAAA+AGG | - | Chr1:76288418-76288437 | None:intergenic | 15.0% |
| !! | ATAAAATATGATAAAAGGAA+AGG | - | Chr1:76290109-76290128 | None:intergenic | 15.0% |
| !! | ATTAAGAACAAGTTAAAATT+TGG | - | Chr1:76289077-76289096 | None:intergenic | 15.0% |
| !! | TAAGAAAATAATACAAACTT+TGG | - | Chr1:76287595-76287614 | None:intergenic | 15.0% |
| !!! | AAATGAATTTTTTTCAAAAG+GGG | - | Chr1:76287860-76287879 | None:intergenic | 15.0% |
| !!! | TAAAGAATCTTCTAAAATTA+GGG | + | Chr1:76289545-76289564 | MsG0180004300.01.T01:intron | 15.0% |
| !!! | TAAGCTAAATTTAGAATTTT+GGG | + | Chr1:76287942-76287961 | MsG0180004300.01.T01:five_prime_UTR | 15.0% |
| !!! | TAGTTTTTGAATTTCATTTT+TGG | + | Chr1:76290150-76290169 | MsG0180004300.01.T01:intron | 15.0% |
| !!! | TCCTTTTATCATATTTTATA+TGG | + | Chr1:76290110-76290129 | MsG0180004300.01.T01:intron | 15.0% |
| !!! | TTAAGCTAAATTTAGAATTT+TGG | + | Chr1:76287941-76287960 | MsG0180004300.01.T01:five_prime_UTR | 15.0% |
| !!! | TTATCATATTTTATATGGTA+TGG | + | Chr1:76290115-76290134 | MsG0180004300.01.T01:intron | 15.0% |
| !!! | TTTATTTTTGTGAACTATAA+AGG | + | Chr1:76289900-76289919 | MsG0180004300.01.T01:intron | 15.0% |
| !! | AACTACATAAAATACGTATA+AGG | - | Chr1:76289992-76290011 | None:intergenic | 20.0% |
| !! | TATGTTGAAAAAATAACAAG+AGG | - | Chr1:76288564-76288583 | None:intergenic | 20.0% |
| !! | TCTTCTTATAAAGGAAAATA+AGG | - | Chr1:76288845-76288864 | None:intergenic | 20.0% |
| !! | TGTGATAGAGTTTATATTTA+GGG | + | Chr1:76288691-76288710 | MsG0180004300.01.T01:intron | 20.0% |
| !! | TTGTGATAGAGTTTATATTT+AGG | + | Chr1:76288690-76288709 | MsG0180004300.01.T01:intron | 20.0% |
| !!! | AAGCTAAATTTAGAATTTTG+GGG | + | Chr1:76287943-76287962 | MsG0180004300.01.T01:five_prime_UTR | 20.0% |
| !!! | AATTTTTTCCAAAATTTCTG+TGG | + | Chr1:76287625-76287644 | MsG0180004300.01.T01:five_prime_UTR | 20.0% |
| !!! | CATTTTTTTGTCTTAATCAT+CGG | - | Chr1:76289135-76289154 | None:intergenic | 20.0% |
| !!! | CTTTTATATAATGAATGAAC+TGG | + | Chr1:76289869-76289888 | MsG0180004300.01.T01:intron | 20.0% |
| !!! | GTAAAGAATCTTCTAAAATT+AGG | + | Chr1:76289544-76289563 | MsG0180004300.01.T01:intron | 20.0% |
| !!! | TACTTTTCTTCTTCTTATAA+AGG | - | Chr1:76288854-76288873 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTTGCATAAAAA+TGG | + | Chr1:76287976-76287995 | MsG0180004300.01.T01:exon | 20.0% |
| !!! | TTTTAACTTGTTCTTAATCA+TGG | + | Chr1:76289079-76289098 | MsG0180004300.01.T01:intron | 20.0% |
| !!! | TTTTTGAGTTCTAATTGTTA+TGG | + | Chr1:76288614-76288633 | MsG0180004300.01.T01:intron | 20.0% |
| ! | AAAACGTTTGAATCTTCAAT+GGG | + | Chr1:76287912-76287931 | MsG0180004300.01.T01:five_prime_UTR | 25.0% |
| ! | AAATGGTTAGAGTAAATGAA+GGG | + | Chr1:76288893-76288912 | MsG0180004300.01.T01:intron | 25.0% |
| ! | AGAGAATAGAATTCTTAACA+AGG | - | Chr1:76291384-76291403 | None:intergenic | 25.0% |
| ! | AGAGATTTATAGAACGTATT+AGG | + | Chr1:76289292-76289311 | MsG0180004300.01.T01:intron | 25.0% |
| ! | AGTATTGCATTATATGACAA+TGG | + | Chr1:76288870-76288889 | MsG0180004300.01.T01:intron | 25.0% |
| ! | AGTGGAATTCATTATTATTC+AGG | + | Chr1:76288502-76288521 | MsG0180004300.01.T01:intron | 25.0% |
| ! | ATGCTATAATTAAGTGTGAT+TGG | + | Chr1:76291414-76291433 | MsG0180004300.01.T01:three_prime_UTR | 25.0% |
