AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043077.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043077.01.T01 MTR_8g028145 90.191 367 13 3 1 366 1 345 0.0 672
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043077.01.T01 AT3G59890 63.881 371 107 3 1 366 1 349 7.07e-168 473
MsG0880043077.01.T01 AT3G59890 64.738 363 101 3 9 366 3 343 3.43e-167 471
MsG0880043077.01.T01 AT2G44040 63.807 373 102 5 1 366 1 347 2.76e-165 466

Find 85 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCATTTCGACTTGTTGCC+TGG 0.158474 8:-18618337 None:intergenic
AGAAGTTGCTTGACGAAATT+TGG 0.198225 8:+18619149 MsG0880043077.01.T01:three_prime_UTR
TAGTCCACAATAATTAAATT+TGG 0.223137 8:-18615559 None:intergenic
TTATAGATAATCACCATTAT+TGG 0.228681 8:-18613596 None:intergenic
TCTTGCAGCTATGGAAATTA+TGG 0.252282 8:+18616235 MsG0880043077.01.T01:CDS
ACTTGGGGCTTCTTTCGATA+TGG 0.265727 8:+18618074 MsG0880043077.01.T01:CDS
TCTCCTTGTAGTGGCGTTAT+TGG 0.317973 8:-18613453 None:intergenic
CGATCTCCTCTTCTGAGAAA+TGG 0.323741 8:-18613483 None:intergenic
AAACACTGCACTTCCAATAA+TGG 0.343176 8:+18613583 MsG0880043077.01.T01:CDS
ACTCACAATAGCATATATTA+TGG 0.348953 8:-18619246 None:intergenic
AGAAGAAAGAGAGGTTGTTT+TGG 0.348961 8:-18613430 None:intergenic
TTTACCTGCTTTCCCATTTG+TGG 0.361739 8:-18616107 None:intergenic
GATCTCCTCTTCTGAGAAAT+GGG 0.362575 8:-18613482 None:intergenic
AATGTTGTTCCTGTGTCGTT+TGG 0.366545 8:+18615430 MsG0880043077.01.T01:CDS
CCCTTTGTGATGGGGACAAC+TGG 0.368017 8:+18616023 MsG0880043077.01.T01:CDS
ATGAGATAAACATTTCTATA+TGG 0.377032 8:+18619102 MsG0880043077.01.T01:exon
TACATACCATTGACTGCATT+TGG 0.379535 8:-18615589 None:intergenic
ATTATGGCAGAGCAATTTCC+TGG 0.383988 8:+18616251 MsG0880043077.01.T01:CDS
TTACCTGCTTTCCCATTTGT+GGG 0.388313 8:-18616106 None:intergenic
TGACCTGACAAATGCTCCTC+TGG 0.389725 8:-18618366 None:intergenic
AATCATGTTGTATATTCTCT+TGG 0.391006 8:-18619058 None:intergenic
TGCTGTGATATCCCCACAAA+TGG 0.391254 8:+18616094 MsG0880043077.01.T01:CDS
GTTAATTCTTACGTTTCATC+TGG 0.393981 8:-18618417 None:intergenic
ATATCTTGCTTCAATAAACT+TGG 0.407904 8:+18618057 MsG0880043077.01.T01:CDS
GCAAGCAAAGTTGATGCATC+TGG 0.411752 8:+18618018 MsG0880043077.01.T01:CDS
TTAAATTTGGATATTTATCA+AGG 0.412571 8:-18615546 None:intergenic
TCAGAAGAGGAGATCGCGTT+TGG 0.424808 8:+18613490 MsG0880043077.01.T01:CDS
ATATCCAAATTTAATTATTG+TGG 0.429832 8:+18615555 MsG0880043077.01.T01:CDS
GTCGGGGTACCCTTTGTGAT+GGG 0.439769 8:+18616014 MsG0880043077.01.T01:CDS
ATCATGTTGTATATTCTCTT+GGG 0.443698 8:-18619057 None:intergenic
GTCCCAGAGGAGCATTTGTC+AGG 0.446638 8:+18618363 MsG0880043077.01.T01:CDS
ATGTTGTTCCTGTGTCGTTT+GGG 0.451322 8:+18615431 MsG0880043077.01.T01:CDS
TTTCGTCAAGCAACTTCTAC+AGG 0.457018 8:-18619144 None:intergenic
ACCATTTCGACTTGTTGCCT+GGG 0.458785 8:-18618336 None:intergenic
GCTTAGGTTAATGCATGTAC+TGG 0.463233 8:+18615361 MsG0880043077.01.T01:intron
CACAGCATCAACTGTGCCCT+CGG 0.468874 8:-18618586 None:intergenic
GTGAGTTATACAGTAAGGTC+GGG 0.470899 8:+18615997 MsG0880043077.01.T01:CDS
TATCTTGCTTCAATAAACTT+GGG 0.480880 8:+18618058 MsG0880043077.01.T01:CDS
TGTGCTATTTCTTGCTAAGA+AGG 0.482819 8:+18618605 MsG0880043077.01.T01:CDS
CCCCAGGCAACAAGTCGAAA+TGG 0.484551 8:+18618335 MsG0880043077.01.T01:CDS
ATTAATGCAGCAGAAGCTGC+TGG 0.488529 8:+18615403 MsG0880043077.01.T01:CDS
ATCCCCACAAATGGGAAAGC+AGG 0.495975 8:+18616103 MsG0880043077.01.T01:CDS
GAATACCCAGAAAAGGCTCC+AGG 0.509753 8:-18616269 None:intergenic
GGCTTCTTTCGATATGGACC+AGG 0.513596 8:+18618080 MsG0880043077.01.T01:CDS
TTTGGGTGTGAAGAAGAGTC+CGG 0.515812 8:+18615448 MsG0880043077.01.T01:CDS
ATCTTGCTTCAATAAACTTG+GGG 0.519238 8:+18618059 MsG0880043077.01.T01:CDS
CTGTAAGGAATACCCAGAAA+AGG 0.524684 8:-18616276 None:intergenic
ACTTCCCCATTTCTCAGAAG+AGG 0.526248 8:+18613477 MsG0880043077.01.T01:CDS
GGTCGGGGTACCCTTTGTGA+TGG 0.545148 8:+18616013 MsG0880043077.01.T01:CDS
ATGCATGCAGATTGAAGCAA+AGG 0.547708 8:+18619032 MsG0880043077.01.T01:intron
GAAGCAAGATATCACAGCCT+TGG 0.548326 8:-18618046 None:intergenic
CCAGTTGTCCCCATCACAAA+GGG 0.550667 8:-18616023 None:intergenic
ATTTGGATATTTATCAAGGA+CGG 0.552123 8:-18615542 None:intergenic
TACCTGCTTTCCCATTTGTG+GGG 0.554745 8:-18616105 None:intergenic
ATGATTGATGTCTTGAGAGA+AGG 0.557235 8:+18619075 MsG0880043077.01.T01:CDS
GGTGAGTTATACAGTAAGGT+CGG 0.557351 8:+18615996 MsG0880043077.01.T01:CDS
GCTGTGATATCCCCACAAAT+GGG 0.558934 8:+18616095 MsG0880043077.01.T01:CDS
AGAAAACTCTCTCTATCAGA+TGG 0.559301 8:-18615514 None:intergenic
ACAGTACCAAATGCAGTCAA+TGG 0.560670 8:+18615583 MsG0880043077.01.T01:CDS
CAGCCAAAGAGATACCTGTA+AGG 0.561425 8:-18616291 None:intergenic
CCATTTCGACTTGTTGCCTG+GGG 0.563820 8:-18618335 None:intergenic
CAATGGTGAGTTATACAGTA+AGG 0.569413 8:+18615992 MsG0880043077.01.T01:CDS
ACAGACCTCAAAAGTCTGCC+CGG 0.570841 8:-18615467 None:intergenic
TTGGGTGTGAAGAAGAGTCC+GGG 0.573044 8:+18615449 MsG0880043077.01.T01:CDS
GACCTGACAAATGCTCCTCT+GGG 0.574145 8:-18618365 None:intergenic
TCTCCAATAACGCCACTACA+AGG 0.581849 8:+18613450 MsG0880043077.01.T01:CDS
TCGGGGTACCCTTTGTGATG+GGG 0.584412 8:+18616015 MsG0880043077.01.T01:CDS
GAATTTCAACATAATGTCTG+TGG 0.592047 8:+18618549 MsG0880043077.01.T01:CDS
TACAATTGATAAGAGACCCC+AGG 0.593954 8:+18618319 MsG0880043077.01.T01:CDS
TATCAGATGGACCGTGCACA+AGG 0.594414 8:-18615501 None:intergenic
GGAAGGGAGTTCCTTGTGCA+CGG 0.594879 8:+18615490 MsG0880043077.01.T01:CDS
GGGGAAGTTTCTCCTTGTAG+TGG 0.595052 8:-18613462 None:intergenic
CGTTATTGGAGAAGAAAGAG+AGG 0.600648 8:-18613439 None:intergenic
TCTTCACACCCAAACGACAC+AGG 0.607474 8:-18615439 None:intergenic
