AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019588.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019588.01.T01 MTR_4g035310 91.864 295 1 2 1 295 1 272 0.0 523
MsG0480019588.01.T01 MTR_4g035310 99.231 260 1 1 1 260 1 259 0.0 509
MsG0480019588.01.T01 MTR_8g024520 47.692 260 100 12 5 259 14 242 3.73e-59 190
MsG0480019588.01.T01 MTR_8g024520 47.692 260 100 12 5 259 14 242 3.96e-59 190
MsG0480019588.01.T01 MTR_3g116130 52.703 222 83 6 6 223 19 222 3.18e-58 188
MsG0480019588.01.T01 MTR_3g116130 52.703 222 83 6 6 223 19 222 3.44e-57 188
MsG0480019588.01.T01 MTR_5g064120 76.471 85 20 0 9 93 9 93 5.59e-44 151
MsG0480019588.01.T01 MTR_3g092490 46.111 180 74 4 6 182 16 175 6.13e-42 145
MsG0480019588.01.T01 MTR_3g092490 46.409 181 71 5 6 182 16 174 9.25e-42 144
MsG0480019588.01.T01 MTR_3g092490 61.062 113 35 3 11 117 21 130 1.04e-41 142
MsG0480019588.01.T01 MTR_7g117495 68.539 89 28 0 9 97 11 99 1.46e-40 142
MsG0480019588.01.T01 MTR_7g117495 68.539 89 28 0 9 97 11 99 1.57e-40 142
MsG0480019588.01.T01 MTR_3g055990 46.667 75 39 1 17 91 7 80 2.75e-19 87.8
MsG0480019588.01.T01 MTR_3g055990 46.667 75 39 1 17 91 7 80 2.83e-19 87.8
MsG0480019588.01.T01 MTR_4g088010 50.602 83 41 0 12 94 72 154 3.07e-18 84.0
MsG0480019588.01.T01 MTR_8g463890 46.988 83 44 0 12 94 69 151 3.99e-18 84.3
MsG0480019588.01.T01 MTR_2g026180 40.000 75 44 1 17 91 5 78 1.00e-17 83.6
MsG0480019588.01.T01 MTR_7g088140 41.667 84 49 0 11 94 122 205 9.76e-16 77.4
MsG0480019588.01.T01 MTR_5g097580 41.333 75 43 1 17 91 7 80 2.10e-15 76.6
MsG0480019588.01.T01 MTR_7g088140 41.667 84 49 0 11 94 122 205 2.16e-15 76.6
MsG0480019588.01.T01 MTR_5g097580 41.333 75 43 1 17 91 7 80 2.23e-15 76.3
MsG0480019588.01.T01 MTR_4g070080 42.857 84 44 3 10 91 1 82 2.74e-15 71.6
MsG0480019588.01.T01 MTR_4g070190 43.902 82 42 3 12 91 5 84 3.02e-15 72.4
MsG0480019588.01.T01 MTR_4g070080 42.857 84 44 3 10 91 1 82 7.15e-15 71.2
MsG0480019588.01.T01 MTR_1g073690 36.250 80 50 1 12 91 2 80 7.35e-15 74.7
MsG0480019588.01.T01 MTR_4g070140 45.122 82 41 3 12 91 5 84 9.43e-15 71.6
MsG0480019588.01.T01 MTR_5g088220 39.759 83 50 0 12 94 161 243 2.20e-14 73.6
MsG0480019588.01.T01 MTR_3g025880 37.647 85 50 2 10 92 38 121 1.02e-13 71.2
MsG0480019588.01.T01 MTR_4g063560 45.070 71 38 1 16 85 33 103 4.50e-13 65.1
MsG0480019588.01.T01 MTR_7g105260 39.759 83 49 1 17 98 33 115 5.18e-13 65.5
MsG0480019588.01.T01 MTR_4g109540 37.975 79 46 2 16 92 42 119 1.06e-12 67.4
MsG0480019588.01.T01 MTR_7g013730 34.483 87 49 3 17 100 41 122 1.60e-12 66.6
MsG0480019588.01.T01 MTR_3g080130 38.462 78 45 2 16 91 36 112 2.64e-12 63.5
MsG0480019588.01.T01 MTR_3g084040 41.379 58 34 0 16 73 36 93 2.98e-12 62.4
MsG0480019588.01.T01 MTR_3g084040 37.681 69 43 0 16 84 36 104 3.10e-12 63.5
MsG0480019588.01.T01 MTR_3g103420 37.333 75 47 0 17 91 118 192 3.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019588.01.T01 AT1G33470 60.976 246 76 8 12 254 3 231 1.72e-92 274
MsG0480019588.01.T01 AT1G33470 60.729 247 76 9 12 254 3 232 8.62e-91 270
MsG0480019588.01.T01 AT1G33470 60.729 247 76 9 12 254 3 232 9.53e-91 270
MsG0480019588.01.T01 AT1G22910 68.362 177 44 5 10 180 7 177 4.75e-73 225
MsG0480019588.01.T01 AT1G22910 68.362 177 44 5 10 180 7 177 1.34e-72 224
MsG0480019588.01.T01 AT1G22910 68.362 177 44 5 10 180 7 177 2.09e-72 227
MsG0480019588.01.T01 AT1G20880 51.802 222 87 8 6 221 14 221 4.37e-52 172
MsG0480019588.01.T01 AT1G20880 51.802 222 87 8 6 221 14 221 4.37e-52 172
MsG0480019588.01.T01 AT1G20880 51.802 222 87 8 6 221 14 221 4.37e-52 172
MsG0480019588.01.T01 AT2G46780 50.254 197 58 6 12 185 18 197 1.08e-51 173
MsG0480019588.01.T01 AT2G46780 50.254 197 58 6 12 185 18 197 1.08e-51 173
MsG0480019588.01.T01 AT1G76460 49.339 227 89 9 6 223 14 223 1.12e-51 171
MsG0480019588.01.T01 AT1G22330 63.248 117 40 2 10 125 11 125 9.26e-46 156
MsG0480019588.01.T01 AT1G78260 76.190 84 20 0 10 93 11 94 1.58e-42 148
MsG0480019588.01.T01 AT1G78260 76.190 84 20 0 10 93 11 94 2.96e-42 147
MsG0480019588.01.T01 AT3G54770 64.356 101 36 0 2 102 3 103 3.52e-39 138
MsG0480019588.01.T01 AT3G54770 64.356 101 36 0 2 102 3 103 4.02e-39 138
MsG0480019588.01.T01 AT1G22910 58.400 125 40 5 62 180 8 126 3.90e-34 123
MsG0480019588.01.T01 AT5G11412 55.682 88 39 0 7 94 43 130 2.96e-31 115
MsG0480019588.01.T01 AT5G53680 49.474 95 44 1 12 102 9 103 2.67e-27 104
MsG0480019588.01.T01 AT3G06970 50.575 87 43 0 12 98 8 94 2.44e-25 103
MsG0480019588.01.T01 AT3G54770 60.494 81 26 2 32 107 1 80 2.16e-24 98.6
MsG0480019588.01.T01 AT5G53720 55.556 81 36 0 16 96 9 89 3.07e-24 94.7
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 7.95e-19 86.7
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.16e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 7.95e-19 86.7
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.16e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 7.95e-19 86.7
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.16e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 7.95e-19 86.7
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.16e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 7.95e-19 86.7
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.16e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 9.87e-19 86.3
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.36e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 9.87e-19 86.3
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.36e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 9.87e-19 86.3
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.36e-11 63.5
MsG0480019588.01.T01 AT5G55550 37.037 108 58 3 17 115 7 113 9.87e-19 86.3
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 111 223 4.36e-11 63.5
MsG0480019588.01.T01 AT2G22090 48.193 83 43 0 12 94 100 182 2.09e-18 84.3
MsG0480019588.01.T01 AT2G22090 48.193 83 43 0 12 94 100 182 2.35e-18 84.3
MsG0480019588.01.T01 AT5G47620 48.529 68 34 1 17 84 7 73 2.58e-18 85.1
MsG0480019588.01.T01 AT5G47620 48.529 68 34 1 17 84 7 73 2.58e-18 85.1
MsG0480019588.01.T01 AT5G47620 48.529 68 34 1 17 84 7 73 2.58e-18 85.1
MsG0480019588.01.T01 AT5G47620 48.529 68 34 1 17 84 7 73 3.27e-18 84.7
MsG0480019588.01.T01 AT4G26650 34.752 141 78 5 17 148 13 148 3.55e-18 84.7
MsG0480019588.01.T01 AT4G26650 34.752 141 78 5 17 148 16 151 3.76e-18 84.7
MsG0480019588.01.T01 AT5G55550 39.080 87 50 3 17 102 7 91 9.70e-18 83.6
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 158 270 3.77e-11 63.9
MsG0480019588.01.T01 AT5G55550 39.080 87 50 3 17 102 7 91 1.03e-17 83.6
MsG0480019588.01.T01 AT5G55550 31.707 123 74 1 17 139 158 270 4.12e-11 63.9
MsG0480019588.01.T01 AT3G07810 36.111 108 57 3 17 115 7 111 1.11e-16 80.5
MsG0480019588.01.T01 AT3G07810 36.111 108 57 3 17 115 7 111 1.28e-16 80.1
MsG0480019588.01.T01 AT4G39260 38.710 93 49 3 17 109 7 91 2.23e-16 73.6
MsG0480019588.01.T01 AT3G23830 44.872 78 42 1 16 92 35 112 2.37e-16 74.7
MsG0480019588.01.T01 AT3G23830 44.872 78 42 1 16 92 35 112 2.37e-16 74.7
MsG0480019588.01.T01 AT3G15010 44.706 85 47 0 12 96 71 155 3.35e-16 78.6
MsG0480019588.01.T01 AT3G15010 28.125 96 69 0 9 104 160 255 3.93e-11 63.5
MsG0480019588.01.T01 AT3G15010 44.706 85 47 0 12 96 71 155 3.35e-16 78.6
MsG0480019588.01.T01 AT3G15010 28.125 96 69 0 9 104 160 255 3.93e-11 63.5
MsG0480019588.01.T01 AT4G39260 41.558 77 42 2 17 91 7 82 2.65e-15 71.6
MsG0480019588.01.T01 AT4G13850 37.079 89 52 1 16 104 35 119 3.03e-15 72.0
MsG0480019588.01.T01 AT4G13850 37.079 89 52 1 16 104 35 119 3.72e-15 72.0
MsG0480019588.01.T01 AT4G13850 37.079 89 52 1 16 104 35 119 4.15e-15 72.0
MsG0480019588.01.T01 AT4G39260 41.558 77 42 2 17 91 7 82 7.04e-15 71.6
MsG0480019588.01.T01 AT4G39260 45.000 60 32 1 17 76 7 65 1.21e-14 68.9
MsG0480019588.01.T01 AT2G33410 40.000 75 44 1 17 91 7 80 1.83e-14 73.6
MsG0480019588.01.T01 AT4G14300 36.250 80 50 1 12 91 2 80 2.30e-14 73.2
MsG0480019588.01.T01 AT4G14300 36.250 80 50 1 12 91 2 80 2.30e-14 73.2
MsG0480019588.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 4.21e-14 72.4
MsG0480019588.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 4.21e-14 72.4
MsG0480019588.01.T01 AT1G17640 41.667 72 41 1 17 88 67 137 4.21e-14 72.4
MsG0480019588.01.T01 AT2G41060 38.554 83 51 0 12 94 124 206 5.03e-14 72.4
MsG0480019588.01.T01 AT2G41060 38.554 83 51 0 12 94 124 206 5.03e-14 72.4
MsG0480019588.01.T01 AT2G41060 38.554 83 51 0 12 94 124 206 5.03e-14 72.4
MsG0480019588.01.T01 AT4G13850 41.667 72 38 1 16 87 35 102 5.94e-14 67.8
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT3G56860 39.759 83 50 0 12 94 136 218 6.19e-14 72.0
MsG0480019588.01.T01 AT2G21660 39.759 83 46 3 11 91 4 84 1.17e-13 67.8
MsG0480019588.01.T01 AT2G21660 39.759 83 46 3 11 91 4 84 1.65e-13 67.8
MsG0480019588.01.T01 AT2G19380 43.210 81 46 0 12 92 404 484 9.46e-13 68.9
MsG0480019588.01.T01 AT2G27330 30.275 109 71 2 2 109 11 115 3.20e-12 62.8
MsG0480019588.01.T01 AT2G22100 40.260 77 46 0 12 88 159 235 3.61e-12 66.6
