AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010736.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010736.01.T01 MTR_2g090390 79.076 368 57 3 15 382 83 430 0.0 583
MsG0280010736.01.T01 MTR_4g078230 57.682 371 130 6 15 382 82 428 2.96e-143 414
MsG0280010736.01.T01 MTR_7g073620 38.810 353 189 4 15 365 54 381 5.93e-87 269
MsG0280010736.01.T01 MTR_8g005670 38.746 351 188 4 17 365 108 433 2.41e-86 269
MsG0280010736.01.T01 MTR_7g073550 39.031 351 191 3 15 365 102 429 2.76e-86 269
MsG0280010736.01.T01 MTR_7g073550 39.031 351 191 3 15 365 101 428 2.80e-86 269
MsG0280010736.01.T01 MTR_8g006550 38.746 351 188 4 17 365 111 436 1.02e-85 268
MsG0280010736.01.T01 MTR_8g005270 38.746 351 188 4 17 365 91 416 1.31e-85 267
MsG0280010736.01.T01 MTR_7g111740 37.912 364 197 6 5 368 95 429 9.83e-83 259
MsG0280010736.01.T01 MTR_5g020890 39.607 356 186 7 12 364 70 399 5.70e-82 257
MsG0280010736.01.T01 MTR_4g043760 36.000 350 198 4 15 364 77 400 3.73e-77 244
MsG0280010736.01.T01 MTR_1g085430 35.933 359 203 5 11 368 71 403 2.81e-76 241
MsG0280010736.01.T01 MTR_1g085420 35.475 358 206 4 11 368 71 403 1.06e-74 238
MsG0280010736.01.T01 MTR_1g085310 35.519 366 206 6 5 368 62 399 6.96e-74 235
MsG0280010736.01.T01 MTR_3g112060 33.978 362 204 6 11 368 65 395 3.85e-73 234
MsG0280010736.01.T01 MTR_1g085350 35.150 367 205 7 5 368 122 458 2.76e-72 233
MsG0280010736.01.T01 MTR_0005s0150 35.621 306 169 5 61 364 22 301 7.47e-63 204
MsG0280010736.01.T01 MTR_1g085320 33.148 359 198 7 11 368 70 387 5.59e-61 201
MsG0280010736.01.T01 MTR_7g073320 36.111 108 55 1 258 365 15 108 9.98e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010736.01.T01 AT2G20680 57.341 361 128 6 11 369 81 417 1.29e-138 402
MsG0280010736.01.T01 AT4G28320 55.676 370 136 6 15 382 84 427 2.75e-136 396
MsG0280010736.01.T01 AT5G66460 37.293 362 197 4 5 364 64 397 5.71e-82 257
MsG0280010736.01.T01 AT5G01930 37.607 351 196 4 15 365 90 417 1.48e-81 256
MsG0280010736.01.T01 AT3G10900 34.551 356 201 7 15 365 72 400 1.90e-73 234
MsG0280010736.01.T01 AT3G10890 35.429 350 199 6 22 369 81 405 1.49e-72 232
MsG0280010736.01.T01 AT1G02310 33.333 357 206 5 15 368 74 401 8.82e-67 217
MsG0280010736.01.T01 AT1G02310 32.964 361 210 5 11 368 90 421 9.15e-67 218
MsG0280010736.01.T01 AT3G30540 34.601 263 139 6 71 328 91 325 6.83e-49 168

Find 94 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATCAATATCAGAGATTT+TGG 0.195187 2:+74083544 None:intergenic
TGACCGTCAACCCCAATTAT+TGG 0.222691 2:-74083601 MsG0280010736.01.T01:CDS
GAGTCTGGATGCCCAATAAT+TGG 0.238600 2:+74083589 None:intergenic
GGTTCGTCAAATGCTGAAAA+AGG 0.257093 2:-74086787 MsG0280010736.01.T01:CDS
AGTTATCATATGACAATTAA+AGG 0.262418 2:+74085095 None:intergenic
AATCATTCCAAATCGAAATT+AGG 0.273695 2:+74082684 None:intergenic
TAATAAAATCTATTAGAAAA+TGG 0.281643 2:-74082577 MsG0280010736.01.T01:three_prime_UTR
GAGGAATATTCTGATGATTA+TGG 0.283488 2:-74082921 MsG0280010736.01.T01:CDS
GACCGTCAACCCCAATTATT+GGG 0.317018 2:-74083600 MsG0280010736.01.T01:CDS
TAGTTTGGCAATTCTTAGTT+GGG 0.322364 2:-74082950 MsG0280010736.01.T01:CDS
GCAATATCCTAATTTCGATT+TGG 0.338488 2:-74082691 MsG0280010736.01.T01:three_prime_UTR
CTGGAGCAGGCGCTTTAGTT+TGG 0.343911 2:-74082965 MsG0280010736.01.T01:CDS
TTAGTTTGGCAATTCTTAGT+TGG 0.347632 2:-74082951 MsG0280010736.01.T01:CDS