TGATGCATCTGGAACTGCCA+AGG 0.621113 8:+18618029 MsG0880043077.01.T01:CDS
GCCAGTTGTCCCCATCACAA+AGG 0.623789 8:-18616024 None:intergenic
CAGGCAACAAGTCGAAATGG+TGG 0.634154 8:+18618338 MsG0880043077.01.T01:CDS
AGGCAACAAGTCGAAATGGT+GGG 0.639140 8:+18618339 MsG0880043077.01.T01:CDS
ATCTCCTCTTCTGAGAAATG+GGG 0.656155 8:-18613481 None:intergenic
TTTGTGATGGGGACAACTGG+CGG 0.660019 8:+18616026 MsG0880043077.01.T01:CDS
TGGTAGATCAATATACGCCG+AGG 0.664449 8:+18618569 MsG0880043077.01.T01:CDS
TGAGTTATACAGTAAGGTCG+GGG 0.668780 8:+18615998 MsG0880043077.01.T01:CDS
CGAAATGGTGGGAGTCCCAG+AGG 0.683093 8:+18618350 MsG0880043077.01.T01:CDS
GTTGTGGAACACATTTGTTG+CGG 0.685837 8:-18613408 None:intergenic
GGTAGATCAATATACGCCGA+GGG 0.686201 8:+18618570 MsG0880043077.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAGTATAAATTACAAAAT+CGG + Chr8:18615684-18615703 MsG0880043077.01.T01:intron 10.0%
!!! ACTTTTAATTTTTATGATAT+GGG + Chr8:18615902-18615921 MsG0880043077.01.T01:intron 10.0%
!! ATATCCAAATTTAATTATTG+TGG + Chr8:18615555-18615574 MsG0880043077.01.T01:CDS 15.0%
!! GATAAAATGAATTAAAGATA+AGG - Chr8:18615203-18615222 None:intergenic 15.0%
!! TAAAAACATATACATAGTTA+AGG - Chr8:18614010-18614029 None:intergenic 15.0%
!! TATTTCAAATAACAGAATTT+CGG - Chr8:18615070-18615089 None:intergenic 15.0%
!! TTAAATTTGGATATTTATCA+AGG - Chr8:18615549-18615568 None:intergenic 15.0%
!!! AATCTTTTACATTTTTTGAA+AGG + Chr8:18616959-18616978 MsG0880043077.01.T01:intron 15.0%
!!! ATCTTTTACATTTTTTGAAA+GGG + Chr8:18616960-18616979 MsG0880043077.01.T01:intron 15.0%
!!! ATTGTATTTTTAAAACTAGA+GGG + Chr8:18615129-18615148 MsG0880043077.01.T01:intron 15.0%
!!! CATGATAATTTTATTCAAAT+TGG + Chr8:18616575-18616594 MsG0880043077.01.T01:intron 15.0%
!!! GACTTTTAATTTTTATGATA+TGG + Chr8:18615901-18615920 MsG0880043077.01.T01:intron 15.0%
!!! TTATTTTATGAAGATTGTAA+TGG + Chr8:18615932-18615951 MsG0880043077.01.T01:intron 15.0%
!!! TTTAATTCATTTTATCTGTT+TGG + Chr8:18615207-18615226 MsG0880043077.01.T01:intron 15.0%
!! AAATAAATAGACACGAAAAA+TGG - Chr8:18619205-18619224 None:intergenic 20.0%
!! AAGAGAGATTCAAATTTAAA+TGG - Chr8:18616371-18616390 None:intergenic 20.0%
!! ACACAAAAAAAAATGTTGAT+TGG - Chr8:18614570-18614589 None:intergenic 20.0%
!! ATGAGATAAACATTTCTATA+TGG + Chr8:18619102-18619121 MsG0880043077.01.T01:exon 20.0%
!! GAATGTTATGACATAAAATA+AGG - Chr8:18616530-18616549 None:intergenic 20.0%
!! TAAAACAGATACATAACATA+GGG - Chr8:18613965-18613984 None:intergenic 20.0%
!! TAAATTTGAATCTCTCTTAA+TGG + Chr8:18616373-18616392 MsG0880043077.01.T01:intron 20.0%
!! TAGAGAAAGATCAATAAAAT+CGG - Chr8:18618665-18618684 None:intergenic 20.0%
!! TAGTCCACAATAATTAAATT+TGG - Chr8:18615562-18615581 None:intergenic 20.0%
!! TTAAAACAGATACATAACAT+AGG - Chr8:18613966-18613985 None:intergenic 20.0%
!! TTATAGATAATCACCATTAT+TGG - Chr8:18613599-18613618 None:intergenic 20.0%
!! TTTATAAATTCAACTAGTGA+TGG + Chr8:18613707-18613726 MsG0880043077.01.T01:intron 20.0%
!!! AATTTTTATGATATGGGATT+AGG + Chr8:18615908-18615927 MsG0880043077.01.T01:intron 20.0%
!!! ACAACTTCAAACAATATTTT+GGG + Chr8:18618876-18618895 MsG0880043077.01.T01:intron 20.0%
!!! ATATTGAAATTTTGTTGTTG+TGG + Chr8:18617551-18617570 MsG0880043077.01.T01:intron 20.0%
!!! ATCCACTTCATTATTTTTAA+GGG + Chr8:18614271-18614290 MsG0880043077.01.T01:intron 20.0%
!!! ATTGAGGATACTATATTTTA+TGG + Chr8:18615815-18615834 MsG0880043077.01.T01:intron 20.0%
!!! GATTGTATTTTTAAAACTAG+AGG + Chr8:18615128-18615147 MsG0880043077.01.T01:intron 20.0%
!!! TACAGAAAGTATAAGATATA+TGG - Chr8:18613928-18613947 None:intergenic 20.0%
!!! TATCCACTTCATTATTTTTA+AGG + Chr8:18614270-18614289 MsG0880043077.01.T01:intron 20.0%
!!! TGAATCTTTTACAATACTTT+TGG - Chr8:18617748-18617767 None:intergenic 20.0%
!!! TTATTTTGTGATACACTATA+TGG - Chr8:18614151-18614170 None:intergenic 20.0%
! AAAAAATAAGCCAATCCAAA+CGG - Chr8:18613776-18613795 None:intergenic 25.0%
! AAAAATAAGTCAATCCAAAC+AGG + Chr8:18613833-18613852 MsG0880043077.01.T01:intron 25.0%
! AAATTTAAATGGCCTATCAT+TGG - Chr8:18616360-18616379 None:intergenic 25.0%
! AATCATGTTGTATATTCTCT+TGG - Chr8:18619061-18619080 None:intergenic 25.0%
! ACTCACAATAGCATATATTA+TGG - Chr8:18619249-18619268 None:intergenic 25.0%
! AGAAACACAGATGAATAAAT+GGG + Chr8:18616653-18616672 MsG0880043077.01.T01:intron 25.0%
! ATATCTTGCTTCAATAAACT+TGG + Chr8:18618057-18618076 MsG0880043077.01.T01:CDS 25.0%
! ATCAATCTGTTTATTTGTGA+TGG - Chr8:18617289-18617308 None:intergenic 25.0%
! ATCATGTTGTATATTCTCTT+GGG - Chr8:18619060-18619079 None:intergenic 25.0%
! ATCTTGATGTTTACTAAAGT+TGG + Chr8:18613741-18613760 MsG0880043077.01.T01:intron 25.0%
! ATGAAGTGGATAAAATCTTA+AGG - Chr8:18614262-18614281 None:intergenic 25.0%
! ATGAGAGAATATAACAATGA+GGG + Chr8:18614919-18614938 MsG0880043077.01.T01:intron 25.0%
! ATGTTGGCAAAAATAACATT+AGG + Chr8:18617882-18617901 MsG0880043077.01.T01:intron 25.0%
! ATTCGATTTACTTAAACACA+AGG - Chr8:18617618-18617637 None:intergenic 25.0%
! ATTTGGATATTTATCAAGGA+CGG - Chr8:18615545-18615564 None:intergenic 25.0%
! CTGAGAAAATATTTATTCTC+TGG + Chr8:18616755-18616774 MsG0880043077.01.T01:intron 25.0%
! GTAATTTGGAAGAAAAATTG+TGG + Chr8:18617688-18617707 MsG0880043077.01.T01:intron 25.0%
! TACAACATAATCATGAATTG+AGG + Chr8:18615799-18615818 MsG0880043077.01.T01:intron 25.0%
! TATATCGCACTTTAAATTGA+TGG - Chr8:18614634-18614653 None:intergenic 25.0%
! TATCTTGCTTCAATAAACTT+GGG + Chr8:18618058-18618077 MsG0880043077.01.T01:CDS 25.0%
! TATGAGAGAATATAACAATG+AGG + Chr8:18614918-18614937 MsG0880043077.01.T01:intron 25.0%