MsG0480019588.01.T01 AT5G59865 53.061 49 23 0 16 64 26 74 5.37e-12 62.0
MsG0480019588.01.T01 AT5G61030 39.130 69 38 1 16 84 40 104 6.87e-12 65.5
MsG0480019588.01.T01 AT5G61030 39.130 69 38 1 16 84 40 104 6.87e-12 65.5
MsG0480019588.01.T01 AT3G26420 37.113 97 48 3 17 111 8 93 8.33e-12 64.3
MsG0480019588.01.T01 AT1G58470 43.243 74 38 1 17 86 7 80 9.80e-12 65.1
MsG0480019588.01.T01 AT1G58470 43.243 74 38 1 17 86 7 80 9.80e-12 65.1
MsG0480019588.01.T01 AT1G74230 36.364 77 49 0 16 92 34 110 1.70e-11 63.9

Find 191 sgRNAs with CRISPR-Local

Find 559 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTAAGTCTATGTATTATT+TGG 0.139727 4:+22844968 MsG0480019588.01.T01:three_prime_UTR
AATTGTCCTGCCAAATTAAT+TGG 0.140954 4:-22835935 None:intergenic
GGGATACCTTATAATGTTTA+TGG 0.144330 4:+22838317 MsG0480019588.01.T01:CDS
AAAAGCCCATCATTGGAATT+TGG 0.148260 4:+22843964 MsG0480019588.01.T01:three_prime_UTR
CTTAGTCTTTAGTGTTAATT+AGG 0.175440 4:+22844458 MsG0480019588.01.T01:three_prime_UTR
GTATTATTTGGATTGTAATT+AGG 0.201906 4:+22844980 MsG0480019588.01.T01:three_prime_UTR
ATTATAAAATTAACTAGTTT+TGG 0.202546 4:+22844329 MsG0480019588.01.T01:three_prime_UTR
CAACATGACTCCAATTAATT+TGG 0.208507 4:+22835925 MsG0480019588.01.T01:exon
TACTTTCACTTTGCCCTTCA+TGG 0.215283 4:-22844253 None:intergenic
TAACTGCAACCTTGCTTCTT+TGG 0.220641 4:+22836591 MsG0480019588.01.T01:CDS
ATTAATTTGGCAGGACAATT+TGG 0.230601 4:+22835938 MsG0480019588.01.T01:CDS
AAGGTTTCCTCTCCAGTATT+TGG 0.237540 4:+22844030 MsG0480019588.01.T01:three_prime_UTR
CCTTCGCCATATTGAAGATA+TGG 0.241363 4:-22843162 None:intergenic
AACTGCAACCTTGCTTCTTT+GGG 0.243448 4:+22836592 MsG0480019588.01.T01:CDS
CATGTACTACATATGCTAAT+TGG 0.250198 4:-22844675 None:intergenic
ACAGCACAGTATCCTGTTTA+TGG 0.260295 4:+22843081 MsG0480019588.01.T01:CDS
GAGGAGGAGGGAGGAACATT+AGG 0.264611 4:+22838207 MsG0480019588.01.T01:CDS
GGTTCTTTCCAGACAGGATT+TGG 0.274909 4:+22838236 MsG0480019588.01.T01:CDS
CCCAAAGGAAGATGACTAAT+TGG 0.281407 4:-22844531 None:intergenic
GTGTTGAAGGCTTAGATCTT+TGG 0.295951 4:-22836618 None:intergenic
AAAGCCCATCATTGGAATTT+GGG 0.301422 4:+22843965 MsG0480019588.01.T01:three_prime_UTR
ACTACCGGCGGCTACACTTC+TGG 0.306242 4:+22843198 MsG0480019588.01.T01:CDS
ACCAATTAGTCATCTTCCTT+TGG 0.309957 4:+22844530 MsG0480019588.01.T01:three_prime_UTR
CTTTATTTAATCTCTCTCTA+TGG 0.316911 4:+22844901 MsG0480019588.01.T01:three_prime_UTR
TCATACCCATAAACATTATA+AGG 0.319240 4:-22838323 None:intergenic
TACCGTAGGGTAACTGTAAT+CGG 0.319248 4:-22839756 None:intergenic
AGGTAGTGGTTGGTGTGTTT+TGG 0.319672 4:-22835718 None:intergenic
ACGTAACCTAGGGAGATATT+TGG 0.324337 4:+22844758 MsG0480019588.01.T01:three_prime_UTR
TTGCTCAAAATACTTCTTCA+TGG 0.326539 4:-22836020 None:intergenic
CCAATTAGTCATCTTCCTTT+GGG 0.326733 4:+22844531 MsG0480019588.01.T01:three_prime_UTR
GCTCTCCTACCATCAATTAT+AGG 0.326846 4:-22836568 None:intergenic
ATATTAATATTACCATGTTT+TGG 0.333370 4:-22836640 None:intergenic
TTTCCACTCATCATTATCAT+AGG 0.338195 4:+22843990 MsG0480019588.01.T01:three_prime_UTR
GCTATAGGAAATAGCTAAGT+TGG 0.346018 4:+22844160 MsG0480019588.01.T01:three_prime_UTR
TCTGCTGCTGCCTTGCCATC+AGG 0.362203 4:+22843327 MsG0480019588.01.T01:CDS
CATTATAAGGTATCCCTTGC+TGG 0.367371 4:-22838310 None:intergenic
CATAGAGAGAGATTAAATAA+AGG 0.368675 4:-22844900 None:intergenic
TAGGGAGATATTTGGTTCCT+TGG 0.369260 4:+22844766 MsG0480019588.01.T01:three_prime_UTR
CAGTATCCTGTTTATGGAAA+TGG 0.374418 4:+22843087 MsG0480019588.01.T01:CDS
GGATACCTTATAATGTTTAT+GGG 0.377409 4:+22838318 MsG0480019588.01.T01:CDS
TACACTTCTGGCCAAGGTTA+TGG 0.379037 4:+22843210 MsG0480019588.01.T01:CDS
AAACATAATACAAGAAATAA+AGG 0.381298 4:-22845071 None:intergenic
TGGAAAATGCAGAGCTACTA+TGG 0.382407 4:+22843042 MsG0480019588.01.T01:intron
AGGAGGAGGGAGGAACATTA+GGG 0.383370 4:+22838208 MsG0480019588.01.T01:CDS
AAGATGACTAATTGGTTTGT+TGG 0.385171 4:-22844523 None:intergenic
TACTACCCATATCTTCAATA+TGG 0.386372 4:+22843156 MsG0480019588.01.T01:CDS
TGAAAATTTGTAGGAGGAGG+AGG 0.391447 4:+22838194 MsG0480019588.01.T01:intron
AGTCTCTAACGATGAGGAAT+TGG 0.395605 4:-22843795 None:intergenic
CTTCAATATGGCGAAGGAAC+CGG 0.396046 4:+22843168 MsG0480019588.01.T01:CDS
TGAATAGAAGAGAGACAATT+AGG 0.399416 4:-22835680 None:intergenic
AGGAAACCTTTGGGCCCCTA+TGG 0.399733 4:-22844017 None:intergenic
AAACCTTTGGGCCCCTATGG+GGG 0.402979 4:-22844014 None:intergenic
GAGTATGACTCTCCAAATAC+TGG 0.405244 4:-22844042 None:intergenic
TGAGCAATTTGGTGAGATCT+TGG 0.406717 4:+22836036 MsG0480019588.01.T01:CDS
GCTGGTCCATTTCCATAAAC+AGG 0.416170 4:-22843093 None:intergenic
AGCAGAAGGAGCAAGAGAAA+TGG 0.418666 4:-22843310 None:intergenic
TAGTCATCTTCCTTTGGGTA+AGG 0.421226 4:+22844536 MsG0480019588.01.T01:three_prime_UTR
ATGTACTACATATGCTAATT+GGG 0.421438 4:-22844674 None:intergenic
CACTTCAAGAAGCAATAACT+TGG 0.421790 4:-22843858 None:intergenic
TAAATTGAACATCTCACAAT+AGG 0.425800 4:+22844300 MsG0480019588.01.T01:three_prime_UTR
ATAGAGAGAGATTAAATAAA+GGG 0.426326 4:-22844899 None:intergenic
GCAGAAGGAGCAAGAGAAAT+GGG 0.426995 4:-22843309 None:intergenic
ATTGCAAAATATTATCCTCT+AGG 0.431422 4:-22835875 None:intergenic
CATTCTCTGCTGGATGAGAA+TGG 0.433705 4:+22845027 MsG0480019588.01.T01:three_prime_UTR
GGTGGGTATGCTCAGCACTA+TGG 0.438801 4:+22843282 MsG0480019588.01.T01:CDS
ACATACAAATCCATAGCCTT+TGG 0.439269 4:-22836095 None:intergenic
AACCTTTGGGCCCCTATGGG+GGG 0.439527 4:-22844013 None:intergenic
CCACTCCTCCAAATCCTGTC+TGG 0.440497 4:-22838244 None:intergenic
AATACTGGAGAGGAAACCTT+TGG 0.447696 4:-22844027 None:intergenic
AGTTGCATTGGTTCCTTGAA+AGG 0.449518 4:+22844107 MsG0480019588.01.T01:three_prime_UTR
TAATCACCAACAAAAGCTAT+AGG 0.452546 4:+22844145 MsG0480019588.01.T01:three_prime_UTR
TGAAGTCTATAGATAGATCT+AGG 0.453443 4:-22835798 None:intergenic
CTTCGCCATATTGAAGATAT+GGG 0.453891 4:-22843161 None:intergenic
ACTTTCACTTTGCCCTTCAT+GGG 0.455488 4:-22844252 None:intergenic
TACCCACCAGTCGAAGCAAT+TGG 0.457405 4:-22843267 None:intergenic
TTTGCTCACCAACCATGGTT+AGG 0.457866 4:+22844798 MsG0480019588.01.T01:three_prime_UTR
TTATTAACTTTGACCCATGA+AGG 0.459939 4:+22844239 MsG0480019588.01.T01:three_prime_UTR
AGGGAGGAACATTAGGGTAA+TGG 0.461392 4:+22838214 MsG0480019588.01.T01:CDS
ACCGTAGGGTAACTGTAATC+GGG 0.463847 4:-22839755 None:intergenic
TCACTATACTCTCATAATCA+TGG 0.463896 4:+22843360 MsG0480019588.01.T01:CDS
GGGAGGAACATTAGGGTAAT+GGG 0.468258 4:+22838215 MsG0480019588.01.T01:CDS
TAGTATCATCAATCAACCTT+TGG 0.471189 4:+22843883 MsG0480019588.01.T01:three_prime_UTR
AGGATCAATTCATTCTCTGC+TGG 0.472302 4:+22845017 MsG0480019588.01.T01:three_prime_UTR
AATTGCTAATCACACCTCTC+TGG 0.475193 4:+22844360 MsG0480019588.01.T01:three_prime_UTR
TAGTACATGTCATCATCATT+TGG 0.476666 4:+22844689 MsG0480019588.01.T01:three_prime_UTR
CAGACAGGATTTGGAGGAGT+GGG 0.480274 4:+22838245 MsG0480019588.01.T01:CDS
GATGGCAAGGCAGCAGCAGA+AGG 0.484803 4:-22843324 None:intergenic
CTAATTAACACTAAAGACTA+AGG 0.486901 4:-22844457 None:intergenic
GGAAACCTTTGGGCCCCTAT+GGG 0.488032 4:-22844016 None:intergenic
AAAAGCCCAAATTCCAATGA+TGG 0.490568 4:-22843970 None:intergenic
ATGACTCCAATTAATTTGGC+AGG 0.491636 4:+22835929 MsG0480019588.01.T01:CDS
CTTCTTCTCAAGGTAGTGGT+TGG 0.497331 4:-22835728 None:intergenic
TCTCCAATTGCTTCGACTGG+TGG 0.498029 4:+22843264 MsG0480019588.01.T01:CDS
ATTCATTGTGGCTAAACTAA+AGG 0.499584 4:+22844598 MsG0480019588.01.T01:three_prime_UTR
GAATGGGAAAACTTAGCCCT+TGG 0.501467 4:+22844190 MsG0480019588.01.T01:three_prime_UTR
AAAACACTTGCACGTAACCT+AGG 0.503314 4:+22844747 MsG0480019588.01.T01:three_prime_UTR
CAAGCTCTCATAGCAGCATC+AGG 0.508307 4:-22836532 None:intergenic
AAAGGGAGGAGATTGTGAAA+TGG 0.509619 4:-22844882 None:intergenic
GTTTATGGAAATGGACCAGC+TGG 0.512520 4:+22843096 MsG0480019588.01.T01:CDS
GATGCTGCTCCTATAATTGA+TGG 0.515656 4:+22836559 MsG0480019588.01.T01:CDS
TATTCTCCAATTGCTTCGAC+TGG 0.519489 4:+22843261 MsG0480019588.01.T01:CDS
GAAACCTTTGGGCCCCTATG+GGG 0.519998 4:-22844015 None:intergenic
GCCGCCGGTAGTTGCACCGC+CGG 0.522451 4:-22843187 None:intergenic
GGATCTTCTTCTCAAGGTAG+TGG 0.524106 4:-22835732 None:intergenic
CTCCAATTGCTTCGACTGGT+GGG 0.526275 4:+22843265 MsG0480019588.01.T01:CDS
AGTCATCTTCCTTTGGGTAA+GGG 0.527017 4:+22844537 MsG0480019588.01.T01:three_prime_UTR
ACTGGAAGATCCAAAGGCTA+TGG 0.530867 4:+22836085 MsG0480019588.01.T01:CDS
TTGCAAAATATTATCCTCTA+GGG 0.532532 4:-22835874 None:intergenic
AGTTTAGCAATCGTGGACAT+TGG 0.532861 4:+22844394 MsG0480019588.01.T01:three_prime_UTR
GTAATGGGTTCTTTCCAGAC+AGG 0.536127 4:+22838230 MsG0480019588.01.T01:CDS
TTAGAAGGATCTTCTTCTCA+AGG 0.536139 4:-22835738 None:intergenic
TATAGATAGATCTAGGTGAT+GGG 0.536729 4:-22835791 None:intergenic
GAAAATTTGTAGGAGGAGGA+GGG 0.539063 4:+22838195 MsG0480019588.01.T01:intron
CCTTGCTGGATGGCATAATG+AGG 0.539851 4:-22838296 None:intergenic
ATATTGAAGATATGGGTAGT+AGG 0.540954 4:-22843154 None:intergenic
ATACTGGAGAGGAAACCTTT+GGG 0.541037 4:-22844026 None:intergenic
AAAGTGAAAGTAATAAAGAA+TGG 0.542677 4:+22844264 MsG0480019588.01.T01:three_prime_UTR