| ! | ATTAAATACATGAATTGAGC+TGG | + | Chr1:76289637-76289656 | MsG0180004300.01.T01:intron | 25.0% |
| ! | CTATAAATAATACCTTGCAA+AGG | - | Chr1:76288337-76288356 | None:intergenic | 25.0% |
| ! | GAGATTTATAGAACGTATTA+GGG | + | Chr1:76289293-76289312 | MsG0180004300.01.T01:intron | 25.0% |
| ! | GGTTCTTTAATTGTTTAAGA+GGG | + | Chr1:76289314-76289333 | MsG0180004300.01.T01:intron | 25.0% |
| ! | GTGATAGAGTTTATATTTAG+GGG | + | Chr1:76288692-76288711 | MsG0180004300.01.T01:intron | 25.0% |
| ! | TCTTCTTGTAAAAAATAGAG+TGG | + | Chr1:76289158-76289177 | MsG0180004300.01.T01:intron | 25.0% |
| ! | TGATAGAGTTTATATTTAGG+GGG | + | Chr1:76288693-76288712 | MsG0180004300.01.T01:intron | 25.0% |
| ! | TTTCTATTATTGAAGTCTCT+TGG | + | Chr1:76289729-76289748 | MsG0180004300.01.T01:intron | 25.0% |
| !! | CATTTGTTTCTCTATCATAT+TGG | + | Chr1:76290397-76290416 | MsG0180004300.01.T01:intron | 25.0% |
| !! | GTAATAAAGAAATTCTAGAG+AGG | - | Chr1:76289931-76289950 | None:intergenic | 25.0% |
| !! | TACGTATTTTATGTAGTTGT+AGG | + | Chr1:76289994-76290013 | MsG0180004300.01.T01:intron | 25.0% |
| !! | TGAAATTACCACAGAAATTT+TGG | - | Chr1:76287636-76287655 | None:intergenic | 25.0% |
| !!! | AATTTTTTGTGTTCTTGCAA+TGG | + | Chr1:76287657-76287676 | MsG0180004300.01.T01:five_prime_UTR | 25.0% |
| !!! | TGCATCAGTATTTTAATCAA+AGG | + | Chr1:76289199-76289218 | MsG0180004300.01.T01:intron | 25.0% |
| !!! | TTTTGGTTGCATATAGTATA+AGG | + | Chr1:76289256-76289275 | MsG0180004300.01.T01:intron | 25.0% |
| AACAATACATGGCAGTAAAT+TGG | - | Chr1:76289585-76289604 | None:intergenic | 30.0% | |
| AACACAATTGTTTATGGACT+CGG | + | Chr1:76289392-76289411 | MsG0180004300.01.T01:intron | 30.0% | |
| ACTATTAGACTCATTCTAGT+TGG | - | Chr1:76288920-76288939 | None:intergenic | 30.0% | |
| ACTGTTCCAATTCAATTTCT+AGG | + | Chr1:76287728-76287747 | MsG0180004300.01.T01:five_prime_UTR | 30.0% | |
| AGGTTGTATTTGTTCTGTTT+AGG | + | Chr1:76288804-76288823 | MsG0180004300.01.T01:intron | 30.0% | |
| ATTATTAAGAGCAATCTCCT+AGG | + | Chr1:76289106-76289125 | MsG0180004300.01.T01:intron | 30.0% | |
| ATTATTCAAACCAACCAACA+AGG | - | Chr1:76289019-76289038 | None:intergenic | 30.0% | |
| CAATTGTGTTCCATACTTTA+CGG | - | Chr1:76289382-76289401 | None:intergenic | 30.0% | |
| CATATAAACGAAGGACTTTA+TGG | - | Chr1:76290431-76290450 | None:intergenic | 30.0% | |
| CATATAATACAAGACAGACA+TGG | - | Chr1:76290457-76290476 | None:intergenic | 30.0% | |
| CATATAGTATAAGGTATGCT+TGG | + | Chr1:76289265-76289284 | MsG0180004300.01.T01:intron | 30.0% | |
| CATTGTAGCAAATAGATGTA+GGG | + | Chr1:76291337-76291356 | MsG0180004300.01.T01:three_prime_UTR | 30.0% | |
| CTAAAATTAGGGCCATAATA+GGG | + | Chr1:76289556-76289575 | MsG0180004300.01.T01:intron | 30.0% | |
| CTTTAATTGTTTAAGAGGGT+TGG | + | Chr1:76289318-76289337 | MsG0180004300.01.T01:intron | 30.0% | |
| CTTTGTATTCAGATCTGAAA+AGG | - | Chr1:76288747-76288766 | None:intergenic | 30.0% | |
| GAAAACGTTTGAATCTTCAA+TGG | + | Chr1:76287911-76287930 | MsG0180004300.01.T01:five_prime_UTR | 30.0% | |
| GAAATGGTTAGAGTAAATGA+AGG | + | Chr1:76288892-76288911 | MsG0180004300.01.T01:intron | 30.0% | |
| GAAGAAGCTTATGTATCATT+CGG | - | Chr1:76289808-76289827 | None:intergenic | 30.0% | |