! TCAATCTGTTTATTTGTGAT+GGG - Chr8:18617288-18617307 None:intergenic 25.0%
! TGAAGTGGATAAAATCTTAA+GGG - Chr8:18614261-18614280 None:intergenic 25.0%
! TGTAGCATAATTTGAACAAA+CGG - Chr8:18614080-18614099 None:intergenic 25.0%
! TGTTATTATTAGAGACCTTA+GGG + Chr8:18615159-18615178 MsG0880043077.01.T01:intron 25.0%
! TTGTATCTGACAAAATTCAT+TGG - Chr8:18618304-18618323 None:intergenic 25.0%
! TTGTGTTTAAGTAAATCGAA+TGG + Chr8:18617617-18617636 MsG0880043077.01.T01:intron 25.0%
! TTTGAATCAGAAACAGTATA+AGG - Chr8:18619003-18619022 None:intergenic 25.0%
!! AAATGTGCATGATTTTATGT+TGG + Chr8:18618186-18618205 MsG0880043077.01.T01:intron 25.0%
!! ATCCTCTTTGTTTGTATATA+AGG - Chr8:18616831-18616850 None:intergenic 25.0%
!! CACAACTTCAAACAATATTT+TGG + Chr8:18618875-18618894 MsG0880043077.01.T01:intron 25.0%
!! GATACAAAAACACTTAGTTT+TGG - Chr8:18619275-18619294 None:intergenic 25.0%
!! GTTTTTACTAACAAGTTTGT+CGG - Chr8:18614897-18614916 None:intergenic 25.0%
!! TTCTGAAAAATGAATGATCT+AGG - Chr8:18615020-18615039 None:intergenic 25.0%
!! TTTTCGTGTCTATTTATTTG+AGG + Chr8:18619206-18619225 MsG0880043077.01.T01:three_prime_UTR 25.0%
!!! CATAAGTTCTTCAGTTTTAT+TGG + Chr8:18617908-18617927 MsG0880043077.01.T01:intron 25.0%
!!! CATTTTTCAGAAATGCATAA+CGG + Chr8:18615028-18615047 MsG0880043077.01.T01:intron 25.0%
!!! GTGATTGGTATATTTTTATC+CGG + Chr8:18617815-18617834 MsG0880043077.01.T01:intron 25.0%
!!! TCCACTTCATTATTTTTAAG+GGG + Chr8:18614272-18614291 MsG0880043077.01.T01:intron 25.0%
!!! TGATTTGAAACATGTGATTT+TGG - Chr8:18615732-18615751 None:intergenic 25.0%
!!! TGTTTTTGTTTATTCTGCTT+AGG + Chr8:18615345-18615364 MsG0880043077.01.T01:intron 25.0%
AAAAATAAGCCAATCCAAAC+GGG - Chr8:18613775-18613794 None:intergenic 30.0%
AAAATTCATTGGAAAGAAGG+AGG - Chr8:18618293-18618312 None:intergenic 30.0%
AAAGAACCACAAATTCTTAC+CGG + Chr8:18618262-18618281 MsG0880043077.01.T01:intron 30.0%
AAAGATATGCGTGAAACTAA+GGG - Chr8:18615242-18615261 None:intergenic 30.0%
AAATATGGAGGGTTTATGAA+AGG - Chr8:18617228-18617247 None:intergenic 30.0%
AACACAAAATCTTCCTCATT+TGG - Chr8:18617134-18617153 None:intergenic 30.0%
AAGAAAAGCAACAACCTAAA+GGG - Chr8:18616219-18616238 None:intergenic 30.0%
AAGTGGATAAAATCTTAAGG+GGG - Chr8:18614259-18614278 None:intergenic 30.0%
AATGCATGTACTGGAAAAAT+GGG + Chr8:18615370-18615389 MsG0880043077.01.T01:CDS 30.0%
ACACAAAATCTTCCTCATTT+GGG - Chr8:18617133-18617152 None:intergenic 30.0%
ACAGATGAATAAATGGGAAA+TGG + Chr8:18616659-18616678 MsG0880043077.01.T01:intron 30.0%
ACATATGACATGAGCAATTA+TGG - Chr8:18614768-18614787 None:intergenic 30.0%
AGACAAACCAAAAATATGGA+GGG - Chr8:18617239-18617258 None:intergenic 30.0%
AGTATAATATTCCCAGAAGA+TGG + Chr8:18618925-18618944 MsG0880043077.01.T01:intron 30.0%
ATAATTGCTCATGTCATATG+TGG + Chr8:18614767-18614786 MsG0880043077.01.T01:intron 30.0%
ATCAAACCAATTTCACAACT+TGG - Chr8:18613657-18613676 None:intergenic 30.0%
ATCTCTTATTGTTGAATCGT+AGG + Chr8:18618755-18618774 MsG0880043077.01.T01:intron 30.0%
ATCTTGCTTCAATAAACTTG+GGG + Chr8:18618059-18618078 MsG0880043077.01.T01:CDS 30.0%
ATGCACATTTCTCAGAAAAA+TGG - Chr8:18618176-18618195 None:intergenic 30.0%
ATTGGGATATACATCGTATT+GGG + Chr8:18616435-18616454 MsG0880043077.01.T01:intron 30.0%
ATTTAAAGAGATCTCAAGAG+AGG - Chr8:18614311-18614330 None:intergenic 30.0%
ATTTCATTGTACATTGCTCT+AGG + Chr8:18613675-18613694 MsG0880043077.01.T01:intron 30.0%
CAATAAAATCGGATAACAAG+AGG - Chr8:18618654-18618673 None:intergenic 30.0%
CAGAAACACAGATGAATAAA+TGG + Chr8:18616652-18616671 MsG0880043077.01.T01:intron 30.0%
CAGATGAATAAATGGGAAAT+GGG + Chr8:18616660-18616679 MsG0880043077.01.T01:intron 30.0%
CTCCTTATATACAAACAAAG+AGG + Chr8:18616826-18616845 MsG0880043077.01.T01:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG - Chr8:18617109-18617128 None:intergenic 30.0%
GAAGTGGATAAAATCTTAAG+GGG - Chr8:18614260-18614279 None:intergenic 30.0%
GAATTTCAACATAATGTCTG+TGG + Chr8:18618549-18618568 MsG0880043077.01.T01:CDS 30.0%
GACAAAATTCATTGGAAAGA+AGG - Chr8:18618296-18618315 None:intergenic 30.0%
GATAAAGGAAATAGTAGTAG+AGG + Chr8:18616695-18616714 MsG0880043077.01.T01:intron 30.0%
GTCTCATCAAGAAATAAGTA+GGG - Chr8:18614376-18614395 None:intergenic 30.0%
GTTAATTCTTACGTTTCATC+TGG - Chr8:18618420-18618439 None:intergenic 30.0%
GTTATTATTAGAGACCTTAG+GGG + Chr8:18615160-18615179 MsG0880043077.01.T01:intron 30.0%
GTTTACTAAAGTTGGACTTA+GGG + Chr8:18613749-18613768 MsG0880043077.01.T01:intron 30.0%
TAAAGATATGCGTGAAACTA+AGG - Chr8:18615243-18615262 None:intergenic 30.0%
TAATGCATGTACTGGAAAAA+TGG + Chr8:18615369-18615388 MsG0880043077.01.T01:CDS 30.0%
TATAGATCATGTCCAATGAT+AGG + Chr8:18616345-18616364 MsG0880043077.01.T01:intron 30.0%
TATTGGGATATACATCGTAT+TGG + Chr8:18616434-18616453 MsG0880043077.01.T01:intron 30.0%
TCAAAAATTGTATTGGAGGA+GGG - Chr8:18617105-18617124 None:intergenic 30.0%
TCAAACCAATTTCACAACTT+GGG - Chr8:18613656-18613675 None:intergenic 30.0%
TCAAACTGAAGCTTTCATAA+AGG - Chr8:18617941-18617960 None:intergenic 30.0%
TCACAGACAAACCAAAAATA+TGG - Chr8:18617243-18617262 None:intergenic 30.0%
TCTCATCAAGAAATAAGTAG+GGG - Chr8:18614375-18614394 None:intergenic 30.0%
TGACCATTTATGTGAAAGAA+TGG - Chr8:18614684-18614703 None:intergenic 30.0%
TGCACATTTCTCAGAAAAAT+GGG - Chr8:18618175-18618194 None:intergenic 30.0%
TGTCTCATCAAGAAATAAGT+AGG - Chr8:18614377-18614396 None:intergenic 30.0%
TGTTTACTAAAGTTGGACTT+AGG + Chr8:18613748-18613767 MsG0880043077.01.T01:intron 30.0%
TTAAGTAAATCGAATGGTAC+TGG + Chr8:18617623-18617642 MsG0880043077.01.T01:intron 30.0%
TTATACCATGTTCTGTTGTT+TGG + Chr8:18618950-18618969 MsG0880043077.01.T01:intron 30.0%