GGAACCGGCGGTGCAACTAC+CGG 0.544089 4:+22843183 MsG0480019588.01.T01:CDS
CCAGTCATCATCCCTCCAGC+TGG 0.546713 4:-22843111 None:intergenic
GAATATTGAAACACCTGAGG+TGG 0.547295 4:-22843243 None:intergenic
TCTTTCCAGACAGGATTTGG+AGG 0.549169 4:+22838239 MsG0480019588.01.T01:CDS
CATTTGGAGAGCTACATCAA+TGG 0.549286 4:+22844705 MsG0480019588.01.T01:three_prime_UTR
GCTACTATGGTATGTACGGT+GGG 0.552444 4:+22843055 MsG0480019588.01.T01:CDS
GTAATTAGGAAATCTAAAGT+AGG 0.554338 4:+22844994 MsG0480019588.01.T01:three_prime_UTR
ATAGCCTTTGGATCTTCCAG+TGG 0.554952 4:-22836083 None:intergenic
TCACACCTCTCTGGATGAAG+AGG 0.555010 4:+22844369 MsG0480019588.01.T01:three_prime_UTR
TGCTGCTATGAGAGCTTGTG+TGG 0.555924 4:+22836537 MsG0480019588.01.T01:CDS
CCAGCTGGAGGGATGATGAC+TGG 0.557715 4:+22843111 MsG0480019588.01.T01:CDS
AAAGCCCAAATTCCAATGAT+GGG 0.557859 4:-22843969 None:intergenic
CTATAGATAGATCTAGGTGA+TGG 0.559793 4:-22835792 None:intergenic
CAGAGCTACTATGGTATGTA+CGG 0.561819 4:+22843051 MsG0480019588.01.T01:intron
TAGTAAGATCATCATCATCA+AGG 0.562193 4:+22835897 MsG0480019588.01.T01:five_prime_UTR
CCAGACAGGATTTGGAGGAG+TGG 0.563630 4:+22838244 MsG0480019588.01.T01:CDS
AAGGAACCAAATATCTCCCT+AGG 0.566140 4:-22844764 None:intergenic
GAGAGAGATTAAATAAAGGG+AGG 0.570102 4:-22844896 None:intergenic
TGGTGTTAACTACCCACCTC+AGG 0.572192 4:+22843230 MsG0480019588.01.T01:CDS
TTCACTTTGCTCACCAACCA+TGG 0.572317 4:+22844793 MsG0480019588.01.T01:three_prime_UTR
CTCATTATGCCATCCAGCAA+GGG 0.572637 4:+22838297 MsG0480019588.01.T01:CDS
ACCTATGTCCTAACCATGGT+TGG 0.576898 4:-22844806 None:intergenic
CCTCATTATGCCATCCAGCA+AGG 0.580886 4:+22838296 MsG0480019588.01.T01:CDS
ATTAGGAAATCTAAAGTAGG+AGG 0.583122 4:+22844997 MsG0480019588.01.T01:three_prime_UTR
ATAAAATTAATAGAGTATGA+AGG 0.583666 4:-22844945 None:intergenic
TGAGGGAAGGTTGCAGCTGA+AGG 0.584132 4:-22838278 None:intergenic
TATTAACTTTGACCCATGAA+GGG 0.595032 4:+22844240 MsG0480019588.01.T01:three_prime_UTR
ATAGATCTAGGTGATGGGGT+TGG 0.595388 4:-22835786 None:intergenic
CTGCTCCTATAATTGATGGT+AGG 0.595874 4:+22836563 MsG0480019588.01.T01:CDS
CCATATCTTCAATATGGCGA+AGG 0.596896 4:+22843162 MsG0480019588.01.T01:CDS
AAACACTTGCACGTAACCTA+GGG 0.597280 4:+22844748 MsG0480019588.01.T01:three_prime_UTR
GAAGTAGAAACCTGATGGCA+AGG 0.598302 4:-22843337 None:intergenic
GGCGGCTACACTTCTGGCCA+AGG 0.598379 4:+22843204 MsG0480019588.01.T01:CDS
ACCAACCATGGTTAGGACAT+AGG 0.600992 4:+22844805 MsG0480019588.01.T01:three_prime_UTR
AGAGGAAAGTTTAGCAATCG+TGG 0.603847 4:+22844387 MsG0480019588.01.T01:three_prime_UTR
ATAAGGTATCCCTTGCTGGA+TGG 0.606510 4:-22838306 None:intergenic
GTTATCACTGACAAAGCCAC+TGG 0.609344 4:+22836067 MsG0480019588.01.T01:CDS
AGTGAGAAGTAGAAACCTGA+TGG 0.610348 4:-22843342 None:intergenic
GGAAAACTTAGCCCTTGGAA+AGG 0.612258 4:+22844195 MsG0480019588.01.T01:three_prime_UTR
CCCCGATTACAGTTACCCTA+CGG 0.615766 4:+22839754 MsG0480019588.01.T01:CDS
CCGTAGGGTAACTGTAATCG+GGG 0.616563 4:-22839754 None:intergenic
CTGTGCCACAGGCGTGACAA+TGG 0.617286 4:+22843761 MsG0480019588.01.T01:CDS
ACTTCAAGAAGCAATAACTT+GGG 0.623357 4:-22843857 None:intergenic
TATGGAAATGGACCAGCTGG+AGG 0.625601 4:+22843099 MsG0480019588.01.T01:CDS
GGTAGTTAACACCATAACCT+TGG 0.625763 4:-22843221 None:intergenic
TTTGGACACCCAAAGAAGCA+AGG 0.627687 4:-22836600 None:intergenic
AAAGCCACTGGAAGATCCAA+AGG 0.627799 4:+22836079 MsG0480019588.01.T01:CDS
CTTGCTGGATGGCATAATGA+GGG 0.627859 4:-22838295 None:intergenic
AATTTGTAGGAGGAGGAGGG+AGG 0.630642 4:+22838198 MsG0480019588.01.T01:intron
ATAGATAGATCTAGGTGATG+GGG 0.630730 4:-22835790 None:intergenic
TAGAGCCATTGTCACGCCTG+TGG 0.632743 4:-22843766 None:intergenic
TGACTCTCCAAATACTGGAG+AGG 0.633085 4:-22844037 None:intergenic
ATGGAAATGGACCAGCTGGA+GGG 0.637061 4:+22843100 MsG0480019588.01.T01:CDS
TTGGCCAGAAGTGTAGCCGC+CGG 0.638787 4:-22843202 None:intergenic
AGCTACTATGGTATGTACGG+TGG 0.639695 4:+22843054 MsG0480019588.01.T01:CDS
TCATAGCTAGCTAACCCTAG+AGG 0.642107 4:+22835860 MsG0480019588.01.T01:five_prime_UTR
GGGCCTATGATAATGATGAG+TGG 0.643771 4:-22843993 None:intergenic
AAGCCTTCAACACCAAAACA+TGG 0.645444 4:+22836628 MsG0480019588.01.T01:CDS
AGACACCATGGTTAGACCAA+AGG 0.645695 4:-22843899 None:intergenic
AATATTGAAACACCTGAGGT+GGG 0.650438 4:-22843242 None:intergenic
ATCAACCTTTGGTCTAACCA+TGG 0.651912 4:+22843894 MsG0480019588.01.T01:three_prime_UTR
TAATACAAGAAATAAAGGCA+TGG 0.656720 4:-22845066 None:intergenic
ATTCACCTATGTCCTAACCA+TGG 0.660474 4:-22844810 None:intergenic
CTGGATGGCATAATGAGGGA+AGG 0.669727 4:-22838291 None:intergenic
CTACTATGGTATGTACGGTG+GGG 0.669988 4:+22843056 MsG0480019588.01.T01:CDS
ACTTTCCTCTTCATCCAGAG+AGG 0.670728 4:-22844374 None:intergenic
ACCGGCGGTGCAACTACCGG+CGG 0.685466 4:+22843186 MsG0480019588.01.T01:CDS
TGAGCAAAGTGAAGTAACCA+AGG 0.686396 4:-22844783 None:intergenic
GATATGAGTCTCTAACGATG+AGG 0.693503 4:-22843801 None:intergenic
CAATATGGCGAAGGAACCGG+CGG 0.694720 4:+22843171 MsG0480019588.01.T01:CDS
GGAGAATATTGAAACACCTG+AGG 0.699373 4:-22843246 None:intergenic
CGTAGGGTAACTGTAATCGG+GGG 0.726499 4:-22839753 None:intergenic
GCTGGAGGGATGATGACTGG+TGG 0.745650 4:+22843114 MsG0480019588.01.T01:CDS
GTGTGATGAGAGAGACACCA+TGG 0.755172 4:-22843911 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCATAAAAAAAAATG+GGG + Chr4:22840265-22840284 MsG0480019588.01.T01:intron 10.0%
!! AAATAGTTAAATAATATTTG+AGG - Chr4:22839438-22839457 None:intergenic 10.0%
!! ATATATTAAGAAACTAAATA+AGG + Chr4:22841632-22841651 MsG0480019588.01.T01:intron 10.0%
!! ATTATAGATAAAATACAAAA+GGG - Chr4:22838053-22838072 None:intergenic 10.0%
!! GAAAAAATCATAAAAAAAAA+TGG + Chr4:22840263-22840282 MsG0480019588.01.T01:intron 10.0%
!! GAAAAAATCATAAAAAATTT+CGG + Chr4:22840195-22840214 MsG0480019588.01.T01:intron 10.0%
!! GAAAGAAAAAATAATAATAA+TGG + Chr4:22838661-22838680 MsG0480019588.01.T01:intron 10.0%
!! TATGACTAAATTTAAATAAA+TGG - Chr4:22842182-22842201 None:intergenic 10.0%
!! TATTATAGATAAAATACAAA+AGG - Chr4:22838054-22838073 None:intergenic 10.0%
!! TGAAATTTAAATTAATCAAA+TGG - Chr4:22840890-22840909 None:intergenic 10.0%
!!! AAATAATAATAATTTGCAAA+AGG - Chr4:22837032-22837051 None:intergenic 10.0%
!!! AAATATTTTCTTCAAAAAAA+AGG + Chr4:22837856-22837875 MsG0480019588.01.T01:intron 10.0%
!!! ATAAAATACTTCTTTTTTTT+AGG + Chr4:22841425-22841444 MsG0480019588.01.T01:intron 10.0%
!!! ATCAAATAATTTTCATAAAA+AGG + Chr4:22844494-22844513 MsG0480019588.01.T01:three_prime_UTR 10.0%
!!! ATTATAAAATTAACTAGTTT+TGG + Chr4:22844329-22844348 MsG0480019588.01.T01:three_prime_UTR 10.0%
!!! ATTTTATGATTTTTTTTTTG+AGG - Chr4:22839558-22839577 None:intergenic 10.0%
!!! TAAAATACTTCTTTTTTTTA+GGG + Chr4:22841426-22841445 MsG0480019588.01.T01:intron 10.0%
!!! TCAAATAATTTTCATAAAAA+GGG + Chr4:22844495-22844514 MsG0480019588.01.T01:three_prime_UTR 10.0%
!!! TTAGTATGTTAATTTTTAAT+TGG + Chr4:22841299-22841318 MsG0480019588.01.T01:intron 10.0%
!!! TTTTTTTTATGATTTTTTCT+CGG - Chr4:22840262-22840281 None:intergenic 10.0%
!! AAAAAGATACTAAATTTAGA+AGG - Chr4:22835756-22835775 None:intergenic 15.0%
!! AAAAATACAAAATACATTGT+TGG - Chr4:22837582-22837601 None:intergenic 15.0%
!! AAACATAATACAAGAAATAA+AGG - Chr4:22845074-22845093 None:intergenic 15.0%
!! AACATATAGATATATATACA+TGG + Chr4:22842461-22842480 MsG0480019588.01.T01:intron 15.0%
!! AATTAATAAATAAGGATGTT+TGG + Chr4:22838008-22838027 MsG0480019588.01.T01:intron 15.0%
!! AGAAAATTAATTGAGTAATT+TGG - Chr4:22839268-22839287 None:intergenic 15.0%
!! ATAAAATTAATAGAGTATGA+AGG - Chr4:22844948-22844967 None:intergenic 15.0%
!! ATAAGATGAGTTTATTAATT+AGG - Chr4:22836829-22836848 None:intergenic 15.0%
!! ATATAGGAAAAATATAGTTT+AGG - Chr4:22837328-22837347 None:intergenic 15.0%
!! ATTTCATGAATAATATCATT+TGG - Chr4:22841256-22841275 None:intergenic 15.0%
!! CAATCTTTCAAAAAATATTA+TGG + Chr4:22842435-22842454 MsG0480019588.01.T01:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + Chr4:22838000-22838019 MsG0480019588.01.T01:intron 15.0%
!! GCATATTAAATTATATTGAA+TGG - Chr4:22838481-22838500 None:intergenic 15.0%
!! GTAAAATTAATTGAGTAATT+TGG - Chr4:22839329-22839348 None:intergenic 15.0%
!! TATTTCATGAATATATCATT+TGG - Chr4:22841079-22841098 None:intergenic 15.0%
!! TCTTTATTAATCTTTCATTA+TGG + Chr4:22836705-22836724 MsG0480019588.01.T01:intron 15.0%
!!! AAAAAGAAGTATTTTATGAA+TGG - Chr4:22841422-22841441 None:intergenic 15.0%
!!! AAAAGAAGTATTTTATGAAT+GGG - Chr4:22841421-22841440 None:intergenic 15.0%
!!! AAATTCTATTTTTCCTAATT+TGG + Chr4:22841837-22841856 MsG0480019588.01.T01:intron 15.0%
!!! AATTACTCAATTAATTTTCT+CGG + Chr4:22839268-22839287 MsG0480019588.01.T01:intron 15.0%
!!! AATTCTATTTTTCCTAATTT+GGG + Chr4:22841838-22841857 MsG0480019588.01.T01:intron 15.0%
!!! AATTTATTATTTCAAGTAGA+AGG + Chr4:22836183-22836202 MsG0480019588.01.T01:intron 15.0%
!!! ACTTTTATGATTTTTTTTTG+AGG - Chr4:22839532-22839551 None:intergenic 15.0%
!!! ATAATCATGGTTTTAAATTA+GGG + Chr4:22843373-22843392 MsG0480019588.01.T01:CDS 15.0%
!!! ATATGAACAACAATTTTTTA+AGG - Chr4:22842278-22842297 None:intergenic 15.0%
