Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006769.01.T01 | XP_003593643.1 | 97.654 | 341 | 8 | 0 | 1 | 341 | 1 | 341 | 0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006769.01.T01 | Q9D832 | 44.509 | 346 | 165 | 10 | 1 | 338 | 1 | 327 | 6.07E-79 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006769.01.T01 | A2Q503 | 97.654 | 341 | 8 | 0 | 1 | 341 | 1 | 341 | 0.0 | 692 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048874.01 | MsG0280006769.01 | 0.801223 | 9.963955e-49 | 4.732715e-46 |
| MsG0180000091.01 | MsG0280006769.01 | 0.813473 | 2.514888e-51 | 1.643934e-48 |
| MsG0180000241.01 | MsG0280006769.01 | 0.813291 | 2.757607e-51 | 1.793601e-48 |
| MsG0180000470.01 | MsG0280006769.01 | 0.823573 | 1.288102e-53 | 1.113327e-50 |
| MsG0180000650.01 | MsG0280006769.01 | 0.804928 | 1.707173e-49 | 8.914781e-47 |
| MsG0180001063.01 | MsG0280006769.01 | 0.838773 | 2.356095e-57 | 3.188180e-54 |
| MsG0180002842.01 | MsG0280006769.01 | 0.823802 | 1.138392e-53 | 9.903942e-51 |
| MsG0180003673.01 | MsG0280006769.01 | 0.802052 | 6.734937e-49 | 3.266843e-46 |
| MsG0180003686.01 | MsG0280006769.01 | 0.805123 | 1.553920e-49 | 8.154904e-47 |
| MsG0180004465.01 | MsG0280006769.01 | 0.803414 | 3.526325e-49 | 1.770953e-46 |
| MsG0180004537.01 | MsG0280006769.01 | 0.833402 | 5.445774e-56 | 6.264711e-53 |
| MsG0180004620.01 | MsG0280006769.01 | 0.810931 | 9.018114e-51 | 5.508515e-48 |
| MsG0180004765.01 | MsG0280006769.01 | 0.819179 | 1.330712e-52 | 1.016651e-49 |
| MsG0180005730.01 | MsG0280006769.01 | 0.821602 | 3.700612e-53 | 3.024382e-50 |
| MsG0180006144.01 | MsG0280006769.01 | 0.830551 | 2.754994e-55 | 2.912078e-52 |
| MsG0180006224.01 | MsG0280006769.01 | 0.801714 | 7.905351e-49 | 3.801597e-46 |
| MsG0180006257.01 | MsG0280006769.01 | 0.810819 | 9.533249e-51 | 5.805449e-48 |
| MsG0280006299.01 | MsG0280006769.01 | 0.802501 | 5.445428e-49 | 2.671640e-46 |
| MsG0280006769.01 | MsG0280006770.01 | 0.810983 | 8.786062e-51 | 5.374391e-48 |
| MsG0280006769.01 | MsG0280007547.01 | 0.807799 | 4.236427e-50 | 2.381928e-47 |
| MsG0280006769.01 | MsG0280007955.01 | 0.829291 | 5.588016e-55 | 5.695739e-52 |
| MsG0280006769.01 | MsG0280008112.01 | 0.829408 | 5.235221e-55 | 5.353722e-52 |
| MsG0280006769.01 | MsG0280008113.01 | 0.813502 | 2.477806e-51 | 1.620988e-48 |
| MsG0280006769.01 | MsG0280008615.01 | 0.811156 | 8.058987e-51 | 4.951522e-48 |
| MsG0280006769.01 | MsG0280010349.01 | 0.819801 | 9.596473e-53 | 7.460423e-50 |
| MsG0280006769.01 | MsG0280010443.01 | 0.807897 | 4.038207e-50 | 2.276180e-47 |
| MsG0280006769.01 | MsG0280010698.01 | 0.807355 | 5.264369e-50 | 2.925813e-47 |
| MsG0280006769.01 | MsG0280010712.01 | 0.820893 | 5.393071e-53 | 4.321680e-50 |
| MsG0280006769.01 | MsG0280010722.01 | 0.803280 | 3.758157e-49 | 1.880862e-46 |
| MsG0280006769.01 | MsG0280010736.01 | 0.814666 | 1.371732e-51 | 9.260622e-49 |
| MsG0280006769.01 | MsG0280011163.01 | 0.817694 | 2.887526e-52 | 2.117678e-49 |
| MsG0280006769.01 | MsG0280011305.01 | 0.821223 | 4.527003e-53 | 3.661181e-50 |
| MsG0280006769.01 | MsG0380011609.01 | 0.835425 | 1.691228e-56 | 2.067318e-53 |
| MsG0280006769.01 | MsG0380011895.01 | 0.806434 | 8.241575e-50 | 4.472808e-47 |
| MsG0280006769.01 | MsG0380014537.01 | 0.822478 | 2.318756e-53 | 1.943053e-50 |
| MsG0280006769.01 | MsG0380014573.01 | 0.805389 | 1.367017e-49 | 7.222919e-47 |
| MsG0280006769.01 | MsG0380014727.01 | 0.808453 | 3.074374e-50 | 1.758608e-47 |
| MsG0280006769.01 | MsG0380015196.01 | 0.809839 | 1.551373e-50 | 9.206211e-48 |
| MsG0280006769.01 | MsG0380015332.01 | 0.801749 | 7.774709e-49 | 3.742068e-46 |
| MsG0280006769.01 | MsG0380015555.01 | 0.825403 | 4.778444e-54 | 4.351087e-51 |
| MsG0280006769.01 | MsG0380015566.01 | 0.807303 | 5.398739e-50 | 2.996573e-47 |
| MsG0280006769.01 | MsG0380016004.01 | 0.813709 | 2.231329e-51 | 1.467954e-48 |
| MsG0280006769.01 | MsG0380016064.01 | 0.809708 | 1.655787e-50 | 9.791798e-48 |
| MsG0280006769.01 | MsG0380016191.01 | -0.808881 | 2.490396e-50 | 1.440506e-47 |
| MsG0280006769.01 | MsG0380016285.01 | 0.846939 | 1.584265e-59 | 2.771129e-56 |
| MsG0280006769.01 | MsG0380016910.01 | 0.818716 | 1.695007e-52 | 1.278528e-49 |
| MsG0280006769.01 | MsG0380017085.01 | 0.801036 | 1.088160e-48 | 5.144527e-46 |
| MsG0280006769.01 | MsG0380017220.01 | 0.803299 | 3.724458e-49 | 1.864897e-46 |
| MsG0280006769.01 | MsG0380017293.01 | 0.804341 | 2.263246e-49 | 1.164022e-46 |
| MsG0280006769.01 | MsG0380017543.01 | 0.815058 | 1.123127e-51 | 7.662848e-49 |
| MsG0280006769.01 | MsG0380018075.01 | 0.808561 | 2.914992e-50 | 1.672067e-47 |
| MsG0280006769.01 | MsG0480018128.01 | 0.803522 | 3.348665e-49 | 1.686507e-46 |
| MsG0280006769.01 | MsG0480018214.01 | 0.803715 | 3.054187e-49 | 1.545710e-46 |
| MsG0280006769.01 | MsG0480018236.01 | 0.843001 | 1.832774e-58 | 2.827804e-55 |
| MsG0280006769.01 | MsG0480018513.01 | 0.815071 | 1.115576e-51 | 7.614085e-49 |
| MsG0280006769.01 | MsG0480018603.01 | 0.817849 | 2.663599e-52 | 1.961805e-49 |
| MsG0280006769.01 | MsG0480018627.01 | 0.804335 | 2.270093e-49 | 1.167353e-46 |
| MsG0280006769.01 | MsG0480018883.01 | 0.818998 | 1.462884e-52 | 1.112209e-49 |
| MsG0280006769.01 | MsG0480018985.01 | 0.803532 | 3.332382e-49 | 1.678750e-46 |
| MsG0280006769.01 | MsG0480019795.01 | 0.827104 | 1.880661e-54 | 1.797923e-51 |
| MsG0280006769.01 | MsG0480020887.01 | 0.806855 | 6.717330e-50 | 3.685271e-47 |
| MsG0280006769.01 | MsG0480021558.01 | 0.824568 | 7.524475e-54 | 6.690258e-51 |
| MsG0280006769.01 | MsG0480021784.01 | 0.800389 | 1.474940e-48 | 6.859162e-46 |
| MsG0280006769.01 | MsG0480021869.01 | 0.844102 | 9.306753e-59 | 1.486852e-55 |
| MsG0280006769.01 | MsG0480021917.01 | 0.809189 | 2.139464e-50 | 1.247875e-47 |
| MsG0280006769.01 | MsG0480021925.01 | 0.826791 | 2.235028e-54 | 2.117214e-51 |
| MsG0280006769.01 | MsG0480021927.01 | 0.810064 | 1.387617e-50 | 8.283017e-48 |
| MsG0280006769.01 | MsG0480022068.01 | 0.832350 | 9.941180e-56 | 1.108170e-52 |
| MsG0280006769.01 | MsG0480022855.01 | 0.811432 | 7.023406e-51 | 4.346876e-48 |
| MsG0280006769.01 | MsG0480023045.01 | 0.812520 | 4.068804e-51 | 2.592650e-48 |
| MsG0280006769.01 | MsG0480023251.01 | 0.834447 | 2.981834e-56 | 3.539718e-53 |