TTTCACAATGGAATTGTGAT+TGG + Chr8:18615879-18615898 MsG0880043077.01.T01:intron 30.0%
! AATCTCTCTTAATGGTTTTC+GGG + Chr8:18616381-18616400 MsG0880043077.01.T01:intron 30.0%
! ATGAGGAAGATTTTGTGTTA+TGG + Chr8:18617135-18617154 MsG0880043077.01.T01:intron 30.0%
! ATGCATTTTTCCAAGATTGT+AGG + Chr8:18617978-18617997 MsG0880043077.01.T01:intron 30.0%
! ATTTTATGGCAGAGAATATG+TGG + Chr8:18615829-18615848 MsG0880043077.01.T01:intron 30.0%
! CGAAAATCTGTACATTCTTT+TGG + Chr8:18615764-18615783 MsG0880043077.01.T01:intron 30.0%
! CTGCATAGAATGTTTTATGT+TGG + Chr8:18617866-18617885 MsG0880043077.01.T01:intron 30.0%
! CTTTTACAATACTTTTGGTC+TGG - Chr8:18617743-18617762 None:intergenic 30.0%
! GAATCTCTCTTAATGGTTTT+CGG + Chr8:18616380-18616399 MsG0880043077.01.T01:intron 30.0%
! GGGTGTATTATTGATGATAA+AGG + Chr8:18616680-18616699 MsG0880043077.01.T01:intron 30.0%
! GTGTTATTATTAGAGACCTT+AGG + Chr8:18615158-18615177 MsG0880043077.01.T01:intron 30.0%
! TAGGCGAGTTAACTTAATTT+TGG - Chr8:18617409-18617428 None:intergenic 30.0%
! TATTTACATTTTGTGGCTGT+GGG + Chr8:18616314-18616333 MsG0880043077.01.T01:intron 30.0%
! TCATAAACCCTCCATATTTT+TGG + Chr8:18617229-18617248 MsG0880043077.01.T01:intron 30.0%
! TTGGCTGTATTTACATTTTG+TGG + Chr8:18616307-18616326 MsG0880043077.01.T01:intron 30.0%
! TTTTTCACTATTGACAACAC+TGG - Chr8:18614054-18614073 None:intergenic 30.0%
!! ATATTTTTATCCGGTTTCAG+AGG + Chr8:18617824-18617843 MsG0880043077.01.T01:intron 30.0%
!! ATTGGTGCTACTAAACATAT+TGG - Chr8:18614552-18614571 None:intergenic 30.0%
!! GTAATGCTAATTTTTCAGTG+CGG - Chr8:18618224-18618243 None:intergenic 30.0%
!! TATTTATTCTCTGGCTCTAA+CGG + Chr8:18616764-18616783 MsG0880043077.01.T01:intron 30.0%
!! TATTTTTATCCGGTTTCAGA+GGG + Chr8:18617825-18617844 MsG0880043077.01.T01:intron 30.0%
!!! CACTTCATTATTTTTAAGGG+GGG + Chr8:18614274-18614293 MsG0880043077.01.T01:intron 30.0%
!!! CCACTTCATTATTTTTAAGG+GGG + Chr8:18614273-18614292 MsG0880043077.01.T01:intron 30.0%
!!! GAAGCATTTTTTCTTAGCAT+TGG + Chr8:18615622-18615641 MsG0880043077.01.T01:intron 30.0%
AAAAATACAATCAACTCCCC+CGG - Chr8:18615120-18615139 None:intergenic 35.0%
AAACACTGCACTTCCAATAA+TGG + Chr8:18613583-18613602 MsG0880043077.01.T01:CDS 35.0%
AACAATAAGAGATCCAGTTC+AGG - Chr8:18618748-18618767 None:intergenic 35.0%
AACTTCAAACAGGATGAGAA+GGG - Chr8:18614961-18614980 None:intergenic 35.0%
AAGCACCATACATATTCCAT+GGG + Chr8:18614853-18614872 MsG0880043077.01.T01:intron 35.0%
AATATCCACGCTATACATAG+CGG - Chr8:18614192-18614211 None:intergenic 35.0%
AATGAGCAGAGGAAAACTAA+TGG - Chr8:18614451-18614470 None:intergenic 35.0%
ACAAAATCTTCCTCATTTGG+GGG - Chr8:18617131-18617150 None:intergenic 35.0%
ACAATAAGAGATCCAGTTCA+GGG - Chr8:18618747-18618766 None:intergenic 35.0%
ACAGGGAACAATTCAATTTC+AGG + Chr8:18614981-18615000 MsG0880043077.01.T01:intron 35.0%
ACGATGTATATCCCAATAGT+TGG - Chr8:18616432-18616451 None:intergenic 35.0%
ACGCCATTCTTTCACATAAA+TGG + Chr8:18614678-18614697 MsG0880043077.01.T01:intron 35.0%
AGAAAACTCTCTCTATCAGA+TGG - Chr8:18615517-18615536 None:intergenic 35.0%
AGAAACTTGAATTGACTGCT+GGG + Chr8:18617339-18617358 MsG0880043077.01.T01:intron 35.0%
AGAAGTTGCTTGACGAAATT+TGG + Chr8:18619149-18619168 MsG0880043077.01.T01:three_prime_UTR 35.0%
AGTAACCCAAGTTGTGAAAT+TGG + Chr8:18613648-18613667 MsG0880043077.01.T01:intron 35.0%
AGTCTATAATGAATCTGGTC+TGG + Chr8:18617483-18617502 MsG0880043077.01.T01:intron 35.0%
AGTGGATAAAATCTTAAGGG+GGG - Chr8:18614258-18614277 None:intergenic 35.0%
ATCTAGCTGTCATGTTAGTT+TGG + Chr8:18614607-18614626 MsG0880043077.01.T01:intron 35.0%
ATGATTGATGTCTTGAGAGA+AGG + Chr8:18619075-18619094 MsG0880043077.01.T01:CDS 35.0%
ATGTACTGGAAAAATGGGAA+AGG + Chr8:18615375-18615394 MsG0880043077.01.T01:CDS 35.0%
ATTCCTTACAGGTATCTCTT+TGG + Chr8:18616288-18616307 MsG0880043077.01.T01:intron 35.0%
CAACACAGTTAACTGAATCA+GGG + Chr8:18616610-18616629 MsG0880043077.01.T01:intron 35.0%
CAAGAAAAGCAACAACCTAA+AGG - Chr8:18616220-18616239 None:intergenic 35.0%
CAATGGTGAGTTATACAGTA+AGG + Chr8:18615992-18616011 MsG0880043077.01.T01:CDS 35.0%
CACAAAATCTTCCTCATTTG+GGG - Chr8:18617132-18617151 None:intergenic 35.0%
CAGACAAACCAAAAATATGG+AGG - Chr8:18617240-18617259 None:intergenic 35.0%
CAGCGCTTAAAAATAAAGAC+AGG - Chr8:18615307-18615326 None:intergenic 35.0%
CAGGGAACAATTCAATTTCA+GGG + Chr8:18614982-18615001 MsG0880043077.01.T01:intron 35.0%
CCCCCTTAAAAATAATGAAG+TGG - Chr8:18614276-18614295 None:intergenic 35.0%
CCTTAAACTGCTTATAGGTT+CGG + Chr8:18613857-18613876 MsG0880043077.01.T01:intron 35.0%
CGAACCTATAAGCAGTTTAA+GGG - Chr8:18613859-18613878 None:intergenic 35.0%
CTCAAAAATTGTATTGGAGG+AGG - Chr8:18617106-18617125 None:intergenic 35.0%
GACTCTAATACCTACAATCT+TGG - Chr8:18617991-18618010 None:intergenic 35.0%
GAGAAAAATGCACTACTTGT+TGG - Chr8:18618792-18618811 None:intergenic 35.0%
GATCGAGTCTATAATGAATC+TGG + Chr8:18617478-18617497 MsG0880043077.01.T01:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG - Chr8:18617112-18617131 None:intergenic 35.0%
GGTCCTATGAAGTTAATAGT+GGG + Chr8:18614729-18614748 MsG0880043077.01.T01:intron 35.0%
GGTTTATGAAAGGAAGACTA+AGG - Chr8:18617218-18617237 None:intergenic 35.0%
GTATATGAATGAATGAGCAG+AGG - Chr8:18614462-18614481 None:intergenic 35.0%
GTGTGATAGTCGTGAAAAAT+AGG - Chr8:18616161-18616180 None:intergenic 35.0%
TAACTTCAAACAGGATGAGA+AGG - Chr8:18614962-18614981 None:intergenic 35.0%
TAAGCACCATACATATTCCA+TGG + Chr8:18614852-18614871 MsG0880043077.01.T01:intron 35.0%
TACAAAATCGGACATGTATG+TGG + Chr8:18615696-18615715 MsG0880043077.01.T01:intron 35.0%