!!! ATATTAATATTACCATGTTT+TGG - Chr4:22836643-22836662 None:intergenic 15.0%
!!! ATATTTTTTGAAAGATTGTT+TGG - Chr4:22842433-22842452 None:intergenic 15.0%
!!! ATTTTATGAAACTTTTTTGA+AGG - Chr4:22839505-22839524 None:intergenic 15.0%
!!! CTCTTTTAAAAAAAAAAGTA+AGG - Chr4:22841816-22841835 None:intergenic 15.0%
!!! GTTTGAAGTTAAATATATAT+AGG - Chr4:22837344-22837363 None:intergenic 15.0%
!!! TAATTTGGTTATACTATTTT+TGG - Chr4:22839253-22839272 None:intergenic 15.0%
!!! TTAACATTTAGAGATATTTT+TGG - Chr4:22836746-22836765 None:intergenic 15.0%
!!! TTTTCTTTTGAAATATTGAA+TGG + Chr4:22838145-22838164 MsG0480019588.01.T01:intron 15.0%
!!! TTTTTCTTGAACAAAAAAAT+GGG - Chr4:22844086-22844105 None:intergenic 15.0%
!!! TTTTTTATGTAAATTCATTG+TGG + Chr4:22844586-22844605 MsG0480019588.01.T01:three_prime_UTR 15.0%
!!! TTTTTTCTTGAACAAAAAAA+TGG - Chr4:22844087-22844106 None:intergenic 15.0%
!! AAAAAACAAAAAATCACGAA+AGG - Chr4:22837291-22837310 None:intergenic 20.0%
!! AAAAACAAAAAATCACGAAA+GGG - Chr4:22837290-22837309 None:intergenic 20.0%
!! AAAACAAAAAAAAATAAGCC+AGG + Chr4:22840320-22840339 MsG0480019588.01.T01:intron 20.0%
!! AAACAAAAAAAAATAAGCCA+GGG + Chr4:22840321-22840340 MsG0480019588.01.T01:intron 20.0%
!! AAAGTGAAAGTAATAAAGAA+TGG + Chr4:22844264-22844283 MsG0480019588.01.T01:three_prime_UTR 20.0%
!! AAATCATAAGATATAGATGA+TGG + Chr4:22841870-22841889 MsG0480019588.01.T01:intron 20.0%
!! AATTTAGTCATAAACTTTCA+CGG + Chr4:22842190-22842209 MsG0480019588.01.T01:intron 20.0%
!! ACCAAAAAAAAAAAAACACT+TGG + Chr4:22835828-22835847 MsG0480019588.01.T01:five_prime_UTR 20.0%
!! ATAGAGAGAGATTAAATAAA+GGG - Chr4:22844902-22844921 None:intergenic 20.0%
!! ATATAATACAAAGTTTCCAT+TGG + Chr4:22842334-22842353 MsG0480019588.01.T01:intron 20.0%
!! ATCAATTCTACTACATTAAT+GGG + Chr4:22841142-22841161 MsG0480019588.01.T01:intron 20.0%
!! ATCAATTCTACTACATTTAA+TGG + Chr4:22840964-22840983 MsG0480019588.01.T01:intron 20.0%
!! ATGTAATGATGAAAATTTGT+AGG + Chr4:22838185-22838204 MsG0480019588.01.T01:intron 20.0%
!! CCAAAAAAAAAAAAACACTT+GGG + Chr4:22835829-22835848 MsG0480019588.01.T01:five_prime_UTR 20.0%
!! CTAGAACTTATACTAAAATT+AGG - Chr4:22840800-22840819 None:intergenic 20.0%
!! CTCCTAAAAATAACTAAATT+GGG - Chr4:22844633-22844652 None:intergenic 20.0%
!! GTAATTTGGTTATACTAATT+TGG - Chr4:22839315-22839334 None:intergenic 20.0%
!! GTATTATTTGGATTGTAATT+AGG + Chr4:22844980-22844999 MsG0480019588.01.T01:three_prime_UTR 20.0%
!! GTTTAAGTCTATGTATTATT+TGG + Chr4:22844968-22844987 MsG0480019588.01.T01:three_prime_UTR 20.0%
!! TAATATAAATCTACAACGAT+AGG - Chr4:22842362-22842381 None:intergenic 20.0%
!! TATAATTTAATATGCTAGCT+AGG + Chr4:22838486-22838505 MsG0480019588.01.T01:intron 20.0%
!! TATGATTCTGTTTGATATAA+CGG - Chr4:22839640-22839659 None:intergenic 20.0%
!! TATTTCTCTATATGAACAAA+TGG + Chr4:22838639-22838658 MsG0480019588.01.T01:intron 20.0%
!! TCAATTCTACTACATTTAAT+GGG + Chr4:22840965-22840984 MsG0480019588.01.T01:intron 20.0%
!! TGACTAAATCTATTAAATAG+CGG - Chr4:22843476-22843495 None:intergenic 20.0%
!! TTGGTTATACTAAATATTTG+AGG - Chr4:22839371-22839390 None:intergenic 20.0%
!! TTGTTATAATTTCTTGATGA+TGG - Chr4:22842762-22842781 None:intergenic 20.0%
!! TTTAATTGGTTAGTATTTGT+TGG + Chr4:22841313-22841332 MsG0480019588.01.T01:intron 20.0%
!!! AAAAAAAAAGGATTAGTGAT+TGG + Chr4:22840446-22840465 MsG0480019588.01.T01:intron 20.0%
!!! AATATTTCATGCATGTTTTT+GGG + Chr4:22837194-22837213 MsG0480019588.01.T01:intron 20.0%
!!! AATTTGTTTGTTTCCAATTT+AGG + Chr4:22836495-22836514 MsG0480019588.01.T01:intron 20.0%
!!! ATTCAACTTTTTTCTAAAAG+TGG - Chr4:22837384-22837403 None:intergenic 20.0%
!!! ATTCTATTTTTCCTAATTTG+GGG + Chr4:22841839-22841858 MsG0480019588.01.T01:intron 20.0%
!!! ATTGGATTAAATAATTTTGG+GGG - Chr4:22842235-22842254 None:intergenic 20.0%
!!! CAAACTTTTTTTTTTTTGAG+AGG + Chr4:22838808-22838827 MsG0480019588.01.T01:intron 20.0%
!!! CAATTTAGTTATTTTTAGGA+GGG + Chr4:22844632-22844651 MsG0480019588.01.T01:three_prime_UTR 20.0%
!!! CATAATCATGGTTTTAAATT+AGG + Chr4:22843372-22843391 MsG0480019588.01.T01:CDS 20.0%
!!! GATTGGATTAAATAATTTTG+GGG - Chr4:22842236-22842255 None:intergenic 20.0%
!!! GGATTGGATTAAATAATTTT+GGG - Chr4:22842237-22842256 None:intergenic 20.0%
!!! TCTATATATACCTTTTACTT+AGG + Chr4:22839811-22839830 MsG0480019588.01.T01:intron 20.0%
!!! TGAGACAAACTTTTTTTTAA+GGG - Chr4:22840524-22840543 None:intergenic 20.0%
!!! TGGAAAAAAAAGTTTTTTGA+AGG + Chr4:22840295-22840314 MsG0480019588.01.T01:intron 20.0%
!!! TGGATTGGATTAAATAATTT+TGG - Chr4:22842238-22842257 None:intergenic 20.0%
!!! TTAACTGATTAAATTTTGCA+GGG + Chr4:22840421-22840440 MsG0480019588.01.T01:intron 20.0%
!!! TTGAGACAAACTTTTTTTTA+AGG - Chr4:22840525-22840544 None:intergenic 20.0%
!!! TTTAACTGATTAAATTTTGC+AGG + Chr4:22840420-22840439 MsG0480019588.01.T01:intron 20.0%
!!! TTTTAAAATCAAGCATAACA+AGG - Chr4:22842537-22842556 None:intergenic 20.0%
!!! TTTTCTTGAACAAAAAAATG+GGG - Chr4:22844085-22844104 None:intergenic 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + Chr4:22837914-22837933 MsG0480019588.01.T01:intron 20.0%
!!! TTTTTTTCCTTTCTAAAAAG+TGG - Chr4:22842141-22842160 None:intergenic 20.0%
! AAAAAAAATGGGGAAAAATC+TGG + Chr4:22840275-22840294 MsG0480019588.01.T01:intron 25.0%
! AAAATCCACATGCATTATTA+CGG + Chr4:22837626-22837645 MsG0480019588.01.T01:intron 25.0%
! AAAGAATACTACATATGAAC+TGG - Chr4:22838547-22838566 None:intergenic 25.0%
! AACAAAAAAAAATAAGCCAG+GGG + Chr4:22840322-22840341 MsG0480019588.01.T01:intron 25.0%
! AACAAAAACAAAAATCAGAG+TGG - Chr4:22842505-22842524 None:intergenic 25.0%
! AAGATAGAAAAAAAGAGGAA+AGG - Chr4:22835609-22835628 None:intergenic 25.0%
! AAGTAGTTAGATATTACACA+CGG - Chr4:22842388-22842407 None:intergenic 25.0%
! AGAAAGAGAGGAAAATAAAA+AGG - Chr4:22838373-22838392 None:intergenic 25.0%
! AGATAAATGAGAGATAAAGT+AGG + Chr4:22838945-22838964 MsG0480019588.01.T01:intron 25.0%
! AGATAGAAAAAAAGAGGAAA+GGG - Chr4:22835608-22835627 None:intergenic 25.0%
! AGATGAAAAAGTTACATCAA+GGG - Chr4:22838609-22838628 None:intergenic 25.0%
! AGCAAAAGATAGAAAAAAAG+AGG - Chr4:22835614-22835633 None:intergenic 25.0%
! ATAGAAACAACAAATGATTG+TGG + Chr4:22842069-22842088 MsG0480019588.01.T01:intron 25.0%
! ATATTGAAACTCTTTACACA+TGG - Chr4:22837179-22837198 None:intergenic 25.0%
! ATGTACTACATATGCTAATT+GGG - Chr4:22844677-22844696 None:intergenic 25.0%
! ATTATTTGAAAGAGAGTAGT+TGG - Chr4:22839897-22839916 None:intergenic 25.0%
! ATTGCAAAATATTATCCTCT+AGG - Chr4:22835878-22835897 None:intergenic 25.0%
! CATAGAGAGAGATTAAATAA+AGG - Chr4:22844903-22844922 None:intergenic 25.0%
! CATATAGAGAAATATGTGTA+AGG - Chr4:22838633-22838652 None:intergenic 25.0%
! CCATTTACATTTGTACTTTA+AGG + Chr4:22838410-22838429 MsG0480019588.01.T01:intron 25.0%
! CCTCCTAAAAATAACTAAAT+TGG - Chr4:22844634-22844653 None:intergenic 25.0%
! CCTTAAAGTACAAATGTAAA+TGG - Chr4:22838413-22838432 None:intergenic 25.0%
! CTAATTAACACTAAAGACTA+AGG - Chr4:22844460-22844479 None:intergenic 25.0%
! CTACAACAAAATGAAATTCT+CGG - Chr4:22842821-22842840 None:intergenic 25.0%
! CTGATTTAATCTATCAGATA+GGG + Chr4:22838922-22838941 MsG0480019588.01.T01:intron 25.0%
! GATCAATTCTACTACATTAA+TGG + Chr4:22841141-22841160 MsG0480019588.01.T01:intron 25.0%
! GGATACCTTATAATGTTTAT+GGG + Chr4:22838318-22838337 MsG0480019588.01.T01:CDS 25.0%
! GTTTATCTGATTATGCAATT+TGG + Chr4:22843692-22843711 MsG0480019588.01.T01:intron 25.0%
! TAAATTGAACATCTCACAAT+AGG + Chr4:22844300-22844319 MsG0480019588.01.T01:three_prime_UTR 25.0%
! TAATACAAGAAATAAAGGCA+TGG - Chr4:22845069-22845088 None:intergenic 25.0%
! TAATGATGAAAATTTGTAGG+AGG + Chr4:22838188-22838207 MsG0480019588.01.T01:intron 25.0%
! TAGATGAAAAAGTTACATCA+AGG - Chr4:22838610-22838629 None:intergenic 25.0%
! TAGATGTTACCATACAAAAA+AGG - Chr4:22844428-22844447 None:intergenic 25.0%
! TCATACCCATAAACATTATA+AGG - Chr4:22838326-22838345 None:intergenic 25.0%
! TTAACTGATTAAACTTTGCA+GGG - Chr4:22840027-22840046 None:intergenic 25.0%
! TTAAGGAAAAAAATAAGCCA+GGG - Chr4:22840127-22840146 None:intergenic 25.0%
! TTCAAGAAAAAAAGTTGCAT+TGG + Chr4:22844095-22844114 MsG0480019588.01.T01:three_prime_UTR 25.0%
! TTGCAAAATATTATCCTCTA+GGG - Chr4:22835877-22835896 None:intergenic 25.0%
! TTTAACTGATTAAACTTTGC+AGG - Chr4:22840028-22840047 None:intergenic 25.0%
! TTTAAGGAAAAAAATAAGCC+AGG - Chr4:22840128-22840147 None:intergenic 25.0%
!! ACTGATTTAATCTATCAGAT+AGG + Chr4:22838921-22838940 MsG0480019588.01.T01:intron 25.0%
!! CAATATTTCATGCATGTTTT+TGG + Chr4:22837193-22837212 MsG0480019588.01.T01:intron 25.0%
!! CGTAATGGAAAATAAAAATG+TGG + Chr4:22843008-22843027 MsG0480019588.01.T01:intron 25.0%
!! CTAAGTTGGAAAAAATGAAT+GGG + Chr4:22844174-22844193 MsG0480019588.01.T01:three_prime_UTR 25.0%
!! CTTAGTCTTTAGTGTTAATT+AGG + Chr4:22844458-22844477 MsG0480019588.01.T01:three_prime_UTR 25.0%
!! CTTTATTTAATCTCTCTCTA+TGG + Chr4:22844901-22844920 MsG0480019588.01.T01:three_prime_UTR 25.0%
!! GTAATTAGGAAATCTAAAGT+AGG + Chr4:22844994-22845013 MsG0480019588.01.T01:three_prime_UTR 25.0%
