AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038810.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038810.01.T01 MTR_7g062540 90.462 671 30 1 1 671 1 637 0.0 1240
MsG0780038810.01.T01 MTR_4g021580 66.365 663 161 9 13 671 18 622 0.0 819
MsG0780038810.01.T01 MTR_4g021580 66.365 663 161 9 13 671 18 622 0.0 817
MsG0780038810.01.T01 MTR_8g027440 52.655 678 230 12 9 671 24 625 0.0 657
MsG0780038810.01.T01 MTR_2g005240 68.508 362 108 4 9 367 18 376 3.61e-173 510
MsG0780038810.01.T01 MTR_2g005240 41.875 160 79 6 519 670 461 614 4.89e-25 110
MsG0780038810.01.T01 MTR_8g100050 63.085 363 125 6 8 365 53 411 1.72e-152 459
MsG0780038810.01.T01 MTR_8g100050 63.085 363 125 6 8 365 53 411 2.20e-151 459
MsG0780038810.01.T01 MTR_8g100050 37.079 178 91 6 512 670 602 777 5.28e-22 101
MsG0780038810.01.T01 MTR_2g018690 49.465 374 179 8 6 373 15 384 4.75e-107 345
MsG0780038810.01.T01 MTR_2g093740 46.927 358 174 6 12 355 54 409 1.95e-106 338
MsG0780038810.01.T01 MTR_2g093740 46.927 358 174 6 12 355 54 409 9.09e-106 338
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 682 749 1.78e-17 87.0
MsG0780038810.01.T01 MTR_2g093740 46.927 358 174 6 12 355 54 409 3.12e-105 338
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 682 749 1.98e-17 87.0
MsG0780038810.01.T01 MTR_8g079492 48.806 377 176 8 6 373 15 383 3.87e-105 340
MsG0780038810.01.T01 MTR_8g079492 48.806 377 176 8 6 373 15 383 4.43e-105 340
MsG0780038810.01.T01 MTR_5g076270 50.144 347 165 6 6 346 16 360 1.52e-104 337
MsG0780038810.01.T01 MTR_3g064050 50.292 342 162 6 11 346 23 362 7.04e-104 335
MsG0780038810.01.T01 MTR_4g060460 45.528 369 182 7 12 365 52 416 7.23e-104 334
MsG0780038810.01.T01 MTR_4g060460 43.103 116 60 3 561 670 615 730 2.57e-19 93.2
MsG0780038810.01.T01 MTR_4g060460 45.528 369 182 7 12 365 52 416 7.96e-104 334
MsG0780038810.01.T01 MTR_4g060460 43.103 116 60 3 561 670 610 725 2.69e-19 93.2
MsG0780038810.01.T01 MTR_4g088210 45.669 381 174 8 14 373 38 406 1.41e-102 328
MsG0780038810.01.T01 MTR_2g093740 45.283 371 174 7 12 355 54 422 1.69e-102 328
MsG0780038810.01.T01 MTR_4g088210 45.669 381 174 8 14 373 38 406 2.93e-102 328
MsG0780038810.01.T01 MTR_2g093740 45.283 371 174 7 12 355 54 422 6.55e-102 328
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 695 762 1.95e-17 87.0
MsG0780038810.01.T01 MTR_2g093740 45.283 371 174 7 12 355 54 422 1.64e-101 328
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 695 762 2.09e-17 87.0
MsG0780038810.01.T01 MTR_2g014770 35.552 571 304 15 14 537 53 606 9.39e-95 305
MsG0780038810.01.T01 MTR_2g014770 45.082 366 178 7 14 366 53 408 8.57e-93 302
MsG0780038810.01.T01 MTR_1g024025 46.705 349 179 5 1 344 30 376 3.87e-92 311
MsG0780038810.01.T01 MTR_4g124900 43.750 416 212 11 6 412 15 417 2.94e-89 301
MsG0780038810.01.T01 MTR_4g124900 46.377 69 34 2 604 670 970 1037 1.72e-12 71.2
MsG0780038810.01.T01 MTR_4g124900 44.231 416 210 12 6 412 15 417 3.52e-89 301
MsG0780038810.01.T01 MTR_4g124900 46.377 69 34 2 604 670 993 1060 1.72e-12 71.2
MsG0780038810.01.T01 MTR_2g043250 46.839 348 175 7 6 347 15 358 7.70e-88 297
MsG0780038810.01.T01 MTR_2g043250 44.928 69 35 2 604 670 986 1053 1.12e-11 68.9
MsG0780038810.01.T01 MTR_8g101360 46.334 341 175 6 14 348 31 369 1.11e-83 286
MsG0780038810.01.T01 MTR_8g101360 46.377 69 34 2 604 670 984 1051 2.55e-12 70.9
MsG0780038810.01.T01 MTR_8g079492 48.860 307 140 8 76 373 3 301 2.98e-80 272
MsG0780038810.01.T01 MTR_2g093740 49.004 251 124 3 108 355 30 279 1.42e-77 260
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 552 619 1.45e-17 87.0
MsG0780038810.01.T01 MTR_2g093740 49.004 251 124 3 108 355 30 279 3.29e-77 260
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 552 619 1.57e-17 87.0
MsG0780038810.01.T01 MTR_2g093740 46.591 264 124 4 108 355 30 292 7.25e-74 250
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 565 632 1.74e-17 87.0
MsG0780038810.01.T01 MTR_2g093740 46.591 264 124 4 108 355 30 292 1.60e-73 251
MsG0780038810.01.T01 MTR_2g093740 55.882 68 29 1 604 670 565 632 1.89e-17 87.0
MsG0780038810.01.T01 MTR_2g094570 37.101 407 207 9 8 373 5 403 1.70e-69 239
MsG0780038810.01.T01 MTR_2g094570 37.101 407 207 9 8 373 5 403 1.83e-69 240
MsG0780038810.01.T01 MTR_2g094570 37.101 407 207 9 8 373 61 459 6.29e-69 239
MsG0780038810.01.T01 MTR_8g446900 39.938 323 178 8 55 372 2 313 3.79e-68 228
MsG0780038810.01.T01 MTR_4g058930 35.240 437 222 12 3 389 1 426 8.96e-67 232
MsG0780038810.01.T01 MTR_4g058930 35.240 437 222 12 3 389 1 426 1.48e-66 232
MsG0780038810.01.T01 MTR_7g101280 33.488 430 224 12 14 390 31 451 2.79e-62 219
MsG0780038810.01.T01 MTR_0041s0110 33.488 430 224 12 14 390 31 451 2.79e-62 219
MsG0780038810.01.T01 MTR_1g094960 35.437 412 209 12 3 369 8 407 2.16e-60 213
MsG0780038810.01.T01 MTR_3g073420 34.217 415 222 11 11 385 16 419 4.85e-58 206
MsG0780038810.01.T01 MTR_5g040880 35.174 344 193 8 13 346 10 333 2.77e-56 200
MsG0780038810.01.T01 MTR_5g061220 32.216 388 215 11 14 369 19 390 6.26e-54 194
MsG0780038810.01.T01 MTR_7g101275 37.582 306 178 7 24 323 2 300 2.22e-53 189
MsG0780038810.01.T01 MTR_5g082140 32.162 370 227 7 3 363 1 355 2.47e-52 187
MsG0780038810.01.T01 MTR_2g024430 33.425 365 203 13 14 363 20 359 1.31e-49 181
MsG0780038810.01.T01 MTR_1g064430 45.894 207 102 3 14 215 27 228 5.00e-49 183
MsG0780038810.01.T01 MTR_1g064430 45.894 207 102 3 14 215 40 241 5.83e-49 183
MsG0780038810.01.T01 MTR_1g058210 31.564 358 228 9 14 366 12 357 1.34e-47 174
MsG0780038810.01.T01 MTR_0041s0120 33.333 321 183 9 24 323 2 312 1.16e-42 159
MsG0780038810.01.T01 MTR_5g040740 33.133 332 174 11 14 325 12 315 5.53e-42 157
MsG0780038810.01.T01 MTR_5g060780 29.722 360 229 11 14 366 12 354 1.88e-38 147
MsG0780038810.01.T01 MTR_5g460920 29.834 362 226 13 14 366 12 354 8.73e-38 145
MsG0780038810.01.T01 MTR_2g006270 30.084 359 225 9 14 363 13 354 1.15e-37 146
MsG0780038810.01.T01 MTR_5g061890 29.248 359 232 9 14 366 12 354 3.71e-37 144
MsG0780038810.01.T01 MTR_2g006380 28.463 397 235 14 11 388 17 383 6.22e-37 144
MsG0780038810.01.T01 MTR_5g060630 27.344 384 229 12 14 357 12 385 3.04e-35 140
MsG0780038810.01.T01 MTR_5g460740 27.344 384 229 12 14 357 12 385 3.04e-35 140
MsG0780038810.01.T01 MTR_5g062970 34.951 206 126 3 14 216 38 238 3.00e-34 131
MsG0780038810.01.T01 MTR_3g064050 48.819 127 59 4 224 346 1 125 1.49e-25 112
MsG0780038810.01.T01 MTR_5g074840 52.222 90 41 1 178 265 58 147 3.48e-20 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038810.01.T01 AT4G23980 53.630 675 221 16 2 671 1 588 0.0 630
MsG0780038810.01.T01 AT4G23980 53.333 675 225 16 2 671 1 590 0.0 629
MsG0780038810.01.T01 AT3G61830 70.637 361 101 3 8 365 19 377 0.0 534
MsG0780038810.01.T01 AT3G61830 49.315 146 43 5 527 670 439 555 1.82e-29 124