| MsG0280006769.01 | MsG0480023488.01 | 0.837543 | 4.886553e-57 | 6.367914e-54 |
| MsG0280006769.01 | MsG0480023489.01 | 0.829744 | 4.337648e-55 | 4.479898e-52 |
| MsG0280006769.01 | MsG0480023636.01 | 0.818869 | 1.565173e-52 | 1.185644e-49 |
| MsG0280006769.01 | MsG0580024038.01 | 0.808467 | 3.053517e-50 | 1.747283e-47 |
| MsG0280006769.01 | MsG0580024363.01 | -0.802576 | 5.253543e-49 | 2.582465e-46 |
| MsG0280006769.01 | MsG0580024552.01 | 0.801787 | 7.637101e-49 | 3.679477e-46 |
| MsG0280006769.01 | MsG0580025008.01 | 0.800702 | 1.273064e-48 | 5.967328e-46 |
| MsG0280006769.01 | MsG0580025022.01 | 0.800400 | 1.467143e-48 | 6.824839e-46 |
| MsG0280006769.01 | MsG0580025832.01 | 0.831539 | 1.576428e-55 | 1.715998e-52 |
| MsG0280006769.01 | MsG0580025899.01 | 0.804419 | 2.180022e-49 | 1.123429e-46 |
| MsG0280006769.01 | MsG0580025987.01 | 0.805837 | 1.100558e-49 | 5.882775e-47 |
| MsG0280006769.01 | MsG0580026131.01 | 0.826884 | 2.123586e-54 | 2.017150e-51 |
| MsG0280006769.01 | MsG0580027211.01 | 0.808069 | 3.711682e-50 | 2.101711e-47 |
| MsG0280006769.01 | MsG0580027401.01 | 0.803485 | 3.409142e-49 | 1.715268e-46 |
| MsG0280006769.01 | MsG0580028907.01 | 0.809026 | 2.318845e-50 | 1.346525e-47 |
| MsG0280006769.01 | MsG0580029737.01 | 0.819555 | 1.092131e-52 | 8.431799e-50 |
| MsG0280006769.01 | MsG0680030880.01 | 0.821936 | 3.096453e-53 | 2.554801e-50 |
| MsG0280006769.01 | MsG0680031108.01 | 0.803507 | 3.372913e-49 | 1.698036e-46 |
| MsG0280006769.01 | MsG0680031617.01 | 0.801741 | 7.804183e-49 | 3.755480e-46 |
| MsG0280006769.01 | MsG0680032058.01 | 0.829218 | 5.822381e-55 | 5.921137e-52 |
| MsG0280006769.01 | MsG0680033928.01 | 0.810130 | 1.343283e-50 | 8.031837e-48 |
| MsG0280006769.01 | MsG0680034230.01 | 0.808956 | 2.400094e-50 | 1.391096e-47 |
| MsG0280006769.01 | MsG0680034565.01 | 0.800428 | 1.448247e-48 | 6.741863e-46 |
| MsG0280006769.01 | MsG0680035005.01 | 0.803015 | 4.265423e-49 | 2.120173e-46 |
| MsG0280006769.01 | MsG0680035580.01 | 0.819830 | 9.449055e-53 | 7.351485e-50 |
| MsG0280006769.01 | MsG0680035844.01 | 0.817575 | 3.070997e-52 | 2.244808e-49 |
| MsG0280006769.01 | MsG0780036201.01 | 0.802377 | 5.775912e-49 | 2.825068e-46 |
| MsG0280006769.01 | MsG0780037054.01 | 0.826910 | 2.093035e-54 | 1.989795e-51 |
| MsG0280006769.01 | MsG0780038491.01 | 0.805343 | 1.397582e-49 | 7.375824e-47 |
| MsG0280006769.01 | MsG0780038691.01 | 0.805473 | 1.312660e-49 | 6.950764e-47 |
| MsG0280006769.01 | MsG0780038828.01 | 0.813622 | 2.332039e-51 | 1.530558e-48 |
| MsG0280006769.01 | MsG0780039170.01 | 0.806782 | 6.960414e-50 | 3.811266e-47 |
| MsG0280006769.01 | MsG0780039243.01 | 0.821673 | 3.562139e-53 | 2.917252e-50 |
| MsG0280006769.01 | MsG0780039252.01 | 0.823632 | 1.247703e-53 | 1.080266e-50 |
| MsG0280006769.01 | MsG0780039443.01 | 0.805790 | 1.126087e-49 | 6.011915e-47 |
| MsG0280006769.01 | MsG0780039867.01 | -0.814985 | 1.165842e-51 | 7.938869e-49 |
| MsG0280006769.01 | MsG0780040576.01 | -0.836499 | 9.031339e-57 | 1.140167e-53 |
| MsG0280006769.01 | MsG0780040596.01 | 0.803124 | 4.048762e-49 | 2.018174e-46 |
| MsG0280006769.01 | MsG0780040669.01 | 0.802702 | 4.948469e-49 | 2.440416e-46 |
| MsG0280006769.01 | MsG0780041229.01 | 0.804919 | 1.714356e-49 | 8.950431e-47 |
| MsG0280006769.01 | MsG0780041456.01 | 0.805338 | 1.400655e-49 | 7.391106e-47 |
| MsG0280006769.01 | MsG0780041475.01 | 0.806222 | 9.135780e-50 | 4.931593e-47 |
| MsG0280006769.01 | MsG0880041836.01 | 0.807912 | 4.009122e-50 | 2.260631e-47 |
| MsG0280006769.01 | MsG0880042031.01 | 0.816449 | 5.498631e-52 | 3.897115e-49 |
| MsG0280006769.01 | MsG0880042161.01 | 0.832112 | 1.138372e-55 | 1.260070e-52 |
| MsG0280006769.01 | MsG0880042520.01 | 0.805812 | 1.114218e-49 | 5.951821e-47 |
| MsG0280006769.01 | MsG0880042698.01 | 0.837531 | 4.919618e-57 | 6.409147e-54 |
| MsG0280006769.01 | MsG0880043157.01 | 0.831948 | 1.249519e-55 | 1.376685e-52 |
| MsG0280006769.01 | MsG0880043634.01 | 0.827296 | 1.692270e-54 | 1.627030e-51 |
| MsG0280006769.01 | MsG0880043941.01 | 0.827295 | 1.693139e-54 | 1.627822e-51 |
| MsG0280006769.01 | MsG0880044210.01 | 0.806495 | 8.002080e-50 | 4.349605e-47 |
| MsG0280006769.01 | MsG0880044573.01 | 0.811052 | 8.489370e-51 | 5.201888e-48 |
| MsG0280006769.01 | MsG0880045111.01 | 0.812822 | 3.493916e-51 | 2.243885e-48 |
| MsG0280006769.01 | MsG0880045371.01 | 0.806221 | 9.138308e-50 | 4.932879e-47 |
| MsG0280006769.01 | MsG0880045926.01 | 0.810153 | 1.328028e-50 | 7.945437e-48 |
| MsG0280006769.01 | MsG0880046809.01 | 0.801666 | 8.086056e-49 | 3.883811e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006769.01.T01 | MTR_2g014480 | 97.654 | 341 | 8 | 0 | 1 | 341 | 1 | 341 | 0.0 | 692 |
| MsG0280006769.01.T01 | MTR_2g014470 | 66.959 | 342 | 94 | 5 | 1 | 336 | 1 | 329 | 3.47e-150 | 426 |
| MsG0280006769.01.T01 | MTR_4g078850 | 62.356 | 348 | 111 | 4 | 1 | 339 | 1 | 337 | 1.85e-145 | 414 |
| MsG0280006769.01.T01 | MTR_4g015840 | 59.767 | 343 | 123 | 4 | 1 | 339 | 1 | 332 | 3.61e-136 | 390 |
| MsG0280006769.01.T01 | MTR_2g090705 | 59.302 | 344 | 119 | 4 | 1 | 339 | 1 | 328 | 4.29e-132 | 380 |
| MsG0280006769.01.T01 | MTR_3g108020 | 52.071 | 338 | 138 | 7 | 1 | 336 | 1 | 316 | 2.90e-109 | 322 |
| MsG0280006769.01.T01 | MTR_4g015840 | 57.895 | 247 | 89 | 4 | 97 | 339 | 20 | 255 | 7.36e-87 | 262 |
| MsG0280006769.01.T01 | MTR_5g037880 | 50.000 | 168 | 81 | 1 | 169 | 336 | 101 | 265 | 1.82e-54 | 180 |
| MsG0280006769.01.T01 | MTR_5g037880 | 53.012 | 83 | 30 | 2 | 4 | 77 | 5 | 87 | 2.82e-18 | 84.0 |
| MsG0280006769.01.T01 | MTR_3g437840 | 46.497 | 157 | 81 | 1 | 183 | 339 | 2 | 155 | 1.35e-43 | 148 |
| MsG0280006769.01.T01 | MTR_8g006430 | 32.102 | 352 | 196 | 11 | 5 | 332 | 15 | 347 | 1.52e-41 | 150 |
| MsG0280006769.01.T01 | MTR_3g088140 | 43.023 | 172 | 94 | 2 | 163 | 333 | 173 | 341 | 2.13e-40 | 145 |
| MsG0280006769.01.T01 | MTR_2g006890 | 44.571 | 175 | 93 | 2 | 163 | 336 | 195 | 366 | 5.23e-40 | 145 |
| MsG0280006769.01.T01 | MTR_7g109340 | 30.523 | 344 | 199 | 8 | 5 | 340 | 27 | 338 | 8.41e-36 | 133 |
| MsG0280006769.01.T01 | MTR_3g437850 | 33.649 | 211 | 82 | 5 | 3 | 199 | 1 | 167 | 8.66e-27 | 104 |
| MsG0280006769.01.T01 | MTR_3g087030 | 26.816 | 358 | 215 | 13 | 4 | 336 | 82 | 417 | 5.18e-24 | 102 |