!! TAACTGATTAAATTTTGCAG+GGG + Chr4:22840422-22840441 MsG0480019588.01.T01:intron 25.0%
!! TATTTTCTTTGAGCATAACA+AGG - Chr4:22842790-22842809 None:intergenic 25.0%
!! TCAAATGGTATTTTCAAAGT+TGG - Chr4:22840875-22840894 None:intergenic 25.0%
!! TTGGATTAAATAATTTTGGG+GGG - Chr4:22842234-22842253 None:intergenic 25.0%
!! TTTTATGAATGGGAGTTATA+AGG - Chr4:22841411-22841430 None:intergenic 25.0%
!!! AAGAAGTATTTTGAGCAATT+TGG + Chr4:22836025-22836044 MsG0480019588.01.T01:CDS 25.0%
!!! ACAATCATTTGTTGTTTCTA+TGG - Chr4:22842070-22842089 None:intergenic 25.0%
!!! AGCCCAATTTAGTTATTTTT+AGG + Chr4:22844628-22844647 MsG0480019588.01.T01:three_prime_UTR 25.0%
!!! AGTTCTAGAATTAATTTGTG+TGG + Chr4:22840812-22840831 MsG0480019588.01.T01:intron 25.0%
!!! ATGTGTTTTTTGAAACGTAA+TGG + Chr4:22842993-22843012 MsG0480019588.01.T01:intron 25.0%
!!! CCAATTTAGTTATTTTTAGG+AGG + Chr4:22844631-22844650 MsG0480019588.01.T01:three_prime_UTR 25.0%
!!! CCCAAGTGTTTTTTTTTTTT+TGG - Chr4:22835832-22835851 None:intergenic 25.0%
!!! CTTTCAAACTTGTTATTCAT+TGG + Chr4:22838836-22838855 MsG0480019588.01.T01:intron 25.0%
!!! CTTTTTTTCGATACTTCTTA+GGG - Chr4:22837244-22837263 None:intergenic 25.0%
!!! TAGAATTAATTTGTGTGGTA+GGG + Chr4:22840817-22840836 MsG0480019588.01.T01:intron 25.0%
!!! TTACATTTGTACTTTAAGGT+TGG + Chr4:22838414-22838433 MsG0480019588.01.T01:intron 25.0%
!!! TTCTATTTTTCCTAATTTGG+GGG + Chr4:22841840-22841859 MsG0480019588.01.T01:intron 25.0%
!!! TTTCTTTCCACTTTTTAGAA+AGG + Chr4:22842131-22842150 MsG0480019588.01.T01:intron 25.0%
!!! TTTGAATACAAGAAGTATTC+AGG - Chr4:22837733-22837752 None:intergenic 25.0%
!!! TTTGGTTATACTATTTTTGG+TGG - Chr4:22839250-22839269 None:intergenic 25.0%
AAAAAACACAGTGATGTTTG+TGG + Chr4:22842155-22842174 MsG0480019588.01.T01:intron 30.0%
AAAAAATTAGTGGTGCATGA+AGG + Chr4:22841584-22841603 MsG0480019588.01.T01:intron 30.0%
AAAATGTGGTTGTAACGTAA+TGG + Chr4:22843022-22843041 MsG0480019588.01.T01:intron 30.0%
AAAGAAAAAAAGCCCATCAT+TGG + Chr4:22843957-22843976 MsG0480019588.01.T01:three_prime_UTR 30.0%
AAATCCACATGCATTATTAC+GGG + Chr4:22837627-22837646 MsG0480019588.01.T01:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + Chr4:22837950-22837969 MsG0480019588.01.T01:intron 30.0%
AATTGTCCTGCCAAATTAAT+TGG - Chr4:22835938-22835957 None:intergenic 30.0%
ACAAATATAGGTATCAAAGG+GGG + Chr4:22841896-22841915 MsG0480019588.01.T01:intron 30.0%
ACTTCAAGAAGCAATAACTT+GGG - Chr4:22843860-22843879 None:intergenic 30.0%
AGTGGAAAGAAATAGAACAA+AGG - Chr4:22842123-22842142 None:intergenic 30.0%
ATAGAGAATGGAAGAATTCA+AGG - Chr4:22839713-22839732 None:intergenic 30.0%
ATAGATGCCGAAAAAATTAG+TGG + Chr4:22841574-22841593 MsG0480019588.01.T01:intron 30.0%
ATATTGAAGATATGGGTAGT+AGG - Chr4:22843157-22843176 None:intergenic 30.0%
ATGCATAAGATATGCAAGAT+CGG - Chr4:22842630-22842649 None:intergenic 30.0%
ATGTTACCATACAAAAAAGG+TGG - Chr4:22844425-22844444 None:intergenic 30.0%
ATTCATTGTGGCTAAACTAA+AGG + Chr4:22844598-22844617 MsG0480019588.01.T01:three_prime_UTR 30.0%
CAACATGACTCCAATTAATT+TGG + Chr4:22835925-22835944 MsG0480019588.01.T01:exon 30.0%
CAAGAGGATATGAATGAAAT+TGG + Chr4:22837879-22837898 MsG0480019588.01.T01:intron 30.0%
CACAAATATAGGTATCAAAG+GGG + Chr4:22841895-22841914 MsG0480019588.01.T01:intron 30.0%
CATAAAATATGCAAGGTATG+GGG + Chr4:22839209-22839228 MsG0480019588.01.T01:intron 30.0%
CATGTACTACATATGCTAAT+TGG - Chr4:22844678-22844697 None:intergenic 30.0%
CCACAAATATAGGTATCAAA+GGG + Chr4:22841894-22841913 MsG0480019588.01.T01:intron 30.0%
CCTTTGATACCTATATTTGT+GGG - Chr4:22841896-22841915 None:intergenic 30.0%
CGTACAAGCTTAATGTTAAA+TGG + Chr4:22837001-22837020 MsG0480019588.01.T01:intron 30.0%
CTAAAAGTGGTTTAAGAACT+AGG - Chr4:22837371-22837390 None:intergenic 30.0%
CTAGTGAAAGAAACTAAACA+TGG - Chr4:22836353-22836372 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + Chr4:22839202-22839221 MsG0480019588.01.T01:intron 30.0%
GATAGAAAAAAAGAGGAAAG+GGG - Chr4:22835607-22835626 None:intergenic 30.0%
GATGAAAAAGTTACATCAAG+GGG - Chr4:22838608-22838627 None:intergenic 30.0%
GCATAAAATATGCAAGGTAT+GGG + Chr4:22839208-22839227 MsG0480019588.01.T01:intron 30.0%
GGGATACCTTATAATGTTTA+TGG + Chr4:22838317-22838336 MsG0480019588.01.T01:CDS 30.0%
TAACTGATTAAACTTTGCAG+GGG - Chr4:22840026-22840045 None:intergenic 30.0%
TAAGGAAAAAAATAAGCCAG+GGG - Chr4:22840126-22840145 None:intergenic 30.0%
TAAGTTCAACTATCGAGATT+TGG + Chr4:22843574-22843593 MsG0480019588.01.T01:intron 30.0%
TAATCACCAACAAAAGCTAT+AGG + Chr4:22844145-22844164 MsG0480019588.01.T01:three_prime_UTR 30.0%
TAATCCTCCAACAAAAACTT+TGG - Chr4:22835978-22835997 None:intergenic 30.0%
TACTACCCATATCTTCAATA+TGG + Chr4:22843156-22843175 MsG0480019588.01.T01:CDS 30.0%
TAGTAAGATCATCATCATCA+AGG + Chr4:22835897-22835916 MsG0480019588.01.T01:five_prime_UTR 30.0%
TAGTACATGTCATCATCATT+TGG + Chr4:22844689-22844708 MsG0480019588.01.T01:three_prime_UTR 30.0%
TAGTATCATCAATCAACCTT+TGG + Chr4:22843883-22843902 MsG0480019588.01.T01:three_prime_UTR 30.0%
TATAGAAAAGAGAGAAAGAG+AGG - Chr4:22838385-22838404 None:intergenic 30.0%
TATAGATAGATCTAGGTGAT+GGG - Chr4:22835794-22835813 None:intergenic 30.0%
TATTAACTTTGACCCATGAA+GGG + Chr4:22844240-22844259 MsG0480019588.01.T01:three_prime_UTR 30.0%
TCACTATACTCTCATAATCA+TGG + Chr4:22843360-22843379 MsG0480019588.01.T01:CDS 30.0%
TCTATATTAAGCGTCTCTAA+AGG + Chr4:22837445-22837464 MsG0480019588.01.T01:intron 30.0%
TGAAGTCTATAGATAGATCT+AGG - Chr4:22835801-22835820 None:intergenic 30.0%
TGAATAGAAGAGAGACAATT+AGG - Chr4:22835683-22835702 None:intergenic 30.0%
TGCATAAAATATGCAAGGTA+TGG + Chr4:22839207-22839226 MsG0480019588.01.T01:intron 30.0%
TGGTGATACATGTATTAATG+AGG + Chr4:22843712-22843731 MsG0480019588.01.T01:intron 30.0%
TGTTACCATACAAAAAAGGT+GGG - Chr4:22844424-22844443 None:intergenic 30.0%
TTATAGCTACGAGACAATTA+TGG + Chr4:22842407-22842426 MsG0480019588.01.T01:intron 30.0%
TTATTAACTTTGACCCATGA+AGG + Chr4:22844239-22844258 MsG0480019588.01.T01:three_prime_UTR 30.0%
TTCTTCAAAAAAAAGGCAAG+AGG + Chr4:22837863-22837882 MsG0480019588.01.T01:intron 30.0%
TTGCTCAAAATACTTCTTCA+TGG - Chr4:22836023-22836042 None:intergenic 30.0%
TTTAACATTAAGCTTGTACG+TGG - Chr4:22837001-22837020 None:intergenic 30.0%
TTTAGTCAAATCTCGATAGT+TGG + Chr4:22843488-22843507 MsG0480019588.01.T01:intron 30.0%
TTTCCACTCATCATTATCAT+AGG + Chr4:22843990-22844009 MsG0480019588.01.T01:three_prime_UTR 30.0%
! AAAAAAGGATTAGTGATTGG+AGG + Chr4:22840449-22840468 MsG0480019588.01.T01:intron 30.0%
! AAAAAGGATTAGTGATTGGA+GGG + Chr4:22840450-22840469 MsG0480019588.01.T01:intron 30.0%
! AAGTTAAAAGTACATACCGT+AGG - Chr4:22839773-22839792 None:intergenic 30.0%
! AATGGTATTTTCAAAGTTGG+AGG - Chr4:22840872-22840891 None:intergenic 30.0%
! ACATACACCAAAGTTTTTGT+TGG + Chr4:22835968-22835987 MsG0480019588.01.T01:CDS 30.0%
! AGTTAAAAGTACATACCGTA+GGG - Chr4:22839772-22839791 None:intergenic 30.0%
! ATTAATTTGGCAGGACAATT+TGG + Chr4:22835938-22835957 MsG0480019588.01.T01:CDS 30.0%
! ATTAGGAAATCTAAAGTAGG+AGG + Chr4:22844997-22845016 MsG0480019588.01.T01:three_prime_UTR 30.0%
! CTATTTCCTATAGCTTTTGT+TGG - Chr4:22844154-22844173 None:intergenic 30.0%
! GCTAAGTTGGAAAAAATGAA+TGG + Chr4:22844173-22844192 MsG0480019588.01.T01:three_prime_UTR 30.0%
! TGGCAACTTTTAAATTGAGA+TGG + Chr4:22844921-22844940 MsG0480019588.01.T01:three_prime_UTR 30.0%
! TTCTTCCATTCTCTATTTTC+AGG + Chr4:22839717-22839736 MsG0480019588.01.T01:intron 30.0%
!! AAGATGACTAATTGGTTTGT+TGG - Chr4:22844526-22844545 None:intergenic 30.0%
!! CAAACTTGTTATTCATTGGT+TGG + Chr4:22838840-22838859 MsG0480019588.01.T01:intron 30.0%
!! CTAGAATTAATTTGTGTGGT+AGG + Chr4:22840816-22840835 MsG0480019588.01.T01:intron 30.0%
!! TTGGTGATTACACATCTTTT+TGG - Chr4:22844135-22844154 None:intergenic 30.0%
!! TTTTTACTTAGCCTTTCCAA+GGG - Chr4:22844209-22844228 None:intergenic 30.0%
!!! AATGATGGGCTTTTTTTCTT+TGG - Chr4:22843958-22843977 None:intergenic 30.0%
!!! ACTAATTTTTTCGGCATCTA+TGG - Chr4:22841575-22841594 None:intergenic 30.0%
!!! AGTAGTCATTTTTGCACATT+TGG - Chr4:22842685-22842704 None:intergenic 30.0%
!!! ATTTTGCTCTTGTTTTTCTG+TGG + Chr4:22837677-22837696 MsG0480019588.01.T01:intron 30.0%
!!! GCTTTTTTTCGATACTTCTT+AGG - Chr4:22837245-22837264 None:intergenic 30.0%
!!! GGTTTTGTTGTTTTATGAGT+TGG - Chr4:22838460-22838479 None:intergenic 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG + Chr4:22837903-22837922 MsG0480019588.01.T01:intron 30.0%
!!! TCATGCACCACTAATTTTTT+CGG - Chr4:22841584-22841603 None:intergenic 30.0%
!!! TGACTTTTTTTATGTTGTGC+CGG + Chr4:22842592-22842611 MsG0480019588.01.T01:intron 30.0%
!!! TTACGTGCAAGTGTTTTTTT+TGG - Chr4:22844744-22844763 None:intergenic 30.0%
!!! TTTTGCTCTTGTTTTTCTGT+GGG + Chr4:22837678-22837697 MsG0480019588.01.T01:intron 30.0%
!!! TTTTTTACTTAGCCTTTCCA+AGG - Chr4:22844210-22844229 None:intergenic 30.0%
AAAAGCCCAAATTCCAATGA+TGG - Chr4:22843973-22843992 None:intergenic 35.0%
AAAAGCCCATCATTGGAATT+TGG + Chr4:22843964-22843983 MsG0480019588.01.T01:three_prime_UTR 35.0%