MsG0780038810.01.T01 AT2G46530 71.038 366 100 4 8 370 15 377 0.0 533
MsG0780038810.01.T01 AT2G46530 43.976 166 70 5 507 670 412 556 1.77e-28 121
MsG0780038810.01.T01 AT2G46530 71.038 366 100 4 8 370 36 398 0.0 533
MsG0780038810.01.T01 AT2G46530 43.976 166 70 5 507 670 433 577 1.96e-28 121
MsG0780038810.01.T01 AT1G59750 57.339 436 151 6 9 411 17 450 8.27e-166 491
MsG0780038810.01.T01 AT1G59750 42.073 164 73 7 519 670 451 604 1.14e-24 109
MsG0780038810.01.T01 AT1G59750 57.078 438 151 6 9 411 17 452 1.94e-165 490
MsG0780038810.01.T01 AT1G59750 42.073 164 73 7 519 670 453 606 1.11e-24 109
MsG0780038810.01.T01 AT1G59750 65.014 363 121 4 9 367 17 377 5.45e-165 489
MsG0780038810.01.T01 AT1G59750 42.073 164 73 7 519 670 456 609 1.25e-24 109
MsG0780038810.01.T01 AT1G59750 65.014 363 121 4 9 367 17 377 5.45e-165 489
MsG0780038810.01.T01 AT1G59750 42.073 164 73 7 519 670 456 609 1.25e-24 109
MsG0780038810.01.T01 AT3G61830 70.122 328 93 3 41 365 1 326 5.24e-161 474
MsG0780038810.01.T01 AT3G61830 49.315 146 43 5 527 670 388 504 1.25e-29 124
MsG0780038810.01.T01 AT5G62000 63.361 363 124 6 8 365 55 413 1.78e-158 478
MsG0780038810.01.T01 AT5G62000 34.536 194 106 6 496 670 609 800 2.59e-26 115
MsG0780038810.01.T01 AT5G62000 63.361 363 124 6 8 365 55 413 1.78e-158 478
MsG0780038810.01.T01 AT5G62000 34.536 194 106 6 496 670 609 800 2.59e-26 115
MsG0780038810.01.T01 AT5G62000 63.361 363 124 6 8 365 55 413 1.78e-158 478
MsG0780038810.01.T01 AT5G62000 34.536 194 106 6 496 670 609 800 2.59e-26 115
MsG0780038810.01.T01 AT5G62000 63.361 363 124 6 8 365 55 413 1.78e-158 478
MsG0780038810.01.T01 AT5G62000 34.536 194 106 6 496 670 609 800 2.59e-26 115
MsG0780038810.01.T01 AT5G62000 63.361 363 124 6 8 365 55 413 2.94e-158 478
MsG0780038810.01.T01 AT5G62000 34.536 194 106 6 496 670 609 800 2.49e-26 115
MsG0780038810.01.T01 AT1G34410 51.058 378 174 5 5 381 18 385 2.68e-132 402
MsG0780038810.01.T01 AT1G34410 41.410 227 98 6 453 671 379 578 1.90e-37 148
MsG0780038810.01.T01 AT2G46530 68.858 289 83 4 86 370 5 290 2.78e-132 399
MsG0780038810.01.T01 AT2G46530 43.976 166 70 5 507 670 325 469 6.79e-29 121
MsG0780038810.01.T01 AT1G35240 51.475 373 170 5 5 376 18 380 2.55e-131 400
MsG0780038810.01.T01 AT1G35240 43.590 195 78 5 482 671 397 564 1.40e-35 142
MsG0780038810.01.T01 AT1G35540 50.398 377 178 4 5 381 18 385 2.15e-130 398
MsG0780038810.01.T01 AT1G35540 40.260 231 100 9 450 671 376 577 4.56e-36 144
MsG0780038810.01.T01 AT1G34310 51.323 378 173 5 5 381 18 385 1.03e-129 395
MsG0780038810.01.T01 AT1G34310 39.035 228 108 7 450 671 376 578 9.81e-35 140
MsG0780038810.01.T01 AT1G35520 51.613 372 169 5 11 381 24 385 1.02e-128 393
MsG0780038810.01.T01 AT1G35520 40.088 227 101 6 453 671 379 578 4.97e-36 144
MsG0780038810.01.T01 AT1G34390 51.852 378 169 6 5 381 18 383 4.97e-125 384
MsG0780038810.01.T01 AT1G34390 39.035 228 108 6 450 671 374 576 6.51e-35 140
MsG0780038810.01.T01 AT1G34170 48.767 365 164 5 2 350 1 358 4.68e-119 365
MsG0780038810.01.T01 AT5G37020 49.857 349 165 7 6 346 12 358 4.14e-105 337
MsG0780038810.01.T01 AT5G37020 32.639 144 84 6 530 670 639 772 6.23e-11 66.2
MsG0780038810.01.T01 AT1G30330 49.867 377 173 10 6 373 17 386 8.47e-105 340
MsG0780038810.01.T01 AT1G30330 49.867 377 173 10 6 373 17 386 8.47e-105 340
MsG0780038810.01.T01 AT1G30330 49.867 377 173 10 6 373 15 384 1.13e-104 340
MsG0780038810.01.T01 AT5G37020 49.857 349 165 7 6 346 12 358 1.32e-104 337
MsG0780038810.01.T01 AT5G37020 32.639 144 84 6 530 670 639 772 5.80e-11 66.2
MsG0780038810.01.T01 AT1G34170 45.753 365 149 6 2 350 1 332 3.94e-104 325
MsG0780038810.01.T01 AT1G34170 45.753 365 149 6 2 350 1 332 4.58e-103 325
MsG0780038810.01.T01 AT1G34170 69.231 65 20 0 607 671 436 500 1.04e-22 103
MsG0780038810.01.T01 AT5G60450 45.889 377 183 10 3 364 30 400 4.22e-100 323
MsG0780038810.01.T01 AT5G60450 50.602 83 40 1 589 670 626 708 5.25e-20 95.5
MsG0780038810.01.T01 AT5G60450 46.612 369 176 10 11 364 62 424 7.45e-99 321
MsG0780038810.01.T01 AT5G60450 50.602 83 40 1 589 670 650 732 6.33e-20 95.1
MsG0780038810.01.T01 AT1G19850 47.941 340 163 7 14 344 43 377 5.39e-94 310
MsG0780038810.01.T01 AT1G19850 47.941 340 163 7 14 344 54 388 5.47e-94 310
MsG0780038810.01.T01 AT2G33860 44.928 345 168 7 14 345 54 389 3.45e-92 298
MsG0780038810.01.T01 AT5G20730 45.902 366 186 8 6 366 16 374 9.66e-88 298
MsG0780038810.01.T01 AT5G20730 44.928 69 35 3 604 670 1037 1104 3.27e-11 67.4
MsG0780038810.01.T01 AT5G20730 45.777 367 186 8 6 366 16 375 1.83e-87 297
MsG0780038810.01.T01 AT5G20730 44.928 69 35 3 604 670 1038 1105 3.33e-11 67.4
MsG0780038810.01.T01 AT5G20730 45.777 367 186 8 6 366 16 375 2.42e-87 296
MsG0780038810.01.T01 AT5G20730 44.928 69 35 3 604 670 1038 1105 3.23e-11 67.4
MsG0780038810.01.T01 AT1G19220 45.600 375 190 9 4 369 13 382 3.68e-87 295
MsG0780038810.01.T01 AT1G19220 45.000 80 37 3 593 670 951 1025 2.36e-13 74.3
MsG0780038810.01.T01 AT5G37020 48.057 283 134 6 108 380 23 302 4.09e-74 253
MsG0780038810.01.T01 AT5G37020 26.383 235 131 8 468 670 453 677 4.31e-11 66.6
MsG0780038810.01.T01 AT1G43950 53.302 212 91 4 5 215 18 222 4.81e-70 227
MsG0780038810.01.T01 AT2G33860 48.069 233 116 3 116 345 2 232 5.62e-68 229
MsG0780038810.01.T01 AT4G30080 35.122 410 213 10 3 367 8 409 4.73e-65 227
MsG0780038810.01.T01 AT2G28350 36.829 410 201 10 7 367 3 403 4.86e-65 227
MsG0780038810.01.T01 AT2G28350 36.829 410 201 10 7 367 3 403 5.63e-65 228
MsG0780038810.01.T01 AT1G77850 31.421 401 214 13 10 365 15 399 4.45e-50 184
MsG0780038810.01.T01 AT1G77850 31.421 401 214 13 10 365 15 399 5.77e-50 184

Find 158 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTGACGTTCCAGATTT+TGG 0.157571 7:+53420124 MsG0780038810.01.T01:CDS
GACTTTACTTACTGGGAAAA+TGG 0.161877 7:+53420371 MsG0780038810.01.T01:CDS
TTGAGATATCAAACTTATTT+TGG 0.174168 7:-53420844 None:intergenic
ATGCCTTCATCTGTGATTTC+TGG 0.218236 7:+53419219 MsG0780038810.01.T01:CDS
AGATCCATCCTAGGAATAAA+TGG 0.234682 7:+53421241 MsG0780038810.01.T01:CDS
CACACTGGTTGAATTCAAAA+TGG 0.280634 7:+53419859 MsG0780038810.01.T01:CDS
TGGTAAGGAAGCGGAATATT+TGG 0.283179 7:+53420144 MsG0780038810.01.T01:CDS
CTCCTGCTGCAAAATATAAA+AGG 0.298744 7:+53420092 MsG0780038810.01.T01:CDS
TCCGCTTCCTTACCAAAATC+TGG 0.302105 7:-53420136 None:intergenic
TTGCTGAAGGAGTGAGTTCT+TGG 0.304040 7:-53418320 None:intergenic
GCTACAAGCTGTAGATTGTT+TGG 0.318630 7:+53420704 MsG0780038810.01.T01:CDS
TATAAGTGTGAATAAGTATA+TGG 0.342092 7:+53419426 MsG0780038810.01.T01:CDS
CAGTAGGTGACTTTACTTAC+TGG 0.344464 7:+53420363 MsG0780038810.01.T01:CDS
CTACAAGCTGTAGATTGTTT+GGG 0.348679 7:+53420705 MsG0780038810.01.T01:CDS
TGCTTGCTTTGTGTTTCATT+TGG 0.354289 7:-53420908 None:intergenic