| GATTTCTTCATAGATTCAAC+AGG | - | Chr1:76288286-76288305 | None:intergenic | 30.0% | |
| GCATTATATGACAATGGAAA+TGG | + | Chr1:76288876-76288895 | MsG0180004300.01.T01:intron | 30.0% | |
| GGAGTTAAGACTTTCAAATA+TGG | + | Chr1:76289658-76289677 | MsG0180004300.01.T01:intron | 30.0% | |
| GGGTTCTTTAATTGTTTAAG+AGG | + | Chr1:76289313-76289332 | MsG0180004300.01.T01:intron | 30.0% | |
| GGTTGTATTTGTTCTGTTTA+GGG | + | Chr1:76288805-76288824 | MsG0180004300.01.T01:intron | 30.0% | |
| GTATAAGGAAGATCAATTGA+TGG | - | Chr1:76289977-76289996 | None:intergenic | 30.0% | |
| GTATGGAACACAATTGTTTA+TGG | + | Chr1:76289386-76289405 | MsG0180004300.01.T01:intron | 30.0% | |
| GTTTAGTGTTAGATGTTAGT+TGG | + | Chr1:76291262-76291281 | MsG0180004300.01.T01:three_prime_UTR | 30.0% | |
| TAAATAATACCTTGCAAAGG+TGG | - | Chr1:76288334-76288353 | None:intergenic | 30.0% | |
| TAAATGCTAAAATGAGCATG+TGG | - | Chr1:76290180-76290199 | None:intergenic | 30.0% | |
| TAACTTCAGAAAACAGAGTT+TGG | - | Chr1:76287830-76287849 | None:intergenic | 30.0% | |
| TCAAGTTATTCTGTTGTGAA+TGG | + | Chr1:76291462-76291481 | MsG0180004300.01.T01:three_prime_UTR | 30.0% | |
| TCATTGTAGCAAATAGATGT+AGG | + | Chr1:76291336-76291355 | MsG0180004300.01.T01:three_prime_UTR | 30.0% | |
| TGAAGACCTAGAAATTGAAT+TGG | - | Chr1:76287737-76287756 | None:intergenic | 30.0% | |
| TGAATAATAGGCTGCAAAAT+AGG | + | Chr1:76289031-76289050 | MsG0180004300.01.T01:intron | 30.0% | |
| TTCAATTTCATTTATGCCCT+TGG | + | Chr1:76290582-76290601 | MsG0180004300.01.T01:intron | 30.0% | |
| TTTATATGGTATGGATCAAG+TGG | + | Chr1:76290124-76290143 | MsG0180004300.01.T01:intron | 30.0% | |
| ! | AAGTTTGCAGAAGAGATTTT+TGG | + | Chr1:76289239-76289258 | MsG0180004300.01.T01:intron | 30.0% |
| ! | ATGGAAGAAAGAGAGAATTT+TGG | + | Chr1:76287995-76288014 | MsG0180004300.01.T01:CDS | 30.0% |
| ! | GTATTTTATGTAGTTGTAGG+TGG | + | Chr1:76289997-76290016 | MsG0180004300.01.T01:intron | 30.0% |
| ! | GTGTCTAATGAAGTAAGTTT+TGG | + | Chr1:76290995-76291014 | MsG0180004300.01.T01:CDS | 30.0% |
| ! | TAACAACTTGGATTTTTCCA+TGG | + | Chr1:76288081-76288100 | MsG0180004300.01.T01:CDS | 30.0% |
| ! | TCTAAAATTAGGGCCATAAT+AGG | + | Chr1:76289555-76289574 | MsG0180004300.01.T01:intron | 30.0% |
| ! | TGACTGTTACTATGTTTCTA+AGG | + | Chr1:76288438-76288457 | MsG0180004300.01.T01:intron | 30.0% |
| ! | TTGAGTTCTAATTGTTATGG+AGG | + | Chr1:76288617-76288636 | MsG0180004300.01.T01:intron | 30.0% |
| !! | GTCTTTGAGGTTATGAATTA+AGG | + | Chr1:76289347-76289366 | MsG0180004300.01.T01:intron | 30.0% |
| !! | TATTTTTGTGGTTGAAAGTG+AGG | + | Chr1:76288784-76288803 | MsG0180004300.01.T01:intron | 30.0% |
| !! | TCTAATGAAGTAAGTTTTGG+TGG | + | Chr1:76290998-76291017 | MsG0180004300.01.T01:CDS | 30.0% |
| !! | TGTTGGTTGGTTTGAATAAT+AGG | + | Chr1:76289019-76289038 | MsG0180004300.01.T01:intron | 30.0% |
| !!! | AATTTTGAGTTTCCCTTCTA+TGG | + | Chr1:76290515-76290534 | MsG0180004300.01.T01:intron | 30.0% |
| AAAATTATGTCCTCCCAACA+AGG | + | Chr1:76290235-76290254 | MsG0180004300.01.T01:CDS | 35.0% | |
| AAAGGATGAGGTAGATTTGA+AGG | - | Chr1:76289770-76289789 | None:intergenic | 35.0% | |
| AATAGAGTGGTCTCTTAGAA+TGG | + | Chr1:76289171-76289190 | MsG0180004300.01.T01:intron | 35.0% | |
| ACATGATGATTAACATGTGG+AGG | - | Chr1:76290977-76290996 | None:intergenic | 35.0% | |