GGGTTGACGGTCAAATCCTT+TGG 0.352850 2:+74083611 None:intergenic
TACAGTATGGAATAGATATC+TGG 0.360245 2:-74082753 MsG0280010736.01.T01:three_prime_UTR
GTCAAATCCTTTGGGTCATT+AGG 0.369609 2:+74083620 None:intergenic
GATTTAAGTGACTACACATT+GGG 0.373083 2:-74082720 MsG0280010736.01.T01:three_prime_UTR
AGTCTGGATGCCCAATAATT+GGG 0.380711 2:+74083590 None:intergenic
AAGCAAGGCAAAATGGAATA+AGG 0.383619 2:-74085424 MsG0280010736.01.T01:CDS
GGTCGGATACAGTGAAGTTC+TGG 0.391879 2:+74083048 None:intergenic
TATAAAACAATCATGCAGAT+TGG 0.397582 2:-74082859 MsG0280010736.01.T01:CDS
CCGGTCCTGTTCTCCGAATA+CGG 0.405166 2:-74083086 MsG0280010736.01.T01:CDS
GATATAATCAGACCCGAGTC+TGG 0.407268 2:+74083574 None:intergenic
GGTTGACGGTCAAATCCTTT+GGG 0.409738 2:+74083612 None:intergenic
GACTCACTGTTTGTAGAACT+TGG 0.410613 2:-74086753 MsG0280010736.01.T01:CDS
AGCAATCCTTACCATTGATC+CGG 0.418166 2:+74083503 None:intergenic
ATAAAACAATCATGCAGATT+GGG 0.418742 2:-74082858 MsG0280010736.01.T01:CDS
CATTCCCCACGGTCAGCATA+TGG 0.420083 2:+74083657 None:intergenic
ATAGCAGAAGCAAGGCAAAA+TGG 0.422959 2:-74085431 MsG0280010736.01.T01:CDS
AGTAATAACTTGCAACCATA+TGG 0.423959 2:-74085387 MsG0280010736.01.T01:CDS
AAAGGGATGGATTAATCAAC+AGG 0.429962 2:-74082829 MsG0280010736.01.T01:CDS
ATAATCCGTATTCGGAGAAC+AGG 0.448568 2:+74083081 None:intergenic
AGAACTTGGGCTTTCAATGA+TGG 0.449779 2:-74086739 MsG0280010736.01.T01:CDS
TACTGACTCTTCCCACCATA+TGG 0.450859 2:+74085372 None:intergenic
TGTGTTGATCGACTTTCCGC+TGG 0.459954 2:+74082891 None:intergenic
ATGCTGACCGTGGGGAATGA+AGG 0.467308 2:-74083653 MsG0280010736.01.T01:CDS
GACTCGGGTCTGATTATATC+CGG 0.475191 2:-74083571 MsG0280010736.01.T01:CDS
GGAAGAGTCAGTATGTCAAA+TGG 0.484963 2:-74085362 MsG0280010736.01.T01:CDS
TTCATATCTACCCGGATCAA+TGG 0.488013 2:-74083514 MsG0280010736.01.T01:intron
AACTGAAATTTGTCAACAAG+TGG 0.489345 2:-74083151 MsG0280010736.01.T01:CDS
TCTGCTAAGAGAAACAAGTC+TGG 0.492117 2:-74082984 MsG0280010736.01.T01:CDS
ATGCTTTCCCACATTGAAGA+TGG 0.497123 2:-74083128 MsG0280010736.01.T01:CDS
ACTCACTGTTTGTAGAACTT+GGG 0.499364 2:-74086752 MsG0280010736.01.T01:CDS
GGTCATTTCTATATTCAATC+CGG 0.499909 2:+74084139 None:intergenic
CGTTGCATGACTGATCGTTC+CGG 0.503031 2:-74084081 MsG0280010736.01.T01:CDS
TGCCCAATAATTGGGGTTGA+CGG 0.509521 2:+74083598 None:intergenic
TGCAGATTGGGCAAAGCAAA+GGG 0.519046 2:-74082846 MsG0280010736.01.T01:CDS
CTCTATGTTTGCAGCCCTTG+AGG 0.527945 2:-74084232 MsG0280010736.01.T01:CDS
TTTCCTGCAGGAGTGGATAG+AGG 0.531846 2:-74083714 MsG0280010736.01.T01:intron
AATTATTGGGCATCCAGACT+CGG 0.535117 2:-74083587 MsG0280010736.01.T01:CDS
AAGAGAAACAAGTCTGGAGC+AGG 0.538235 2:-74082978 MsG0280010736.01.T01:CDS
GAAGAGTCAGTATGTCAAAT+GGG 0.540890 2:-74085361 MsG0280010736.01.T01:CDS
CACCTCAGTTCATATCTACC+CGG 0.542770 2:-74083522 MsG0280010736.01.T01:CDS
TGATTTAAGTGACTACACAT+TGG 0.544263 2:-74082721 MsG0280010736.01.T01:three_prime_UTR
ACTTACTTGGAGAGTGTCGC+CGG 0.545828 2:+74084062 None:intergenic
ATGCAGATTGGGCAAAGCAA+AGG 0.550925 2:-74082847 MsG0280010736.01.T01:CDS
TGTCAAATGGGCATGGCAAG+AGG 0.553689 2:-74085349 MsG0280010736.01.T01:CDS
TGCAAGTTATTACTAAGCAA+AGG 0.560891 2:+74085396 None:intergenic
ATTATTGGGCATCCAGACTC+GGG 0.562036 2:-74083586 MsG0280010736.01.T01:CDS
GTCAAATGGGCATGGCAAGA+GGG 0.566308 2:-74085348 MsG0280010736.01.T01:CDS
GCAATCCTTACCATTGATCC+GGG 0.572318 2:+74083504 None:intergenic