AAGGAGTGAGTTCTTGGTCT+TGG 0.354402 7:-53418314 None:intergenic
CTTAGTGCAACTTCTGCTAT+TGG 0.357778 7:-53420933 None:intergenic
ATTCCTGAGTTGGAGTAGAT+TGG 0.370432 7:-53418532 None:intergenic
CGTCGACACTTGCTCACAAC+TGG 0.370955 7:+53418951 MsG0780038810.01.T01:CDS
ACAATTTCCCATTTATTCCT+AGG 0.375607 7:-53421249 None:intergenic
TACATCCTTACATTAGATTC+TGG 0.379009 7:-53418162 None:intergenic
ATCTACTCCAACTCAGGAAT+TGG 0.380361 7:+53418535 MsG0780038810.01.T01:CDS
TATATTCTCATCAGGTTCAA+TGG 0.382829 7:+53419981 MsG0780038810.01.T01:intron
GAGTATGCAGCAAATGTATT+TGG 0.391054 7:+53420770 MsG0780038810.01.T01:CDS
TGTTGTCAATGTTCATTTGC+TGG 0.395894 7:+53417648 MsG0780038810.01.T01:CDS
TATTCACACTTATAATGAAC+TGG 0.400736 7:-53419417 None:intergenic
CTTGGTCTTGGAGGTTCAGC+AGG 0.401899 7:-53418302 None:intergenic
CTTAGTAGGGTTAGACTTAG+TGG 0.401987 7:+53420281 MsG0780038810.01.T01:CDS
TCCCATGGTGAAATTCTATC+AGG 0.415551 7:-53420028 None:intergenic
TGTAGCTGACCTCCCTTAGT+AGG 0.420388 7:+53420267 MsG0780038810.01.T01:intron
GTTAGAAGTATCAACAAATC+AGG 0.423287 7:+53417573 MsG0780038810.01.T01:intron
GGACAAGGATCAAGGCTTGT+AGG 0.425783 7:-53418281 None:intergenic
CAATGATCATTTGACTGATC+AGG 0.428654 7:+53420655 MsG0780038810.01.T01:CDS
AGACTTAGTGGCGTTATACT+TGG 0.432759 7:+53420293 MsG0780038810.01.T01:CDS
ATGAACTCTATGAACAGTTA+TGG 0.434802 7:+53417288 MsG0780038810.01.T01:CDS
GAGTGAGTTCTTGGTCTTGG+AGG 0.436921 7:-53418311 None:intergenic
TTCCTGAGTTGGAGTAGATT+GGG 0.444751 7:-53418531 None:intergenic
GATGAAGGCATGCAGCTTTG+TGG 0.446909 7:-53419207 None:intergenic
TGTAAGGAAACGGCGTTTGT+TGG 0.447663 7:-53416981 None:intergenic
TGTGTTTCATTTGGAGATAT+CGG 0.452653 7:-53420899 None:intergenic
CACTAAGTCTAACCCTACTA+AGG 0.455262 7:-53420280 None:intergenic
CACTTTAAGCATATATTTCG+AGG 0.457499 7:+53418587 MsG0780038810.01.T01:CDS
TGGTCCTTCTCATTTGTGTC+AGG 0.459330 7:+53420556 MsG0780038810.01.T01:CDS
ACTTTACTTACTGGGAAAAT+GGG 0.460269 7:+53420372 MsG0780038810.01.T01:CDS
GGAATGACGGTATGCATTTG+TGG 0.463307 7:+53420447 MsG0780038810.01.T01:CDS
AGCACAATGATGATGAATAA+TGG 0.463577 7:+53417257 MsG0780038810.01.T01:exon
GCTGCATACTCGGACACCTT+AGG 0.463588 7:-53420758 None:intergenic
GGTGAAATTCTATCAGGTCT+TGG 0.465108 7:-53420022 None:intergenic
CGTAGGAGCAGAAGCCAGAA+GGG 0.466622 7:-53420059 None:intergenic
CACTGAATGTCTTCCCTCAC+TGG 0.466631 7:+53418403 MsG0780038810.01.T01:CDS
AGAGAAGCTGTTTGACATGA+AGG 0.473975 7:+53421215 MsG0780038810.01.T01:CDS
CCAAAATCTGGAACGTCACT+AGG 0.476389 7:-53420124 None:intergenic
AACTCAGGAATTGGTTGCTA+AGG 0.479871 7:+53418544 MsG0780038810.01.T01:CDS
ATATTCTCATCAGGTTCAAT+GGG 0.480064 7:+53419982 MsG0780038810.01.T01:intron
TCAAATGCAGGGTGTTGCAG+TGG 0.481218 7:+53421137 MsG0780038810.01.T01:CDS
AACACGACAAAGGATCTTGT+TGG 0.481262 7:-53417629 None:intergenic
ATGGGAGATAGAACCCCTTC+TGG 0.482103 7:+53420045 MsG0780038810.01.T01:CDS
ATGTTATGTCTGAAAACATA+AGG 0.482213 7:+53420426 MsG0780038810.01.T01:CDS
GTGAAAAGTGAAAAGTGAAA+AGG 0.483513 7:+53417221 MsG0780038810.01.T01:five_prime_UTR
TTTCCCATTTATTCCTAGGA+TGG 0.483618 7:-53421245 None:intergenic
CATGTTGAAGTTCCTCGTGC+TGG 0.488356 7:+53417329 MsG0780038810.01.T01:CDS
TTAGCAACCAATTCCTGAGT+TGG 0.491444 7:-53418542 None:intergenic
CTGTCAAAAGGTTCAAATGC+AGG 0.492047 7:+53421125 MsG0780038810.01.T01:intron
GATCCATCCTAGGAATAAAT+GGG 0.495100 7:+53421242 MsG0780038810.01.T01:CDS
TTGTCATCATCATCATGTAC+TGG 0.498888 7:-53417144 None:intergenic
GGAATCTGACTGACGGAAGT+TGG 0.500296 7:+53420513 MsG0780038810.01.T01:CDS
ACACGACAAAGGATCTTGTT+GGG 0.504393 7:-53417628 None:intergenic
AAATACATTTGCTGCATACT+CGG 0.507640 7:-53420768 None:intergenic
CTGCAAAATATAAAAGGCCT+AGG 0.510234 7:+53420098 MsG0780038810.01.T01:CDS
GTCCCAATCTACTCCAACTC+AGG 0.512152 7:+53418529 MsG0780038810.01.T01:CDS
GTCTGCATCAGTTCTTGACA+TGG 0.513254 7:-53420822 None:intergenic
TCTCAAAGGCTTCAAAAGAA+AGG 0.513575 7:+53420861 MsG0780038810.01.T01:CDS
CAGCATGAGACGCGGTTGCA+AGG 0.515240 7:-53419263 None:intergenic
TAGCAAGAGTGTCGCAGTCT+CGG 0.516524 7:+53420592 MsG0780038810.01.T01:CDS
AGTAGGTGACTTTACTTACT+GGG 0.516997 7:+53420364 MsG0780038810.01.T01:CDS
TGTTGCAGTGGGTCGTGCGG+TGG 0.520688 7:+53421149 MsG0780038810.01.T01:CDS
AACTCTGATACAAGTACTCA+TGG 0.524293 7:+53418353 MsG0780038810.01.T01:CDS
GTTCAGCAGGACAAGGATCA+AGG 0.528735 7:-53418289 None:intergenic
ATTGTCTTCACTGATGATGA+AGG 0.528983 7:+53421267 MsG0780038810.01.T01:CDS
TGACCAGAAATCACAGATGA+AGG 0.529054 7:-53419222 None:intergenic
TTGTAGTATACTACAAGCCC+AGG 0.533426 7:+53419304 MsG0780038810.01.T01:CDS
TAAAGAGATACTCACGGCCA+TGG 0.533691 7:-53421315 None:intergenic
AGGATCTTCACAATTATGAA+TGG 0.534136 7:+53418564 MsG0780038810.01.T01:CDS
ATTATTAACTTGTATTACAT+CGG 0.535796 7:-53420405 None:intergenic
GAAGGGGATATGATGCTTGT+TGG 0.542834 7:+53421285 MsG0780038810.01.T01:CDS
GAGAAGCTGTTTGACATGAA+GGG 0.548993 7:+53421216 MsG0780038810.01.T01:CDS
AGAGTGTCGCAGTCTCGGCT+TGG 0.549847 7:+53420597 MsG0780038810.01.T01:CDS
GATGGTGTTATTACCAGTGA+GGG 0.550345 7:-53418416 None:intergenic
AGAGTTATATTTGATCAAAG+TGG 0.551737 7:+53417199 MsG0780038810.01.T01:five_prime_UTR
GAGATACGTTTGTGTTTCTG+AGG 0.554208 7:+53419012 MsG0780038810.01.T01:CDS
TCGTAGGAGCAGAAGCCAGA+AGG 0.562413 7:-53420060 None:intergenic
CTATCTTCTCCTCATTCAAG+TGG 0.562928 7:+53420536 MsG0780038810.01.T01:CDS
GACACTTGCTCACAACTGGA+TGG 0.564774 7:+53418955 MsG0780038810.01.T01:CDS
GAGAATTACGCGTTGGCGTG+AGG 0.565139 7:+53419172 MsG0780038810.01.T01:CDS
TTTGACTGATCAGGTTGTCA+AGG 0.566250 7:+53420664 MsG0780038810.01.T01:CDS
CAATAGCAGAAGTTGCACTA+AGG 0.566869 7:+53420934 MsG0780038810.01.T01:CDS
TGGCACAATAATTGGACAAG+AGG 0.567142 7:+53419827 MsG0780038810.01.T01:CDS
TTGTCTTCACTGATGATGAA+GGG 0.569768 7:+53421268 MsG0780038810.01.T01:CDS
GTAGCTGACCTCCCTTAGTA+GGG 0.571775 7:+53420268 MsG0780038810.01.T01:intron
CTTGGAGGTTCAGCAGGACA+AGG 0.574769 7:-53418296 None:intergenic
TTCAAAATGGAGATCACTCA+AGG 0.575917 7:+53419872 MsG0780038810.01.T01:CDS
GTTAGTTAAGACCTTGCTGA+AGG 0.576070 7:-53418333 None:intergenic
TGAAGGGACAGATCCATCCT+AGG 0.576311 7:+53421232 MsG0780038810.01.T01:CDS
ACGCGGTTGCAAGGACTCCA+AGG 0.576436 7:-53419254 None:intergenic
ACTGATAATAGCAGCAGCAA+TGG 0.577521 7:+53420482 MsG0780038810.01.T01:CDS
GGAACGTCACTAGGTAGCCT+AGG 0.578373 7:-53420115 None:intergenic
GGTTGTCAAGGAGAACAAAA+CGG 0.580030 7:+53420676 MsG0780038810.01.T01:CDS
TGAGAAGGACCACTTGAATG+AGG 0.580259 7:-53420545 None:intergenic
ATTCTCCTGAGACTGACAAA+AGG 0.581364 7:+53419509 MsG0780038810.01.T01:CDS
CACAATGGAGAATTACGCGT+TGG 0.583091 7:+53419165 MsG0780038810.01.T01:CDS
TCCTCGCACGAACACTCCTA+AGG 0.585464 7:+53420742 MsG0780038810.01.T01:CDS
GTGGACTTGACCGCGTTGGA+TGG 0.587025 7:+53421168 MsG0780038810.01.T01:CDS
CAAATGCAGGGTGTTGCAGT+GGG 0.591983 7:+53421138 MsG0780038810.01.T01:CDS