TAGAAACTTGAATTGACTGC+TGG + Chr8:18617338-18617357 MsG0880043077.01.T01:intron 35.0%
TATGTGAAAGAATGGCGTAT+TGG - Chr8:18614676-18614695 None:intergenic 35.0%
TCATCAACTTTCATGAGTAC+TGG - Chr8:18614523-18614542 None:intergenic 35.0%
TCTTGCAGCTATGGAAATTA+TGG + Chr8:18616235-18616254 MsG0880043077.01.T01:CDS 35.0%
TGCACTGAATAATGCATTTG+AGG + Chr8:18617449-18617468 MsG0880043077.01.T01:intron 35.0%
TGCTACATTGTAGTGCTATA+TGG + Chr8:18614093-18614112 MsG0880043077.01.T01:intron 35.0%
TGGTCCTATGAAGTTAATAG+TGG + Chr8:18614728-18614747 MsG0880043077.01.T01:intron 35.0%
TGTAACGACCAACATTAACA+GGG - Chr8:18614807-18614826 None:intergenic 35.0%
! AGAAGAAAGAGAGGTTGTTT+TGG - Chr8:18613433-18613452 None:intergenic 35.0%
! GCTGCTGACATTGAAATTTT+TGG - Chr8:18613518-18613537 None:intergenic 35.0%
! GTATTTACATTTTGTGGCTG+TGG + Chr8:18616313-18616332 MsG0880043077.01.T01:intron 35.0%
! TACATACCATTGACTGCATT+TGG - Chr8:18615592-18615611 None:intergenic 35.0%
! TATTGCTACTAGTCTGTGAT+TGG + Chr8:18617800-18617819 MsG0880043077.01.T01:intron 35.0%
! TCATCCTGTTTGAAGTTACA+GGG + Chr8:18614964-18614983 MsG0880043077.01.T01:intron 35.0%
! TGACAGCTAGATTTTTGATC+TGG - Chr8:18614599-18614618 None:intergenic 35.0%
! TGTTGCTTACAAAACTAGAG+GGG - Chr8:18614345-18614364 None:intergenic 35.0%
! TTTAGAGTCTCGTCTTTATG+CGG - Chr8:18616484-18616503 None:intergenic 35.0%
! TTTTGCCCATGGAATATGTA+TGG - Chr8:18614861-18614880 None:intergenic 35.0%
!! AGTGTTGCTTACAAAACTAG+AGG - Chr8:18614347-18614366 None:intergenic 35.0%
!! ATTGATTCATTCCCTTTTCC+AGG + Chr8:18615969-18615988 MsG0880043077.01.T01:intron 35.0%
!! GTGTTGCTTACAAAACTAGA+GGG - Chr8:18614346-18614365 None:intergenic 35.0%
!! TGTGCTATTTCTTGCTAAGA+AGG + Chr8:18618605-18618624 MsG0880043077.01.T01:CDS 35.0%
!! TTAGGCTTTGTTTGTGAGTT+TGG + Chr8:18616882-18616901 MsG0880043077.01.T01:intron 35.0%
!! TTTCGGGTCACAATTTTCTT+TGG + Chr8:18616397-18616416 MsG0880043077.01.T01:intron 35.0%
!!! CTGTCTTTATTTTTAAGCGC+TGG + Chr8:18615305-18615324 MsG0880043077.01.T01:intron 35.0%
AACTCTGGCGCAACTAAAAT+TGG - Chr8:18614708-18614727 None:intergenic 40.0%
AACTTCATAGGACCAAACTC+TGG - Chr8:18614723-18614742 None:intergenic 40.0%
ACAGTACCAAATGCAGTCAA+TGG + Chr8:18615583-18615602 MsG0880043077.01.T01:CDS 40.0%
AGAGAATATGTGGCTGTACT+TGG + Chr8:18615839-18615858 MsG0880043077.01.T01:intron 40.0%
AGGGAAAATATAGCAGCGTA+AGG - Chr8:18616200-18616219 None:intergenic 40.0%
ATAATGAATCTGGTCTGGTC+TGG + Chr8:18617488-18617507 MsG0880043077.01.T01:intron 40.0%
ATCCATCAGAGAGATAGAGA+GGG - Chr8:18616806-18616825 None:intergenic 40.0%
ATGCATGCAGATTGAAGCAA+AGG + Chr8:18619032-18619051 MsG0880043077.01.T01:intron 40.0%
ATGGTATAACGCCATCTTCT+GGG - Chr8:18618939-18618958 None:intergenic 40.0%
ATTATGGCAGAGCAATTTCC+TGG + Chr8:18616251-18616270 MsG0880043077.01.T01:CDS 40.0%
ATTATTAGAGACCTTAGGGG+AGG + Chr8:18615163-18615182 MsG0880043077.01.T01:intron 40.0%
CACAAAACCTTGTCAAACAG+CGG - Chr8:18614128-18614147 None:intergenic 40.0%
CAGCCCACTATTAACTTCAT+AGG - Chr8:18614735-18614754 None:intergenic 40.0%
CATCAAGAAATAAGTAGGGG+AGG - Chr8:18614372-18614391 None:intergenic 40.0%
CCAACACAGTTAACTGAATC+AGG + Chr8:18616609-18616628 MsG0880043077.01.T01:intron 40.0%
CCGAACCTATAAGCAGTTTA+AGG - Chr8:18613860-18613879 None:intergenic 40.0%
CCTGATTCAGTTAACTGTGT+TGG - Chr8:18616612-18616631 None:intergenic 40.0%
CGTTATTGGAGAAGAAAGAG+AGG - Chr8:18613442-18613461 None:intergenic 40.0%
CTGTAACGACCAACATTAAC+AGG - Chr8:18614808-18614827 None:intergenic 40.0%
CTGTAAGGAATACCCAGAAA+AGG - Chr8:18616279-18616298 None:intergenic 40.0%
GAAAAATAGGAAAGTCGTCG+AGG - Chr8:18616148-18616167 None:intergenic 40.0%
GAAAGTCCGGTAAGAATTTG+TGG - Chr8:18618271-18618290 None:intergenic 40.0%
GCTTAGGTTAATGCATGTAC+TGG + Chr8:18615361-18615380 MsG0880043077.01.T01:intron 40.0%
GGGAATGTAGCTAAGGATAA+GGG - Chr8:18617268-18617287 None:intergenic 40.0%
GGTGAGTTATACAGTAAGGT+CGG + Chr8:18615996-18616015 MsG0880043077.01.T01:CDS 40.0%
GTGAGTTATACAGTAAGGTC+GGG + Chr8:18615997-18616016 MsG0880043077.01.T01:CDS 40.0%
GTGGATAAAATCTTAAGGGG+GGG - Chr8:18614257-18614276 None:intergenic 40.0%
GTGGGAAATATAGGGAGAAA+TGG + Chr8:18616933-18616952 MsG0880043077.01.T01:intron 40.0%
GTGTGTTAGATCACATTGCA+TGG + Chr8:18618102-18618121 MsG0880043077.01.T01:intron 40.0%
GTTGCTTACAAAACTAGAGG+GGG - Chr8:18614344-18614363 None:intergenic 40.0%
TACAATTGATAAGAGACCCC+AGG + Chr8:18618319-18618338 MsG0880043077.01.T01:CDS 40.0%
TATCTCGACCCTGTTAATGT+TGG + Chr8:18614796-18614815 MsG0880043077.01.T01:intron 40.0%
TCATGCCAAACAACAGAACA+TGG - Chr8:18618958-18618977 None:intergenic 40.0%
TGAGTTATACAGTAAGGTCG+GGG + Chr8:18615998-18616017 MsG0880043077.01.T01:CDS 40.0%
TGGGAATGTAGCTAAGGATA+AGG - Chr8:18617269-18617288 None:intergenic 40.0%
TGTTCCCTGTAACTTCAAAC+AGG - Chr8:18614971-18614990 None:intergenic 40.0%
TTACCTGCTTTCCCATTTGT+GGG - Chr8:18616109-18616128 None:intergenic 40.0%
TTTACCTGCTTTCCCATTTG+TGG - Chr8:18616110-18616129 None:intergenic 40.0%
TTTCGTCAAGCAACTTCTAC+AGG - Chr8:18619147-18619166 None:intergenic 40.0%
! AATGTTGTTCCTGTGTCGTT+TGG + Chr8:18615430-18615449 MsG0880043077.01.T01:CDS 40.0%
! AATTTCCTGGAGCCTTTTCT+GGG + Chr8:18616264-18616283 MsG0880043077.01.T01:CDS 40.0%
! AGAGATAGAGAGGGTATGAT+GGG - Chr8:18616797-18616816 None:intergenic 40.0%
! AGTACTGGAATTCTGTTGAG+GGG - Chr8:18614508-18614527 None:intergenic 40.0%
! ATCTCCTCTTCTGAGAAATG+GGG - Chr8:18613484-18613503 None:intergenic 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - Chr8:18617099-18617118 None:intergenic 40.0%