| AGAGTTTATATTTAGGGGGT+GGG | + | Chr1:76288697-76288716 | MsG0180004300.01.T01:intron | 35.0% | |
| AGATCTGAATACAAAGTGTG+AGG | + | Chr1:76288751-76288770 | MsG0180004300.01.T01:intron | 35.0% | |
| ATCAATTGATGGAGAAAGAC+AGG | - | Chr1:76289966-76289985 | None:intergenic | 35.0% | |
| CATCTTACTAATCACCTTGT+TGG | + | Chr1:76289002-76289021 | MsG0180004300.01.T01:intron | 35.0% | |
| CTTGTAATTCCATTCTCAGT+TGG | - | Chr1:76290662-76290681 | None:intergenic | 35.0% | |
| GACACATGATGATTAACATG+TGG | - | Chr1:76290980-76290999 | None:intergenic | 35.0% | |
| GCTGTCAAAATTAACTTACC+AGG | + | Chr1:76291203-76291222 | MsG0180004300.01.T01:three_prime_UTR | 35.0% | |
| GTTTGAATCTTCAATGGGTA+GGG | + | Chr1:76287917-76287936 | MsG0180004300.01.T01:five_prime_UTR | 35.0% | |
| TAGAGTTTATATTTAGGGGG+TGG | + | Chr1:76288696-76288715 | MsG0180004300.01.T01:intron | 35.0% | |
| TATGTGCTTACAGTGAATTC+TGG | + | Chr1:76290069-76290088 | MsG0180004300.01.T01:CDS | 35.0% | |
| TCACTAACTCCATACTGAAT+CGG | + | Chr1:76290545-76290564 | MsG0180004300.01.T01:intron | 35.0% | |
| TCCAAGTTGTTATCAATCCT+TGG | - | Chr1:76288073-76288092 | None:intergenic | 35.0% | |
| TGAAAAGGAATCTCAGCTAA+GGG | - | Chr1:76288732-76288751 | None:intergenic | 35.0% | |
| TTACTAATCACCTTGTTGGT+TGG | + | Chr1:76289006-76289025 | MsG0180004300.01.T01:intron | 35.0% | |
| ! | AACATTTGAAATTGTGCCAG+TGG | - | Chr1:76290287-76290306 | None:intergenic | 35.0% |
| ! | CTACCTCATCCTTTAAAAGA+TGG | + | Chr1:76289776-76289795 | MsG0180004300.01.T01:intron | 35.0% |
| ! | CTATGATTAGAGTCCTTTTC+AGG | - | Chr1:76291139-76291158 | None:intergenic | 35.0% |
| ! | TCACAATACTGCGATTTTCT+CGG | + | Chr1:76287693-76287712 | MsG0180004300.01.T01:five_prime_UTR | 35.0% |
| ! | TCCAAGGATTGATAACAACT+TGG | + | Chr1:76288069-76288088 | MsG0180004300.01.T01:CDS | 35.0% |
| ! | TTGGGAGGACATAATTTTCA+TGG | - | Chr1:76290233-76290252 | None:intergenic | 35.0% |
| ! | TTTGAGATTCTTTCCTTGTC+TGG | + | Chr1:76290626-76290645 | MsG0180004300.01.T01:CDS | 35.0% |
| ! | TTTTATGTAGTTGTAGGTGG+AGG | + | Chr1:76290000-76290019 | MsG0180004300.01.T01:intron | 35.0% |
| !! | CAGTTTTTGAGAAATGAGAG+TGG | + | Chr1:76288484-76288503 | MsG0180004300.01.T01:intron | 35.0% |
| !! | GATCCATCTTTTAAAGGATG+AGG | - | Chr1:76289782-76289801 | None:intergenic | 35.0% |
| !! | TATGTAACACCGATTCAGTA+TGG | - | Chr1:76290557-76290576 | None:intergenic | 35.0% |
| !!! | TTAGAGTCCTTTTCAGGTAA+AGG | - | Chr1:76291133-76291152 | None:intergenic | 35.0% |
| AAATTAGGGCCATAATAGGG+TGG | + | Chr1:76289559-76289578 | MsG0180004300.01.T01:intron | 40.0% | |
| AACGGAATCGACGATGAAAT+CGG | - | Chr1:76288223-76288242 | None:intergenic | 40.0% | |
| AACTTACCAGGACAGAATTG+TGG | + | Chr1:76291215-76291234 | MsG0180004300.01.T01:three_prime_UTR | 40.0% | |
| AAGCACATAAGCTGTGAAGT+TGG | - | Chr1:76290058-76290077 | None:intergenic | 40.0% | |
| ACAACAATGCTCAAGACTCT+AGG | + | Chr1:76291080-76291099 | MsG0180004300.01.T01:CDS | 40.0% | |
| ACATGGCTGCATATAAACGA+AGG | - | Chr1:76290440-76290459 | None:intergenic | 40.0% | |
| AGAGTTCTCAGCTTGGAAAA+GGG | + | Chr1:76288249-76288268 | MsG0180004300.01.T01:CDS | 40.0% | |
| AGTTTATATTTAGGGGGTGG+GGG | + | Chr1:76288699-76288718 | MsG0180004300.01.T01:intron | 40.0% | |