TTGTTGGGAAGTTTGAACAA+TGG 0.592548 7:-53417613 None:intergenic
GTATTTGGAGTCACCTCTGA+GGG 0.593824 7:+53420785 MsG0780038810.01.T01:CDS
ATCAGTTCTTGACATGGGAG+CGG 0.595334 7:-53420816 None:intergenic
GCAGGAGGTTGAATAGTCGT+AGG 0.595409 7:-53420076 None:intergenic
TGTCAAAAGGTTCAAATGCA+GGG 0.595922 7:+53421126 MsG0780038810.01.T01:intron
TCTGCATCAGTTCTTGACAT+GGG 0.598480 7:-53420821 None:intergenic
AAATAAGTTTGATATCTCAA+AGG 0.603379 7:+53420847 MsG0780038810.01.T01:CDS
TGCTTGTTGGTGATGATCCA+TGG 0.605617 7:+53421298 MsG0780038810.01.T01:CDS
AAGAGGATATTTCTTCACAC+TGG 0.605848 7:+53419844 MsG0780038810.01.T01:CDS
TGTCTTCACTGATGATGAAG+GGG 0.610189 7:+53421269 MsG0780038810.01.T01:CDS
ACCTGATAGAATTTCACCAT+GGG 0.610284 7:+53420027 MsG0780038810.01.T01:CDS
TCTGAAAACATAAGGAATGA+CGG 0.610544 7:+53420434 MsG0780038810.01.T01:CDS
ACTTGTTCCATATGTCCTTG+AGG 0.614119 7:-53417371 None:intergenic
TGCGACACTCTTGCTATCGT+CGG 0.614271 7:-53420585 None:intergenic
TGCGGTGGACTTGACCGCGT+TGG 0.615624 7:+53421164 MsG0780038810.01.T01:CDS
AGAAGGGGTTCTATCTCCCA+TGG 0.616888 7:-53420043 None:intergenic
ACCTTAGGAGTGTTCGTGCG+AGG 0.624847 7:-53420743 None:intergenic
GGGTGTTGCAGTGGGTCGTG+CGG 0.626070 7:+53421146 MsG0780038810.01.T01:CDS
CAGTTATGGAAAGCTTGTGC+TGG 0.627540 7:+53417302 MsG0780038810.01.T01:CDS
GAACATTGACAACACGACAA+AGG 0.628833 7:-53417639 None:intergenic
CAAATCAGGAACTAAATCAG+AGG 0.630877 7:+53417587 MsG0780038810.01.T01:CDS
TCTGGTCAGAGCATGCACCT+TGG 0.631687 7:+53419237 MsG0780038810.01.T01:CDS
CAGTGAGGGAAGACATTCAG+TGG 0.635444 7:-53418402 None:intergenic
GGTTTATGCACAGATAACTC+TGG 0.642878 7:+53418137 MsG0780038810.01.T01:CDS
GTGTCCTGACACAAATGAGA+AGG 0.645568 7:-53420560 None:intergenic
GCTGTTTATAGAGGGCACAA+TGG 0.646019 7:+53419150 MsG0780038810.01.T01:intron
AGCGGCAACGCATCCCTCAG+AGG 0.650317 7:-53420798 None:intergenic
ACTAAGTCTAACCCTACTAA+GGG 0.650888 7:-53420279 None:intergenic
TTATCGAGGAATCTGACTGA+CGG 0.657132 7:+53420506 MsG0780038810.01.T01:CDS
TGTATTTGGAGTCACCTCTG+AGG 0.658303 7:+53420784 MsG0780038810.01.T01:CDS
GCACGAGGAACTTCAACATG+AGG 0.659171 7:-53417326 None:intergenic
AGATGGTGTTATTACCAGTG+AGG 0.662485 7:-53418417 None:intergenic
GACCTGATAGAATTTCACCA+TGG 0.666067 7:+53420026 MsG0780038810.01.T01:CDS
GGCTGAACAAGAAACAGATG+AGG 0.666478 7:+53418116 MsG0780038810.01.T01:intron
AGTTGCAACAGCATGAGACG+CGG 0.666713 7:-53419271 None:intergenic
AAGTCTAACCCTACTAAGGG+AGG 0.667653 7:-53420276 None:intergenic
TTCAAAGGAGACACAACAGT+AGG 0.668217 7:+53420347 MsG0780038810.01.T01:CDS
AAGAACTCACTCCTTCAGCA+AGG 0.678844 7:+53418322 MsG0780038810.01.T01:CDS
GTAGGAGCAGAAGCCAGAAG+GGG 0.683231 7:-53420058 None:intergenic
GCAGCAGCAATGGTTTATCG+AGG 0.685062 7:+53420492 MsG0780038810.01.T01:CDS
AAAACTCTTTGTCCAGCACG+AGG 0.695811 7:-53417341 None:intergenic
TCTGATACAAGTACTCATGG+TGG 0.729409 7:+53418356 MsG0780038810.01.T01:CDS
GTTGTGAGCAAGTGTCGACG+TGG 0.742837 7:-53418948 None:intergenic
TGTCAAGGAGAACAAAACGG+AGG 0.766105 7:+53420679 MsG0780038810.01.T01:CDS
TTGATCATAACCATCCAACG+CGG 0.801658 7:-53421178 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAGAGAAAAGAAATTTA+AGG - Chr7:53418219-53418238 None:intergenic 15.0%
!! TATAACAAAGGATAAAATAA+AGG + Chr7:53419665-53419684 MsG0780038810.01.T01:intron 15.0%
!!! ATTATTAACTTGTATTACAT+CGG - Chr7:53420408-53420427 None:intergenic 15.0%
!!! TTGATTCTATTTTTTTGTTT+TGG + Chr7:53417501-53417520 MsG0780038810.01.T01:intron 15.0%
!!! TTGTGTTAATGTTTTAATTT+GGG + Chr7:53417783-53417802 MsG0780038810.01.T01:intron 15.0%
!!! TTTGTGTTAATGTTTTAATT+TGG + Chr7:53417782-53417801 MsG0780038810.01.T01:intron 15.0%
!! AAACAATAAGAACAATTCTT+TGG + Chr7:53417712-53417731 MsG0780038810.01.T01:intron 20.0%
!! AAATAAGTTTGATATCTCAA+AGG + Chr7:53420847-53420866 MsG0780038810.01.T01:CDS 20.0%
!! AGTATAGTTAGTAATATGTT+AGG + Chr7:53421019-53421038 MsG0780038810.01.T01:intron 20.0%
!! ATGAATCATGTATTAGAATT+AGG - Chr7:53419798-53419817 None:intergenic 20.0%
!! CAAACTACAGAAATAAAATT+TGG - Chr7:53419537-53419556 None:intergenic 20.0%
!! CTTCTTTGATTATATGAATA+GGG + Chr7:53418048-53418067 MsG0780038810.01.T01:intron 20.0%
!! TAAACATTTACAAACCAATT+TGG - Chr7:53418477-53418496 None:intergenic 20.0%
!! TATAAGTGTGAATAAGTATA+TGG + Chr7:53419426-53419445 MsG0780038810.01.T01:CDS 20.0%
!! TCTTCGAATATATAATGAAA+AGG - Chr7:53419568-53419587 None:intergenic 20.0%
!! TCTTCTTTGATTATATGAAT+AGG + Chr7:53418047-53418066 MsG0780038810.01.T01:intron 20.0%
!! TGAATCATGTATTAGAATTA+GGG - Chr7:53419797-53419816 None:intergenic 20.0%
!! TTAAGCAATTTGTATAACAA+AGG + Chr7:53419653-53419672 MsG0780038810.01.T01:intron 20.0%
!! TTACTAGTTGTAAAAATAAC+TGG + Chr7:53419335-53419354 MsG0780038810.01.T01:intron 20.0%
!! TTCTTTGATTATATGAATAG+GGG + Chr7:53418049-53418068 MsG0780038810.01.T01:intron 20.0%
!! TTGTGTTAATATATCCAAAT+TGG + Chr7:53418460-53418479 MsG0780038810.01.T01:intron 20.0%
!!! AACTAGTAAAAATTTTACCT+GGG - Chr7:53419324-53419343 None:intergenic 20.0%
!!! AGGTTGTTTTTATTACAATT+TGG + Chr7:53417860-53417879 MsG0780038810.01.T01:intron 20.0%
!!! CTAACTATACTAAGATTTTT+CGG - Chr7:53421010-53421029 None:intergenic 20.0%
!!! CTATTTTTTTGTTTTGGTTA+AGG + Chr7:53417507-53417526 MsG0780038810.01.T01:intron 20.0%
!!! GGTTGTTTTTATTACAATTT+GGG + Chr7:53417861-53417880 MsG0780038810.01.T01:intron 20.0%
!!! GTTGTTTTTATTACAATTTG+GGG + Chr7:53417862-53417881 MsG0780038810.01.T01:intron 20.0%
!!! TAATTTGTTTGGATTTCTAA+TGG + Chr7:53418234-53418253 MsG0780038810.01.T01:intron 20.0%
!!! TGTGTTAATGTTTTAATTTG+GGG + Chr7:53417784-53417803 MsG0780038810.01.T01:intron 20.0%
!!! TTCACAAATTTTTTCCAATT+TGG + Chr7:53418189-53418208 MsG0780038810.01.T01:intron 20.0%
!!! TTGAATTTTGACATGTTTAT+AGG + Chr7:53418095-53418114 MsG0780038810.01.T01:intron 20.0%
!!! TTGAGATATCAAACTTATTT+TGG - Chr7:53420847-53420866 None:intergenic 20.0%
!!! TTTCTTTTCTCTAATTTGTT+TGG + Chr7:53418223-53418242 MsG0780038810.01.T01:intron 20.0%
!!! TTTGAAATGAAAACGATTAT+AGG - Chr7:53420173-53420192 None:intergenic 20.0%
!!! TTTTGCTTTATATGTTTTTG+TGG + Chr7:53417545-53417564 MsG0780038810.01.T01:intron 20.0%
! AGAGTTATATTTGATCAAAG+TGG + Chr7:53417199-53417218 MsG0780038810.01.T01:five_prime_UTR 25.0%
! ATCAACCAAAAATTTAGTGT+TGG + Chr7:53419454-53419473 MsG0780038810.01.T01:CDS 25.0%
! ATGTTATGTCTGAAAACATA+AGG + Chr7:53420426-53420445 MsG0780038810.01.T01:CDS 25.0%
! ATGTTTAGTAAAACTATGTC+TGG + Chr7:53418490-53418509 MsG0780038810.01.T01:intron 25.0%
! CCATACATTGTTTATTTACA+TGG + Chr7:53420964-53420983 MsG0780038810.01.T01:intron 25.0%
! CCATGTAAATAAACAATGTA+TGG - Chr7:53420967-53420986 None:intergenic 25.0%
! GAAAGGAAAATCTTAGAATT+TGG - Chr7:53418916-53418935 None:intergenic 25.0%
! TATTCACACTTATAATGAAC+TGG - Chr7:53419420-53419439 None:intergenic 25.0%