! CGCTGCTATATTTTCCCTTT+AGG + Chr8:18616202-18616221 MsG0880043077.01.T01:intron 40.0%
! CTCATCCTGTTTGAAGTTAC+AGG + Chr8:18614963-18614982 MsG0880043077.01.T01:intron 40.0%
! CTTTGTTTGTGAGTTTGGAG+GGG + Chr8:18616887-18616906 MsG0880043077.01.T01:intron 40.0%
! CTTTTCTGGGTATTCCTTAC+AGG + Chr8:18616277-18616296 MsG0880043077.01.T01:CDS 40.0%
! GATCTCCTCTTCTGAGAAAT+GGG - Chr8:18613485-18613504 None:intergenic 40.0%
! GTGCATGATTTTATGTTGGC+TGG + Chr8:18618190-18618209 MsG0880043077.01.T01:intron 40.0%
! GTTGTGGAACACATTTGTTG+CGG - Chr8:18613411-18613430 None:intergenic 40.0%
! TGTTTCATCTCTTTTGCCCA+TGG - Chr8:18614872-18614891 None:intergenic 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - Chr8:18617098-18617117 None:intergenic 40.0%
! TTGTGATGGGAATGTAGCTA+AGG - Chr8:18617275-18617294 None:intergenic 40.0%
! TTTTGGTCTGGCAATAAGTC+TGG - Chr8:18617731-18617750 None:intergenic 40.0%
!! ACGTCTCTGGAATTTCACAA+TGG + Chr8:18615867-18615886 MsG0880043077.01.T01:intron 40.0%
!! ATGTTGTTCCTGTGTCGTTT+GGG + Chr8:18615431-18615450 MsG0880043077.01.T01:CDS 40.0%
!! CAAGATTTACCCTCTGAAAC+CGG - Chr8:18617837-18617856 None:intergenic 40.0%
!! GAGTACTGGAATTCTGTTGA+GGG - Chr8:18614509-18614528 None:intergenic 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG + Chr8:18616886-18616905 MsG0880043077.01.T01:intron 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - Chr8:18617200-18617219 None:intergenic 40.0%
!! TGAGTACTGGAATTCTGTTG+AGG - Chr8:18614510-18614529 None:intergenic 40.0%
!! TTGCTTTTATGCACATGGTC+TGG + Chr8:18617575-18617594 MsG0880043077.01.T01:intron 40.0%
!!! AAGAGAGGTTGTTTTGGTTG+TGG - Chr8:18613427-18613446 None:intergenic 40.0%
!!! ATTTTAGTTGCGCCAGAGTT+TGG + Chr8:18614708-18614727 MsG0880043077.01.T01:intron 40.0%
!!! GTGGTTTGCTTTTATGCACA+TGG + Chr8:18617570-18617589 MsG0880043077.01.T01:intron 40.0%
!!! TGTTGCTTTTCTTGCAGCTA+TGG + Chr8:18616226-18616245 MsG0880043077.01.T01:CDS 40.0%
!!! TTTTAGAGAGTACTGTCCTG+TGG + Chr8:18617655-18617674 MsG0880043077.01.T01:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + Chr8:18617118-18617137 MsG0880043077.01.T01:intron 40.0%
AAAGCCTAAGAAGACCAGTG+AGG - Chr8:18616871-18616890 None:intergenic 45.0%
AACTCACCATTGCCTGGAAA+AGG - Chr8:18615984-18616003 None:intergenic 45.0%
AAGCAGTTTAAGGGCCTGTT+TGG - Chr8:18613850-18613869 None:intergenic 45.0%
ACAAGGTTGAACACCAGACT+AGG - Chr8:18617601-18617620 None:intergenic 45.0%
ACACATCCCTAGCAACTTAG+CGG + Chr8:18614398-18614417 MsG0880043077.01.T01:intron 45.0%
ACTCACCATTGCCTGGAAAA+GGG - Chr8:18615983-18616002 None:intergenic 45.0%
ACTTACATTGACCTCCCCTA+AGG - Chr8:18615177-18615196 None:intergenic 45.0%
ACTTCCCCATTTCTCAGAAG+AGG + Chr8:18613477-18613496 MsG0880043077.01.T01:CDS 45.0%
ACTTGGGGCTTCTTTCGATA+TGG + Chr8:18618074-18618093 MsG0880043077.01.T01:CDS 45.0%
AGGCAACAAGTCGAAATGGT+GGG + Chr8:18618339-18618358 MsG0880043077.01.T01:CDS 45.0%
ATTAATGCAGCAGAAGCTGC+TGG + Chr8:18615403-18615422 MsG0880043077.01.T01:CDS 45.0%
CAGCCAAAGAGATACCTGTA+AGG - Chr8:18616294-18616313 None:intergenic 45.0%
CAGGCCCTTAAACTGCTTAT+AGG + Chr8:18613852-18613871 MsG0880043077.01.T01:intron 45.0%
CATGGTATAACGCCATCTTC+TGG - Chr8:18618940-18618959 None:intergenic 45.0%
CTGTATAACTCACCATTGCC+TGG - Chr8:18615990-18616009 None:intergenic 45.0%
GAAATCCGCTATGTATAGCG+TGG + Chr8:18614184-18614203 MsG0880043077.01.T01:intron 45.0%
GAAGCAAGATATCACAGCCT+TGG - Chr8:18618049-18618068 None:intergenic 45.0%
GATCCATCAGAGAGATAGAG+AGG - Chr8:18616807-18616826 None:intergenic 45.0%
GCAATGTGATCTAACACACC+TGG - Chr8:18618101-18618120 None:intergenic 45.0%
GCTGTGATATCCCCACAAAT+GGG + Chr8:18616095-18616114 MsG0880043077.01.T01:CDS 45.0%
GGTAGATCAATATACGCCGA+GGG + Chr8:18618570-18618589 MsG0880043077.01.T01:CDS 45.0%
GGTGATGAACAACACGTAAG+AGG - Chr8:18618726-18618745 None:intergenic 45.0%
GGTTCACTCTGCCAACTATT+GGG + Chr8:18616418-18616437 MsG0880043077.01.T01:intron 45.0%
GTACGCACACACAGGTTTAT+AGG - Chr8:18617428-18617447 None:intergenic 45.0%
GTGAAAGAATGGCGTATTGG+CGG - Chr8:18614673-18614692 None:intergenic 45.0%
GTGAAATTCCAGAGACGTGA+AGG - Chr8:18615865-18615884 None:intergenic 45.0%
TACCCTCTCTATCTCTCTGA+TGG + Chr8:18616801-18616820 MsG0880043077.01.T01:intron 45.0%
TACCTGCTTTCCCATTTGTG+GGG - Chr8:18616108-18616127 None:intergenic 45.0%
TCTCCAATAACGCCACTACA+AGG + Chr8:18613450-18613469 MsG0880043077.01.T01:CDS 45.0%
TCTCCTTGTAGTGGCGTTAT+TGG - Chr8:18613456-18613475 None:intergenic 45.0%
TGACCAAGCTACGTGAAAAC+CGG + Chr8:18615098-18615117 MsG0880043077.01.T01:intron 45.0%
TGCTGTGATATCCCCACAAA+TGG + Chr8:18616094-18616113 MsG0880043077.01.T01:CDS 45.0%
TGGAAAGAAGGAGGAAAGTC+CGG - Chr8:18618284-18618303 None:intergenic 45.0%
TGGTAGATCAATATACGCCG+AGG + Chr8:18618569-18618588 MsG0880043077.01.T01:CDS 45.0%
TGGTTCACTCTGCCAACTAT+TGG + Chr8:18616417-18616436 MsG0880043077.01.T01:intron 45.0%
TGTTGTTCATCACCCTGAAC+TGG + Chr8:18618732-18618751 MsG0880043077.01.T01:intron 45.0%
TTTGGGGGGTGGGAAATATA+GGG + Chr8:18616925-18616944 MsG0880043077.01.T01:intron 45.0%
TTTGGGTGTGAAGAAGAGTC+CGG + Chr8:18615448-18615467 MsG0880043077.01.T01:CDS 45.0%
! CAATTTCCTGGAGCCTTTTC+TGG + Chr8:18616263-18616282 MsG0880043077.01.T01:CDS 45.0%
! CGATCTCCTCTTCTGAGAAA+TGG - Chr8:18613486-18613505 None:intergenic 45.0%
! CTCGTCTTTATGCGGTTTTG+TGG - Chr8:18616476-18616495 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - Chr8:18617195-18617214 None:intergenic 45.0%
! GAGAGATAGAGAGGGTATGA+TGG - Chr8:18616798-18616817 None:intergenic 45.0%