| MsG0280006769.01.T01 | MTR_5g065160 | 28.412 | 359 | 200 | 15 | 4 | 334 | 83 | 412 | 9.93e-21 | 92.8 |
| MsG0280006769.01.T01 | MTR_2g087660 | 28.111 | 217 | 124 | 5 | 120 | 333 | 159 | 346 | 1.09e-20 | 92.8 |
| MsG0280006769.01.T01 | MTR_2g087660 | 61.972 | 71 | 22 | 1 | 5 | 75 | 14 | 79 | 2.25e-13 | 70.9 |
| MsG0280006769.01.T01 | MTR_5g065160 | 28.412 | 359 | 200 | 15 | 4 | 334 | 82 | 411 | 1.11e-20 | 92.8 |
| MsG0280006769.01.T01 | MTR_5g065160 | 28.571 | 357 | 202 | 15 | 4 | 334 | 83 | 412 | 1.44e-20 | 92.8 |
| MsG0280006769.01.T01 | MTR_5g065160 | 28.969 | 359 | 198 | 16 | 4 | 334 | 76 | 405 | 2.16e-20 | 92.0 |
| MsG0280006769.01.T01 | MTR_4g050420 | 27.854 | 219 | 122 | 6 | 120 | 333 | 157 | 344 | 2.50e-20 | 91.7 |
| MsG0280006769.01.T01 | MTR_4g050420 | 60.563 | 71 | 23 | 1 | 5 | 75 | 14 | 79 | 4.32e-12 | 67.0 |
| MsG0280006769.01.T01 | MTR_7g101070 | 60.000 | 65 | 26 | 0 | 4 | 68 | 358 | 422 | 1.53e-19 | 89.7 |
| MsG0280006769.01.T01 | MTR_3g437360 | 52.000 | 75 | 36 | 0 | 3 | 77 | 4 | 78 | 2.71e-18 | 84.7 |
| MsG0280006769.01.T01 | MTR_2g104030 | 56.000 | 75 | 31 | 1 | 4 | 78 | 70 | 142 | 1.43e-17 | 84.0 |
| MsG0280006769.01.T01 | MTR_5g065860 | 34.074 | 135 | 53 | 4 | 4 | 138 | 48 | 146 | 2.68e-16 | 75.5 |
| MsG0280006769.01.T01 | MTR_5g012530 | 46.753 | 77 | 39 | 1 | 4 | 78 | 12 | 88 | 6.44e-16 | 79.0 |
| MsG0280006769.01.T01 | MTR_8g022310 | 45.122 | 82 | 38 | 2 | 4 | 78 | 10 | 91 | 1.65e-15 | 74.7 |
| MsG0280006769.01.T01 | MTR_8g022310 | 45.122 | 82 | 38 | 2 | 4 | 78 | 10 | 91 | 2.04e-15 | 74.3 |
| MsG0280006769.01.T01 | MTR_7g112360 | 48.485 | 66 | 31 | 1 | 5 | 67 | 17 | 82 | 2.56e-15 | 73.2 |
| MsG0280006769.01.T01 | MTR_8g022310 | 45.122 | 82 | 38 | 2 | 4 | 78 | 10 | 91 | 2.70e-15 | 73.9 |
| MsG0280006769.01.T01 | MTR_7g112360 | 48.485 | 66 | 31 | 1 | 5 | 67 | 17 | 82 | 2.87e-15 | 71.6 |
| MsG0280006769.01.T01 | MTR_8g022310 | 45.122 | 82 | 38 | 2 | 4 | 78 | 10 | 91 | 3.17e-15 | 74.3 |
| MsG0280006769.01.T01 | MTR_3g027580 | 48.684 | 76 | 38 | 1 | 1 | 76 | 86 | 160 | 6.22e-15 | 75.9 |
| MsG0280006769.01.T01 | MTR_1g029460 | 48.611 | 72 | 36 | 1 | 3 | 74 | 5 | 75 | 7.59e-15 | 75.5 |
| MsG0280006769.01.T01 | MTR_4g023470 | 24.309 | 362 | 214 | 9 | 1 | 333 | 83 | 413 | 1.80e-14 | 74.3 |
| MsG0280006769.01.T01 | MTR_1g110310 | 50.704 | 71 | 34 | 1 | 4 | 74 | 16 | 85 | 1.91e-14 | 74.3 |
| MsG0280006769.01.T01 | MTR_6g027110 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 3.44e-14 | 69.3 |
| MsG0280006769.01.T01 | MTR_4g085070 | 51.667 | 60 | 26 | 1 | 11 | 67 | 19 | 78 | 4.15e-14 | 69.3 |
| MsG0280006769.01.T01 | MTR_2g087660 | 61.972 | 71 | 22 | 1 | 5 | 75 | 14 | 79 | 1.63e-13 | 70.9 |
| MsG0280006769.01.T01 | MTR_2g087660 | 27.684 | 177 | 98 | 4 | 120 | 295 | 159 | 306 | 4.73e-13 | 69.3 |
| MsG0280006769.01.T01 | MTR_7g069480 | 49.275 | 69 | 33 | 1 | 3 | 71 | 26 | 92 | 2.60e-13 | 71.2 |
| MsG0280006769.01.T01 | MTR_6g027030 | 44.928 | 69 | 34 | 1 | 3 | 67 | 1 | 69 | 3.06e-13 | 68.6 |
| MsG0280006769.01.T01 | MTR_3g100330 | 49.254 | 67 | 31 | 2 | 3 | 68 | 68 | 132 | 3.88e-13 | 68.6 |
| MsG0280006769.01.T01 | MTR_1g029470 | 47.887 | 71 | 36 | 1 | 4 | 74 | 6 | 75 | 5.03e-13 | 69.7 |
| MsG0280006769.01.T01 | MTR_5g035770 | 52.239 | 67 | 31 | 1 | 4 | 70 | 25 | 90 | 5.66e-13 | 69.7 |
| MsG0280006769.01.T01 | MTR_5g004570 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 2.78e-12 | 66.2 |
| MsG0280006769.01.T01 | MTR_1g052110 | 47.692 | 65 | 33 | 1 | 6 | 70 | 40 | 103 | 3.10e-12 | 66.6 |
| MsG0280006769.01.T01 | MTR_7g092380 | 29.834 | 181 | 111 | 7 | 6 | 176 | 24 | 198 | 3.13e-12 | 66.6 |
| MsG0280006769.01.T01 | MTR_6g026940 | 42.029 | 69 | 36 | 1 | 3 | 67 | 1 | 69 | 3.53e-12 | 64.7 |
| MsG0280006769.01.T01 | MTR_6g471050 | 40.299 | 134 | 51 | 7 | 30 | 157 | 7 | 117 | 3.66e-12 | 67.4 |
| MsG0280006769.01.T01 | MTR_2g436560 | 34.646 | 127 | 62 | 4 | 4 | 120 | 104 | 219 | 2.92e-11 | 64.3 |
| MsG0280006769.01.T01 | MTR_6g059870 | 42.169 | 83 | 46 | 1 | 3 | 85 | 65 | 145 | 4.77e-11 | 64.3 |
| MsG0280006769.01.T01 | MTR_2g435450 | 49.231 | 65 | 31 | 1 | 3 | 67 | 38 | 100 | 6.38e-11 | 62.4 |
| MsG0280006769.01.T01 | MTR_8g037810 | 46.250 | 80 | 39 | 3 | 5 | 81 | 7 | 85 | 9.90e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006769.01.T01 | AT2G20560 | 60.345 | 348 | 111 | 4 | 1 | 339 | 1 | 330 | 1.89e-142 | 406 |
| MsG0280006769.01.T01 | AT3G08910 | 60.472 | 339 | 109 | 5 | 1 | 339 | 1 | 314 | 3.54e-136 | 390 |
| MsG0280006769.01.T01 | AT4G28480 | 60.057 | 353 | 115 | 6 | 1 | 339 | 1 | 341 | 4.01e-134 | 386 |
| MsG0280006769.01.T01 | AT5G01390 | 58.382 | 346 | 118 | 6 | 1 | 339 | 1 | 327 | 1.63e-132 | 381 |
| MsG0280006769.01.T01 | AT5G25530 | 53.779 | 344 | 141 | 7 | 1 | 339 | 1 | 331 | 8.14e-120 | 349 |
| MsG0280006769.01.T01 | AT5G25530 | 52.557 | 352 | 141 | 8 | 1 | 339 | 1 | 339 | 8.88e-117 | 342 |
| MsG0280006769.01.T01 | AT1G10350 | 49.853 | 341 | 162 | 5 | 1 | 336 | 1 | 337 | 1.02e-107 | 318 |
| MsG0280006769.01.T01 | AT4G28480 | 52.339 | 342 | 101 | 7 | 1 | 339 | 1 | 283 | 1.96e-104 | 308 |
| MsG0280006769.01.T01 | AT1G59725 | 49.709 | 344 | 146 | 5 | 1 | 339 | 1 | 322 | 1.10e-102 | 305 |
| MsG0280006769.01.T01 | AT3G47940 | 47.383 | 363 | 138 | 8 | 1 | 336 | 1 | 337 | 3.93e-100 | 299 |
| MsG0280006769.01.T01 | AT5G01390 | 47.493 | 339 | 108 | 5 | 1 | 339 | 1 | 269 | 7.17e-91 | 273 |
| MsG0280006769.01.T01 | AT2G20550 | 49.466 | 281 | 95 | 4 | 100 | 339 | 3 | 277 | 1.13e-76 | 237 |
| MsG0280006769.01.T01 | AT2G20550 | 49.466 | 281 | 95 | 4 | 100 | 339 | 3 | 277 | 1.13e-76 | 237 |
| MsG0280006769.01.T01 | AT5G01390 | 54.028 | 211 | 74 | 5 | 1 | 204 | 1 | 195 | 1.71e-65 | 207 |
| MsG0280006769.01.T01 | AT5G01390 | 65.574 | 122 | 41 | 1 | 1 | 122 | 1 | 121 | 3.27e-47 | 160 |
| MsG0280006769.01.T01 | AT5G01390 | 45.714 | 140 | 34 | 2 | 200 | 339 | 133 | 230 | 2.36e-28 | 110 |
| MsG0280006769.01.T01 | AT1G44160 | 38.462 | 208 | 118 | 2 | 133 | 340 | 151 | 348 | 2.21e-37 | 137 |
| MsG0280006769.01.T01 | AT1G11040 | 39.153 | 189 | 107 | 2 | 151 | 339 | 246 | 426 | 5.55e-37 | 138 |
| MsG0280006769.01.T01 | AT3G44110 | 30.328 | 366 | 184 | 8 | 5 | 333 | 15 | 346 | 2.04e-36 | 136 |
| MsG0280006769.01.T01 | AT5G22060 | 32.162 | 370 | 173 | 11 | 5 | 333 | 15 | 347 | 7.99e-36 | 134 |
| MsG0280006769.01.T01 | AT3G44110 | 30.172 | 348 | 172 | 8 | 5 | 315 | 15 | 328 | 6.15e-32 | 122 |