! TTATATATTCGAAGACTGTT+TGG + Chr7:53419573-53419592 MsG0780038810.01.T01:intron 25.0%
! TTGTTTCGAATTTCAAATGA+TGG + Chr7:53419928-53419947 MsG0780038810.01.T01:intron 25.0%
!! AAATTTAAGGTTGACCAAAT+TGG - Chr7:53418206-53418225 None:intergenic 25.0%
!! ATTTGAAATTCGAAACAAAG+TGG - Chr7:53419926-53419945 None:intergenic 25.0%
!! CAACTAGTAAAAATTTTACC+TGG - Chr7:53419325-53419344 None:intergenic 25.0%
!! CTTTTGATGTCAATTTTTGT+TGG - Chr7:53418774-53418793 None:intergenic 25.0%
!! GACTACAAAGTGTAAAATTT+TGG - Chr7:53420237-53420256 None:intergenic 25.0%
!! GGTGTTTTGTAATAATTCAA+GGG + Chr7:53417733-53417752 MsG0780038810.01.T01:intron 25.0%
!! TAAGATTTTCCTTTCTATTC+AGG + Chr7:53418921-53418940 MsG0780038810.01.T01:intron 25.0%
!! TCTTATTGTTTTCTCCAAAA+GGG - Chr7:53417703-53417722 None:intergenic 25.0%
!! TGGTGTTTTGTAATAATTCA+AGG + Chr7:53417732-53417751 MsG0780038810.01.T01:intron 25.0%
!! TGTTCTTTTTGTTAAGTCTT+AGG + Chr7:53417430-53417449 MsG0780038810.01.T01:intron 25.0%
!! TTCTTATTGTTTTCTCCAAA+AGG - Chr7:53417704-53417723 None:intergenic 25.0%
!! TTTTCTTAGTTTCCTTCATA+TGG + Chr7:53419055-53419074 MsG0780038810.01.T01:intron 25.0%
!!! TTTTTGTCTTTTTTACCCTT+TGG + Chr7:53417894-53417913 MsG0780038810.01.T01:intron 25.0%
ACAATTTCCCATTTATTCCT+AGG - Chr7:53421252-53421271 None:intergenic 30.0%
ACTTATTTGAGCTTATCTAC+TGG - Chr7:53419760-53419779 None:intergenic 30.0%
ACTTTACTTACTGGGAAAAT+GGG + Chr7:53420372-53420391 MsG0780038810.01.T01:CDS 30.0%
AGGATCTTCACAATTATGAA+TGG + Chr7:53418564-53418583 MsG0780038810.01.T01:CDS 30.0%
ATATTCTCATCAGGTTCAAT+GGG + Chr7:53419982-53420001 MsG0780038810.01.T01:intron 30.0%
ATGAACTCTATGAACAGTTA+TGG + Chr7:53417288-53417307 MsG0780038810.01.T01:CDS 30.0%
ATGAGAATATATGAGAAGAG+TGG - Chr7:53419972-53419991 None:intergenic 30.0%
CAATCCACTATTTAACTCTA+TGG + Chr7:53421071-53421090 MsG0780038810.01.T01:intron 30.0%
CACTTTAAGCATATATTTCG+AGG + Chr7:53418587-53418606 MsG0780038810.01.T01:CDS 30.0%
CATCATCAATTATTGAACTC+AGG - Chr7:53418687-53418706 None:intergenic 30.0%
CATGTTCAAGAGAAAACATT+AGG - Chr7:53418833-53418852 None:intergenic 30.0%
GGAGAACATTACCAAAAATT+GGG - Chr7:53417817-53417836 None:intergenic 30.0%
GTGAAAAGTGAAAAGTGAAA+AGG + Chr7:53417221-53417240 MsG0780038810.01.T01:five_prime_UTR 30.0%
GTGAATGATGCTTAGAATTT+GGG + Chr7:53417976-53417995 MsG0780038810.01.T01:intron 30.0%
TACATCCTTACATTAGATTC+TGG - Chr7:53418165-53418184 None:intergenic 30.0%
TATATTCTCATCAGGTTCAA+TGG + Chr7:53419981-53420000 MsG0780038810.01.T01:intron 30.0%
TCCAAAAGGGAAAAGAAAAT+AGG - Chr7:53417690-53417709 None:intergenic 30.0%
TCGTGAATATATCTTGACAA+GGG + Chr7:53419368-53419387 MsG0780038810.01.T01:intron 30.0%
TCTGAAAACATAAGGAATGA+CGG + Chr7:53420434-53420453 MsG0780038810.01.T01:CDS 30.0%
TCTTCTCATATATTCTCATC+AGG + Chr7:53419973-53419992 MsG0780038810.01.T01:intron 30.0%
TGTGTTTCATTTGGAGATAT+CGG - Chr7:53420902-53420921 None:intergenic 30.0%
TTCGTGAATATATCTTGACA+AGG + Chr7:53419367-53419386 MsG0780038810.01.T01:intron 30.0%
! AAATACATTTGCTGCATACT+CGG - Chr7:53420771-53420790 None:intergenic 30.0%
! ACATGATTCATCAGATTTTC+TGG + Chr7:53419807-53419826 MsG0780038810.01.T01:intron 30.0%
! ACTTCAAAAAGATTAGTTGC+TGG + Chr7:53418990-53419009 MsG0780038810.01.T01:CDS 30.0%
! AGAGTTTTCTATTTTCCTCA+AGG + Chr7:53417356-53417375 MsG0780038810.01.T01:CDS 30.0%
! AGCACAATGATGATGAATAA+TGG + Chr7:53417257-53417276 MsG0780038810.01.T01:exon 30.0%
! CAAATCTCGAGTCTTTTTAA+TGG - Chr7:53418715-53418734 None:intergenic 30.0%
! TATTTCTGTAGTTTGCAACA+TGG + Chr7:53419542-53419561 MsG0780038810.01.T01:intron 30.0%
! TCAGATTTTCCAAGTATATG+TGG + Chr7:53418660-53418679 MsG0780038810.01.T01:intron 30.0%
! TCATGCCAACACTAAATTTT+TGG - Chr7:53419462-53419481 None:intergenic 30.0%
! TCCTATTTTCTTTTCCCTTT+TGG + Chr7:53417686-53417705 MsG0780038810.01.T01:intron 30.0%
! TGGTAATAACACCATCTTTT+TGG + Chr7:53418423-53418442 MsG0780038810.01.T01:intron 30.0%
! TTTTGTTAAACCACTACTAG+TGG + Chr7:53418807-53418826 MsG0780038810.01.T01:intron 30.0%
!! AAAAATTTAGTGTTGGCATG+AGG + Chr7:53419461-53419480 MsG0780038810.01.T01:CDS 30.0%
!! ACTATGTCTGGATTTTGTTT+AGG + Chr7:53418502-53418521 MsG0780038810.01.T01:intron 30.0%
!! AGATTTTCTGGCACAATAAT+TGG + Chr7:53419819-53419838 MsG0780038810.01.T01:intron 30.0%
!! AGGTTTAAGATGAGTTTTGA+TGG + Chr7:53419481-53419500 MsG0780038810.01.T01:CDS 30.0%
!! ATTAGATAAGTCGGTTTTGT+AGG + Chr7:53418873-53418892 MsG0780038810.01.T01:intron 30.0%
!! CTCAGTTTGCTAAGAAAATT+TGG - Chr7:53418261-53418280 None:intergenic 30.0%
!! GGTTTAAGATGAGTTTTGAT+GGG + Chr7:53419482-53419501 MsG0780038810.01.T01:CDS 30.0%
!! GTTAGAAGTATCAACAAATC+AGG + Chr7:53417573-53417592 MsG0780038810.01.T01:intron 30.0%
!! GTTTAAGATGAGTTTTGATG+GGG + Chr7:53419483-53419502 MsG0780038810.01.T01:CDS 30.0%
!! GTTTTCATTTCGCTTTTCAA+AGG + Chr7:53420332-53420351 MsG0780038810.01.T01:CDS 30.0%
!! TTAGATAAGTCGGTTTTGTA+GGG + Chr7:53418874-53418893 MsG0780038810.01.T01:intron 30.0%
!!! TCTGAGTGAGTTTTTGAAAT+AGG - Chr7:53420623-53420642 None:intergenic 30.0%
AACTCTGATACAAGTACTCA+TGG + Chr7:53418353-53418372 MsG0780038810.01.T01:CDS 35.0%
AAGAGGATATTTCTTCACAC+TGG + Chr7:53419844-53419863 MsG0780038810.01.T01:CDS 35.0%
AATAGAGCCTTAACTAAAGC+AGG - Chr7:53420202-53420221 None:intergenic 35.0%
ACCTGATAGAATTTCACCAT+GGG + Chr7:53420027-53420046 MsG0780038810.01.T01:CDS 35.0%
ACTAAGTCTAACCCTACTAA+GGG - Chr7:53420282-53420301 None:intergenic 35.0%
ACTTGATGGAAGAATACTCT+TGG + Chr7:53418745-53418764 MsG0780038810.01.T01:intron 35.0%
AGATCCATCCTAGGAATAAA+TGG + Chr7:53421241-53421260 MsG0780038810.01.T01:CDS 35.0%
AGTAGGTGACTTTACTTACT+GGG + Chr7:53420364-53420383 MsG0780038810.01.T01:CDS 35.0%
ATGTGTTGTGTTATGATGCT+TGG + Chr7:53417463-53417482 MsG0780038810.01.T01:intron 35.0%
CAAATCAGGAACTAAATCAG+AGG + Chr7:53417587-53417606 MsG0780038810.01.T01:CDS 35.0%
CAATGATCATTTGACTGATC+AGG + Chr7:53420655-53420674 MsG0780038810.01.T01:CDS 35.0%
CACAATGAACAATTCAGAGT+AGG - Chr7:53421097-53421116 None:intergenic 35.0%
CAGTACAAAAGCCAAAAAGA+TGG - Chr7:53418437-53418456 None:intergenic 35.0%
CGGTCAAACTCTAAATTATC+AGG - Chr7:53417936-53417955 None:intergenic 35.0%
CGTGAATGATGCTTAGAATT+TGG + Chr7:53417975-53417994 MsG0780038810.01.T01:intron 35.0%
CTACAAGCTGTAGATTGTTT+GGG + Chr7:53420705-53420724 MsG0780038810.01.T01:CDS 35.0%
CTCCTGCTGCAAAATATAAA+AGG + Chr7:53420092-53420111 MsG0780038810.01.T01:CDS 35.0%
CTGCAAAATATAAAAGGCCT+AGG + Chr7:53420098-53420117 MsG0780038810.01.T01:CDS 35.0%
GACTTTACTTACTGGGAAAA+TGG + Chr7:53420371-53420390 MsG0780038810.01.T01:CDS 35.0%
GAGTATGCAGCAAATGTATT+TGG + Chr7:53420770-53420789 MsG0780038810.01.T01:CDS 35.0%
GATCCATCCTAGGAATAAAT+GGG + Chr7:53421242-53421261 MsG0780038810.01.T01:CDS 35.0%