! TCATTCCCTTTTCCAGGCAA+TGG + Chr8:18615975-18615994 MsG0880043077.01.T01:intron 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - Chr8:18617097-18617116 None:intergenic 45.0%
!! ACCATTTCGACTTGTTGCCT+GGG - Chr8:18618339-18618358 None:intergenic 45.0%
!! AGTGCAGTGTTTTGAGCTGA+AGG - Chr8:18613575-18613594 None:intergenic 45.0%
!! GCAAGCAAAGTTGATGCATC+TGG + Chr8:18618018-18618037 MsG0880043077.01.T01:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - Chr8:18617196-18617215 None:intergenic 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG + Chr8:18616885-18616904 MsG0880043077.01.T01:intron 45.0%
!!! AGACTTTTGAGGTCTGTGGA+AGG + Chr8:18615473-18615492 MsG0880043077.01.T01:CDS 45.0%
!!! GACTTTTGAGGTCTGTGGAA+GGG + Chr8:18615474-18615493 MsG0880043077.01.T01:CDS 45.0%
AATTACAATCCGCGCTCCAC+AGG - Chr8:18617674-18617693 None:intergenic 50.0%
AATTGACTGCTGGGCAAGCA+TGG + Chr8:18617348-18617367 MsG0880043077.01.T01:intron 50.0%
ACAGACCTCAAAAGTCTGCC+CGG - Chr8:18615470-18615489 None:intergenic 50.0%
ACCAACTCCGCTAAGTTGCT+AGG - Chr8:18614408-18614427 None:intergenic 50.0%
ACCAAGCTACGTGAAAACCG+GGG + Chr8:18615100-18615119 MsG0880043077.01.T01:intron 50.0%
ATCCCCACAAATGGGAAAGC+AGG + Chr8:18616103-18616122 MsG0880043077.01.T01:CDS 50.0%
ATCGGACATGTATGTGGCAG+AGG + Chr8:18615702-18615721 MsG0880043077.01.T01:intron 50.0%
CAGGCAACAAGTCGAAATGG+TGG + Chr8:18618338-18618357 MsG0880043077.01.T01:CDS 50.0%
CCAACTCCGCTAAGTTGCTA+GGG - Chr8:18614407-18614426 None:intergenic 50.0%
CCAGTTGTCCCCATCACAAA+GGG - Chr8:18616026-18616045 None:intergenic 50.0%
GAATACCCAGAAAAGGCTCC+AGG - Chr8:18616272-18616291 None:intergenic 50.0%
GACCAAGCTACGTGAAAACC+GGG + Chr8:18615099-18615118 MsG0880043077.01.T01:intron 50.0%
GACCTGACAAATGCTCCTCT+GGG - Chr8:18618368-18618387 None:intergenic 50.0%
GGCTTCTTTCGATATGGACC+AGG + Chr8:18618080-18618099 MsG0880043077.01.T01:CDS 50.0%
GGGGAAGTTTCTCCTTGTAG+TGG - Chr8:18613465-18613484 None:intergenic 50.0%
GTTGTTGCCGCTGTTTGACA+AGG + Chr8:18614118-18614137 MsG0880043077.01.T01:intron 50.0%
GTTTGTGAGTTTGGAGGGGA+GGG + Chr8:18616891-18616910 MsG0880043077.01.T01:intron 50.0%
TATCAGATGGACCGTGCACA+AGG - Chr8:18615504-18615523 None:intergenic 50.0%
TCAGAAGAGGAGATCGCGTT+TGG + Chr8:18613490-18613509 MsG0880043077.01.T01:CDS 50.0%
TCTTCACACCCAAACGACAC+AGG - Chr8:18615442-18615461 None:intergenic 50.0%
TGACCTGACAAATGCTCCTC+TGG - Chr8:18618369-18618388 None:intergenic 50.0%
TGTTTGTGAGTTTGGAGGGG+AGG + Chr8:18616890-18616909 MsG0880043077.01.T01:intron 50.0%
TTGGGTGTGAAGAAGAGTCC+GGG + Chr8:18615449-18615468 MsG0880043077.01.T01:CDS 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - Chr8:18617190-18617209 None:intergenic 50.0%
TTTGTGAGTTTGGAGGGGAG+GGG + Chr8:18616892-18616911 MsG0880043077.01.T01:intron 50.0%
! CTTTGGGGGGTGGGAAATAT+AGG + Chr8:18616924-18616943 MsG0880043077.01.T01:intron 50.0%
! GGAAAGTCGTCGAGGTTTTC+AGG - Chr8:18616140-18616159 None:intergenic 50.0%
! GTGGAGCGCGGATTGTAATT+TGG + Chr8:18617674-18617693 MsG0880043077.01.T01:intron 50.0%
! TGATGCATCTGGAACTGCCA+AGG + Chr8:18618029-18618048 MsG0880043077.01.T01:CDS 50.0%
! TTTGTGATGGGGACAACTGG+CGG + Chr8:18616026-18616045 MsG0880043077.01.T01:CDS 50.0%
!! CACCATTTCGACTTGTTGCC+TGG - Chr8:18618340-18618359 None:intergenic 50.0%
!! CCATTTCGACTTGTTGCCTG+GGG - Chr8:18618338-18618357 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - Chr8:18617197-18617216 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - Chr8:18617096-18617115 None:intergenic 50.0%
!! TGCGGTTTTGTGGACATGCT+TGG - Chr8:18616466-18616485 None:intergenic 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - Chr8:18617095-18617114 None:intergenic 50.0%
AGAAGACCAGTGAGGTGGCT+AGG - Chr8:18616863-18616882 None:intergenic 55.0%
AGGGGAAGGGAAGACTTTGG+GGG + Chr8:18616910-18616929 MsG0880043077.01.T01:intron 55.0%
AGTTGGACTTAGGGCCCGTT+TGG + Chr8:18613758-18613777 MsG0880043077.01.T01:intron 55.0%
CACAGCATCAACTGTGCCCT+CGG - Chr8:18618589-18618608 None:intergenic 55.0%
CAGTGCAAGTACGCACACAC+AGG - Chr8:18617436-18617455 None:intergenic 55.0%
CCAAGCTACGTGAAAACCGG+GGG + Chr8:18615101-18615120 MsG0880043077.01.T01:intron 55.0%
CCCCAGGCAACAAGTCGAAA+TGG + Chr8:18618335-18618354 MsG0880043077.01.T01:CDS 55.0%
CCCTAGCAACTTAGCGGAGT+TGG + Chr8:18614404-18614423 MsG0880043077.01.T01:intron 55.0%
GACTTAGGGCCCGTTTGGAT+TGG + Chr8:18613763-18613782 MsG0880043077.01.T01:intron 55.0%
GAGGGGAAGGGAAGACTTTG+GGG + Chr8:18616909-18616928 MsG0880043077.01.T01:intron 55.0%
GCCAGTTGTCCCCATCACAA+AGG - Chr8:18616027-18616046 None:intergenic 55.0%
GCCTAAGAAGACCAGTGAGG+TGG - Chr8:18616868-18616887 None:intergenic 55.0%
GGAAGGGAGTTCCTTGTGCA+CGG + Chr8:18615490-18615509 MsG0880043077.01.T01:CDS 55.0%
GGAGGGGAAGGGAAGACTTT+GGG + Chr8:18616908-18616927 MsG0880043077.01.T01:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - Chr8:18617191-18617210 None:intergenic 55.0%
TGGTCTGGTCTGCATGCACT+CGG + Chr8:18617503-18617522 MsG0880043077.01.T01:intron 55.0%
! AAGAATGGCGTATTGGCGGC+AGG - Chr8:18614669-18614688 None:intergenic 55.0%
! AAGGGAAGACTTTGGGGGGT+GGG + Chr8:18616915-18616934 MsG0880043077.01.T01:intron 55.0%
! AGAGTCCGGGCAGACTTTTG+AGG + Chr8:18615462-18615481 MsG0880043077.01.T01:CDS 55.0%
! CCCTTTGTGATGGGGACAAC+TGG + Chr8:18616023-18616042 MsG0880043077.01.T01:CDS 55.0%
! GTACTTGGCCTTCACGTCTC+TGG + Chr8:18615854-18615873 MsG0880043077.01.T01:intron 55.0%
! GTCGGGGTACCCTTTGTGAT+GGG + Chr8:18616014-18616033 MsG0880043077.01.T01:CDS 55.0%
! TCGGGGTACCCTTTGTGATG+GGG + Chr8:18616015-18616034 MsG0880043077.01.T01:CDS 55.0%