TTATGGTCCTAATGACCCAA+AGG 0.573542 2:-74083627 MsG0280010736.01.T01:CDS
AATAACTTGCAACCATATGG+TGG 0.573683 2:-74085384 MsG0280010736.01.T01:CDS
TTCTGCAGACTGTCTTGACA+AGG 0.576048 2:-74084175 MsG0280010736.01.T01:CDS
GTCAGTATGTCAAATGGGCA+TGG 0.579900 2:-74085356 MsG0280010736.01.T01:CDS
AATGCTCTTCAAATTTCACC+TGG 0.579990 2:-74086709 MsG0280010736.01.T01:CDS
GTGTTGATCGACTTTCCGCT+GGG 0.580201 2:+74082892 None:intergenic
GTTTGGCAATTCTTAGTTGG+GGG 0.582836 2:-74082948 MsG0280010736.01.T01:CDS
AATTAAAGGCATACAACATG+TGG 0.584134 2:+74085109 None:intergenic
GAGTGTATAGTGTGGTAGCA+TGG 0.589089 2:-74082658 MsG0280010736.01.T01:three_prime_UTR
AGTTTGGCAATTCTTAGTTG+GGG 0.590382 2:-74082949 MsG0280010736.01.T01:CDS
CCGTATTCGGAGAACAGGAC+CGG 0.591091 2:+74083086 None:intergenic
GATTGGGCAAAGCAAAGGGA+TGG 0.591604 2:-74082842 MsG0280010736.01.T01:CDS
CTTGCTTCATCAAAGTGACC+AGG 0.594523 2:+74086691 None:intergenic
TTCATCGCCATCTTCAATGT+GGG 0.596395 2:+74083121 None:intergenic
TCAAATGGGCATGGCAAGAG+GGG 0.602579 2:-74085347 MsG0280010736.01.T01:intron
GTCTGGATGCCCAATAATTG+GGG 0.605878 2:+74083591 None:intergenic
CGATGAAGTACTGAAGAAGC+CGG 0.608266 2:-74083105 MsG0280010736.01.T01:CDS
AAGAACCATATGCTGACCGT+GGG 0.609672 2:-74083662 MsG0280010736.01.T01:CDS
CTTCATCGCCATCTTCAATG+TGG 0.618456 2:+74083120 None:intergenic
ACAGTCTGCAGAAAACTCAA+AGG 0.622133 2:+74084185 None:intergenic
ATAACTTGCAACCATATGGT+GGG 0.626087 2:-74085383 MsG0280010736.01.T01:CDS
GCCACATCATCCATCTCCAA+TGG 0.627521 2:-74088142 MsG0280010736.01.T01:intron
ACCATTGGAGATGGATGATG+TGG 0.629245 2:+74088141 None:intergenic
GGAGTGGATAGAGGAAATGT+CGG 0.641246 2:-74083705 MsG0280010736.01.T01:CDS
ATTACGTCATAGCAGAAGCA+AGG 0.656346 2:-74085439 MsG0280010736.01.T01:CDS
ATTTAAGTGACTACACATTG+GGG 0.670111 2:-74082719 MsG0280010736.01.T01:three_prime_UTR
ATAAAAGCCTTCATTCCCCA+CGG 0.670702 2:+74083646 None:intergenic
CAAGAACCATATGCTGACCG+TGG 0.671483 2:-74083663 MsG0280010736.01.T01:CDS
ATCCGGGTAGATATGAACTG+AGG 0.729379 2:+74083520 None:intergenic
TGATTATGGAATCGTCCCAG+CGG 0.733894 2:-74082907 MsG0280010736.01.T01:CDS
TGATTATTGAGTGTATAGTG+TGG 0.736046 2:-74082666 MsG0280010736.01.T01:three_prime_UTR
GAACGATCAGTCATGCAACG+AGG 0.746364 2:+74084084 None:intergenic
AGAACCATATGCTGACCGTG+GGG 0.750263 2:-74083661 MsG0280010736.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAATCTATTAGAAAA+TGG - Chr2:74088130-74088149 MsG0280010736.01.T01:intron 10.0%
!! TTAGATAATTGAAAATATTA+AGG + Chr2:74082895-74082914 None:intergenic 10.0%
!!! ATTTTAAAACTTTCTTTTTT+TGG - Chr2:74082757-74082776 MsG0280010736.01.T01:three_prime_UTR 10.0%
!! AAAATTAAGTACTTGAAATT+TGG + Chr2:74084948-74084967 None:intergenic 15.0%
!! ATTATTATTATCCTCAAAAA+TGG + Chr2:74083257-74083276 None:intergenic 15.0%
!! TAGAAAAAATGGATAAAATT+TGG + Chr2:74086904-74086923 None:intergenic 15.0%
!! TCAATATCAAATAGAAAAAA+TGG + Chr2:74086915-74086934 None:intergenic 15.0%
!! TTATAAACAATTATAATCAC+AGG + Chr2:74084357-74084376 None:intergenic 15.0%
!! TTTCTATTCTTCAAAAATAA+TGG + Chr2:74085210-74085229 None:intergenic 15.0%
!!! ATCTTACAATATTTAAGTTA+AGG + Chr2:74083020-74083039 None:intergenic 15.0%
!!! ATTTAATAATACTTTTGTAC+TGG - Chr2:74085639-74085658 MsG0280010736.01.T01:intron 15.0%
!!! ATTTTATATATTTCACAACA+TGG + Chr2:74086954-74086973 None:intergenic 15.0%
!!! CAAAAAAACAAATTTTTTCT+GGG - Chr2:74083544-74083563 MsG0280010736.01.T01:CDS 15.0%