| MsG0280006769.01.T01 | AT3G62600 | 29.651 | 344 | 196 | 10 | 2 | 333 | 24 | 333 | 3.25e-31 | 120 |
| MsG0280006769.01.T01 | AT2G22360 | 26.836 | 354 | 219 | 11 | 4 | 336 | 86 | 420 | 4.40e-23 | 99.8 |
| MsG0280006769.01.T01 | AT4G39960 | 54.651 | 86 | 36 | 2 | 4 | 88 | 85 | 168 | 1.15e-20 | 92.8 |
| MsG0280006769.01.T01 | AT4G39960 | 54.651 | 86 | 36 | 2 | 4 | 88 | 85 | 168 | 1.15e-20 | 92.8 |
| MsG0280006769.01.T01 | AT1G80030 | 54.118 | 85 | 34 | 2 | 4 | 88 | 75 | 154 | 2.21e-19 | 89.4 |
| MsG0280006769.01.T01 | AT1G80030 | 54.118 | 85 | 34 | 2 | 4 | 88 | 75 | 154 | 3.02e-19 | 89.0 |
| MsG0280006769.01.T01 | AT1G80030 | 54.118 | 85 | 34 | 2 | 4 | 88 | 75 | 154 | 3.02e-19 | 89.0 |
| MsG0280006769.01.T01 | AT1G80030 | 54.118 | 85 | 34 | 2 | 4 | 88 | 75 | 154 | 3.02e-19 | 89.0 |
| MsG0280006769.01.T01 | AT3G17830 | 51.087 | 92 | 36 | 3 | 2 | 88 | 61 | 148 | 7.09e-18 | 85.1 |
| MsG0280006769.01.T01 | AT2G41000 | 43.333 | 90 | 45 | 2 | 3 | 88 | 2 | 89 | 9.99e-17 | 78.2 |
| MsG0280006769.01.T01 | AT2G41000 | 43.333 | 90 | 45 | 2 | 3 | 88 | 2 | 89 | 1.50e-16 | 77.0 |
| MsG0280006769.01.T01 | AT5G48030 | 52.778 | 72 | 33 | 1 | 4 | 75 | 94 | 164 | 2.25e-16 | 80.1 |
| MsG0280006769.01.T01 | AT1G59980 | 50.725 | 69 | 33 | 1 | 6 | 74 | 25 | 92 | 6.23e-16 | 78.2 |
| MsG0280006769.01.T01 | AT1G59980 | 50.725 | 69 | 33 | 1 | 6 | 74 | 25 | 92 | 1.06e-15 | 78.2 |
| MsG0280006769.01.T01 | AT5G03160 | 52.308 | 65 | 31 | 0 | 4 | 68 | 370 | 434 | 1.34e-15 | 78.2 |
| MsG0280006769.01.T01 | AT1G68370 | 53.521 | 71 | 32 | 1 | 4 | 74 | 17 | 86 | 2.35e-15 | 77.0 |
| MsG0280006769.01.T01 | AT5G16650 | 55.224 | 67 | 29 | 1 | 4 | 70 | 11 | 76 | 5.03e-15 | 72.4 |
| MsG0280006769.01.T01 | AT5G16650 | 56.250 | 64 | 27 | 1 | 4 | 67 | 11 | 73 | 5.95e-15 | 71.2 |
| MsG0280006769.01.T01 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 7.24e-15 | 70.5 |
| MsG0280006769.01.T01 | AT1G56300 | 50.000 | 66 | 30 | 1 | 5 | 67 | 14 | 79 | 7.54e-15 | 71.6 |
| MsG0280006769.01.T01 | AT2G21510 | 50.685 | 73 | 35 | 1 | 4 | 76 | 6 | 77 | 2.26e-14 | 73.6 |
| MsG0280006769.01.T01 | AT2G21510 | 50.685 | 73 | 35 | 1 | 4 | 76 | 6 | 77 | 2.26e-14 | 73.6 |
| MsG0280006769.01.T01 | AT2G21510 | 50.685 | 73 | 35 | 1 | 4 | 76 | 6 | 77 | 2.46e-14 | 73.6 |
| MsG0280006769.01.T01 | AT2G21510 | 50.685 | 73 | 35 | 1 | 4 | 76 | 6 | 77 | 2.46e-14 | 73.6 |
| MsG0280006769.01.T01 | AT2G21510 | 50.685 | 73 | 35 | 1 | 4 | 76 | 6 | 77 | 3.43e-14 | 72.8 |
| MsG0280006769.01.T01 | AT2G35720 | 45.455 | 77 | 40 | 1 | 4 | 78 | 15 | 91 | 5.51e-14 | 73.2 |
| MsG0280006769.01.T01 | AT5G06910 | 50.769 | 65 | 31 | 1 | 6 | 70 | 31 | 94 | 1.16e-13 | 70.9 |
| MsG0280006769.01.T01 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 1.51e-13 | 67.0 |
| MsG0280006769.01.T01 | AT2G33735 | 46.154 | 65 | 34 | 1 | 4 | 68 | 22 | 85 | 1.51e-13 | 67.0 |
| MsG0280006769.01.T01 | AT1G24120 | 49.254 | 67 | 33 | 1 | 4 | 70 | 20 | 85 | 2.02e-12 | 68.2 |
| MsG0280006769.01.T01 | AT1G71000 | 46.970 | 66 | 32 | 1 | 5 | 67 | 9 | 74 | 2.05e-12 | 65.1 |
| MsG0280006769.01.T01 | AT4G13830 | 43.284 | 67 | 37 | 1 | 3 | 68 | 65 | 131 | 2.60e-12 | 64.3 |
| MsG0280006769.01.T01 | AT3G08970 | 47.826 | 69 | 34 | 1 | 3 | 71 | 26 | 92 | 3.03e-12 | 67.8 |
| MsG0280006769.01.T01 | AT3G08970 | 47.826 | 69 | 34 | 1 | 3 | 71 | 26 | 92 | 3.03e-12 | 67.8 |
| MsG0280006769.01.T01 | AT4G13830 | 43.284 | 67 | 37 | 1 | 3 | 68 | 65 | 131 | 3.16e-12 | 65.1 |
| MsG0280006769.01.T01 | AT4G39150 | 45.205 | 73 | 39 | 1 | 4 | 76 | 6 | 77 | 3.25e-12 | 67.0 |
| MsG0280006769.01.T01 | AT4G39150 | 45.205 | 73 | 39 | 1 | 4 | 76 | 6 | 77 | 3.25e-12 | 67.0 |
| MsG0280006769.01.T01 | AT4G39150 | 45.205 | 73 | 39 | 1 | 4 | 76 | 6 | 77 | 3.25e-12 | 67.0 |
| MsG0280006769.01.T01 | AT3G12170 | 47.692 | 65 | 33 | 1 | 6 | 70 | 13 | 76 | 4.11e-12 | 65.9 |
| MsG0280006769.01.T01 | AT1G71000 | 46.970 | 66 | 32 | 1 | 5 | 67 | 9 | 74 | 4.66e-12 | 63.9 |
| MsG0280006769.01.T01 | AT3G12170 | 47.692 | 65 | 33 | 1 | 6 | 70 | 49 | 112 | 7.00e-12 | 65.9 |
| MsG0280006769.01.T01 | AT3G06340 | 37.615 | 109 | 63 | 2 | 3 | 111 | 66 | 169 | 9.15e-12 | 66.6 |
| MsG0280006769.01.T01 | AT3G06340 | 37.615 | 109 | 63 | 2 | 3 | 111 | 66 | 169 | 9.15e-12 | 66.6 |
| MsG0280006769.01.T01 | AT3G06340 | 37.615 | 109 | 63 | 2 | 3 | 111 | 66 | 169 | 9.15e-12 | 66.6 |
| MsG0280006769.01.T01 | AT3G06340 | 37.615 | 109 | 63 | 2 | 3 | 111 | 66 | 169 | 9.15e-12 | 66.6 |
| MsG0280006769.01.T01 | AT4G13830 | 43.284 | 67 | 37 | 1 | 3 | 68 | 65 | 131 | 1.39e-11 | 63.5 |
| MsG0280006769.01.T01 | AT5G49060 | 49.254 | 67 | 32 | 1 | 4 | 70 | 99 | 163 | 2.30e-11 | 64.7 |
| MsG0280006769.01.T01 | AT5G49060 | 49.254 | 67 | 32 | 1 | 4 | 70 | 99 | 163 | 2.30e-11 | 64.7 |
| MsG0280006769.01.T01 | AT1G21080 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 2.89e-11 | 64.7 |
| MsG0280006769.01.T01 | AT1G21080 | 45.070 | 71 | 38 | 1 | 4 | 74 | 6 | 75 | 2.95e-11 | 64.7 |
| MsG0280006769.01.T01 | AT4G19570 | 50.000 | 70 | 33 | 1 | 4 | 73 | 66 | 133 | 3.15e-11 | 64.7 |
| MsG0280006769.01.T01 | AT3G14200 | 45.312 | 64 | 33 | 1 | 6 | 67 | 14 | 77 | 4.99e-11 | 62.4 |
| MsG0280006769.01.T01 | AT1G76700 | 46.479 | 71 | 37 | 1 | 4 | 74 | 6 | 75 | 8.55e-11 | 63.2 |
Find 95 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATTACTATGAGATTT+TGG | 0.205034 | 2:+6001968 | MsG0280006769.01.T01:CDS |
| GGTTGCTCATTTCCTTTCTC+TGG | 0.210750 | 2:-6003663 | None:intergenic |
| CCATGAACATTTCTTAGTTC+TGG | 0.280207 | 2:-6004007 | None:intergenic |
| ACCTTCTGCCATCCTGAGTT+TGG | 0.289236 | 2:-6002931 | None:intergenic |
| AAATATGCCATCTGCACTTC+TGG | 0.292239 | 2:-6002966 | None:intergenic |
| AATCCAACCAGGCTGGAAAA+AGG | 0.300367 | 2:+6003623 | MsG0280006769.01.T01:CDS |
| CATAGACCAAAGTCATAAAA+TGG | 0.303972 | 2:-6004121 | None:intergenic |
| CCATCCTGAGTTTGGAAGTA+TGG | 0.308740 | 2:-6002923 | None:intergenic |
| CTTGTCAGGGTGCCATTTCA+TGG | 0.323618 | 2:-6002045 | None:intergenic |
| CTTCACAGAGGGGTAATCTT+AGG | 0.330562 | 2:+6003934 | MsG0280006769.01.T01:CDS |
| TGGATCAATTCCATTGTCTA+TGG | 0.331007 | 2:-6003862 | None:intergenic |
| AGAGCAATTTATGATCAATA+TGG | 0.332277 | 2:+6002851 | MsG0280006769.01.T01:CDS |
| TCGTGGGTGTCCAGGTCTTT+TGG | 0.336631 | 2:+6003073 | MsG0280006769.01.T01:CDS |