| ATATTGCACGTGATCCTTGT+TGG | - | Chr1:76290252-76290271 | None:intergenic | 40.0% | |
| ATGCACAACATAGTGAGTGT+TGG | - | Chr1:76290848-76290867 | None:intergenic | 40.0% | |
| ATGTATTGTTGCGATGTGTG+AGG | + | Chr1:76289595-76289614 | MsG0180004300.01.T01:intron | 40.0% | |
| ATTACAAGAAGCAGATCTGG+TGG | + | Chr1:76290674-76290693 | MsG0180004300.01.T01:CDS | 40.0% | |
| CACTATGTTGTGCATTCGTT+AGG | + | Chr1:76290853-76290872 | MsG0180004300.01.T01:intron | 40.0% | |
| CAGAGATCCTTTACCTGAAA+AGG | + | Chr1:76291123-76291142 | MsG0180004300.01.T01:CDS | 40.0% | |
| CCTGTAATTCCATTCACCAA+GGG | - | Chr1:76290601-76290620 | None:intergenic | 40.0% | |
| CCTTGGTGAATGGAATTACA+GGG | + | Chr1:76290599-76290618 | MsG0180004300.01.T01:intron | 40.0% | |
| CGTTTGAATCTTCAATGGGT+AGG | + | Chr1:76287916-76287935 | MsG0180004300.01.T01:five_prime_UTR | 40.0% | |
| CTGAAAAGGAATCTCAGCTA+AGG | - | Chr1:76288733-76288752 | None:intergenic | 40.0% | |
| CTGCACTATGTCATAGTATG+TGG | + | Chr1:76289441-76289460 | MsG0180004300.01.T01:intron | 40.0% | |
| CTTGGTGAATGGAATTACAG+GGG | + | Chr1:76290600-76290619 | MsG0180004300.01.T01:intron | 40.0% | |
| GACTACACAATGTTGATCCA+GGG | + | Chr1:76289519-76289538 | MsG0180004300.01.T01:intron | 40.0% | |
| GAGTTTATATTTAGGGGGTG+GGG | + | Chr1:76288698-76288717 | MsG0180004300.01.T01:intron | 40.0% | |
| GGAATTACAAGAAGCAGATC+TGG | + | Chr1:76290671-76290690 | MsG0180004300.01.T01:CDS | 40.0% | |
| GTAAATTGGCCACCCTATTA+TGG | - | Chr1:76289571-76289590 | None:intergenic | 40.0% | |
| GTCTTAATCATCGGATTCCT+AGG | - | Chr1:76289126-76289145 | None:intergenic | 40.0% | |
| TAGAAGATTCTTTACTGCCC+TGG | - | Chr1:76289539-76289558 | None:intergenic | 40.0% | |
| TATTGCACGTGATCCTTGTT+GGG | - | Chr1:76290251-76290270 | None:intergenic | 40.0% | |
| TCACACATCGCAACAATACA+TGG | - | Chr1:76289596-76289615 | None:intergenic | 40.0% | |
| TCATTTATGCCCTTGGTGAA+TGG | + | Chr1:76290589-76290608 | MsG0180004300.01.T01:intron | 40.0% | |
| TCCATACTTTACGGCTTTCT+AGG | - | Chr1:76289373-76289392 | None:intergenic | 40.0% | |
| TCCATTCTCAGTTGGCATAA+AGG | - | Chr1:76290654-76290673 | None:intergenic | 40.0% | |
| TCCTTTATGCCAACTGAGAA+TGG | + | Chr1:76290650-76290669 | MsG0180004300.01.T01:CDS | 40.0% | |
| TCTGAATACAAAGTGTGAGG+TGG | + | Chr1:76288754-76288773 | MsG0180004300.01.T01:intron | 40.0% | |
| TCTTCTTGATGAAATGCAGC+AGG | - | Chr1:76291043-76291062 | None:intergenic | 40.0% | |
| TGACTACACAATGTTGATCC+AGG | + | Chr1:76289518-76289537 | MsG0180004300.01.T01:intron | 40.0% | |
| TGATGATTAACATGTGGAGG+AGG | - | Chr1:76290974-76290993 | None:intergenic | 40.0% | |
| TTACAAGAAGCAGATCTGGT+GGG | + | Chr1:76290675-76290694 | MsG0180004300.01.T01:CDS | 40.0% | |
| TTCTTCTTCAAAGCTGTCTC+CGG | - | Chr1:76288127-76288146 | None:intergenic | 40.0% | |
| TTTGAAAGTCCACCTTTGCA+AGG | + | Chr1:76288322-76288341 | MsG0180004300.01.T01:CDS | 40.0% | |
| ! | AATGCAGCAGGTGTCATAAA+AGG | - | Chr1:76291031-76291050 | None:intergenic | 40.0% |
| ! | AGTGAGTCGATTCCATAGAA+GGG | - | Chr1:76290530-76290549 | None:intergenic | 40.0% |
| ! | CGGTCAGATCCATCTTTTAA+AGG | - | Chr1:76289788-76289807 | None:intergenic | 40.0% |
| ! | CTTGGATTTTTCCATGGCAA+CGG | + | Chr1:76288087-76288106 | MsG0180004300.01.T01:CDS | 40.0% |