AAAGCCCAAATTCCAATGAT+GGG - Chr4:22843972-22843991 None:intergenic 35.0%
AAAGCCCATCATTGGAATTT+GGG + Chr4:22843965-22843984 MsG0480019588.01.T01:three_prime_UTR 35.0%
AACCCGTAAGATCATTGATA+TGG + Chr4:22837829-22837848 MsG0480019588.01.T01:intron 35.0%
AATATTGAAACACCTGAGGT+GGG - Chr4:22843245-22843264 None:intergenic 35.0%
ACATACAAATCCATAGCCTT+TGG - Chr4:22836098-22836117 None:intergenic 35.0%
ACCAATTAGTCATCTTCCTT+TGG + Chr4:22844530-22844549 MsG0480019588.01.T01:three_prime_UTR 35.0%
ACCTAATAAAGCAAATGAGC+GGG + Chr4:22837951-22837970 MsG0480019588.01.T01:intron 35.0%
ATACTACATATGAACTGGCA+AGG - Chr4:22838542-22838561 None:intergenic 35.0%
ATAGATAGATCTAGGTGATG+GGG - Chr4:22835793-22835812 None:intergenic 35.0%
ATCACGTTATTGAACACTCT+TGG - Chr4:22841532-22841551 None:intergenic 35.0%
ATGCAGCAATAGTACTGTTA+AGG - Chr4:22842034-22842053 None:intergenic 35.0%
CAAAACGCATCCTAAGTAAA+AGG - Chr4:22839824-22839843 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + Chr4:22837962-22837981 MsG0480019588.01.T01:intron 35.0%
CACTTCAAGAAGCAATAACT+TGG - Chr4:22843861-22843880 None:intergenic 35.0%
CAGTATCCTGTTTATGGAAA+TGG + Chr4:22843087-22843106 MsG0480019588.01.T01:CDS 35.0%
CAGTGATTAAATTGGGTCAA+AGG + Chr4:22840390-22840409 MsG0480019588.01.T01:intron 35.0%
CCAATTAGTCATCTTCCTTT+GGG + Chr4:22844531-22844550 MsG0480019588.01.T01:three_prime_UTR 35.0%
CCCACAAATATAGGTATCAA+AGG + Chr4:22841893-22841912 MsG0480019588.01.T01:intron 35.0%
CCCTTTGATACCTATATTTG+TGG - Chr4:22841897-22841916 None:intergenic 35.0%
CTATAGATAGATCTAGGTGA+TGG - Chr4:22835795-22835814 None:intergenic 35.0%
CTGCCATATCAATGATCTTA+CGG - Chr4:22837835-22837854 None:intergenic 35.0%
CTTCGCCATATTGAAGATAT+GGG - Chr4:22843164-22843183 None:intergenic 35.0%
CTTGAACAAAAAAATGGGGA+GGG - Chr4:22844081-22844100 None:intergenic 35.0%
GAAGCTATAAGTAGCAAAAG+TGG - Chr4:22838724-22838743 None:intergenic 35.0%
GAGAGAGATTAAATAAAGGG+AGG - Chr4:22844899-22844918 None:intergenic 35.0%
GAGTACCTGAAAATAGAGAA+TGG - Chr4:22839725-22839744 None:intergenic 35.0%
GATTGAATCTCAATGAATCG+TGG + Chr4:22836278-22836297 MsG0480019588.01.T01:intron 35.0%
GCTATAGGAAATAGCTAAGT+TGG + Chr4:22844160-22844179 MsG0480019588.01.T01:three_prime_UTR 35.0%
TATTGTACCCTACAGAATGT+GGG + Chr4:22841986-22842005 MsG0480019588.01.T01:intron 35.0%
TCACGAAAAGTGACCTAAAT+TGG - Chr4:22836511-22836530 None:intergenic 35.0%
TCTTGAACAAAAAAATGGGG+AGG - Chr4:22844082-22844101 None:intergenic 35.0%
TGAGCTGTAGTGAAAAAAGT+TGG - Chr4:22841965-22841984 None:intergenic 35.0%
TGATGAAAATTTGTAGGAGG+AGG + Chr4:22838191-22838210 MsG0480019588.01.T01:intron 35.0%
TGCATAAGATATGCAAGATC+GGG - Chr4:22842629-22842648 None:intergenic 35.0%
TGCCATATCAATGATCTTAC+GGG - Chr4:22837834-22837853 None:intergenic 35.0%
TTAGAAGGATCTTCTTCTCA+AGG - Chr4:22835741-22835760 None:intergenic 35.0%
TTATTGTACCCTACAGAATG+TGG + Chr4:22841985-22842004 MsG0480019588.01.T01:intron 35.0%
TTGAACAAAAAAATGGGGAG+GGG - Chr4:22844080-22844099 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - Chr4:22839999-22840018 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - Chr4:22839998-22840017 None:intergenic 35.0%
! AAGGATGTTTGGACTCTTTT+AGG + Chr4:22838019-22838038 MsG0480019588.01.T01:intron 35.0%
! ATGACTCCAATTAATTTGGC+AGG + Chr4:22835929-22835948 MsG0480019588.01.T01:CDS 35.0%
! TACACCAAAGTTTTTGTTGG+AGG + Chr4:22835971-22835990 MsG0480019588.01.T01:CDS 35.0%
! TATTTTCTTCCCTTACCCAA+AGG - Chr4:22844549-22844568 None:intergenic 35.0%
! TCAAGCTTGCTTATGAATGT+GGG + Chr4:22841937-22841956 MsG0480019588.01.T01:intron 35.0%
! TGCTACTTATAGCTTCACAT+GGG + Chr4:22838728-22838747 MsG0480019588.01.T01:intron 35.0%
! TTGCTACTTATAGCTTCACA+TGG + Chr4:22838727-22838746 MsG0480019588.01.T01:intron 35.0%
! TTTTGACATACCCCCAAATT+AGG - Chr4:22841853-22841872 None:intergenic 35.0%
! TTTTGCAGGGGCAAAAAAAA+AGG + Chr4:22840434-22840453 MsG0480019588.01.T01:intron 35.0%
!! CATCTTTTTGGTACCTTTCA+AGG - Chr4:22844123-22844142 None:intergenic 35.0%
!! GAGTTATAAGGCTGATTTGA+TGG - Chr4:22841399-22841418 None:intergenic 35.0%
!! GTTAAGGGGTGGATTAATAA+AGG - Chr4:22841363-22841382 None:intergenic 35.0%
!!! ACTTTTTTTATGTTGTGCCG+GGG + Chr4:22842594-22842613 MsG0480019588.01.T01:intron 35.0%
!!! ATTGTTGGTTTTTGTCTTGC+AGG - Chr4:22837567-22837586 None:intergenic 35.0%
!!! GACTTTTTTTATGTTGTGCC+GGG + Chr4:22842593-22842612 MsG0480019588.01.T01:intron 35.0%
!!! GGTTATACTATTTTTGGTGG+TGG - Chr4:22839247-22839266 None:intergenic 35.0%
!!! TTACCATGTTTTGGTGTTGA+AGG - Chr4:22836634-22836653 None:intergenic 35.0%
!!! TTTTGTTGGAGGATTAGCTT+GGG + Chr4:22835982-22836001 MsG0480019588.01.T01:CDS 35.0%
!!! TTTTTGTTGGAGGATTAGCT+TGG + Chr4:22835981-22836000 MsG0480019588.01.T01:CDS 35.0%
AAAACACTTGCACGTAACCT+AGG + Chr4:22844747-22844766 MsG0480019588.01.T01:three_prime_UTR 40.0%
AAACACTTGCACGTAACCTA+GGG + Chr4:22844748-22844767 MsG0480019588.01.T01:three_prime_UTR 40.0%
AAAGGGAGGAGATTGTGAAA+TGG - Chr4:22844885-22844904 None:intergenic 40.0%
AAATCTCGATAGTTGGACTG+AGG + Chr4:22843495-22843514 MsG0480019588.01.T01:intron 40.0%
AACTGCAACCTTGCTTCTTT+GGG + Chr4:22836592-22836611 MsG0480019588.01.T01:CDS 40.0%
AAGACCCGTAATAATGCATG+TGG - Chr4:22837634-22837653 None:intergenic 40.0%
AAGCCTTCAACACCAAAACA+TGG + Chr4:22836628-22836647 MsG0480019588.01.T01:CDS 40.0%
AAGGAACCAAATATCTCCCT+AGG - Chr4:22844767-22844786 None:intergenic 40.0%
AAGGTTTCCTCTCCAGTATT+TGG + Chr4:22844030-22844049 MsG0480019588.01.T01:three_prime_UTR 40.0%
AATACTGGAGAGGAAACCTT+TGG - Chr4:22844030-22844049 None:intergenic 40.0%
AATTGCTAATCACACCTCTC+TGG + Chr4:22844360-22844379 MsG0480019588.01.T01:three_prime_UTR 40.0%
ACAGCACAGTATCCTGTTTA+TGG + Chr4:22843081-22843100 MsG0480019588.01.T01:CDS 40.0%
ACGTAACCTAGGGAGATATT+TGG + Chr4:22844758-22844777 MsG0480019588.01.T01:three_prime_UTR 40.0%
ACGTCAGCAAATCACCAAAA+TGG + Chr4:22840080-22840099 MsG0480019588.01.T01:intron 40.0%
ACGTCAGCAAATGACCAAAA+GGG - Chr4:22840368-22840387 None:intergenic 40.0%
ACTTTCACTTTGCCCTTCAT+GGG - Chr4:22844255-22844274 None:intergenic 40.0%
AGAGAGAGAGAGAGAGAATT+GGG - Chr4:22835648-22835667 None:intergenic 40.0%
AGAGGAAAGTTTAGCAATCG+TGG + Chr4:22844387-22844406 MsG0480019588.01.T01:three_prime_UTR 40.0%
AGGATCAATTCATTCTCTGC+TGG + Chr4:22845017-22845036 MsG0480019588.01.T01:three_prime_UTR 40.0%
AGTCATCTTCCTTTGGGTAA+GGG + Chr4:22844537-22844556 MsG0480019588.01.T01:three_prime_UTR 40.0%
AGTCTCTAACGATGAGGAAT+TGG - Chr4:22843798-22843817 None:intergenic 40.0%
AGTGAGAAGTAGAAACCTGA+TGG - Chr4:22843345-22843364 None:intergenic 40.0%
AGTTTAGCAATCGTGGACAT+TGG + Chr4:22844394-22844413 MsG0480019588.01.T01:three_prime_UTR 40.0%
ATACTGGAGAGGAAACCTTT+GGG - Chr4:22844029-22844048 None:intergenic 40.0%
ATCAACCTTTGGTCTAACCA+TGG + Chr4:22843894-22843913 MsG0480019588.01.T01:three_prime_UTR 40.0%
ATTCACCTATGTCCTAACCA+TGG - Chr4:22844813-22844832 None:intergenic 40.0%
ATTGTACCCTACAGAATGTG+GGG + Chr4:22841987-22842006 MsG0480019588.01.T01:intron 40.0%
CAAATTGACCTGATTCCACA+TGG + Chr4:22838582-22838601 MsG0480019588.01.T01:intron 40.0%
CAGAGCTACTATGGTATGTA+CGG + Chr4:22843051-22843070 MsG0480019588.01.T01:intron 40.0%
CAGTGATTAAACTGGGTCAA+AGG - Chr4:22840058-22840077 None:intergenic 40.0%
CATAAGATATGCAAGATCGG+GGG - Chr4:22842627-22842646 None:intergenic 40.0%
CATAGCATAACTTTCCACTC+TGG - Chr4:22837148-22837167 None:intergenic 40.0%
CATTTGGAGAGCTACATCAA+TGG + Chr4:22844705-22844724 MsG0480019588.01.T01:three_prime_UTR 40.0%
CCATATCTTCAATATGGCGA+AGG + Chr4:22843162-22843181 MsG0480019588.01.T01:CDS 40.0%
CCCAAAGGAAGATGACTAAT+TGG - Chr4:22844534-22844553 None:intergenic 40.0%
CCTTCGCCATATTGAAGATA+TGG - Chr4:22843165-22843184 None:intergenic 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG - Chr4:22840014-22840033 None:intergenic 40.0%
GAAAATTTGTAGGAGGAGGA+GGG + Chr4:22838195-22838214 MsG0480019588.01.T01:intron 40.0%
GAATATTGAAACACCTGAGG+TGG - Chr4:22843246-22843265 None:intergenic 40.0%
GACGTGGCAGTGATTAAATT+GGG + Chr4:22840383-22840402 MsG0480019588.01.T01:intron 40.0%
GAGTATGACTCTCCAAATAC+TGG - Chr4:22844045-22844064 None:intergenic 40.0%
GATATGAGTCTCTAACGATG+AGG - Chr4:22843804-22843823 None:intergenic 40.0%
GATGCTGCTCCTATAATTGA+TGG + Chr4:22836559-22836578 MsG0480019588.01.T01:CDS 40.0%
GCATAAGATATGCAAGATCG+GGG - Chr4:22842628-22842647 None:intergenic 40.0%
GCATCTACGTGAAAGATTTG+TGG + Chr4:22840730-22840749 MsG0480019588.01.T01:intron 40.0%
GCTCTCCTACCATCAATTAT+AGG - Chr4:22836571-22836590 None:intergenic 40.0%
GCTTGAATATTCTTCCAGAG+TGG + Chr4:22837131-22837150 MsG0480019588.01.T01:intron 40.0%
GGAGAATATTGAAACACCTG+AGG - Chr4:22843249-22843268 None:intergenic 40.0%
GGTAGTTAACACCATAACCT+TGG - Chr4:22843224-22843243 None:intergenic 40.0%
GTGTTGAAGGCTTAGATCTT+TGG - Chr4:22836621-22836640 None:intergenic 40.0%
TAACTGCAACCTTGCTTCTT+TGG + Chr4:22836591-22836610 MsG0480019588.01.T01:CDS 40.0%
TAAGCTCACGAGGACTAATT+TGG - Chr4:22839168-22839187 None:intergenic 40.0%
TACCGTAGGGTAACTGTAAT+CGG - Chr4:22839759-22839778 None:intergenic 40.0%