GGGAAAAGAAAATAGGATGA+AGG - Chr7:53417683-53417702 None:intergenic 35.0%
GGGAGAACATTACCAAAAAT+TGG - Chr7:53417818-53417837 None:intergenic 35.0%
GTGTTATGATGCTTGGAATT+TGG + Chr7:53417470-53417489 MsG0780038810.01.T01:intron 35.0%
TAGGCCATAGAGTTAAATAG+TGG - Chr7:53421078-53421097 None:intergenic 35.0%
TCTCAAAGGCTTCAAAAGAA+AGG + Chr7:53420861-53420880 MsG0780038810.01.T01:CDS 35.0%
TGATTATATGAATAGGGGTG+TGG + Chr7:53418054-53418073 MsG0780038810.01.T01:intron 35.0%
TGCTTGCTTTGTGTTTCATT+TGG - Chr7:53420911-53420930 None:intergenic 35.0%
TGGATTGATAAAGAGAACGA+TGG - Chr7:53421058-53421077 None:intergenic 35.0%
TGGTACCAGAATCTAATGTA+AGG + Chr7:53418157-53418176 MsG0780038810.01.T01:intron 35.0%
TGTCAAAAGGTTCAAATGCA+GGG + Chr7:53421126-53421145 MsG0780038810.01.T01:intron 35.0%
TGTGTTCAAAACCTGTCAAA+AGG + Chr7:53421113-53421132 MsG0780038810.01.T01:intron 35.0%
TGTTGTCAATGTTCATTTGC+TGG + Chr7:53417648-53417667 MsG0780038810.01.T01:CDS 35.0%
TTCAAAATGGAGATCACTCA+AGG + Chr7:53419872-53419891 MsG0780038810.01.T01:CDS 35.0%
TTGTCATCATCATCATGTAC+TGG - Chr7:53417147-53417166 None:intergenic 35.0%
TTGTTGGGAAGTTTGAACAA+TGG - Chr7:53417616-53417635 None:intergenic 35.0%
TTTCCCATTTATTCCTAGGA+TGG - Chr7:53421248-53421267 None:intergenic 35.0%
! AAAACCGACTTATCTAATGC+GGG - Chr7:53418871-53418890 None:intergenic 35.0%
! AAGACTCGAGATTTGTCTTT+TGG + Chr7:53418720-53418739 MsG0780038810.01.T01:intron 35.0%
! AAGCAAGATGCTGTTTATAG+AGG + Chr7:53419141-53419160 MsG0780038810.01.T01:intron 35.0%
! AGCAAGATGCTGTTTATAGA+GGG + Chr7:53419142-53419161 MsG0780038810.01.T01:intron 35.0%
! ATCGATTCCTGCTTTAGTTA+AGG + Chr7:53420192-53420211 MsG0780038810.01.T01:intron 35.0%
! ATGTGTTGATCCAAGTAGAA+GGG + Chr7:53418635-53418654 MsG0780038810.01.T01:intron 35.0%
! ATTGTCTTCACTGATGATGA+AGG + Chr7:53421267-53421286 MsG0780038810.01.T01:CDS 35.0%
! CAAAACCGACTTATCTAATG+CGG - Chr7:53418872-53418891 None:intergenic 35.0%
! CACACTGGTTGAATTCAAAA+TGG + Chr7:53419859-53419878 MsG0780038810.01.T01:CDS 35.0%
! CTATTTTCCTCAAGGACATA+TGG + Chr7:53417364-53417383 MsG0780038810.01.T01:CDS 35.0%
! CTCTCTCTTTTGTAAGGAAA+CGG - Chr7:53416994-53417013 None:intergenic 35.0%
! CTTTCTCTCTCTCTTTTGTA+AGG - Chr7:53417000-53417019 None:intergenic 35.0%
! CTTTTATATTTTGCAGCAGG+AGG - Chr7:53420094-53420113 None:intergenic 35.0%
! GATTATATGAATAGGGGTGT+GGG + Chr7:53418055-53418074 MsG0780038810.01.T01:intron 35.0%
! GGGGTTAATTTCCCAATTTT+TGG + Chr7:53417803-53417822 MsG0780038810.01.T01:intron 35.0%
! TGATTTTCTGAGCCATATGA+AGG - Chr7:53419070-53419089 None:intergenic 35.0%
! TTGTCTTCACTGATGATGAA+GGG + Chr7:53421268-53421287 MsG0780038810.01.T01:CDS 35.0%
!! AGAGTGTGTTTTTGTCTGAA+AGG + Chr7:53417018-53417037 MsG0780038810.01.T01:five_prime_UTR 35.0%
!! TTTGTCTTTTGGCTACTTGA+TGG + Chr7:53418731-53418750 MsG0780038810.01.T01:intron 35.0%
!!! GGCTTTTTTTTGGTTTGCTT+AGG + Chr7:53419389-53419408 MsG0780038810.01.T01:intron 35.0%
!!! TCTTGACAAGGGCTTTTTTT+TGG + Chr7:53419379-53419398 MsG0780038810.01.T01:intron 35.0%
AAACATTAGGCCACTAGTAG+TGG - Chr7:53418820-53418839 None:intergenic 40.0%
AAATCTGAGTCCCTTCTACT+TGG - Chr7:53418648-53418667 None:intergenic 40.0%
AACACGACAAAGGATCTTGT+TGG - Chr7:53417632-53417651 None:intergenic 40.0%
AACTCAGGAATTGGTTGCTA+AGG + Chr7:53418544-53418563 MsG0780038810.01.T01:CDS 40.0%
AACTCAGGACCACATATACT+TGG - Chr7:53418672-53418691 None:intergenic 40.0%
AAGTCCCGCATTAGATAAGT+CGG + Chr7:53418864-53418883 MsG0780038810.01.T01:intron 40.0%
ACACGACAAAGGATCTTGTT+GGG - Chr7:53417631-53417650 None:intergenic 40.0%
ACTGATAATAGCAGCAGCAA+TGG + Chr7:53420482-53420501 MsG0780038810.01.T01:CDS 40.0%
ACTTGTTCCATATGTCCTTG+AGG - Chr7:53417374-53417393 None:intergenic 40.0%
AGAACCCAGATGAACATTAG+TGG - Chr7:53417839-53417858 None:intergenic 40.0%
AGACTTAGTGGCGTTATACT+TGG + Chr7:53420293-53420312 MsG0780038810.01.T01:CDS 40.0%
AGAGAAGCTGTTTGACATGA+AGG + Chr7:53421215-53421234 MsG0780038810.01.T01:CDS 40.0%
ATCTACTCCAACTCAGGAAT+TGG + Chr7:53418535-53418554 MsG0780038810.01.T01:CDS 40.0%
ATGCCTTCATCTGTGATTTC+TGG + Chr7:53419219-53419238 MsG0780038810.01.T01:CDS 40.0%
ATTCTCCTGAGACTGACAAA+AGG + Chr7:53419509-53419528 MsG0780038810.01.T01:CDS 40.0%
CAAGGGTCAAATGTTCATCT+GGG + Chr7:53417750-53417769 MsG0780038810.01.T01:intron 40.0%
CACTAAGTCTAACCCTACTA+AGG - Chr7:53420283-53420302 None:intergenic 40.0%
CAGTAGGTGACTTTACTTAC+TGG + Chr7:53420363-53420382 MsG0780038810.01.T01:CDS 40.0%
CTATCTTCTCCTCATTCAAG+TGG + Chr7:53420536-53420555 MsG0780038810.01.T01:CDS 40.0%
CTGTCAAAAGGTTCAAATGC+AGG + Chr7:53421125-53421144 MsG0780038810.01.T01:intron 40.0%
CTTAGTAGGGTTAGACTTAG+TGG + Chr7:53420281-53420300 MsG0780038810.01.T01:CDS 40.0%
CTTAGTGCAACTTCTGCTAT+TGG - Chr7:53420936-53420955 None:intergenic 40.0%
GAACATTGACAACACGACAA+AGG - Chr7:53417642-53417661 None:intergenic 40.0%
GAACCCAGATGAACATTAGT+GGG - Chr7:53417838-53417857 None:intergenic 40.0%
GACCTGATAGAATTTCACCA+TGG + Chr7:53420026-53420045 MsG0780038810.01.T01:CDS 40.0%
GAGAAGCTGTTTGACATGAA+GGG + Chr7:53421216-53421235 MsG0780038810.01.T01:CDS 40.0%
GCTACAAGCTGTAGATTGTT+TGG + Chr7:53420704-53420723 MsG0780038810.01.T01:CDS 40.0%
GGTGAAATTCTATCAGGTCT+TGG - Chr7:53420025-53420044 None:intergenic 40.0%
GGTTGTCAAGGAGAACAAAA+CGG + Chr7:53420676-53420695 MsG0780038810.01.T01:CDS 40.0%
GGTTTATGCACAGATAACTC+TGG + Chr7:53418137-53418156 MsG0780038810.01.T01:CDS 40.0%
GTCAGACTTTACTTGACTCT+CGG - Chr7:53417956-53417975 None:intergenic 40.0%
GTTAGTTAAGACCTTGCTGA+AGG - Chr7:53418336-53418355 None:intergenic 40.0%
TAATGTTCATCTGGGTTCTG+AGG + Chr7:53417840-53417859 MsG0780038810.01.T01:intron 40.0%
TCAAGGGTCAAATGTTCATC+TGG + Chr7:53417749-53417768 MsG0780038810.01.T01:intron 40.0%
TCCCATGGTGAAATTCTATC+AGG - Chr7:53420031-53420050 None:intergenic 40.0%
TCTCCCACTAATGTTCATCT+GGG + Chr7:53417832-53417851 MsG0780038810.01.T01:intron 40.0%
TCTGATACAAGTACTCATGG+TGG + Chr7:53418356-53418375 MsG0780038810.01.T01:CDS 40.0%
TCTGCATCAGTTCTTGACAT+GGG - Chr7:53420824-53420843 None:intergenic 40.0%
TGACCAGAAATCACAGATGA+AGG - Chr7:53419225-53419244 None:intergenic 40.0%
TGGCACAATAATTGGACAAG+AGG + Chr7:53419827-53419846 MsG0780038810.01.T01:CDS 40.0%
TGGTAAGGAAGCGGAATATT+TGG + Chr7:53420144-53420163 MsG0780038810.01.T01:CDS 40.0%
TTAGCAACCAATTCCTGAGT+TGG - Chr7:53418545-53418564 None:intergenic 40.0%
TTATCGAGGAATCTGACTGA+CGG + Chr7:53420506-53420525 MsG0780038810.01.T01:CDS 40.0%
TTATCTACTGGCATAAGCAC+TGG - Chr7:53419748-53419767 None:intergenic 40.0%
TTCAAAGGAGACACAACAGT+AGG + Chr7:53420347-53420366 MsG0780038810.01.T01:CDS 40.0%
TTCTCCCACTAATGTTCATC+TGG + Chr7:53417831-53417850 MsG0780038810.01.T01:intron 40.0%
TTGATCATAACCATCCAACG+CGG - Chr7:53421181-53421200 None:intergenic 40.0%