!!! TCAAAAAAACAAATTTTTTC+TGG - Chr2:74083543-74083562 MsG0280010736.01.T01:CDS 15.0%
!!! TTAATTATAACTTTTTGCAT+AGG - Chr2:74087502-74087521 MsG0280010736.01.T01:intron 15.0%
!!! TTTTTCTATAAACATTTGAA+GGG + Chr2:74086688-74086707 None:intergenic 15.0%
!! AAAATGGTTAAATTCATGTT+TGG - Chr2:74084504-74084523 MsG0280010736.01.T01:intron 20.0%
!! AAGTAAAACATAAATCTCTA+AGG + Chr2:74084987-74085006 None:intergenic 20.0%
!! AGTTATCATATGACAATTAA+AGG + Chr2:74085615-74085634 None:intergenic 20.0%
!! TGTAATTCTTGAAATAACTA+CGG + Chr2:74085432-74085451 None:intergenic 20.0%
!! TGTAGTATGAGAAAATAATT+AGG + Chr2:74083377-74083396 None:intergenic 20.0%
!! TGTTTATAATAATGGTATCT+TGG - Chr2:74084368-74084387 MsG0280010736.01.T01:intron 20.0%
!! TTATTTCAAGAATTACATCA+AGG - Chr2:74085435-74085454 MsG0280010736.01.T01:CDS 20.0%
!!! ACATAAAAACTAATTTGTGT+CGG + Chr2:74084171-74084190 None:intergenic 20.0%
!!! ATACTTCTTTTACTCAATAA+AGG - Chr2:74086097-74086116 MsG0280010736.01.T01:intron 20.0%
!!! CTTTTTCTATAAACATTTGA+AGG + Chr2:74086689-74086708 None:intergenic 20.0%
!!! TCTTCTCTTAATACATTTTT+TGG - Chr2:74083415-74083434 MsG0280010736.01.T01:intron 20.0%
! AAAAAAAGTTGACTACAGTA+TGG - Chr2:74087941-74087960 MsG0280010736.01.T01:intron 25.0%
! AAAACTTTCTTTCCTTCAAT+CGG + Chr2:74085131-74085150 None:intergenic 25.0%
! AAATTTGTACTGAATGAAGA+AGG + Chr2:74083185-74083204 None:intergenic 25.0%
! AACAACATGAAACTATGAAA+GGG + Chr2:74084144-74084163 None:intergenic 25.0%
! AATCATTCCAAATCGAAATT+AGG + Chr2:74088026-74088045 None:intergenic 25.0%
! ACATAATCAGAACAAATCAT+AGG + Chr2:74084112-74084131 None:intergenic 25.0%
! AGAAGTAAGAAAAGGTTATA+AGG - Chr2:74087380-74087399 MsG0280010736.01.T01:intron 25.0%
! AGATACCTAGTTTATTAGTT+TGG + Chr2:74084408-74084427 None:intergenic 25.0%
! AGGAAAGCTGAATTATTTAT+AGG + Chr2:74083357-74083376 None:intergenic 25.0%
! ATAAAACAATCATGCAGATT+GGG - Chr2:74087849-74087868 MsG0280010736.01.T01:intron 25.0%
! ATAGAAATTATGCTGAACTA+AGG - Chr2:74085223-74085242 MsG0280010736.01.T01:intron 25.0%
! CTTATTATTCTTAACTCAGT+AGG - Chr2:74085669-74085688 MsG0280010736.01.T01:intron 25.0%
! CTTTGTTAGCAAAAAAAAAG+TGG - Chr2:74087918-74087937 MsG0280010736.01.T01:intron 25.0%
! GAAGATTGAATCAAATATAC+AGG - Chr2:74085824-74085843 MsG0280010736.01.T01:intron 25.0%
! GAAGTAAGAAAAGGTTATAA+GGG - Chr2:74087381-74087400 MsG0280010736.01.T01:intron 25.0%
! TACCTAGTAAAACACAATTT+AGG + Chr2:74084789-74084808 None:intergenic 25.0%
! TATAAAACAATCATGCAGAT+TGG - Chr2:74087848-74087867 MsG0280010736.01.T01:intron 25.0%
! TATAATAATGGTATCTTGGT+GGG - Chr2:74084372-74084391 MsG0280010736.01.T01:intron 25.0%
! TCAAAAATGGACAAAATTAG+CGG + Chr2:74083244-74083263 None:intergenic 25.0%
! TCAATGAAGCTTGAAAAATA+AGG + Chr2:74086233-74086252 None:intergenic 25.0%
! TCTGACATAATGACTTTAAA+AGG + Chr2:74085576-74085595 None:intergenic 25.0%
! TTATAATAATGGTATCTTGG+TGG - Chr2:74084371-74084390 MsG0280010736.01.T01:intron 25.0%
! TTATTTATAGGTGAACAACT+AGG + Chr2:74083345-74083364 None:intergenic 25.0%
! TTTATGACCAGAATTGAAAT+CGG + Chr2:74085085-74085104 None:intergenic 25.0%
! TTTATTTACATGTCTTTGGA+GGG - Chr2:74083750-74083769 MsG0280010736.01.T01:intron 25.0%
!! AATAAACTAGGTATCTTTTG+TGG - Chr2:74084412-74084431 MsG0280010736.01.T01:intron 25.0%
!! GAAATCAATATCAGAGATTT+TGG + Chr2:74087166-74087185 None:intergenic 25.0%