TACTTTCACTTTGCCCTTCA+TGG - Chr4:22844256-22844275 None:intergenic 40.0%
TAGTCATCTTCCTTTGGGTA+AGG + Chr4:22844536-22844555 MsG0480019588.01.T01:three_prime_UTR 40.0%
TATTCTCCAATTGCTTCGAC+TGG + Chr4:22843261-22843280 MsG0480019588.01.T01:CDS 40.0%
TATTGACCAGACTACACTTG+CGG + Chr4:22843429-22843448 MsG0480019588.01.T01:intron 40.0%
TCGAGATTTGACATGATCGT+TGG + Chr4:22843537-22843556 MsG0480019588.01.T01:intron 40.0%
TCTACAACGATAGGATCCAA+TGG - Chr4:22842353-22842372 None:intergenic 40.0%
TGAAAATTTGTAGGAGGAGG+AGG + Chr4:22838194-22838213 MsG0480019588.01.T01:intron 40.0%
TGAACAAAAAAATGGGGAGG+GGG - Chr4:22844079-22844098 None:intergenic 40.0%
TGACGTGGCAGTGATTAAAT+TGG + Chr4:22840382-22840401 MsG0480019588.01.T01:intron 40.0%
TGAGCAAAGTGAAGTAACCA+AGG - Chr4:22844786-22844805 None:intergenic 40.0%
TGGAAAATGCAGAGCTACTA+TGG + Chr4:22843042-22843061 MsG0480019588.01.T01:intron 40.0%
TTTCACGTAGATGCAAGTCT+AGG - Chr4:22840724-22840743 None:intergenic 40.0%
! AGATGATGGCCCACAAATAT+AGG + Chr4:22841884-22841903 MsG0480019588.01.T01:intron 40.0%
! CATTATAAGGTATCCCTTGC+TGG - Chr4:22838313-22838332 None:intergenic 40.0%
! CTGCTCCTATAATTGATGGT+AGG + Chr4:22836563-22836582 MsG0480019588.01.T01:CDS 40.0%
! GTCAAGCTTGCTTATGAATG+TGG + Chr4:22841936-22841955 MsG0480019588.01.T01:intron 40.0%
! TAGGGAGATATTTGGTTCCT+TGG + Chr4:22844766-22844785 MsG0480019588.01.T01:three_prime_UTR 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - Chr4:22837955-22837974 None:intergenic 40.0%
! TGAGCAATTTGGTGAGATCT+TGG + Chr4:22836036-22836055 MsG0480019588.01.T01:CDS 40.0%
!! AAGGGGTGGATTAATAAAGG+TGG - Chr4:22841360-22841379 None:intergenic 40.0%
!! AGGGGTGGATTAATAAAGGT+GGG - Chr4:22841359-22841378 None:intergenic 40.0%
!! AGTTGCATTGGTTCCTTGAA+AGG + Chr4:22844107-22844126 MsG0480019588.01.T01:three_prime_UTR 40.0%
!! ATTTGATGGTTGAGTTGGGA+GGG - Chr4:22841385-22841404 None:intergenic 40.0%
!! GCTGATTTGATGGTTGAGTT+GGG - Chr4:22841389-22841408 None:intergenic 40.0%
!! GGATTAATAAAGGTGGGTTG+AGG - Chr4:22841353-22841372 None:intergenic 40.0%
!!! ATTTTGGTGATTTGCTGACG+TGG - Chr4:22840081-22840100 None:intergenic 40.0%
!!! GATGTCCCACCTTTTTTGTA+TGG + Chr4:22844416-22844435 MsG0480019588.01.T01:three_prime_UTR 40.0%
AAAGCCACTGGAAGATCCAA+AGG + Chr4:22836079-22836098 MsG0480019588.01.T01:CDS 45.0%
AAGCAAGACACACAGCTAAG+TGG + Chr4:22837101-22837120 MsG0480019588.01.T01:intron 45.0%
ACCAACCATGGTTAGGACAT+AGG + Chr4:22844805-22844824 MsG0480019588.01.T01:three_prime_UTR 45.0%
ACCGTAGGGTAACTGTAATC+GGG - Chr4:22839758-22839777 None:intergenic 45.0%
ACCTATGTCCTAACCATGGT+TGG - Chr4:22844809-22844828 None:intergenic 45.0%
ACTGGAAGATCCAAAGGCTA+TGG + Chr4:22836085-22836104 MsG0480019588.01.T01:CDS 45.0%
ACTTTCCTCTTCATCCAGAG+AGG - Chr4:22844377-22844396 None:intergenic 45.0%
AGACACCATGGTTAGACCAA+AGG - Chr4:22843902-22843921 None:intergenic 45.0%
AGAGAGAGAGAGAATTGGGA+GGG - Chr4:22835644-22835663 None:intergenic 45.0%
AGCAGAAGGAGCAAGAGAAA+TGG - Chr4:22843313-22843332 None:intergenic 45.0%
AGCTACTATGGTATGTACGG+TGG + Chr4:22843054-22843073 MsG0480019588.01.T01:CDS 45.0%
AGGGAGGAACATTAGGGTAA+TGG + Chr4:22838214-22838233 MsG0480019588.01.T01:CDS 45.0%
ATAGCCTTTGGATCTTCCAG+TGG - Chr4:22836086-22836105 None:intergenic 45.0%
ATTATCATAGGCCCCCCATA+GGG + Chr4:22844002-22844021 MsG0480019588.01.T01:three_prime_UTR 45.0%
ATTTGTCCGCAAGTGTAGTC+TGG - Chr4:22843438-22843457 None:intergenic 45.0%
CACGTCAGCAAATGACCAAA+AGG - Chr4:22840369-22840388 None:intergenic 45.0%
CACTATAGCAAGCAGTGGAT+TGG - Chr4:22842253-22842272 None:intergenic 45.0%
CATTCTCTGCTGGATGAGAA+TGG + Chr4:22845027-22845046 MsG0480019588.01.T01:three_prime_UTR 45.0%
CTACTATGGTATGTACGGTG+GGG + Chr4:22843056-22843075 MsG0480019588.01.T01:CDS 45.0%
CTCATTATGCCATCCAGCAA+GGG + Chr4:22838297-22838316 MsG0480019588.01.T01:CDS 45.0%
CTTCAATATGGCGAAGGAAC+CGG + Chr4:22843168-22843187 MsG0480019588.01.T01:CDS 45.0%
CTTGCTGGATGGCATAATGA+GGG - Chr4:22838298-22838317 None:intergenic 45.0%
GAAGTAGAAACCTGATGGCA+AGG - Chr4:22843340-22843359 None:intergenic 45.0%
GAATGGGAAAACTTAGCCCT+TGG + Chr4:22844190-22844209 MsG0480019588.01.T01:three_prime_UTR 45.0%
GACGTGGCAGTGATTAAACT+GGG - Chr4:22840065-22840084 None:intergenic 45.0%
GAGAGAGAGAGAGAGAGAAT+TGG - Chr4:22835649-22835668 None:intergenic 45.0%
GCAGAAGGAGCAAGAGAAAT+GGG - Chr4:22843312-22843331 None:intergenic 45.0%
GCTACTATGGTATGTACGGT+GGG + Chr4:22843055-22843074 MsG0480019588.01.T01:CDS 45.0%
GCTGGTCCATTTCCATAAAC+AGG - Chr4:22843096-22843115 None:intergenic 45.0%
GGAAAACTTAGCCCTTGGAA+AGG + Chr4:22844195-22844214 MsG0480019588.01.T01:three_prime_UTR 45.0%
GGATCTTCTTCTCAAGGTAG+TGG - Chr4:22835735-22835754 None:intergenic 45.0%
GGGAGGAACATTAGGGTAAT+GGG + Chr4:22838215-22838234 MsG0480019588.01.T01:CDS 45.0%
GGTTCTTTCCAGACAGGATT+TGG + Chr4:22838236-22838255 MsG0480019588.01.T01:CDS 45.0%
GTGATTCGTCCCTGCAAATA+GGG + Chr4:22839955-22839974 MsG0480019588.01.T01:intron 45.0%
GTGATTCGTCCCTGCAAATA+GGG - Chr4:22839974-22839955 None:intergenic 45.0%
GTTATCACTGACAAAGCCAC+TGG + Chr4:22836067-22836086 MsG0480019588.01.T01:CDS 45.0%
GTTTATGGAAATGGACCAGC+TGG + Chr4:22843096-22843115 MsG0480019588.01.T01:CDS 45.0%
TACACTTCTGGCCAAGGTTA+TGG + Chr4:22843210-22843229 MsG0480019588.01.T01:CDS 45.0%
TCATAGCTAGCTAACCCTAG+AGG + Chr4:22835860-22835879 MsG0480019588.01.T01:five_prime_UTR 45.0%
TCTTTCCAGACAGGATTTGG+AGG + Chr4:22838239-22838258 MsG0480019588.01.T01:CDS 45.0%
TGACGTGGCAGTGATTAAAC+TGG - Chr4:22840066-22840085 None:intergenic 45.0%
TGACTCTCCAAATACTGGAG+AGG - Chr4:22844040-22844059 None:intergenic 45.0%
TGCACCTAAGTTCAACGATC+AGG - Chr4:22843600-22843619 None:intergenic 45.0%
TGTGATTCGTCCCTGCAAAT+AGG + Chr4:22839954-22839973 MsG0480019588.01.T01:intron 45.0%
TGTGATTCGTCCCTGCAAAT+AGG - Chr4:22839973-22839954 None:intergenic 45.0%
TTAAGCGAGCCCTATTTGCA+GGG + Chr4:22840481-22840500 MsG0480019588.01.T01:intron 45.0%
TTAAGCGAGCCCTATTTGCA+GGG - Chr4:22840500-22840481 None:intergenic 45.0%
TTCACTTTGCTCACCAACCA+TGG + Chr4:22844793-22844812 MsG0480019588.01.T01:three_prime_UTR 45.0%
TTGACATGATCGTTGGACTG+AGG + Chr4:22843544-22843563 MsG0480019588.01.T01:intron 45.0%
TTGGCCTGATCGTTGAACTT+AGG + Chr4:22843593-22843612 MsG0480019588.01.T01:intron 45.0%
TTGTACCCTACAGAATGTGG+GGG + Chr4:22841988-22842007 MsG0480019588.01.T01:intron 45.0%
TTTAAGCGAGCCCTATTTGC+AGG + Chr4:22840480-22840499 MsG0480019588.01.T01:intron 45.0%
TTTAAGCGAGCCCTATTTGC+AGG - Chr4:22840499-22840480 None:intergenic 45.0%
TTTGCTCACCAACCATGGTT+AGG + Chr4:22844798-22844817 MsG0480019588.01.T01:three_prime_UTR 45.0%
TTTGGACACCCAAAGAAGCA+AGG - Chr4:22836603-22836622 None:intergenic 45.0%
! ATAAGGTATCCCTTGCTGGA+TGG - Chr4:22838309-22838328 None:intergenic 45.0%
! CTTCTTCTCAAGGTAGTGGT+TGG - Chr4:22835731-22835750 None:intergenic 45.0%
! GGGCCTATGATAATGATGAG+TGG - Chr4:22843996-22844015 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + Chr4:22839180-22839199 MsG0480019588.01.T01:intron 45.0%
!! AGGTAGTGGTTGGTGTGTTT+TGG - Chr4:22835721-22835740 None:intergenic 45.0%
!! ATAGATCTAGGTGATGGGGT+TGG - Chr4:22835789-22835808 None:intergenic 45.0%
!! CAATCCACTGCTTGCTATAG+TGG + Chr4:22842251-22842270 MsG0480019588.01.T01:intron 45.0%
!! CTTTTGGTCATTTGCTGACG+TGG + Chr4:22840367-22840386 MsG0480019588.01.T01:intron 45.0%
!! GATTTGATGGTTGAGTTGGG+AGG - Chr4:22841386-22841405 None:intergenic 45.0%
!! GGCTGATTTGATGGTTGAGT+TGG - Chr4:22841390-22841409 None:intergenic 45.0%
!! GTAATGGGTTCTTTCCAGAC+AGG + Chr4:22838230-22838249 MsG0480019588.01.T01:CDS 45.0%
!!! GCTCTTGTTTTTCTGTGGGA+GGG + Chr4:22837682-22837701 MsG0480019588.01.T01:intron 45.0%
!!! TGCTCTTGTTTTTCTGTGGG+AGG + Chr4:22837681-22837700 MsG0480019588.01.T01:intron 45.0%
!!! TGGTGTGTTTTGGAGATGAG+TGG - Chr4:22835711-22835730 None:intergenic 45.0%
!! AAAAAATCATAAAAAAAAAT+GGG + Chr4:22840264-22840283 MsG0480019588.01.T01:intron 5.0%
!! AAAAATAAAAAAATACAAAA+TGG - Chr4:22836441-22836460 None:intergenic 5.0%
!! AAAAATTAATTAAAACTATT+TGG - Chr4:22840999-22841018 None:intergenic 5.0%
!! ATAACAAATTATTAAAAAAA+GGG + Chr4:22839924-22839943 MsG0480019588.01.T01:intron 5.0%
!! TATAACAAATTATTAAAAAA+AGG + Chr4:22839923-22839942 MsG0480019588.01.T01:intron 5.0%
!! TTATTAAAAAATTAGTTAAA+TGG + Chr4:22841735-22841754 MsG0480019588.01.T01:intron 5.0%
!!! AAAATTAATTAAAACTATTT+TGG - Chr4:22840998-22841017 None:intergenic 5.0%
!!! AAAATTTTGAAATTTTTTTA+AGG - Chr4:22840144-22840163 None:intergenic 5.0%
!!! ATCATTTTTTTATTTTAAAT+CGG - Chr4:22841614-22841633 None:intergenic 5.0%
!!! ATTTTGTATTTTTTTATTTT+TGG + Chr4:22836440-22836459 MsG0480019588.01.T01:intron 5.0%
!!! TATTTATTTTTATTCAAAAT+AGG - Chr4:22841767-22841786 None:intergenic 5.0%
!!! TATTTTATATTTTAAAAATG+AGG + Chr4:22841681-22841700 MsG0480019588.01.T01:intron 5.0%
!!! TTTTTTTAATAATTTGTTAT+AGG - Chr4:22839924-22839943 None:intergenic 5.0%
AAGGTATGGGGTTCGAACCT+CGG + Chr4:22839221-22839240 MsG0480019588.01.T01:intron 50.0%