| TACAAGACAAGGTAATGATT+TGG | 0.349376 | 2:+6003743 | MsG0280006769.01.T01:CDS |
| CTCAGGATGGCAGAAGGTTT+AGG | 0.363586 | 2:+6002936 | MsG0280006769.01.T01:CDS |
| CACCTTCCAACTTACTACTT+TGG | 0.365824 | 2:+6003818 | MsG0280006769.01.T01:CDS |
| CTCATTCCCATTCCTCCATA+AGG | 0.366245 | 2:-6003013 | None:intergenic |
| TTATTGTCAGGATTCTTGTC+AGG | 0.367944 | 2:-6002059 | None:intergenic |
| AAGAAAAGAGAGTTAATAAC+AGG | 0.370399 | 2:-6004098 | None:intergenic |
| AGCCTTGAGGAACTTTATAA+AGG | 0.373517 | 2:+6003190 | MsG0280006769.01.T01:CDS |
| GGGCGGCGGCTGCAGAGGCA+TGG | 0.376556 | 2:+6003036 | MsG0280006769.01.T01:CDS |
| AATCCTTCAAGTAATATTGT+TGG | 0.401796 | 2:-6004181 | None:intergenic |
| ATAGAAAACTTGCCATGAAA+TGG | 0.412382 | 2:+6002033 | MsG0280006769.01.T01:CDS |
| GTTGCTCATTTCCTTTCTCT+GGG | 0.417866 | 2:-6003662 | None:intergenic |
| GGCGGCGGCTGCAGAGGCAT+GGG | 0.419490 | 2:+6003037 | MsG0280006769.01.T01:CDS |
| TCAAGCCCTTATGGAGGAAT+GGG | 0.422615 | 2:+6003007 | MsG0280006769.01.T01:CDS |
| TCATTCCCATTCCTCCATAA+GGG | 0.426221 | 2:-6003012 | None:intergenic |
| GCCGGCAACCACTTCTTCAT+AGG | 0.427823 | 2:-6003886 | None:intergenic |
| TCAGCATCATTCTTATTGTC+AGG | 0.435149 | 2:-6002071 | None:intergenic |
| ATATCTGCAGCAATGACATT+TGG | 0.437256 | 2:-6003684 | None:intergenic |
| ATGGGAGGTGCCTTGCGTCT+TGG | 0.439334 | 2:-6003148 | None:intergenic |
| ACCTATGAAGAAGTGGTTGC+CGG | 0.441137 | 2:+6003885 | MsG0280006769.01.T01:CDS |
| CCAGAACTAAGAAATGTTCA+TGG | 0.442643 | 2:+6004007 | MsG0280006769.01.T01:exon |
| GGAATGGGAATGAGGGGCGG+CGG | 0.451910 | 2:+6003022 | MsG0280006769.01.T01:CDS |
| TTCCAACTTACTACTTTGGA+TGG | 0.453959 | 2:+6003822 | MsG0280006769.01.T01:CDS |
| GGACTTTATTTATGACACTA+AGG | 0.455078 | 2:-6004160 | None:intergenic |
| ATGAGGGGCGGCGGCTGCAG+AGG | 0.461247 | 2:+6003031 | MsG0280006769.01.T01:CDS |
| GTTTCAGCATCAACCGTGCT+AGG | 0.461527 | 2:-6003978 | None:intergenic |
| AATATGCCATCTGCACTTCT+GGG | 0.462504 | 2:-6002965 | None:intergenic |
| CTTATGGAGGAATGGGAATG+AGG | 0.472062 | 2:+6003014 | MsG0280006769.01.T01:CDS |
| AAAGTAGTGGAAGATGGGTT+TGG | 0.472595 | 2:+6001950 | MsG0280006769.01.T01:exon |
| TTCAAGCCCTTATGGAGGAA+TGG | 0.472986 | 2:+6003006 | MsG0280006769.01.T01:CDS |
| GACAGCAAAGTAGTGGAAGA+TGG | 0.481901 | 2:+6001944 | MsG0280006769.01.T01:exon |
| ACTCATATCTGAAGCATATG+AGG | 0.486449 | 2:+6002106 | MsG0280006769.01.T01:CDS |
| GGAAATTGGCATCCCTTCGC+CGG | 0.486902 | 2:-6003904 | None:intergenic |
| AAAATCACTTTCCCAGAGAA+AGG | 0.488986 | 2:+6003651 | MsG0280006769.01.T01:CDS |
| AACTTACTACTTTGGATGGA+AGG | 0.491000 | 2:+6003826 | MsG0280006769.01.T01:CDS |
| AGTCCAACAATATTACTTGA+AGG | 0.491847 | 2:+6004178 | MsG0280006769.01.T01:three_prime_UTR |
| GAGGTCAGTCGTGGGTGTCC+AGG | 0.495164 | 2:+6003065 | MsG0280006769.01.T01:CDS |
| TATTGTCAGGATTCTTGTCA+GGG | 0.495700 | 2:-6002058 | None:intergenic |
| ATTGTTAGTATTTCCTCCAC+AGG | 0.497108 | 2:-6003597 | None:intergenic |
| TTCCATCCAAAGTAGTAAGT+TGG | 0.497925 | 2:-6003824 | None:intergenic |
| GCAACCACTTCTTCATAGGT+TGG | 0.518940 | 2:-6003882 | None:intergenic |
| ACACAAGATGCACTTGGTAA+TGG | 0.523093 | 2:-6004049 | None:intergenic |
| TGGAAGGTGTAGCTTCTGCT+TGG | 0.525664 | 2:-6003804 | None:intergenic |
| AAGAAGTGGTTGCCGGCGAA+GGG | 0.526680 | 2:+6003892 | MsG0280006769.01.T01:CDS |
| GGAGGAATGGGAATGAGGGG+CGG | 0.532345 | 2:+6003019 | MsG0280006769.01.T01:CDS |
| GGGAAATTGCATATGCAAGC+GGG | 0.532622 | 2:+6003239 | MsG0280006769.01.T01:CDS |
| TGGGCATGAGAGGTCAGTCG+TGG | 0.533992 | 2:+6003056 | MsG0280006769.01.T01:CDS |
| TTATGGAGGAATGGGAATGA+GGG | 0.534716 | 2:+6003015 | MsG0280006769.01.T01:CDS |
| GAAGAAGTGGTTGCCGGCGA+AGG | 0.534745 | 2:+6003891 | MsG0280006769.01.T01:CDS |
| GAAAAGTGACAGCAAAGTAG+TGG | 0.540728 | 2:+6001937 | MsG0280006769.01.T01:five_prime_UTR |
| GACTTTATTTATGACACTAA+GGG | 0.541822 | 2:-6004159 | None:intergenic |
| AAAGAAAGTCCTACCTTGAG+TGG | 0.545417 | 2:+6001910 | MsG0280006769.01.T01:five_prime_UTR |
| TGCAGAGGCATGGGCATGAG+AGG | 0.547127 | 2:+6003046 | MsG0280006769.01.T01:CDS |
| ACTTACTACTTTGGATGGAA+GGG | 0.553717 | 2:+6003827 | MsG0280006769.01.T01:CDS |
| TGATCCAACCTATGAAGAAG+TGG | 0.557696 | 2:+6003878 | MsG0280006769.01.T01:CDS |
| CACAATGTATTTACAAGACA+AGG | 0.557753 | 2:+6003732 | MsG0280006769.01.T01:CDS |
| TACCTTTATAAAGTTCCTCA+AGG | 0.559294 | 2:-6003192 | None:intergenic |
| CAATTGAAATCCAACCAGGC+TGG | 0.559519 | 2:+6003616 | MsG0280006769.01.T01:CDS |
| AATTCCATTGTCTATGGCAA+TGG | 0.561820 | 2:-6003856 | None:intergenic |
| ACAGCAAAGTAGTGGAAGAT+GGG | 0.564941 | 2:+6001945 | MsG0280006769.01.T01:exon |
| CTGACCATTGCCATAGACAA+TGG | 0.576926 | 2:+6003852 | MsG0280006769.01.T01:CDS |
| TGTCTTGTAAATACATTGTG+AGG | 0.577798 | 2:-6003729 | None:intergenic |
| CTTACTACTTTGGATGGAAG+GGG | 0.580719 | 2:+6003828 | MsG0280006769.01.T01:CDS |
| TTCAATCCCAGAAGTGCAGA+TGG | 0.585321 | 2:+6002959 | MsG0280006769.01.T01:CDS |
| TAAAGTTCCTCAAGGCTGCA+AGG | 0.586456 | 2:-6003184 | None:intergenic |
| TAAATTGCCTTGCAGCCTTG+AGG | 0.591013 | 2:+6003177 | MsG0280006769.01.T01:CDS |
| TTTCAGCATCAACCGTGCTA+GGG | 0.595565 | 2:-6003977 | None:intergenic |
| CAGCAAAACTGTACCTGTGG+AGG | 0.596250 | 2:+6003584 | MsG0280006769.01.T01:intron |
| GCTGCACTGTCACCTGTTGT+CGG | 0.597326 | 2:-6002899 | None:intergenic |
| TCCAAACTCAGGATGGCAGA+AGG | 0.597371 | 2:+6002930 | MsG0280006769.01.T01:CDS |
| CTAAGATTACCCCTCTGTGA+AGG | 0.605911 | 2:-6003933 | None:intergenic |
| CGACATCACATTCCCTAGCA+CGG | 0.605984 | 2:+6003965 | MsG0280006769.01.T01:CDS |
| CAAAAGATATTACTTGCAGA+AGG | 0.606997 | 2:+6003774 | MsG0280006769.01.T01:CDS |
| AGCTCCATACTTCCAAACTC+AGG | 0.611168 | 2:+6002919 | MsG0280006769.01.T01:CDS |
| ATCCAAAGTAGTAAGTTGGA+AGG | 0.613336 | 2:-6003820 | None:intergenic |
| AACTATACACAAGATGCACT+TGG | 0.613457 | 2:-6004055 | None:intergenic |
| CCATACTTCCAAACTCAGGA+TGG | 0.617408 | 2:+6002923 | MsG0280006769.01.T01:CDS |
| CTAACAATTGAAATCCAACC+AGG | 0.624854 | 2:+6003612 | MsG0280006769.01.T01:CDS |
| GGGCATGAGAGGTCAGTCGT+GGG | 0.626238 | 2:+6003057 | MsG0280006769.01.T01:CDS |
| AGGGAAATTGCATATGCAAG+CGG | 0.628782 | 2:+6003238 | MsG0280006769.01.T01:CDS |
| GAGTCAAGCTCCAAGACGCA+AGG | 0.642529 | 2:+6003138 | MsG0280006769.01.T01:CDS |
| TTGCAGCAAAACTGTACCTG+TGG | 0.678062 | 2:+6003581 | MsG0280006769.01.T01:intron |