!! TTGTTTCATACATCTTTTCT+CGG + Chr2:74087683-74087702 None:intergenic 25.0%
!!! CTTTTTTGATAATCCGTATT+CGG + Chr2:74087637-74087656 None:intergenic 25.0%
!!! GGTTTTTATTTACATGTCTT+TGG - Chr2:74083746-74083765 MsG0280010736.01.T01:intron 25.0%
!!! GTGACTTGTTTTTTGTTTTT+GGG - Chr2:74084207-74084226 MsG0280010736.01.T01:CDS 25.0%
!!! GTTCTTATTTTCTTTACCAT+TGG + Chr2:74082584-74082603 None:intergenic 25.0%
!!! TGACTTGTTTTTTGTTTTTG+GGG - Chr2:74084208-74084227 MsG0280010736.01.T01:CDS 25.0%
!!! TTAAGGTTAGTTTTGAAGAA+GGG - Chr2:74083773-74083792 MsG0280010736.01.T01:intron 25.0%
!!! TTTTATTTACATGTCTTTGG+AGG - Chr2:74083749-74083768 MsG0280010736.01.T01:intron 25.0%
AAAAGAAGCAAAACCCAAAT+GGG + Chr2:74083724-74083743 None:intergenic 30.0%
AAAGTATGTGTTATGGGTAT+GGG - Chr2:74087319-74087338 MsG0280010736.01.T01:intron 30.0%
AACTCCTATGTCAGATAAAA+TGG + Chr2:74085773-74085792 None:intergenic 30.0%
AACTGAAATTTGTCAACAAG+TGG - Chr2:74087556-74087575 MsG0280010736.01.T01:intron 30.0%
AATAAAGGAGTAGTGAGAAA+GGG - Chr2:74086112-74086131 MsG0280010736.01.T01:intron 30.0%
AATAAGGTTAAGAATTTGCG+TGG + Chr2:74086217-74086236 None:intergenic 30.0%
AATTATGCTGAACTAAGGAT+TGG - Chr2:74085228-74085247 MsG0280010736.01.T01:intron 30.0%
ACAACTGAATATGGCAAAAT+TGG - Chr2:74086840-74086859 MsG0280010736.01.T01:intron 30.0%
AGGATTGCTTGAACTTTATA+AGG - Chr2:74087218-74087237 MsG0280010736.01.T01:intron 30.0%
AGTTATGTACTTGTTCCTTT+AGG - Chr2:74084477-74084496 MsG0280010736.01.T01:intron 30.0%
ATAAGGTTAAGAATTTGCGT+GGG + Chr2:74086216-74086235 None:intergenic 30.0%
ATACGTAAGAAAACAGAAAG+TGG + Chr2:74086296-74086315 None:intergenic 30.0%
ATCATAGAAGAACGAATCAT+TGG + Chr2:74085401-74085420 None:intergenic 30.0%
ATGAAGAAGAAATTTGACCT+AGG + Chr2:74086403-74086422 None:intergenic 30.0%
ATTTAAGTGACTACACATTG+GGG - Chr2:74087988-74088007 MsG0280010736.01.T01:intron 30.0%
CAACAACATGAAACTATGAA+AGG + Chr2:74084145-74084164 None:intergenic 30.0%
CATTTATGCTCAAAGTCATT+GGG - Chr2:74087264-74087283 MsG0280010736.01.T01:intron 30.0%
GACATGTACTTAGTTAATTG+AGG - Chr2:74084646-74084665 MsG0280010736.01.T01:intron 30.0%
GAGGAATATTCTGATGATTA+TGG - Chr2:74087786-74087805 MsG0280010736.01.T01:intron 30.0%
GATTTAAGTGACTACACATT+GGG - Chr2:74087987-74088006 MsG0280010736.01.T01:intron 30.0%
GCAATATCCTAATTTCGATT+TGG - Chr2:74088016-74088035 MsG0280010736.01.T01:intron 30.0%
GGTCATTTCTATATTCAATC+CGG + Chr2:74086571-74086590 None:intergenic 30.0%
GTTATGTACTTGTTCCTTTA+GGG - Chr2:74084478-74084497 MsG0280010736.01.T01:intron 30.0%
TACAGTATGGAATAGATATC+TGG - Chr2:74087954-74087973 MsG0280010736.01.T01:intron 30.0%
TAGTTTGGCAATTCTTAGTT+GGG - Chr2:74087757-74087776 MsG0280010736.01.T01:intron 30.0%
TATGACCTAAACGGTAAAAA+AGG + Chr2:74085878-74085897 None:intergenic 30.0%
TCATTTATGCTCAAAGTCAT+TGG - Chr2:74087263-74087282 MsG0280010736.01.T01:intron 30.0%
TGATTATTGAGTGTATAGTG+TGG - Chr2:74088041-74088060 MsG0280010736.01.T01:intron 30.0%
TGATTTAAGTGACTACACAT+TGG - Chr2:74087986-74088005 MsG0280010736.01.T01:intron 30.0%
TGCAAGTTATTACTAAGCAA+AGG + Chr2:74085314-74085333 None:intergenic 30.0%
TTCTATAAACATTTGAAGGG+TGG + Chr2:74086685-74086704 None:intergenic 30.0%
! AAAAGTATGTGTTATGGGTA+TGG - Chr2:74087318-74087337 MsG0280010736.01.T01:intron 30.0%
! AATTAAAGGCATACAACATG+TGG + Chr2:74085601-74085620 None:intergenic 30.0%