AATTTGTAGGAGGAGGAGGG+AGG + Chr4:22838198-22838217 MsG0480019588.01.T01:intron 50.0%
AGGACCACTATAGCAAGCAG+TGG - Chr4:22842258-22842277 None:intergenic 50.0%
AGGAGGAGGGAGGAACATTA+GGG + Chr4:22838208-22838227 MsG0480019588.01.T01:CDS 50.0%
AGTTACATCAAGGGGCCATG+TGG - Chr4:22838600-22838619 None:intergenic 50.0%
ATGGAAATGGACCAGCTGGA+GGG + Chr4:22843100-22843119 MsG0480019588.01.T01:CDS 50.0%
CAAGCTCTCATAGCAGCATC+AGG - Chr4:22836535-22836554 None:intergenic 50.0%
CAGACAGGATTTGGAGGAGT+GGG + Chr4:22838245-22838264 MsG0480019588.01.T01:CDS 50.0%
CATTATCATAGGCCCCCCAT+AGG + Chr4:22844001-22844020 MsG0480019588.01.T01:three_prime_UTR 50.0%
CCAACTGAGCTAAGTTCACG+AGG + Chr4:22842658-22842677 MsG0480019588.01.T01:intron 50.0%
CCCCGATTACAGTTACCCTA+CGG + Chr4:22839754-22839773 MsG0480019588.01.T01:CDS 50.0%
CCGTAGGGTAACTGTAATCG+GGG - Chr4:22839757-22839776 None:intergenic 50.0%
CCTCATTATGCCATCCAGCA+AGG + Chr4:22838296-22838315 MsG0480019588.01.T01:CDS 50.0%
CCTCGTGAACTTAGCTCAGT+TGG - Chr4:22842661-22842680 None:intergenic 50.0%
CCTTGCTGGATGGCATAATG+AGG - Chr4:22838299-22838318 None:intergenic 50.0%
CGAAAGGACGAAAATACCCC+TGG + Chr4:22840107-22840126 MsG0480019588.01.T01:intron 50.0%
CGAAAGGACGAAAATACCCC+TGG - Chr4:22840126-22840107 None:intergenic 50.0%
CGTAGGGTAACTGTAATCGG+GGG - Chr4:22839756-22839775 None:intergenic 50.0%
CTCCAATTGCTTCGACTGGT+GGG + Chr4:22843265-22843284 MsG0480019588.01.T01:CDS 50.0%
CTGGATGGCATAATGAGGGA+AGG - Chr4:22838294-22838313 None:intergenic 50.0%
GAGAGAGAGAGAGAATTGGG+AGG - Chr4:22835645-22835664 None:intergenic 50.0%
GTGTGATGAGAGAGACACCA+TGG - Chr4:22843914-22843933 None:intergenic 50.0%
GTTCACCCCCACATTCTGTA+GGG - Chr4:22841996-22842015 None:intergenic 50.0%
TACCCACCAGTCGAAGCAAT+TGG - Chr4:22843270-22843289 None:intergenic 50.0%
TATGGAAATGGACCAGCTGG+AGG + Chr4:22843099-22843118 MsG0480019588.01.T01:CDS 50.0%
TCACACCTCTCTGGATGAAG+AGG + Chr4:22844369-22844388 MsG0480019588.01.T01:three_prime_UTR 50.0%
TCACCAAAATGGCACGCGAA+AGG + Chr4:22840091-22840110 MsG0480019588.01.T01:intron 50.0%
TCTCCAATTGCTTCGACTGG+TGG + Chr4:22843264-22843283 MsG0480019588.01.T01:CDS 50.0%
TGCTGCTATGAGAGCTTGTG+TGG + Chr4:22836537-22836556 MsG0480019588.01.T01:CDS 50.0%
TTATCATAGGCCCCCCATAG+GGG + Chr4:22844003-22844022 MsG0480019588.01.T01:three_prime_UTR 50.0%
! TGGTGTTAACTACCCACCTC+AGG + Chr4:22843230-22843249 MsG0480019588.01.T01:CDS 50.0%
!! AGTGTGTTTTGCTGTGCCAC+AGG + Chr4:22843750-22843769 MsG0480019588.01.T01:intron 50.0%
!! GGTTGAGTTGGGAGGGTTAA+GGG - Chr4:22841378-22841397 None:intergenic 50.0%
!! GTTGAGTTGGGAGGGTTAAG+GGG - Chr4:22841377-22841396 None:intergenic 50.0%
!! TGGTTGAGTTGGGAGGGTTA+AGG - Chr4:22841379-22841398 None:intergenic 50.0%
!!! ACTATTTTTGGTGGTGGCCG+AGG - Chr4:22839241-22839260 None:intergenic 50.0%
AAACCTTTGGGCCCCTATGG+GGG - Chr4:22844017-22844036 None:intergenic 55.0%
ACAGAATGTGGGGGTGAACG+TGG + Chr4:22841997-22842016 MsG0480019588.01.T01:intron 55.0%
AGATCGGGGGTTCAAAACCC+CGG - Chr4:22842614-22842633 None:intergenic 55.0%
AGGAAACCTTTGGGCCCCTA+TGG - Chr4:22844020-22844039 None:intergenic 55.0%
CAATATGGCGAAGGAACCGG+CGG + Chr4:22843171-22843190 MsG0480019588.01.T01:CDS 55.0%
CCAACTGAGCTAAGCTCACG+AGG - Chr4:22839178-22839197 None:intergenic 55.0%
CCACTCCTCCAAATCCTGTC+TGG - Chr4:22838247-22838266 None:intergenic 55.0%
CCAGACAGGATTTGGAGGAG+TGG + Chr4:22838244-22838263 MsG0480019588.01.T01:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + Chr4:22839175-22839194 MsG0480019588.01.T01:intron 55.0%
CGTTCACCCCCACATTCTGT+AGG - Chr4:22841997-22842016 None:intergenic 55.0%
GAAACCTTTGGGCCCCTATG+GGG - Chr4:22844018-22844037 None:intergenic 55.0%
GAGGAGGAGGGAGGAACATT+AGG + Chr4:22838207-22838226 MsG0480019588.01.T01:CDS 55.0%
GCAAGGCATGCTTGCTTGCT+TGG - Chr4:22838525-22838544 None:intergenic 55.0%
GGAAACCTTTGGGCCCCTAT+GGG - Chr4:22844019-22844038 None:intergenic 55.0%
GGTGGGTATGCTCAGCACTA+TGG + Chr4:22843282-22843301 MsG0480019588.01.T01:CDS 55.0%
TAGAGCCATTGTCACGCCTG+TGG - Chr4:22843769-22843788 None:intergenic 55.0%
TCAAGGGGCCATGTGGAATC+AGG - Chr4:22838593-22838612 None:intergenic 55.0%
TGAGGGAAGGTTGCAGCTGA+AGG - Chr4:22838281-22838300 None:intergenic 55.0%
TGGGGGTGAACGTGGTAAGT+CGG + Chr4:22842005-22842024 MsG0480019588.01.T01:intron 55.0%
! TGACCAAAAGGGCACGCGAA+AGG - Chr4:22840357-22840376 None:intergenic 55.0%
!!! CGTCCTTTCGCGTGCCATTT+TGG - Chr4:22840097-22840116 None:intergenic 55.0%
AACCTTTGGGCCCCTATGGG+GGG - Chr4:22844016-22844035 None:intergenic 60.0%
ACTACCGGCGGCTACACTTC+TGG + Chr4:22843198-22843217 MsG0480019588.01.T01:CDS 60.0%
AGAAAACCCGTGCGACGCAC+GGG - Chr4:22837778-22837797 None:intergenic 60.0%
CCAGCTGGAGGGATGATGAC+TGG + Chr4:22843111-22843130 MsG0480019588.01.T01:CDS 60.0%
CCAGTCATCATCCCTCCAGC+TGG - Chr4:22843114-22843133 None:intergenic 60.0%
CTGTGCCACAGGCGTGACAA+TGG + Chr4:22843761-22843780 MsG0480019588.01.T01:CDS 60.0%
GAGAAAACCCGTGCGACGCA+CGG - Chr4:22837779-22837798 None:intergenic 60.0%
GAGTTGGGAGGGTTAAGGGG+TGG - Chr4:22841374-22841393 None:intergenic 60.0%
GATGGCAAGGCAGCAGCAGA+AGG - Chr4:22843327-22843346 None:intergenic 60.0%
GCTGGAGGGATGATGACTGG+TGG + Chr4:22843114-22843133 MsG0480019588.01.T01:CDS 60.0%
TCTGCTGCTGCCTTGCCATC+AGG + Chr4:22843327-22843346 MsG0480019588.01.T01:CDS 60.0%
! CGTCCTTTCGCGTGCCCTTT+TGG + Chr4:22840351-22840370 MsG0480019588.01.T01:intron 60.0%
! CTTTTGACCCGTGCGTCGCA+CGG + Chr4:22837768-22837787 MsG0480019588.01.T01:intron 60.0%
! TTGGCCAGAAGTGTAGCCGC+CGG - Chr4:22843205-22843224 None:intergenic 60.0%
! TTTTGACCCGTGCGTCGCAC+GGG + Chr4:22837769-22837788 MsG0480019588.01.T01:intron 60.0%
GGAACCGGCGGTGCAACTAC+CGG + Chr4:22843183-22843202 MsG0480019588.01.T01:CDS 65.0%
GGCGGCTACACTTCTGGCCA+AGG + Chr4:22843204-22843223 MsG0480019588.01.T01:CDS 65.0%
ACCGGCGGTGCAACTACCGG+CGG + Chr4:22843186-22843205 MsG0480019588.01.T01:CDS 70.0%
GCCGCCGGTAGTTGCACCGC+CGG - Chr4:22843190-22843209 None:intergenic 75.0%
GGCCCCCCATAGGGGCCCAA+AGG + Chr4:22844011-22844030 MsG0480019588.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 22835603 22845154 22835603 ID=MsG0480019588.01;Name=MsG0480019588.01
Chr4 mRNA 22835603 22845154 22835603 ID=MsG0480019588.01.T01;Parent=MsG0480019588.01;Name=MsG0480019588.01.T01;_AED=0.37;_eAED=0.37;_QI=326|0.8|0.83|1|0.8|0.66|6|1342|295
Chr4 exon 22835603 22836111 22835603 ID=MsG0480019588.01.T01:exon:10715;Parent=MsG0480019588.01.T01
Chr4 exon 22836517 22836649 22836517 ID=MsG0480019588.01.T01:exon:10716;Parent=MsG0480019588.01.T01
Chr4 exon 22838207 22838339 22838207 ID=MsG0480019588.01.T01:exon:10717;Parent=MsG0480019588.01.T01
Chr4 exon 22839739 22839775 22839739 ID=MsG0480019588.01.T01:exon:10718;Parent=MsG0480019588.01.T01
Chr4 exon 22843054 22843394 22843054 ID=MsG0480019588.01.T01:exon:10719;Parent=MsG0480019588.01.T01
Chr4 exon 22843752 22845154 22843752 ID=MsG0480019588.01.T01:exon:10720;Parent=MsG0480019588.01.T01
Chr4 five_prime_UTR 22835603 22835928 22835603 ID=MsG0480019588.01.T01:five_prime_utr;Parent=MsG0480019588.01.T01
Chr4 CDS 22835929 22836111 22835929 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 CDS 22836517 22836649 22836517 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 CDS 22838207 22838339 22838207 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 CDS 22839739 22839775 22839739 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 CDS 22843054 22843394 22843054 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 CDS 22843752 22843812 22843752 ID=MsG0480019588.01.T01:cds;Parent=MsG0480019588.01.T01
Chr4 three_prime_UTR 22843813 22845154 22843813 ID=MsG0480019588.01.T01:three_prime_utr;Parent=MsG0480019588.01.T01
Gene Sequence

>MsG0480019588.01.T01

ATGACTCCAATTAATTTGGCAGGACAATTTGGTGACACAACATACACCAAAGTTTTTGTTGGAGGATTAGCTTGGGAAACTCAAAAAGAGACCATGAAGAAGTATTTTGAGCAATTTGGTGAGATCTTGGAAGCTGTTGTTATCACTGACAAAGCCACTGGAAGATCCAAAGGCTATGGATTTGTCACTTTTCGTGAACCTGATGCTGCTATGAGAGCTTGTGTGGATGCTGCTCCTATAATTGATGGTAGGAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAAAGATCTAAGCCTTCAACACCAAAACATGGAGGAGGAGGGAGGAACATTAGGGTAATGGGTTCTTTCCAGACAGGATTTGGAGGAGTGGGATCAGCTTTTCCTTCAGCTGCAACCTTCCCTCATTATGCCATCCAGCAAGGGATACCTTATAATGTTTATGGGTACTCTTCTTACTCCCCCGATTACAGTTACCCTACGAGCTACTATGGTATGTACGGTGGGGCAACAGCACAGTATCCTGTTTATGGAAATGGACCAGCTGGAGGGATGATGACTGGTGGTGCAGCAGCAGCAGCAGCCTACTACCCATATCTTCAATATGGCGAAGGAACCGGCGGTGCAACTACCGGCGGCTACACTTCTGGCCAAGGTTATGGTGTTAACTACCCACCTCAGGTGTTTCAATATTCTCCAATTGCTTCGACTGGTGGGTATGCTCAGCACTATGGAACACCCATTTCTCTTGCTCCTTCTGCTGCTGCCTTGCCATCAGGTTTCTACTTCTCACTATACTCTCATAATCATGGTTTTAAATTAGGTGTGTTTTGCTGTGCCACAGGCGTGACAATGGCTCTACAAGCTCCAATTCCTCATCGTTAG
Protein sequence

>MsG0480019588.01.T01

MTPINLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPIIDGRRANCNLASLGVQRSKPSTPKHGGGGRNIRVMGSFQTGFGGVGSAFPSAATFPHYAIQQGIPYNVYGYSSYSPDYSYPTSYYGMYGGATAQYPVYGNGPAGGMMTGGAAAAAAYYPYLQYGEGTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGGYAQHYGTPISLAPSAAALPSGFYFSLYSHNHGFKLGVFCCATGVTMALQAPIPHR*