| TATGGAGGAATGGGAATGAG+GGG | 0.684119 | 2:+6003016 | MsG0280006769.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATTGAAAATTG+AGG | - | Chr2:6002470-6002489 | None:intergenic | 10.0% |
| !! | ATAAAATGTAGTTACAAAGT+TGG | - | Chr2:6003441-6003460 | None:intergenic | 20.0% |
| !! | GGAAAAACATATATTATGAT+AGG | + | Chr2:6002644-6002663 | MsG0280006769.01.T01:intron | 20.0% |
| !! | GTAACTAAGATCAATTTAAA+AGG | - | Chr2:6002674-6002693 | None:intergenic | 20.0% |
| !! | TATATTATGTGATATACAGT+TGG | + | Chr2:6002373-6002392 | MsG0280006769.01.T01:intron | 20.0% |
| !! | TTTCTGGATTGTATAATAAT+GGG | - | Chr2:6001870-6001889 | None:intergenic | 20.0% |
| !!! | AAATTGAAAATTGAGGATTT+TGG | - | Chr2:6002463-6002482 | None:intergenic | 20.0% |
| !!! | ATATGTTTTTCCATATATCA+TGG | - | Chr2:6002636-6002655 | None:intergenic | 20.0% |
| !!! | TCAAAGCATTTTATGAATTT+TGG | + | Chr2:6002424-6002443 | MsG0280006769.01.T01:intron | 20.0% |
| ! | AAGAAAAGAGAGTTAATAAC+AGG | - | Chr2:6004101-6004120 | None:intergenic | 25.0% |
| ! | AATCCTTCAAGTAATATTGT+TGG | - | Chr2:6004184-6004203 | None:intergenic | 25.0% |
| ! | AATTTATGTTTCCCTTACTT+GGG | - | Chr2:6002568-6002587 | None:intergenic | 25.0% |
| ! | ACATAACAAGCGAAATAAAA+TGG | - | Chr2:6003518-6003537 | None:intergenic | 25.0% |
| ! | AGAGCAATTTATGATCAATA+TGG | + | Chr2:6002851-6002870 | MsG0280006769.01.T01:CDS | 25.0% |
| ! | AGTTTCAATACATTTCTAAC+TGG | + | Chr2:6003373-6003392 | MsG0280006769.01.T01:intron | 25.0% |
| ! | ATTGATCTTAGTTACTTCAA+AGG | + | Chr2:6002679-6002698 | MsG0280006769.01.T01:intron | 25.0% |
| ! | CATAACAAGCGAAATAAAAT+GGG | - | Chr2:6003517-6003536 | None:intergenic | 25.0% |
| ! | CTAAGATCAATTTAAAAGGT+TGG | - | Chr2:6002670-6002689 | None:intergenic | 25.0% |
| ! | TAATTTATGTTTCCCTTACT+TGG | - | Chr2:6002569-6002588 | None:intergenic | 25.0% |
| ! | TTATAAGCTAAAACCAATCA+AGG | - | Chr2:6002308-6002327 | None:intergenic | 25.0% |
| !! | GACTTTATTTATGACACTAA+GGG | - | Chr2:6004162-6004181 | None:intergenic | 25.0% |
| !! | GTTTCTGGATTGTATAATAA+TGG | - | Chr2:6001871-6001890 | None:intergenic | 25.0% |
| !! | TCTGACTTAGTATATTGATT+TGG | + | Chr2:6002797-6002816 | MsG0280006769.01.T01:intron | 25.0% |
| !! | TTTCTTCCATTTTATGACTT+TGG | + | Chr2:6004115-6004134 | MsG0280006769.01.T01:three_prime_UTR | 25.0% |
| !! | TTTGGATTACTATGAGATTT+TGG | + | Chr2:6001968-6001987 | MsG0280006769.01.T01:CDS | 25.0% |
| !! | TTTTATGTTTAAGCCTTGAT+TGG | + | Chr2:6002292-6002311 | MsG0280006769.01.T01:intron | 25.0% |
| !!! | AAAATTGAGGATTTTGGTAA+GGG | - | Chr2:6002457-6002476 | None:intergenic | 25.0% |
| !!! | ATTTTTGGCAAAGATGTATT+TGG | + | Chr2:6003100-6003119 | MsG0280006769.01.T01:CDS | 25.0% |
| !!! | CAAGGCAATTTATTTTCAAT+GGG | - | Chr2:6003169-6003188 | None:intergenic | 25.0% |
| AATACAAGATTCTTTCTCCT+TGG | + | Chr2:6003472-6003491 | MsG0280006769.01.T01:intron | 30.0% | |
| ACATAATATAGCCATCGAAT+TGG | - | Chr2:6002363-6002382 | None:intergenic | 30.0% | |
| AGTCCAACAATATTACTTGA+AGG | + | Chr2:6004178-6004197 | MsG0280006769.01.T01:three_prime_UTR | 30.0% | |
| ATAGAAAACTTGCCATGAAA+TGG | + | Chr2:6002033-6002052 | MsG0280006769.01.T01:CDS | 30.0% | |
| ATAGAATGATGAGCATCATT+TGG | + | Chr2:6002591-6002610 | MsG0280006769.01.T01:intron | 30.0% | |
| ATTATTGAGATCCAATTCGA+TGG | + | Chr2:6002349-6002368 | MsG0280006769.01.T01:intron | 30.0% | |
| CAAAAAGATGAAGATCTCAA+GGG | + | Chr2:6003219-6003238 | MsG0280006769.01.T01:CDS | 30.0% | |
| CAAAAGATATTACTTGCAGA+AGG | + | Chr2:6003774-6003793 | MsG0280006769.01.T01:CDS | 30.0% | |
| CAATAAGTTGCTATACTTGT+AGG | - | Chr2:6003544-6003563 | None:intergenic | 30.0% | |
| CACAATGTATTTACAAGACA+AGG | + | Chr2:6003732-6003751 | MsG0280006769.01.T01:CDS | 30.0% | |
| CATAGACCAAAGTCATAAAA+TGG | - | Chr2:6004124-6004143 | None:intergenic | 30.0% | |
| CTAACCAAAACAGAAAAACA+AGG | - | Chr2:6002236-6002255 | None:intergenic | 30.0% | |
| CTACAAGTATAGCAACTTAT+TGG | + | Chr2:6003542-6003561 | MsG0280006769.01.T01:intron | 30.0% | |
| GTTCAATTGCTACAAAACTA+TGG | + | Chr2:6002159-6002178 | MsG0280006769.01.T01:intron | 30.0% | |
| TACAAGACAAGGTAATGATT+TGG | + | Chr2:6003743-6003762 | MsG0280006769.01.T01:CDS | 30.0% | |
| TACCTTTATAAAGTTCCTCA+AGG | - | Chr2:6003195-6003214 | None:intergenic | 30.0% | |
| TGATGTGAATTAAAAAGCCA+GGG | - | Chr2:6003277-6003296 | None:intergenic | 30.0% | |
| TGTCTTGTAAATACATTGTG+AGG | - | Chr2:6003732-6003751 | None:intergenic | 30.0% | |
| TTCAATACATTTCTAACTGG+CGG | + | Chr2:6003376-6003395 | MsG0280006769.01.T01:intron | 30.0% | |
| TTGATGTGAATTAAAAAGCC+AGG | - | Chr2:6003278-6003297 | None:intergenic | 30.0% | |
| ! | GGACTTTATTTATGACACTA+AGG | - | Chr2:6004163-6004182 | None:intergenic | 30.0% |
| ! | TCATAAATTGCTCTCTTTTG+TGG | - | Chr2:6002845-6002864 | None:intergenic | 30.0% |
| !! | ATATTGATTTGGCTTCATGT+AGG | + | Chr2:6002808-6002827 | MsG0280006769.01.T01:intron | 30.0% |
| !! | GAAAATTGAGGATTTTGGTA+AGG | - | Chr2:6002458-6002477 | None:intergenic | 30.0% |
| !! | GCAAGGCAATTTATTTTCAA+TGG | - | Chr2:6003170-6003189 | None:intergenic | 30.0% |
| !! | TGTGAAGGATTTTTGGAAAT+TGG | - | Chr2:6003921-6003940 | None:intergenic | 30.0% |
| !!! | ATTGCCTTGTTTTTCTGTTT+TGG | + | Chr2:6002229-6002248 | MsG0280006769.01.T01:intron | 30.0% |
| !!! | CAAGTTTTTTGTCTTGTTTC+TGG | - | Chr2:6001886-6001905 | None:intergenic | 30.0% |
| AAAAATATCGCCAAAAGACC+TGG | - | Chr2:6003086-6003105 | None:intergenic | 35.0% | |
| AAAATCACTTTCCCAGAGAA+AGG | + | Chr2:6003651-6003670 | MsG0280006769.01.T01:CDS | 35.0% | |
| AAAATGCTTTGACCCTTCTT+TGG | - | Chr2:6002416-6002435 | None:intergenic | 35.0% | |
| AAATAAAGCCGCATTCAGAT+TGG | - | Chr2:6002503-6002522 | None:intergenic | 35.0% | |
| AAATGCTTTGACCCTTCTTT+GGG | - | Chr2:6002415-6002434 | None:intergenic | 35.0% | |
| AACTATACACAAGATGCACT+TGG | - | Chr2:6004058-6004077 | None:intergenic | 35.0% | |
| AACTTACTACTTTGGATGGA+AGG | + | Chr2:6003826-6003845 | MsG0280006769.01.T01:CDS | 35.0% | |
| AATTCCATTGTCTATGGCAA+TGG | - | Chr2:6003859-6003878 | None:intergenic | 35.0% | |
| ACTTACTACTTTGGATGGAA+GGG | + | Chr2:6003827-6003846 | MsG0280006769.01.T01:CDS | 35.0% | |
| AGCCTTGAGGAACTTTATAA+AGG | + | Chr2:6003190-6003209 | MsG0280006769.01.T01:CDS | 35.0% | |