! AATTTTGCCATATTCAGTTG+TGG + Chr2:74086841-74086860 None:intergenic 30.0%
! AGGGTAAAAGTATGTGTTAT+GGG - Chr2:74087313-74087332 MsG0280010736.01.T01:intron 30.0%
! AGTAATAACTTGCAACCATA+TGG - Chr2:74085320-74085339 MsG0280010736.01.T01:intron 30.0%
! ATTGTGTTTTACTAGGTAGA+TGG - Chr2:74084791-74084810 MsG0280010736.01.T01:intron 30.0%
! ATTTTCTTTACCATTGGAGA+TGG + Chr2:74082578-74082597 None:intergenic 30.0%
! CAAAACTTGTTTCCTAAGTA+AGG + Chr2:74086025-74086044 None:intergenic 30.0%
! CTCCTAAATTGTGTTTTACT+AGG - Chr2:74084784-74084803 MsG0280010736.01.T01:intron 30.0%
! CTTACTTAGGAAACAAGTTT+TGG - Chr2:74086023-74086042 MsG0280010736.01.T01:intron 30.0%
! CTTTGAGGGAAAAATCAAAA+GGG - Chr2:74083633-74083652 MsG0280010736.01.T01:CDS 30.0%
! GAATCAAATATACAGGCTTT+TGG - Chr2:74085831-74085850 MsG0280010736.01.T01:intron 30.0%
! GGAATGTGTTTTATGTGAAT+GGG - Chr2:74083846-74083865 MsG0280010736.01.T01:intron 30.0%
! TTAACCATTTTCAACCCTAA+AGG + Chr2:74084495-74084514 None:intergenic 30.0%
! TTAGTTTGGCAATTCTTAGT+TGG - Chr2:74087756-74087775 MsG0280010736.01.T01:intron 30.0%
! TTCCCTTTTAGATTTGTCTT+CGG - Chr2:74087464-74087483 MsG0280010736.01.T01:intron 30.0%
! TTGAAATAACTACGGATTGA+TGG + Chr2:74085424-74085443 None:intergenic 30.0%
! TTTGATGAAGCAAGTTTTTC+AGG - Chr2:74084025-74084044 MsG0280010736.01.T01:intron 30.0%
!! ATCTAGACATTTTAGCCAAT+TGG - Chr2:74083516-74083535 MsG0280010736.01.T01:CDS 30.0%
!! ATGGATTGTTTTATCCCATT+TGG - Chr2:74083707-74083726 MsG0280010736.01.T01:CDS 30.0%
!! GCTAATTTTGTCCATTTTTG+AGG - Chr2:74083243-74083262 MsG0280010736.01.T01:intron 30.0%
!! TCTAGACATTTTAGCCAATT+GGG - Chr2:74083517-74083536 MsG0280010736.01.T01:CDS 30.0%
!! TGGATTGTTTTATCCCATTT+GGG - Chr2:74083708-74083727 MsG0280010736.01.T01:intron 30.0%
!!! ACAAATTTTTTCTGGGTTTG+TGG - Chr2:74083551-74083570 MsG0280010736.01.T01:CDS 30.0%
!!! CTTTTGATTTTTCCCTCAAA+GGG + Chr2:74083634-74083653 None:intergenic 30.0%
!!! GGTGACTTGTTTTTTGTTTT+TGG - Chr2:74084206-74084225 MsG0280010736.01.T01:CDS 30.0%
!!! GTTAAGGTTAGTTTTGAAGA+AGG - Chr2:74083772-74083791 MsG0280010736.01.T01:intron 30.0%
!!! TCACTTTTTAATCTCCTCAT+GGG + Chr2:74086761-74086780 None:intergenic 30.0%
!!! TGTTTTTTTGACAACCCAAT+TGG + Chr2:74083534-74083553 None:intergenic 30.0%
!!! TTCACTTTTTAATCTCCTCA+TGG + Chr2:74086762-74086781 None:intergenic 30.0%
AAGAGGTGAAGCAAATAAAG+AGG - Chr2:74083140-74083159 MsG0280010736.01.T01:CDS 35.0%
AAGCAAGGCAAAATGGAATA+AGG - Chr2:74085283-74085302 MsG0280010736.01.T01:intron 35.0%
AATCAATTCCCAGCCAAAAA+TGG + Chr2:74086597-74086616 None:intergenic 35.0%
AATGCTCTTCAAATTTCACC+TGG - Chr2:74083998-74084017 MsG0280010736.01.T01:intron 35.0%
AATGTTGAAATCTTTCCTGC+AGG - Chr2:74086981-74087000 MsG0280010736.01.T01:intron 35.0%
ACACAAGCGATAGAAAACAT+AGG + Chr2:74085695-74085714 None:intergenic 35.0%
ACCAAAACGTTAAAGGAAAC+AGG + Chr2:74086269-74086288 None:intergenic 35.0%
ACTAATTTAGTGACCCTTTG+AGG - Chr2:74083618-74083637 MsG0280010736.01.T01:CDS 35.0%
ACTCACTGTTTGTAGAACTT+GGG - Chr2:74083955-74083974 MsG0280010736.01.T01:intron 35.0%
AGAATCCTTCGTATTGAACT+TGG + Chr2:74086877-74086896 None:intergenic 35.0%
AGGGACCAAACTAATAAACT+AGG - Chr2:74084400-74084419 MsG0280010736.01.T01:intron 35.0%
AGTTTGGCAATTCTTAGTTG+GGG - Chr2:74087758-74087777 MsG0280010736.01.T01:intron 35.0%
ATAGAAGAACGAATCATTGG+AGG + Chr2:74085398-74085417 None:intergenic 35.0%