| ! | GATTTTCTATGCTCTGTCTC+AGG | + | Chr1:76290201-76290220 | MsG0180004300.01.T01:intron | 40.0% |
| ! | TAGTGAGTCGATTCCATAGA+AGG | - | Chr1:76290531-76290550 | None:intergenic | 40.0% |
| ! | TGTTTATGGACTCGGTTATG+TGG | + | Chr1:76289400-76289419 | MsG0180004300.01.T01:intron | 40.0% |
| ! | TTCGTCAATCGACTTCTTCA+GGG | + | Chr1:76290311-76290330 | MsG0180004300.01.T01:CDS | 40.0% |
| !! | ACAGCTTTGAAGAAGAAGAG+GGG | + | Chr1:76288130-76288149 | MsG0180004300.01.T01:CDS | 40.0% |
| !! | AGACAGCTTTGAAGAAGAAG+AGG | + | Chr1:76288128-76288147 | MsG0180004300.01.T01:CDS | 40.0% |
| !! | GACAGCTTTGAAGAAGAAGA+GGG | + | Chr1:76288129-76288148 | MsG0180004300.01.T01:CDS | 40.0% |
| !! | GGTGGATGTGGATATTTTTG+TGG | + | Chr1:76288772-76288791 | MsG0180004300.01.T01:intron | 40.0% |
| !! | TTTGGTGCTGTGAATGTAGT+GGG | + | Chr1:76288013-76288032 | MsG0180004300.01.T01:CDS | 40.0% |
| !!! | TGGTTTGTTAGTTTTCCACG+TGG | + | Chr1:76291282-76291301 | MsG0180004300.01.T01:three_prime_UTR | 40.0% |
| !!! | TTTTGGTGCTGTGAATGTAG+TGG | + | Chr1:76288012-76288031 | MsG0180004300.01.T01:CDS | 40.0% |
| AAACAGCAAGAAGCAGAAGG+TGG | + | Chr1:76290916-76290935 | MsG0180004300.01.T01:CDS | 45.0% | |
| AGACAACCACAATTCTGTCC+TGG | - | Chr1:76291224-76291243 | None:intergenic | 45.0% | |
| ATATGCATTCTCTCTGCCAC+TGG | + | Chr1:76290268-76290287 | MsG0180004300.01.T01:CDS | 45.0% | |
| ATCGACGATGAAATCGGCAT+AGG | - | Chr1:76288217-76288236 | None:intergenic | 45.0% | |
| ATCTCTGTCATCAGCAGATG+AGG | - | Chr1:76291110-76291129 | None:intergenic | 45.0% | |
| CCCTGTAATTCCATTCACCA+AGG | - | Chr1:76290602-76290621 | None:intergenic | 45.0% | |
| CCCTTGGTGAATGGAATTAC+AGG | + | Chr1:76290598-76290617 | MsG0180004300.01.T01:intron | 45.0% | |
| GAGAGTTCTCAGCTTGGAAA+AGG | + | Chr1:76288248-76288267 | MsG0180004300.01.T01:CDS | 45.0% | |
| GAGATGAACAAACAACCACG+TGG | - | Chr1:76291300-76291319 | None:intergenic | 45.0% | |
| GAGGGAATTGCATACTCAGT+AGG | + | Chr1:76290030-76290049 | MsG0180004300.01.T01:CDS | 45.0% | |
| GAGTTCTCAGCTTGGAAAAG+GGG | + | Chr1:76288250-76288269 | MsG0180004300.01.T01:CDS | 45.0% | |
| GCAAAACAGCAAGAAGCAGA+AGG | + | Chr1:76290913-76290932 | MsG0180004300.01.T01:CDS | 45.0% | |
| GCCTAGAAAGCCGTAAAGTA+TGG | + | Chr1:76289369-76289388 | MsG0180004300.01.T01:intron | 45.0% | |
| GTTTATATTTAGGGGGTGGG+GGG | + | Chr1:76288700-76288719 | MsG0180004300.01.T01:intron | 45.0% | |
| TACAAAGTGTGAGGTGGATG+TGG | + | Chr1:76288760-76288779 | MsG0180004300.01.T01:intron | 45.0% | |
| TGCATTCGTTAGGTCGTTGT+GGG | + | Chr1:76290863-76290882 | MsG0180004300.01.T01:intron | 45.0% | |
| TGGCATAAAGGAACCAGACA+AGG | - | Chr1:76290642-76290661 | None:intergenic | 45.0% | |
| ! | ACTCCAGAGTTTTACCTGCA+CGG | - | Chr1:76290777-76290796 | None:intergenic | 45.0% |
| ! | CTTCGTCAATCGACTTCTTC+AGG | + | Chr1:76290310-76290329 | MsG0180004300.01.T01:CDS | 45.0% |
| ! | GCTAGTTTGTCGTGTAGAAC+TGG | + | Chr1:76288944-76288963 | MsG0180004300.01.T01:intron | 45.0% |
| ! | GTTGTGGGAAGTTTTCTTCC+TGG | + | Chr1:76290878-76290897 | MsG0180004300.01.T01:CDS | 45.0% |
| ! | TCGTCAATCGACTTCTTCAG+GGG | + | Chr1:76290312-76290331 | MsG0180004300.01.T01:CDS | 45.0% |
| ! | TTTTCTTCCTGGTCACCATC+TGG | + | Chr1:76290889-76290908 | MsG0180004300.01.T01:CDS | 45.0% |