TTGTAGTATACTACAAGCCC+AGG + Chr7:53419304-53419323 MsG0780038810.01.T01:CDS 40.0%
! ATGGTGGCTTTTCTGTTCTT+CGG + Chr7:53418372-53418391 MsG0780038810.01.T01:CDS 40.0%
! ATTCCTGAGTTGGAGTAGAT+TGG - Chr7:53418535-53418554 None:intergenic 40.0%
! CATGTGTTGATCCAAGTAGA+AGG + Chr7:53418634-53418653 MsG0780038810.01.T01:intron 40.0%
! CTGCATTTGAACCTTTTGAC+AGG - Chr7:53421127-53421146 None:intergenic 40.0%
! GAGATACGTTTGTGTTTCTG+AGG + Chr7:53419012-53419031 MsG0780038810.01.T01:CDS 40.0%
! GGCCTTTTATATTTTGCAGC+AGG - Chr7:53420097-53420116 None:intergenic 40.0%
! TGTCTTCACTGATGATGAAG+GGG + Chr7:53421269-53421288 MsG0780038810.01.T01:CDS 40.0%
! TTCCTGAGTTGGAGTAGATT+GGG - Chr7:53418534-53418553 None:intergenic 40.0%
! TTTGACTGATCAGGTTGTCA+AGG + Chr7:53420664-53420683 MsG0780038810.01.T01:CDS 40.0%
!! AGATGGTGTTATTACCAGTG+AGG - Chr7:53418420-53418439 None:intergenic 40.0%
!! GATGGTGTTATTACCAGTGA+GGG - Chr7:53418419-53418438 None:intergenic 40.0%
!! TCCAGATTTTGGTAAGGAAG+CGG + Chr7:53420135-53420154 MsG0780038810.01.T01:CDS 40.0%
!! TGACGTTCCAGATTTTGGTA+AGG + Chr7:53420129-53420148 MsG0780038810.01.T01:CDS 40.0%
!!! TCTTTTTTACCCTTTGGTCC+CGG + Chr7:53417900-53417919 MsG0780038810.01.T01:intron 40.0%
AAAACTCTTTGTCCAGCACG+AGG - Chr7:53417344-53417363 None:intergenic 45.0%
AAGAACTCACTCCTTCAGCA+AGG + Chr7:53418322-53418341 MsG0780038810.01.T01:CDS 45.0%
AAGGAGTGAGTTCTTGGTCT+TGG - Chr7:53418317-53418336 None:intergenic 45.0%
AAGTCTAACCCTACTAAGGG+AGG - Chr7:53420279-53420298 None:intergenic 45.0%
ATCAGTTCTTGACATGGGAG+CGG - Chr7:53420819-53420838 None:intergenic 45.0%
CACAATGGAGAATTACGCGT+TGG + Chr7:53419165-53419184 MsG0780038810.01.T01:CDS 45.0%
CAGTTATGGAAAGCTTGTGC+TGG + Chr7:53417302-53417321 MsG0780038810.01.T01:CDS 45.0%
CGTGGTTGACCTGAATAGAA+AGG - Chr7:53418933-53418952 None:intergenic 45.0%
GAAGGGGATATGATGCTTGT+TGG + Chr7:53421285-53421304 MsG0780038810.01.T01:CDS 45.0%
GGAATGACGGTATGCATTTG+TGG + Chr7:53420447-53420466 MsG0780038810.01.T01:CDS 45.0%
GGCTGAACAAGAAACAGATG+AGG + Chr7:53418116-53418135 MsG0780038810.01.T01:intron 45.0%
GTCTGCATCAGTTCTTGACA+TGG - Chr7:53420825-53420844 None:intergenic 45.0%
GTGTCCTGACACAAATGAGA+AGG - Chr7:53420563-53420582 None:intergenic 45.0%
TCCGCTTCCTTACCAAAATC+TGG - Chr7:53420139-53420158 None:intergenic 45.0%
TCGAACACTTGTGATCGCTT+TGG + Chr7:53418021-53418040 MsG0780038810.01.T01:intron 45.0%
TGAGAAGGACCACTTGAATG+AGG - Chr7:53420548-53420567 None:intergenic 45.0%
TGGTCCTTCTCATTTGTGTC+AGG + Chr7:53420556-53420575 MsG0780038810.01.T01:CDS 45.0%
TGTAAGGAAACGGCGTTTGT+TGG - Chr7:53416984-53417003 None:intergenic 45.0%
TGTCAAGGAGAACAAAACGG+AGG + Chr7:53420679-53420698 MsG0780038810.01.T01:CDS 45.0%
TTGCTGAAGGAGTGAGTTCT+TGG - Chr7:53418323-53418342 None:intergenic 45.0%
! CCAAAATCTGGAACGTCACT+AGG - Chr7:53420127-53420146 None:intergenic 45.0%
! CCTAGTGACGTTCCAGATTT+TGG + Chr7:53420124-53420143 MsG0780038810.01.T01:CDS 45.0%
! GCTGTTTATAGAGGGCACAA+TGG + Chr7:53419150-53419169 MsG0780038810.01.T01:intron 45.0%
! GTATTTGGAGTCACCTCTGA+GGG + Chr7:53420785-53420804 MsG0780038810.01.T01:CDS 45.0%
! TGGTACCTTTTGTCAGTCTC+AGG - Chr7:53419517-53419536 None:intergenic 45.0%
! TGTATTTGGAGTCACCTCTG+AGG + Chr7:53420784-53420803 MsG0780038810.01.T01:CDS 45.0%
!! TGCTTGTTGGTGATGATCCA+TGG + Chr7:53421298-53421317 MsG0780038810.01.T01:CDS 45.0%
!!! CTTTTTTACCCTTTGGTCCC+GGG + Chr7:53417901-53417920 MsG0780038810.01.T01:intron 45.0%
!!! TTTTTTACCCTTTGGTCCCG+GGG + Chr7:53417902-53417921 MsG0780038810.01.T01:intron 45.0%
ACTAAGGGAGGTCAGCTACA+TGG - Chr7:53420267-53420286 None:intergenic 50.0%
AGAAGGGGTTCTATCTCCCA+TGG - Chr7:53420046-53420065 None:intergenic 50.0%
AGTTGCAACAGCATGAGACG+CGG - Chr7:53419274-53419293 None:intergenic 50.0%
ATGGGAGATAGAACCCCTTC+TGG + Chr7:53420045-53420064 MsG0780038810.01.T01:CDS 50.0%
CACTGAATGTCTTCCCTCAC+TGG + Chr7:53418403-53418422 MsG0780038810.01.T01:CDS 50.0%
CAGTGAGGGAAGACATTCAG+TGG - Chr7:53418405-53418424 None:intergenic 50.0%
CATGTTGAAGTTCCTCGTGC+TGG + Chr7:53417329-53417348 MsG0780038810.01.T01:CDS 50.0%
GACACTTGCTCACAACTGGA+TGG + Chr7:53418955-53418974 MsG0780038810.01.T01:CDS 50.0%
GCACGAGGAACTTCAACATG+AGG - Chr7:53417329-53417348 None:intergenic 50.0%
GCAGCAGCAATGGTTTATCG+AGG + Chr7:53420492-53420511 MsG0780038810.01.T01:CDS 50.0%
GCAGGAGGTTGAATAGTCGT+AGG - Chr7:53420079-53420098 None:intergenic 50.0%
GGAATCTGACTGACGGAAGT+TGG + Chr7:53420513-53420532 MsG0780038810.01.T01:CDS 50.0%
GGACAAGGATCAAGGCTTGT+AGG - Chr7:53418284-53418303 None:intergenic 50.0%
GTAGCTGACCTCCCTTAGTA+GGG + Chr7:53420268-53420287 MsG0780038810.01.T01:intron 50.0%
GTCCCAATCTACTCCAACTC+AGG + Chr7:53418529-53418548 MsG0780038810.01.T01:CDS 50.0%
GTTCAGCAGGACAAGGATCA+AGG - Chr7:53418292-53418311 None:intergenic 50.0%
TGAAGGGACAGATCCATCCT+AGG + Chr7:53421232-53421251 MsG0780038810.01.T01:CDS 50.0%
TGTAGCTGACCTCCCTTAGT+AGG + Chr7:53420267-53420286 MsG0780038810.01.T01:intron 50.0%
! GATGAAGGCATGCAGCTTTG+TGG - Chr7:53419210-53419229 None:intergenic 50.0%
! TGCGACACTCTTGCTATCGT+CGG - Chr7:53420588-53420607 None:intergenic 50.0%
! TTTTTACCCTTTGGTCCCGG+GGG + Chr7:53417903-53417922 MsG0780038810.01.T01:intron 50.0%
!! CAAATGCAGGGTGTTGCAGT+GGG + Chr7:53421138-53421157 MsG0780038810.01.T01:CDS 50.0%
!! GAGTGAGTTCTTGGTCTTGG+AGG - Chr7:53418314-53418333 None:intergenic 50.0%
!! TAAGCACTGGCGAGACAGTT+CGG - Chr7:53419735-53419754 None:intergenic 50.0%
!! TAGCAAGAGTGTCGCAGTCT+CGG + Chr7:53420592-53420611 MsG0780038810.01.T01:CDS 50.0%
!! TCAAATGCAGGGTGTTGCAG+TGG + Chr7:53421137-53421156 MsG0780038810.01.T01:CDS 50.0%
ATTATCAGGACCCCTTCCCC+CGG - Chr7:53417922-53417941 None:intergenic 55.0%
CGTAGGAGCAGAAGCCAGAA+GGG - Chr7:53420062-53420081 None:intergenic 55.0%
CGTCGACACTTGCTCACAAC+TGG + Chr7:53418951-53418970 MsG0780038810.01.T01:CDS 55.0%
CTTGGAGGTTCAGCAGGACA+AGG - Chr7:53418299-53418318 None:intergenic 55.0%
GCTGCATACTCGGACACCTT+AGG - Chr7:53420761-53420780 None:intergenic 55.0%
GGAACGTCACTAGGTAGCCT+AGG - Chr7:53420118-53420137 None:intergenic 55.0%
GTAGGAGCAGAAGCCAGAAG+GGG - Chr7:53420061-53420080 None:intergenic 55.0%
TCCTCGCACGAACACTCCTA+AGG + Chr7:53420742-53420761 MsG0780038810.01.T01:CDS 55.0%
TCGTAGGAGCAGAAGCCAGA+AGG - Chr7:53420063-53420082 None:intergenic 55.0%
TCTGGTCAGAGCATGCACCT+TGG + Chr7:53419237-53419256 MsG0780038810.01.T01:CDS 55.0%
! GAGAATTACGCGTTGGCGTG+AGG + Chr7:53419172-53419191 MsG0780038810.01.T01:CDS 55.0%
!! AAGCACTGGCGAGACAGTTC+GGG - Chr7:53419734-53419753 None:intergenic 55.0%
!! ACCTTAGGAGTGTTCGTGCG+AGG - Chr7:53420746-53420765 None:intergenic 55.0%
!! CGGTTTTGTAGGGTCGAGTC+AGG + Chr7:53418884-53418903 MsG0780038810.01.T01:intron 55.0%
!! CTTGGTCTTGGAGGTTCAGC+AGG - Chr7:53418305-53418324 None:intergenic 55.0%