ATTGACCCAAAAAACGTTGT+CGG - Chr2:74084881-74084900 MsG0280010736.01.T01:intron 35.0%
ATTTGCTTCACCTCTTTGTT+TGG + Chr2:74083136-74083155 None:intergenic 35.0%
CAAAAGAAGCAAAACCCAAA+TGG + Chr2:74083725-74083744 None:intergenic 35.0%
CAAAATTTCCACTATGAGGA+GGG - Chr2:74087294-74087313 MsG0280010736.01.T01:intron 35.0%
CAATAAAGGAGTAGTGAGAA+AGG - Chr2:74086111-74086130 MsG0280010736.01.T01:intron 35.0%
CCAAAGATACAAGCTTCATA+TGG + Chr2:74086376-74086395 None:intergenic 35.0%
CCATATGAAGCTTGTATCTT+TGG - Chr2:74086373-74086392 MsG0280010736.01.T01:intron 35.0%
CCTATGTTCTATGACCTAAA+CGG + Chr2:74085887-74085906 None:intergenic 35.0%
CTAATTTAGTGACCCTTTGA+GGG - Chr2:74083619-74083638 MsG0280010736.01.T01:CDS 35.0%
CTAGGAATGAGGAAATATTG+AGG + Chr2:74083327-74083346 None:intergenic 35.0%
CTATGTCAGATAAAATGGTC+TGG + Chr2:74085768-74085787 None:intergenic 35.0%
CTGTGAAGCAAAGAATTAGA+CGG - Chr2:74086165-74086184 MsG0280010736.01.T01:intron 35.0%
GAAGAGTCAGTATGTCAAAT+GGG - Chr2:74085346-74085365 MsG0280010736.01.T01:intron 35.0%
GAGATAATGTTTGCAGGAAA+TGG - Chr2:74083688-74083707 MsG0280010736.01.T01:CDS 35.0%
GATCTCTAATGAACTTGTCA+TGG - Chr2:74086804-74086823 MsG0280010736.01.T01:intron 35.0%
GGTAGAATACAGAGAAAAAG+TGG - Chr2:74084696-74084715 MsG0280010736.01.T01:intron 35.0%
GTAGATGGGAAAAATAGCAT+CGG + Chr2:74085985-74086004 None:intergenic 35.0%
GTTCGTCAAATGCTGAAAAA+GGG - Chr2:74083921-74083940 MsG0280010736.01.T01:intron 35.0%
TAAGGTTAAGAATTTGCGTG+GGG + Chr2:74086215-74086234 None:intergenic 35.0%
TAATATGTCCTTTATGACCG+AGG - Chr2:74085006-74085025 MsG0280010736.01.T01:intron 35.0%
TAGATCTCTCTCTTAGAACT+TGG + Chr2:74083501-74083520 None:intergenic 35.0%
TAGATGGGAAAAATAGCATC+GGG + Chr2:74085984-74086003 None:intergenic 35.0%
TAGTCAGAGTCTAACGTTAT+CGG + Chr2:74085913-74085932 None:intergenic 35.0%
TGAATGGGTGGAATTCTTAT+TGG - Chr2:74083861-74083880 MsG0280010736.01.T01:intron 35.0%
TGAGTGTGATTATGTCTCAT+AGG - Chr2:74084304-74084323 MsG0280010736.01.T01:intron 35.0%
TGGTGAAACCAAAACGTTAA+AGG + Chr2:74086276-74086295 None:intergenic 35.0%
TGTTGTGAGATAATGTTTGC+AGG - Chr2:74083682-74083701 MsG0280010736.01.T01:CDS 35.0%
TTAAGGTCAAAGTTGAGCAT+TGG + Chr2:74082878-74082897 None:intergenic 35.0%
TTCGTCAAATGCTGAAAAAG+GGG - Chr2:74083922-74083941 MsG0280010736.01.T01:intron 35.0%
TTTCTCTCCACAACTGAATA+TGG - Chr2:74086831-74086850 MsG0280010736.01.T01:intron 35.0%
TTTCTTAATCTGCGTGCAAT+TGG - Chr2:74082679-74082698 MsG0280010736.01.T01:three_prime_UTR 35.0%
TTTGAAGAAGGGAGAGAAAT+GGG - Chr2:74083784-74083803 MsG0280010736.01.T01:intron 35.0%
! AAAGGAAGAAAGGTATGCAT+TGG + Chr2:74086191-74086210 None:intergenic 35.0%
! AATAACTTGCAACCATATGG+TGG - Chr2:74085323-74085342 MsG0280010736.01.T01:intron 35.0%
! ACCTGTTTCCTTTAACGTTT+TGG - Chr2:74086265-74086284 MsG0280010736.01.T01:intron 35.0%
! ACTAATATCCGAGTGTTGTT+GGG - Chr2:74085929-74085948 MsG0280010736.01.T01:intron 35.0%
! ATAACTTGCAACCATATGGT+GGG - Chr2:74085324-74085343 MsG0280010736.01.T01:intron 35.0%
! ATGTGTTTTATGTGAATGGG+TGG - Chr2:74083849-74083868 MsG0280010736.01.T01:intron 35.0%
! ATTTTTCCCATCTACAAGAC+TGG - Chr2:74085990-74086009 MsG0280010736.01.T01:intron 35.0%
! CAGACCATTTTATCTGACAT+AGG - Chr2:74085766-74085785 MsG0280010736.01.T01:intron 35.0%
! CCTTTGAGGGAAAAATCAAA+AGG - Chr2:74083632-74083651 MsG0280010736.01.T01:CDS 35.0%