| !! | AGGGGGTACTTTAACGTATG+AGG | + | Chr1:76290330-76290349 | MsG0180004300.01.T01:CDS | 45.0% |
| !! | GAATGTAGTGGGTGGTAATG+AGG | + | Chr1:76288024-76288043 | MsG0180004300.01.T01:CDS | 45.0% |
| !! | GCTGGTTTGCTTATAGCTTC+CGG | + | Chr1:76290749-76290768 | MsG0180004300.01.T01:CDS | 45.0% |
| !! | TGCAGGTAAAACTCTGGAGT+AGG | + | Chr1:76290777-76290796 | MsG0180004300.01.T01:intron | 45.0% |
| !!! | TCTTGCTGTTTTGCTCCAGA+TGG | - | Chr1:76290907-76290926 | None:intergenic | 45.0% |
| AGAAGAAGAGGGGAAGACCA+AGG | + | Chr1:76288140-76288159 | MsG0180004300.01.T01:CDS | 50.0% | |
| AGGGGAAGACCAAGGAAGTA+TGG | + | Chr1:76288148-76288167 | MsG0180004300.01.T01:CDS | 50.0% | |
| CAGCTTGGAAAAGGGGTAGA+GGG | + | Chr1:76288257-76288276 | MsG0180004300.01.T01:CDS | 50.0% | |
| GCTGAGAACTCTCCAGTCAA+CGG | - | Chr1:76288241-76288260 | None:intergenic | 50.0% | |
| GCTTACAGTGAATTCTGGCG+AGG | + | Chr1:76290074-76290093 | MsG0180004300.01.T01:CDS | 50.0% | |
| GGTGAATGGAATTACAGGGG+CGG | + | Chr1:76290603-76290622 | MsG0180004300.01.T01:intron | 50.0% | |
| GTGCATTCGTTAGGTCGTTG+TGG | + | Chr1:76290862-76290881 | MsG0180004300.01.T01:intron | 50.0% | |
| TCAGCTTGGAAAAGGGGTAG+AGG | + | Chr1:76288256-76288275 | MsG0180004300.01.T01:CDS | 50.0% | |
| TGACTGGAGAGTTCTCAGCT+TGG | + | Chr1:76288242-76288261 | MsG0180004300.01.T01:CDS | 50.0% | |
| TGAGCTTTCAAGCTGCTCCA+AGG | + | Chr1:76288053-76288072 | MsG0180004300.01.T01:CDS | 50.0% | |
| ! | CGTCAATCGACTTCTTCAGG+GGG | + | Chr1:76290313-76290332 | MsG0180004300.01.T01:CDS | 50.0% |
| ! | CTCCAGAGTTTTACCTGCAC+GGG | - | Chr1:76290776-76290795 | None:intergenic | 50.0% |
| ! | GGGGAAGACCAAGGAAGTAT+GGG | + | Chr1:76288149-76288168 | MsG0180004300.01.T01:CDS | 50.0% |
| ! | GTAGGTGGAGGTGTAAGTGA+GGG | + | Chr1:76290012-76290031 | MsG0180004300.01.T01:intron | 50.0% |
| ! | TGTAGGTGGAGGTGTAAGTG+AGG | + | Chr1:76290011-76290030 | MsG0180004300.01.T01:intron | 50.0% |
| ! | TTTTGCTCCAGATGGTGACC+AGG | - | Chr1:76290899-76290918 | None:intergenic | 50.0% |
| ! | TTTTTCCATGGCAACGGTGC+CGG | + | Chr1:76288093-76288112 | MsG0180004300.01.T01:CDS | 50.0% |
| !! | TCATCGTCGATTCCGTTGAC+TGG | + | Chr1:76288226-76288245 | MsG0180004300.01.T01:CDS | 50.0% |
| CACCCAATACTCGGCCATCT+GGG | - | Chr1:76290721-76290740 | None:intergenic | 55.0% | |
| CCATCTGGCCCATACTTCCT+TGG | - | Chr1:76288160-76288179 | None:intergenic | 55.0% | |
| CGAGTCCACCACCCAATACT+CGG | - | Chr1:76290730-76290749 | None:intergenic | 55.0% | |
| GGAGCAGCTTGAAAGCTCAC+AGG | - | Chr1:76288052-76288071 | None:intergenic | 55.0% | |
| GTCCCGTGCAGGTAAAACTC+TGG | + | Chr1:76290771-76290790 | MsG0180004300.01.T01:intron | 55.0% | |
| TGCACGTGATCCTTGTTGGG+AGG | - | Chr1:76290248-76290267 | None:intergenic | 55.0% | |
| TGGTGGGATGAGCGTCTCTT+TGG | + | Chr1:76290691-76290710 | MsG0180004300.01.T01:CDS | 55.0% | |
| ! | CCAAGGAAGTATGGGCCAGA+TGG | + | Chr1:76288157-76288176 | MsG0180004300.01.T01:CDS | 55.0% |
| ! | GAGTTTTACCTGCACGGGAC+CGG | - | Chr1:76290771-76290790 | None:intergenic | 55.0% |
| ! | GGGTTGGCACTCTGTCTTTG+AGG | + | Chr1:76289334-76289353 | MsG0180004300.01.T01:intron | 55.0% |
| ! | GGTGCTGTGAATGTAGTGGG+TGG | + | Chr1:76288016-76288035 | MsG0180004300.01.T01:CDS | 55.0% |