| ATACAGTTGGATGAAAACTG+AGG | + | Chr2:6002386-6002405 | MsG0280006769.01.T01:intron | 35.0% | |
| ATATCTGCAGCAATGACATT+TGG | - | Chr2:6003687-6003706 | None:intergenic | 35.0% | |
| ATTGTTAGTATTTCCTCCAC+AGG | - | Chr2:6003600-6003619 | None:intergenic | 35.0% | |
| CAGATTCTGTGAACATTTCA+TGG | - | Chr2:6002781-6002800 | None:intergenic | 35.0% | |
| CATGAACTGATGTAAAACCA+AGG | - | Chr2:6002734-6002753 | None:intergenic | 35.0% | |
| CCAAAAAGATGAAGATCTCA+AGG | + | Chr2:6003218-6003237 | MsG0280006769.01.T01:CDS | 35.0% | |
| CCAGAACTAAGAAATGTTCA+TGG | + | Chr2:6004007-6004026 | MsG0280006769.01.T01:exon | 35.0% | |
| CCATGAACATTTCTTAGTTC+TGG | - | Chr2:6004010-6004029 | None:intergenic | 35.0% | |
| CTAACAATTGAAATCCAACC+AGG | + | Chr2:6003612-6003631 | MsG0280006769.01.T01:CDS | 35.0% | |
| GATGTGAATTAAAAAGCCAG+GGG | - | Chr2:6003276-6003295 | None:intergenic | 35.0% | |
| TATTGTCAGGATTCTTGTCA+GGG | - | Chr2:6002061-6002080 | None:intergenic | 35.0% | |
| TCAGCATCATTCTTATTGTC+AGG | - | Chr2:6002074-6002093 | None:intergenic | 35.0% | |
| TGGATCAATTCCATTGTCTA+TGG | - | Chr2:6003865-6003884 | None:intergenic | 35.0% | |
| TTATTGTCAGGATTCTTGTC+AGG | - | Chr2:6002062-6002081 | None:intergenic | 35.0% | |
| TTCCAAAAATCCTTCACAGA+GGG | + | Chr2:6003923-6003942 | MsG0280006769.01.T01:CDS | 35.0% | |
| TTCCAACTTACTACTTTGGA+TGG | + | Chr2:6003822-6003841 | MsG0280006769.01.T01:CDS | 35.0% | |
| TTCCATCCAAAGTAGTAAGT+TGG | - | Chr2:6003827-6003846 | None:intergenic | 35.0% | |
| TTGACTTTCATCCCAAGTAA+GGG | + | Chr2:6002554-6002573 | MsG0280006769.01.T01:intron | 35.0% | |
| TTTCCAAAAATCCTTCACAG+AGG | + | Chr2:6003922-6003941 | MsG0280006769.01.T01:CDS | 35.0% | |
| ! | ACTCATATCTGAAGCATATG+AGG | + | Chr2:6002106-6002125 | MsG0280006769.01.T01:CDS | 35.0% |
| ! | ACTGATCATTCATGTTTCTG+AGG | + | Chr2:6002185-6002204 | MsG0280006769.01.T01:intron | 35.0% |
| ! | AGGTCTTTTGGCGATATTTT+TGG | + | Chr2:6003085-6003104 | MsG0280006769.01.T01:CDS | 35.0% |
| ! | ATCCAAAGTAGTAAGTTGGA+AGG | - | Chr2:6003823-6003842 | None:intergenic | 35.0% |
| ! | CCTTGAGATCTTCATCTTTT+TGG | - | Chr2:6003221-6003240 | None:intergenic | 35.0% |
| ! | GGATTACTATGAGATTTTGG+AGG | + | Chr2:6001971-6001990 | MsG0280006769.01.T01:CDS | 35.0% |
| ! | GGCATATTTGCAGAAGTTTT+TGG | + | Chr2:6002980-6002999 | MsG0280006769.01.T01:CDS | 35.0% |
| ! | GTTTTTCCATATATCATGGC+CGG | - | Chr2:6002632-6002651 | None:intergenic | 35.0% |
| ! | TTTGACTTTCATCCCAAGTA+AGG | + | Chr2:6002553-6002572 | MsG0280006769.01.T01:intron | 35.0% |
| !! | GGCAATTTATTTTCAATGGG+AGG | - | Chr2:6003166-6003185 | None:intergenic | 35.0% |
| !! | TTGTCGGCATTCCATTTTTA+AGG | - | Chr2:6002886-6002905 | None:intergenic | 35.0% |
| !!! | CTTGGTTTTACATCAGTTCA+TGG | + | Chr2:6002732-6002751 | MsG0280006769.01.T01:intron | 35.0% |
| !!! | GCAGAATGAGAGTTTTTTGT+TGG | + | Chr2:6003334-6003353 | MsG0280006769.01.T01:intron | 35.0% |
| AAAAATGGAATGCCGACAAC+AGG | + | Chr2:6002887-6002906 | MsG0280006769.01.T01:CDS | 40.0% | |
| AAAGAAAGTCCTACCTTGAG+TGG | + | Chr2:6001910-6001929 | MsG0280006769.01.T01:five_prime_UTR | 40.0% | |
| AAATATGCCATCTGCACTTC+TGG | - | Chr2:6002969-6002988 | None:intergenic | 40.0% | |
| AATATGCCATCTGCACTTCT+GGG | - | Chr2:6002968-6002987 | None:intergenic | 40.0% | |
| AATGCTTTGACCCTTCTTTG+GGG | - | Chr2:6002414-6002433 | None:intergenic | 40.0% | |
| ACACAAGATGCACTTGGTAA+TGG | - | Chr2:6004052-6004071 | None:intergenic | 40.0% | |
| AGGGAAATTGCATATGCAAG+CGG | + | Chr2:6003238-6003257 | MsG0280006769.01.T01:CDS | 40.0% | |
| CACCTTCCAACTTACTACTT+TGG | + | Chr2:6003818-6003837 | MsG0280006769.01.T01:CDS | 40.0% | |
| CTTACTACTTTGGATGGAAG+GGG | + | Chr2:6003828-6003847 | MsG0280006769.01.T01:CDS | 40.0% | |
| GAAAAGTGACAGCAAAGTAG+TGG | + | Chr2:6001937-6001956 | MsG0280006769.01.T01:five_prime_UTR | 40.0% | |
| GGAGAAAGCAGCCTTAAAAA+TGG | + | Chr2:6002872-6002891 | MsG0280006769.01.T01:CDS | 40.0% | |
| GTTGCTCATTTCCTTTCTCT+GGG | - | Chr2:6003665-6003684 | None:intergenic | 40.0% | |
| TCATTCCCATTCCTCCATAA+GGG | - | Chr2:6003015-6003034 | None:intergenic | 40.0% | |
| TCCAAAAATCCTTCACAGAG+GGG | + | Chr2:6003924-6003943 | MsG0280006769.01.T01:CDS | 40.0% | |
| TGATCCAACCTATGAAGAAG+TGG | + | Chr2:6003878-6003897 | MsG0280006769.01.T01:CDS | 40.0% | |
| TTATGGAGGAATGGGAATGA+GGG | + | Chr2:6003015-6003034 | MsG0280006769.01.T01:CDS | 40.0% | |
| TTCACTGTCCAATCTGAATG+CGG | + | Chr2:6002492-6002511 | MsG0280006769.01.T01:intron | 40.0% | |
| TTTGCTGCAAACATACATGC+AGG | - | Chr2:6003571-6003590 | None:intergenic | 40.0% | |
| ! | AAAGTAGTGGAAGATGGGTT+TGG | + | Chr2:6001950-6001969 | MsG0280006769.01.T01:exon | 40.0% |
| ! | ACAGCAAAGTAGTGGAAGAT+GGG | + | Chr2:6001945-6001964 | MsG0280006769.01.T01:exon | 40.0% |
| ! | TTTTCTCTTCCACTCAAGGT+AGG | - | Chr2:6001922-6001941 | None:intergenic | 40.0% |
| !! | TCACTTTTCTCTTCCACTCA+AGG | - | Chr2:6001926-6001945 | None:intergenic | 40.0% |
| !!! | TTTGGCTTTTCAAGCCCTTA+TGG | + | Chr2:6002998-6003017 | MsG0280006769.01.T01:CDS | 40.0% |
| AAACTGAGGATCCCCAAAGA+AGG | + | Chr2:6002400-6002419 | MsG0280006769.01.T01:intron | 45.0% | |
| AACTGAGGATCCCCAAAGAA+GGG | + | Chr2:6002401-6002420 | MsG0280006769.01.T01:intron | 45.0% | |
| AATCCAACCAGGCTGGAAAA+AGG | + | Chr2:6003623-6003642 | MsG0280006769.01.T01:CDS | 45.0% | |
| ACCTATGAAGAAGTGGTTGC+CGG | + | Chr2:6003885-6003904 | MsG0280006769.01.T01:CDS | 45.0% | |
| AGCTCCATACTTCCAAACTC+AGG | + | Chr2:6002919-6002938 | MsG0280006769.01.T01:CDS | 45.0% | |
| AGTTCATGGACCATGTTGTG+GGG | + | Chr2:6002746-6002765 | MsG0280006769.01.T01:intron | 45.0% | |
| ATCCAACCAGGCTGGAAAAA+GGG | + | Chr2:6003624-6003643 | MsG0280006769.01.T01:CDS | 45.0% | |
| CAATTGAAATCCAACCAGGC+TGG | + | Chr2:6003616-6003635 | MsG0280006769.01.T01:CDS | 45.0% | |
| CAGTTCATGGACCATGTTGT+GGG | + | Chr2:6002745-6002764 | MsG0280006769.01.T01:intron | 45.0% | |
| CCATACTTCCAAACTCAGGA+TGG | + | Chr2:6002923-6002942 | MsG0280006769.01.T01:CDS | 45.0% | |
| CCATCCTGAGTTTGGAAGTA+TGG | - | Chr2:6002926-6002945 | None:intergenic | 45.0% | |
| CTAAGATTACCCCTCTGTGA+AGG | - | Chr2:6003936-6003955 | None:intergenic | 45.0% | |
| CTCATTCCCATTCCTCCATA+AGG | - | Chr2:6003016-6003035 | None:intergenic | 45.0% | |
| CTGACCATTGCCATAGACAA+TGG | + | Chr2:6003852-6003871 | MsG0280006769.01.T01:CDS | 45.0% | |