!! GTTGTGAGCAAGTGTCGACG+TGG - Chr7:53418951-53418970 None:intergenic 55.0%
ACGCGGTTGCAAGGACTCCA+AGG - Chr7:53419257-53419276 None:intergenic 60.0%
CAGCATGAGACGCGGTTGCA+AGG - Chr7:53419266-53419285 None:intergenic 60.0%
GTGGACTTGACCGCGTTGGA+TGG + Chr7:53421168-53421187 MsG0780038810.01.T01:CDS 60.0%
TTATCAGGACCCCTTCCCCC+GGG - Chr7:53417921-53417940 None:intergenic 60.0%
!! AGAGTGTCGCAGTCTCGGCT+TGG + Chr7:53420597-53420616 MsG0780038810.01.T01:CDS 60.0%
ACCCTTTGGTCCCGGGGGAA+GGG + Chr7:53417908-53417927 MsG0780038810.01.T01:intron 65.0%
AGCGGCAACGCATCCCTCAG+AGG - Chr7:53420801-53420820 None:intergenic 65.0%
TACCCTTTGGTCCCGGGGGA+AGG + Chr7:53417907-53417926 MsG0780038810.01.T01:intron 65.0%
TGTTGCAGTGGGTCGTGCGG+TGG + Chr7:53421149-53421168 MsG0780038810.01.T01:CDS 65.0%
! GGGTGTTGCAGTGGGTCGTG+CGG + Chr7:53421146-53421165 MsG0780038810.01.T01:CDS 65.0%
! TGCGGTGGACTTGACCGCGT+TGG + Chr7:53421164-53421183 MsG0780038810.01.T01:CDS 65.0%
ACCCCTTCCCCCGGGACCAA+AGG - Chr7:53417913-53417932 None:intergenic 70.0%
CCCCTTCCCCCGGGACCAAA+GGG - Chr7:53417912-53417931 None:intergenic 70.0%
CCCTTTGGTCCCGGGGGAAG+GGG + Chr7:53417909-53417928 MsG0780038810.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 53416957 53421326 53416957 ID=MsG0780038810.01;Name=MsG0780038810.01
Chr7 mRNA 53416957 53421326 53416957 ID=MsG0780038810.01.T01;Parent=MsG0780038810.01;Name=MsG0780038810.01.T01;_AED=0.28;_eAED=0.30;_QI=306|0.90|0.75|1|1|1|12|0|671
Chr7 exon 53416957 53417391 53416957 ID=MsG0780038810.01.T01:exon:9968;Parent=MsG0780038810.01.T01
Chr7 exon 53417574 53417669 53417574 ID=MsG0780038810.01.T01:exon:9969;Parent=MsG0780038810.01.T01
Chr7 exon 53418117 53418173 53418117 ID=MsG0780038810.01.T01:exon:9970;Parent=MsG0780038810.01.T01
Chr7 exon 53418272 53418424 53418272 ID=MsG0780038810.01.T01:exon:9971;Parent=MsG0780038810.01.T01
Chr7 exon 53418524 53418608 53418524 ID=MsG0780038810.01.T01:exon:9972;Parent=MsG0780038810.01.T01
Chr7 exon 53418943 53419033 53418943 ID=MsG0780038810.01.T01:exon:9973;Parent=MsG0780038810.01.T01
Chr7 exon 53419161 53419325 53419161 ID=MsG0780038810.01.T01:exon:9974;Parent=MsG0780038810.01.T01
Chr7 exon 53419411 53419530 53419411 ID=MsG0780038810.01.T01:exon:9975;Parent=MsG0780038810.01.T01
Chr7 exon 53419821 53419893 53419821 ID=MsG0780038810.01.T01:exon:9976;Parent=MsG0780038810.01.T01
Chr7 exon 53419995 53420165 53419995 ID=MsG0780038810.01.T01:exon:9977;Parent=MsG0780038810.01.T01
Chr7 exon 53420272 53420955 53420272 ID=MsG0780038810.01.T01:exon:9978;Parent=MsG0780038810.01.T01
Chr7 exon 53421135 53421326 53421135 ID=MsG0780038810.01.T01:exon:9979;Parent=MsG0780038810.01.T01
Chr7 five_prime_UTR 53416957 53417262 53416957 ID=MsG0780038810.01.T01:five_prime_utr;Parent=MsG0780038810.01.T01
Chr7 CDS 53417263 53417391 53417263 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53417574 53417669 53417574 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53418117 53418173 53418117 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53418272 53418424 53418272 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53418524 53418608 53418524 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53418943 53419033 53418943 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53419161 53419325 53419161 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53419411 53419530 53419411 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53419821 53419893 53419821 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53419995 53420165 53419995 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53420272 53420955 53420272 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Chr7 CDS 53421135 53421326 53421135 ID=MsG0780038810.01.T01:cds;Parent=MsG0780038810.01.T01
Gene Sequence

>MsG0780038810.01.T01

ATGATGATGAATAATGGTGAAGAAGATGAACTCTATGAACAGTTATGGAAAGCTTGTGCTGGTCCTCATGTTGAAGTTCCTCGTGCTGGACAAAGAGTTTTCTATTTTCCTCAAGGACATATGGAACAATTAGAAGTATCAACAAATCAGGAACTAAATCAGAGGATTCCATTGTTCAAACTTCCCAACAAGATCCTTTGTCGTGTTGTCAATGTTCATTTGCTGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATAACTCTGGTACCAGAATCTAATCAAACTGAGCCTACAAGCCTTGATCCTTGTCCTGCTGAACCTCCAAGACCAAGAACTCACTCCTTCAGCAAGGTCTTAACTAACTCTGATACAAGTACTCATGGTGGCTTTTCTGTTCTTCGGAAGCATGCCACTGAATGTCTTCCCTCACTGGATATGTCCCAATCTACTCCAACTCAGGAATTGGTTGCTAAGGATCTTCACAATTATGAATGGCACTTTAAGCATATATTTCGAGGTCAACCACGTCGACACTTGCTCACAACTGGATGGAGTACTTTCGTGACTTCAAAAAGATTAGTTGCTGGAGATACGTTTGTGTTTCTGAGAGGGCACAATGGAGAATTACGCGTTGGCGTGAGGCATCTTGCTTCTCCACAAAGCTGCATGCCTTCATCTGTGATTTCTGGTCAGAGCATGCACCTTGGAGTCCTTGCAACCGCGTCTCATGCTGTTGCAACTCAAACTCTTTTTGTAGTATACTACAAGCCCAGGATGAGCCAGTTCATTATAAGTGTGAATAAGTATATGGAAGCTATCAACCAAAAATTTAGTGTTGGCATGAGGTTTAAGATGAGTTTTGATGGGGATGATTCTCCTGAGACTGACAAAAGATTTTCTGGCACAATAATTGGACAAGAGGATATTTCTTCACACTGGTTGAATTCAAAATGGAGATCACTCAAGGTTCAATGGGATGACGCTGCATCGATTCCAAGACCTGATAGAATTTCACCATGGGAGATAGAACCCCTTCTGGCTTCTGCTCCTACGACTATTCAACCTCCTGCTGCAAAATATAAAAGGCCTAGGCTACCTAGTGACGTTCCAGATTTTGGTAAGGAAGCGGAATATTTGCTGACCTCCCTTAGTAGGGTTAGACTTAGTGGCGTTATACTTGGTGATTGTTTTGCTGACGTTTTCATTTCGCTTTTCAAAGGAGACACAACAGTAGGTGACTTTACTTACTGGGAAAATGGGCTGACACAATCCGATGTAATACAAGTTAATAATGTTATGTCTGAAAACATAAGGAATGACGGTATGCATTTGTGGCATCATAAGCAAACTGATAATAGCAGCAGCAATGGTTTATCGAGGAATCTGACTGACGGAAGTTGGCTATCTTCTCCTCATTCAAGTGGTCCTTCTCATTTGTGTCAGGACACGACCGACGATAGCAAGAGTGTCGCAGTCTCGGCTTGGCCTATTTCAAAAACTCACTCAGAAATATTGAACAACAATGATCATTTGACTGATCAGGTTGTCAAGGAGAACAAAACGGAGGCTGCTACAAGCTGTAGATTGTTTGGGATTGATCTTAATGATCCTCGCACGAACACTCCTAAGGTGTCCGAGTATGCAGCAAATGTATTTGGAGTCACCTCTGAGGGATGCGTTGCCGCTCCCATGTCAAGAACTGATGCAGACCAAAATAAGTTTGATATCTCAAAGGCTTCAAAAGAAAGGAAACAAGAACAGCTACCGATATCTCCAAATGAAACACAAAGCAAGCAAACCAATAGCAGAAGTTGCACTAAGGTTCAAATGCAGGGTGTTGCAGTGGGTCGTGCGGTGGACTTGACCGCGTTGGATGGTTATGATCAACTTATTGATGAATTAGAGAAGCTGTTTGACATGAAGGGACAGATCCATCCTAGGAATAAATGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTTGGTGATGATCCATGGCCGTGA

Protein sequence

>MsG0780038810.01.T01

MMMNNGEEDELYEQLWKACAGPHVEVPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPNKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSLDPCPAEPPRPRTHSFSKVLTNSDTSTHGGFSVLRKHATECLPSLDMSQSTPTQELVAKDLHNYEWHFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGHNGELRVGVRHLASPQSCMPSSVISGQSMHLGVLATASHAVATQTLFVVYYKPRMSQFIISVNKYMEAINQKFSVGMRFKMSFDGDDSPETDKRFSGTIIGQEDISSHWLNSKWRSLKVQWDDAASIPRPDRISPWEIEPLLASAPTTIQPPAAKYKRPRLPSDVPDFGKEAEYLLTSLSRVRLSGVILGDCFADVFISLFKGDTTVGDFTYWENGLTQSDVIQVNNVMSENIRNDGMHLWHHKQTDNSSSNGLSRNLTDGSWLSSPHSSGPSHLCQDTTDDSKSVAVSAWPISKTHSEILNNNDHLTDQVVKENKTEAATSCRLFGIDLNDPRTNTPKVSEYAANVFGVTSEGCVAAPMSRTDADQNKFDISKASKERKQEQLPISPNETQSKQTNSRSCTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDMKGQIHPRNKWEIVFTDDEGDMMLVGDDPWP*