!! GCCACCTCACTGGTCTTCTT+AGG + Chr8:18616864-18616883 MsG0880043077.01.T01:intron 55.0%
!! GTCCCAGAGGAGCATTTGTC+AGG + Chr8:18618363-18618382 MsG0880043077.01.T01:CDS 55.0%
!!! GGGCAGACTTTTGAGGTCTG+TGG + Chr8:18615469-18615488 MsG0880043077.01.T01:CDS 55.0%
CCAGTGAGGTGGCTAGGTAG+CGG - Chr8:18616857-18616876 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - Chr8:18617186-18617205 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - Chr8:18617185-18617204 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + Chr8:18616897-18616916 MsG0880043077.01.T01:intron 60.0%
GCACATGGTCTGGCCTAGTC+TGG + Chr8:18617585-18617604 MsG0880043077.01.T01:intron 60.0%
GGGAGGGGAAGGGAAGACTT+TGG + Chr8:18616907-18616926 MsG0880043077.01.T01:intron 60.0%
GGGGAAGGGAAGACTTTGGG+GGG + Chr8:18616911-18616930 MsG0880043077.01.T01:intron 60.0%
TGAGTTTGGAGGGGAGGGGA+AGG + Chr8:18616896-18616915 MsG0880043077.01.T01:intron 60.0%
! CCCCCGGTTTTCACGTAGCT+TGG - Chr8:18615104-18615123 None:intergenic 60.0%
! CGAAATGGTGGGAGTCCCAG+AGG + Chr8:18618350-18618369 MsG0880043077.01.T01:CDS 60.0%
! GAAGGGAAGACTTTGGGGGG+TGG + Chr8:18616914-18616933 MsG0880043077.01.T01:intron 60.0%
! GAGTACTGTCCTGTGGAGCG+CGG + Chr8:18617662-18617681 MsG0880043077.01.T01:intron 60.0%
! GGTCGGGGTACCCTTTGTGA+TGG + Chr8:18616013-18616032 MsG0880043077.01.T01:CDS 60.0%
CCGCTACCTAGCCACCTCAC+TGG + Chr8:18616854-18616873 MsG0880043077.01.T01:intron 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - Chr8:18617173-18617192 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - Chr8:18617187-18617206 None:intergenic 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - Chr8:18617174-18617193 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - Chr8:18617181-18617200 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - Chr8:18617182-18617201 None:intergenic 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - Chr8:18617172-18617191 None:intergenic 65.0%
GGGAAGGGAGGGGAGGGCTT+TGG - Chr8:18617175-18617194 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 18613386 18619349 18613386 ID=MsG0880043077.01;Name=MsG0880043077.01
Chr8 mRNA 18613386 18619349 18613386 ID=MsG0880043077.01.T01;Parent=MsG0880043077.01;Name=MsG0880043077.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.71|0.75|1|0.71|0.62|8|239|366
Chr8 exon 18613386 18613640 18613386 ID=MsG0880043077.01.T01:exon:4884;Parent=MsG0880043077.01.T01
Chr8 exon 18615367 18615604 18615367 ID=MsG0880043077.01.T01:exon:4885;Parent=MsG0880043077.01.T01
Chr8 exon 18615991 18616124 18615991 ID=MsG0880043077.01.T01:exon:4886;Parent=MsG0880043077.01.T01
Chr8 exon 18616224 18616298 18616224 ID=MsG0880043077.01.T01:exon:4887;Parent=MsG0880043077.01.T01
Chr8 exon 18618000 18618101 18618000 ID=MsG0880043077.01.T01:exon:4888;Parent=MsG0880043077.01.T01
Chr8 exon 18618318 18618427 18618318 ID=MsG0880043077.01.T01:exon:4889;Parent=MsG0880043077.01.T01
Chr8 exon 18618539 18618656 18618539 ID=MsG0880043077.01.T01:exon:4890;Parent=MsG0880043077.01.T01
Chr8 exon 18619042 18619349 18619042 ID=MsG0880043077.01.T01:exon:4891;Parent=MsG0880043077.01.T01
Chr8 CDS 18613386 18613640 18613386 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18615367 18615604 18615367 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18615991 18616124 18615991 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18616224 18616298 18616224 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18618000 18618101 18618000 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18618318 18618427 18618318 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18618539 18618656 18618539 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 CDS 18619042 18619110 18619042 ID=MsG0880043077.01.T01:cds;Parent=MsG0880043077.01.T01
Chr8 three_prime_UTR 18619111 18619349 18619111 ID=MsG0880043077.01.T01:three_prime_utr;Parent=MsG0880043077.01.T01
Gene Sequence

>MsG0880043077.01.T01

ATGTCAACATTCACGCTCAAAACCGCAACAAATGTGTTCCACAACCAAAACAACCTCTCTTTCTTCTCCAATAACGCCACTACAAGGAGAAACTTCCCCATTTCTCAGAAGAGGAGATCGCGTTTGGTACCAAAAATTTCAATGTCAGCAGCTACAAATGTTCAAACTTTTCTTGAAAAGTCTGCACCTTCAGCTCAAAACACTGCACTTCCAATAATGGTGATTATCTATAACTTGTTTCAATGCTCAAGTTTTGTTAATGCATGTACTGGAAAAATGGGAAAGGCTGTCATTAATGCAGCAGAAGCTGCTGGACTGAATGTTGTTCCTGTGTCGTTTGGGTGTGAAGAAGAGTCCGGGCAGACTTTTGAGGTCTGTGGAAGGGAGTTCCTTGTGCACGGTCCATCTGATAGAGAGAGTTTTCTTGAGTCCGTCCTTGATAAATATCCAAATTTAATTATTGTGGACTACACAGTACCAAATGCAGTCAATGGCAATGGTGAGTTATACAGTAAGGTCGGGGTACCCTTTGTGATGGGGACAACTGGCGGAGATAGAGACTTGTTGTATAAGACTGTTGAAGACTCAAAGAATTATGCTGTGATATCCCCACAAATGGGAAAGCAGGTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCAGAGCAATTTCCTGGAGCCTTTTCTGGGTATTCCTTACAGGTATTAGAGTCTCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCCAAGGCTGTGATATCTTGCTTCAATAAACTTGGGGCTTCTTTCGATATGGACCAGATACAATTGATAAGAGACCCCAGGCAACAAGTCGAAATGGTGGGAGTCCCAGAGGAGCATTTGTCAGGTCACGCGTTTCATATGTATCATTTGACATCACCAGATGAAACAGTTTCATTTGAATTTCAACATAATGTCTGTGGTAGATCAATATACGCCGAGGGCACAGTTGATGCTGTGCTATTTCTTGCTAAGAAGGTGCTTATACGTTCATTCAGATTACCTCTTATTGAAGCAAAGGATCCCAAGAGAATATACAACATGATTGATGTCTTGAGAGAAGGAAGTATGAGATAA
Protein sequence

>MsG0880043077.01.T01

MSTFTLKTATNVFHNQNNLSFFSNNATTRRNFPISQKRRSRLVPKISMSAATNVQTFLEKSAPSAQNTALPIMVIIYNLFQCSSFVNACTGKMGKAVINAAEAAGLNVVPVSFGCEEESGQTFEVCGREFLVHGPSDRESFLESVLDKYPNLIIVDYTVPNAVNGNGELYSKVGVPFVMGTTGGDRDLLYKTVEDSKNYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGASFDMDQIQLIRDPRQQVEMVGVPEEHLSGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAVLFLAKKVLIRSFRLPLIEAKDPKRIYNMIDVLREGSMR*