| CTTATGGAGGAATGGGAATG+AGG | + | Chr2:6003014-6003033 | MsG0280006769.01.T01:CDS | 45.0% | |
| CTTCACAGAGGGGTAATCTT+AGG | + | Chr2:6003934-6003953 | MsG0280006769.01.T01:CDS | 45.0% | |
| GATGAGCATCATTTGGTCCA+GGG | + | Chr2:6002598-6002617 | MsG0280006769.01.T01:intron | 45.0% | |
| GCAACCACTTCTTCATAGGT+TGG | - | Chr2:6003885-6003904 | None:intergenic | 45.0% | |
| GCATTCAGATTGGACAGTGA+AGG | - | Chr2:6002493-6002512 | None:intergenic | 45.0% | |
| GGGAAATTGCATATGCAAGC+GGG | + | Chr2:6003239-6003258 | MsG0280006769.01.T01:CDS | 45.0% | |
| GGTTGCTCATTTCCTTTCTC+TGG | - | Chr2:6003666-6003685 | None:intergenic | 45.0% | |
| GTTTGTACATCCCCACAACA+TGG | - | Chr2:6002759-6002778 | None:intergenic | 45.0% | |
| TAAAGTTCCTCAAGGCTGCA+AGG | - | Chr2:6003187-6003206 | None:intergenic | 45.0% | |
| TAAATTGCCTTGCAGCCTTG+AGG | + | Chr2:6003177-6003196 | MsG0280006769.01.T01:CDS | 45.0% | |
| TACACAGTCAGTAACGTCCA+AGG | - | Chr2:6003492-6003511 | None:intergenic | 45.0% | |
| TATGGAGGAATGGGAATGAG+GGG | + | Chr2:6003016-6003035 | MsG0280006769.01.T01:CDS | 45.0% | |
| TCAAGCCCTTATGGAGGAAT+GGG | + | Chr2:6003007-6003026 | MsG0280006769.01.T01:CDS | 45.0% | |
| TCAGTTCATGGACCATGTTG+TGG | + | Chr2:6002744-6002763 | MsG0280006769.01.T01:intron | 45.0% | |
| TGATGAGCATCATTTGGTCC+AGG | + | Chr2:6002597-6002616 | MsG0280006769.01.T01:intron | 45.0% | |
| TTCAAGCCCTTATGGAGGAA+TGG | + | Chr2:6003006-6003025 | MsG0280006769.01.T01:CDS | 45.0% | |
| TTGCAGCAAAACTGTACCTG+TGG | + | Chr2:6003581-6003600 | MsG0280006769.01.T01:intron | 45.0% | |
| TTTCAGCATCAACCGTGCTA+GGG | - | Chr2:6003980-6003999 | None:intergenic | 45.0% | |
| ! | ACCCCTCTGTGAAGGATTTT+TGG | - | Chr2:6003928-6003947 | None:intergenic | 45.0% |
| ! | ATTTTCTACGCAGTTGCACG+CGG | + | Chr2:6002702-6002721 | MsG0280006769.01.T01:intron | 45.0% |
| ! | GACAGCAAAGTAGTGGAAGA+TGG | + | Chr2:6001944-6001963 | MsG0280006769.01.T01:exon | 45.0% |
| ! | TTCAATCCCAGAAGTGCAGA+TGG | + | Chr2:6002959-6002978 | MsG0280006769.01.T01:CDS | 45.0% |
| ! | TTTGTTCCCTTTTTCCAGCC+TGG | - | Chr2:6003633-6003652 | None:intergenic | 45.0% |
| ACCTTCTGCCATCCTGAGTT+TGG | - | Chr2:6002934-6002953 | None:intergenic | 50.0% | |
| CAGCAAAACTGTACCTGTGG+AGG | + | Chr2:6003584-6003603 | MsG0280006769.01.T01:intron | 50.0% | |
| CGACATCACATTCCCTAGCA+CGG | + | Chr2:6003965-6003984 | MsG0280006769.01.T01:CDS | 50.0% | |
| CGATCTCCGGCCATGATATA+TGG | + | Chr2:6002623-6002642 | MsG0280006769.01.T01:intron | 50.0% | |
| CTCAGGATGGCAGAAGGTTT+AGG | + | Chr2:6002936-6002955 | MsG0280006769.01.T01:CDS | 50.0% | |
| GTTTCAGCATCAACCGTGCT+AGG | - | Chr2:6003981-6004000 | None:intergenic | 50.0% | |
| TCCAAACTCAGGATGGCAGA+AGG | + | Chr2:6002930-6002949 | MsG0280006769.01.T01:CDS | 50.0% | |
| ! | TGGAAGGTGTAGCTTCTGCT+TGG | - | Chr2:6003807-6003826 | None:intergenic | 50.0% |
| ! | TTCCCTTTTTCCAGCCTGGT+TGG | - | Chr2:6003629-6003648 | None:intergenic | 50.0% |
| !! | CTTGTCAGGGTGCCATTTCA+TGG | - | Chr2:6002048-6002067 | None:intergenic | 50.0% |
| !! | GGCTTTTCAAGCCCTTATGG+AGG | + | Chr2:6003001-6003020 | MsG0280006769.01.T01:CDS | 50.0% |
| AAGAAGTGGTTGCCGGCGAA+GGG | + | Chr2:6003892-6003911 | MsG0280006769.01.T01:CDS | 55.0% | |
| GAGTCAAGCTCCAAGACGCA+AGG | + | Chr2:6003138-6003157 | MsG0280006769.01.T01:CDS | 55.0% | |
| GCCGGCAACCACTTCTTCAT+AGG | - | Chr2:6003889-6003908 | None:intergenic | 55.0% | |
| GCTGCACTGTCACCTGTTGT+CGG | - | Chr2:6002902-6002921 | None:intergenic | 55.0% | |
| GGAAATTGGCATCCCTTCGC+CGG | - | Chr2:6003907-6003926 | None:intergenic | 55.0% | |
| GTTGCACGCGGATGATACCT+TGG | + | Chr2:6002714-6002733 | MsG0280006769.01.T01:intron | 55.0% | |
| TTGGTCCAGGGTTCGATCTC+CGG | + | Chr2:6002610-6002629 | MsG0280006769.01.T01:intron | 55.0% | |
| ! | TCGTGGGTGTCCAGGTCTTT+TGG | + | Chr2:6003073-6003092 | MsG0280006769.01.T01:CDS | 55.0% |
| GAAGAAGTGGTTGCCGGCGA+AGG | + | Chr2:6003891-6003910 | MsG0280006769.01.T01:CDS | 60.0% | |
| GCGGGTAAATGCTCTTCCCC+TGG | + | Chr2:6003257-6003276 | MsG0280006769.01.T01:intron | 60.0% | |
| GGAGGAATGGGAATGAGGGG+CGG | + | Chr2:6003019-6003038 | MsG0280006769.01.T01:CDS | 60.0% | |
| GGGCATGAGAGGTCAGTCGT+GGG | + | Chr2:6003057-6003076 | MsG0280006769.01.T01:CDS | 60.0% | |
| TGGGCATGAGAGGTCAGTCG+TGG | + | Chr2:6003056-6003075 | MsG0280006769.01.T01:CDS | 60.0% | |
| ! | TGCAGAGGCATGGGCATGAG+AGG | + | Chr2:6003046-6003065 | MsG0280006769.01.T01:CDS | 60.0% |
| !! | ATGGGAGGTGCCTTGCGTCT+TGG | - | Chr2:6003151-6003170 | None:intergenic | 60.0% |
| CATGGCCGGAGATCGAACCC+TGG | - | Chr2:6002618-6002637 | None:intergenic | 65.0% | |
| GAGGTCAGTCGTGGGTGTCC+AGG | + | Chr2:6003065-6003084 | MsG0280006769.01.T01:CDS | 65.0% | |
| GGAATGGGAATGAGGGGCGG+CGG | + | Chr2:6003022-6003041 | MsG0280006769.01.T01:CDS | 65.0% | |
| ATGAGGGGCGGCGGCTGCAG+AGG | + | Chr2:6003031-6003050 | MsG0280006769.01.T01:CDS | 75.0% | |
| ! | GGCGGCGGCTGCAGAGGCAT+GGG | + | Chr2:6003037-6003056 | MsG0280006769.01.T01:CDS | 75.0% |
| ! | GGGCGGCGGCTGCAGAGGCA+TGG | + | Chr2:6003036-6003055 | MsG0280006769.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 6001869 | 6004232 | 6001869 | ID=MsG0280006769.01;Name=MsG0280006769.01 |
| Chr2 | mRNA | 6001869 | 6004232 | 6001869 | ID=MsG0280006769.01.T01;Parent=MsG0280006769.01;Name=MsG0280006769.01.T01;_AED=0.49;_eAED=0.49;_QI=94|1|1|1|1|1|3|216|341 |
| Chr2 | exon | 6001869 | 6002127 | 6001869 | ID=MsG0280006769.01.T01:exon:2445;Parent=MsG0280006769.01.T01 |
| Chr2 | exon | 6002830 | 6003260 | 6002830 | ID=MsG0280006769.01.T01:exon:2446;Parent=MsG0280006769.01.T01 |
| Chr2 | exon | 6003587 | 6004232 | 6003587 | ID=MsG0280006769.01.T01:exon:2447;Parent=MsG0280006769.01.T01 |
| Chr2 | five_prime_UTR | 6001869 | 6001962 | 6001869 | ID=MsG0280006769.01.T01:five_prime_utr;Parent=MsG0280006769.01.T01 |
| Chr2 | CDS | 6001963 | 6002127 | 6001963 | ID=MsG0280006769.01.T01:cds;Parent=MsG0280006769.01.T01 |
| Chr2 | CDS | 6002830 | 6003260 | 6002830 | ID=MsG0280006769.01.T01:cds;Parent=MsG0280006769.01.T01 |
| Chr2 | CDS | 6003587 | 6004016 | 6003587 | ID=MsG0280006769.01.T01:cds;Parent=MsG0280006769.01.T01 |
| Chr2 | three_prime_UTR | 6004017 | 6004232 | 6004017 | ID=MsG0280006769.01.T01:three_prime_utr;Parent=MsG0280006769.01.T01 |
| Gene Sequence |
| Protein sequence |