| AGGCCCAGATGGCCGAGTAT+TGG | + | Chr1:76290715-76290734 | MsG0180004300.01.T01:CDS | 60.0% | |
| CCACCCAATACTCGGCCATC+TGG | - | Chr1:76290722-76290741 | None:intergenic | 60.0% | |
| CCAGATGGTAAGCCTGCTCC+TGG | + | Chr1:76288172-76288191 | MsG0180004300.01.T01:CDS | 60.0% | |
| CCAGGAGCAGGCTTACCATC+TGG | - | Chr1:76288175-76288194 | None:intergenic | 60.0% | |
| GGCCCAGATGGCCGAGTATT+GGG | + | Chr1:76290716-76290735 | MsG0180004300.01.T01:CDS | 60.0% | |
| GGGATGAGCGTCTCTTTGGC+AGG | + | Chr1:76290695-76290714 | MsG0180004300.01.T01:CDS | 60.0% | |
| GTCTCTTTGGCAGGCCCAGA+TGG | + | Chr1:76290704-76290723 | MsG0180004300.01.T01:CDS | 60.0% | |
| TATAGCTTCCGGTCCCGTGC+AGG | + | Chr1:76290760-76290779 | MsG0180004300.01.T01:CDS | 60.0% | |
| TATTTAGGGGGTGGGGGGAG+TGG | + | Chr1:76288705-76288724 | MsG0180004300.01.T01:intron | 60.0% | |
| ! | GAAAGCGCAGTCACAGCTCC+AGG | - | Chr1:76288193-76288212 | None:intergenic | 60.0% |
| !! | CCAGATGGCCGAGTATTGGG+TGG | + | Chr1:76290719-76290738 | MsG0180004300.01.T01:CDS | 60.0% |
| !! | GATGGCCGAGTATTGGGTGG+TGG | + | Chr1:76290722-76290741 | MsG0180004300.01.T01:CDS | 60.0% |
| !! | GTATTGGGTGGTGGACTCGC+TGG | + | Chr1:76290731-76290750 | MsG0180004300.01.T01:CDS | 60.0% |
| GCAGTCACAGCTCCAGGAGC+AGG | - | Chr1:76288187-76288206 | None:intergenic | 65.0% | |
| GCTGTCTCCGGCAACGACAC+CGG | - | Chr1:76288115-76288134 | None:intergenic | 65.0% | |
| !! | AACGGTGCCGGTGTCGTTGC+CGG | + | Chr1:76288105-76288124 | MsG0180004300.01.T01:CDS | 65.0% |
| CGACACCGGCACCGTTGCCA+TGG | - | Chr1:76288101-76288120 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 76287573 | 76291508 | 76287573 | ID=MsG0180004300.01;Name=MsG0180004300.01 |
| Chr1 | mRNA | 76287573 | 76291508 | 76287573 | ID=MsG0180004300.01.T01;Parent=MsG0180004300.01;Name=MsG0180004300.01.T01;_AED=0.47;_eAED=0.47;_QI=422|0.75|0.8|1|1|1|5|334|339 |
| Chr1 | exon | 76287573 | 76288343 | 76287573 | ID=MsG0180004300.01.T01:exon:14759;Parent=MsG0180004300.01.T01 |
| Chr1 | exon | 76290016 | 76290095 | 76290016 | ID=MsG0180004300.01.T01:exon:14760;Parent=MsG0180004300.01.T01 |
| Chr1 | exon | 76290223 | 76290351 | 76290223 | ID=MsG0180004300.01.T01:exon:14761;Parent=MsG0180004300.01.T01 |
| Chr1 | exon | 76290620 | 76290781 | 76290620 | ID=MsG0180004300.01.T01:exon:14762;Parent=MsG0180004300.01.T01 |
| Chr1 | exon | 76290875 | 76291508 | 76290875 | ID=MsG0180004300.01.T01:exon:14763;Parent=MsG0180004300.01.T01 |
| Chr1 | five_prime_UTR | 76287573 | 76287994 | 76287573 | ID=MsG0180004300.01.T01:five_prime_utr;Parent=MsG0180004300.01.T01 |
| Chr1 | CDS | 76287995 | 76288343 | 76287995 | ID=MsG0180004300.01.T01:cds;Parent=MsG0180004300.01.T01 |
| Chr1 | CDS | 76290016 | 76290095 | 76290016 | ID=MsG0180004300.01.T01:cds;Parent=MsG0180004300.01.T01 |
| Chr1 | CDS | 76290223 | 76290351 | 76290223 | ID=MsG0180004300.01.T01:cds;Parent=MsG0180004300.01.T01 |
| Chr1 | CDS | 76290620 | 76290781 | 76290620 | ID=MsG0180004300.01.T01:cds;Parent=MsG0180004300.01.T01 |
| Chr1 | CDS | 76290875 | 76291174 | 76290875 | ID=MsG0180004300.01.T01:cds;Parent=MsG0180004300.01.T01 |
| Chr1 | three_prime_UTR | 76291175 | 76291508 | 76291175 | ID=MsG0180004300.01.T01:three_prime_utr;Parent=MsG0180004300.01.T01 |
| Gene Sequence |
| Protein sequence |