! GAGGGTAAAAGTATGTGTTA+TGG - Chr2:74087312-74087331 MsG0280010736.01.T01:intron 35.0%
! GGGAATGTGTTTTATGTGAA+TGG - Chr2:74083845-74083864 MsG0280010736.01.T01:intron 35.0%
! GTGGAATTCTTATTGGTTGA+TGG - Chr2:74083868-74083887 MsG0280010736.01.T01:intron 35.0%
! TAACCTTTTCTTACTTCTGC+AGG + Chr2:74087378-74087397 None:intergenic 35.0%
! TCATTTCTGTTACCGATTGA+AGG - Chr2:74085116-74085135 MsG0280010736.01.T01:intron 35.0%
! TGCTTCTTTTCACTTCTTTG+AGG - Chr2:74083284-74083303 MsG0280010736.01.T01:intron 35.0%
! TTCATACATCTTTTCTCGGT+CGG + Chr2:74087679-74087698 None:intergenic 35.0%
! TTTTGTCCATCATGAAACCT+GGG - Chr2:74084856-74084875 MsG0280010736.01.T01:intron 35.0%
!! AAAGGGATGGATTAATCAAC+AGG - Chr2:74087878-74087897 MsG0280010736.01.T01:intron 35.0%
!! ATGGGTTTTGTGATGAGAAA+TGG - Chr2:74083802-74083821 MsG0280010736.01.T01:intron 35.0%
!! ATTATATGTTGACTCCCATG+AGG - Chr2:74086744-74086763 MsG0280010736.01.T01:CDS 35.0%
!! CTCATAGTGGAAATTTTGGT+CGG + Chr2:74087292-74087311 None:intergenic 35.0%
!! TGGGTTTTGTGATGAGAAAT+GGG - Chr2:74083803-74083822 MsG0280010736.01.T01:intron 35.0%
!! TGTTCCTTTAGGGTTGAAAA+TGG - Chr2:74084488-74084507 MsG0280010736.01.T01:intron 35.0%
!! TTTGGGTTTTGCTTCTTTTG+TGG - Chr2:74083725-74083744 MsG0280010736.01.T01:intron 35.0%
!! TTTTGAAGAAGGGAGAGAAA+TGG - Chr2:74083783-74083802 MsG0280010736.01.T01:intron 35.0%
!!! AAACACCGACAACGTTTTTT+GGG + Chr2:74084889-74084908 None:intergenic 35.0%
!!! AGGATGCTATTAGTTTTCGA+AGG + Chr2:74086505-74086524 None:intergenic 35.0%
!!! CCTTTTGATTTTTCCCTCAA+AGG + Chr2:74083635-74083654 None:intergenic 35.0%
!!! CTTGTATCTTTGGTTTTCCT+AGG - Chr2:74086383-74086402 MsG0280010736.01.T01:intron 35.0%
!!! TATCAGAGATTTTGGAGTTC+CGG + Chr2:74087158-74087177 None:intergenic 35.0%
!!! TGGTACCTTTTTTACCGTTT+AGG - Chr2:74085870-74085889 MsG0280010736.01.T01:intron 35.0%
AATTATTGGGCATCCAGACT+CGG - Chr2:74087120-74087139 MsG0280010736.01.T01:intron 40.0%
AATTCCCAGCCAAAAATGGT+GGG + Chr2:74086593-74086612 None:intergenic 40.0%
ACACTGTCAAGAACTAGCAT+TGG - Chr2:74082622-74082641 MsG0280010736.01.T01:three_prime_UTR 40.0%
ACAGTCTGCAGAAAACTCAA+AGG + Chr2:74086525-74086544 None:intergenic 40.0%
ACGCCGAAGACAAATCTAAA+AGG + Chr2:74087470-74087489 None:intergenic 40.0%
ACTGAGTTACCATCGTTTCT+GGG - Chr2:74084669-74084688 MsG0280010736.01.T01:intron 40.0%
ACTGTGAGTTTGGCAAATTC+TGG + Chr2:74084619-74084638 None:intergenic 40.0%
AGAACTTGGGCTTTCAATGA+TGG - Chr2:74083968-74083987 MsG0280010736.01.T01:intron 40.0%
AGATGGGAAAAATAGCATCG+GGG + Chr2:74085983-74086002 None:intergenic 40.0%
AGCAATCCTTACCATTGATC+CGG + Chr2:74087207-74087226 None:intergenic 40.0%
AGCATTTGCCAAAATCACAG+TGG + Chr2:74084562-74084581 None:intergenic 40.0%
AGGTGAAGCAAATAAAGAGG+TGG - Chr2:74083143-74083162 MsG0280010736.01.T01:CDS 40.0%
AGTCTGGATGCCCAATAATT+GGG + Chr2:74087120-74087139 None:intergenic 40.0%
ATAAAAGCCTTCATTCCCCA+CGG + Chr2:74087064-74087083 None:intergenic 40.0%
ATAATCCGTATTCGGAGAAC+AGG + Chr2:74087629-74087648 None:intergenic 40.0%
ATAATGGTATCTTGGTGGGA+AGG - Chr2:74084376-74084395 MsG0280010736.01.T01:intron 40.0%
ATAGCAGAAGCAAGGCAAAA+TGG - Chr2:74085276-74085295 MsG0280010736.01.T01:intron 40.0%
ATGCTTTCCCACATTGAAGA+TGG - Chr2:74087579-74087598 MsG0280010736.01.T01:intron 40.0%
ATTACGTCATAGCAGAAGCA+AGG - Chr2:74085268-74085287 MsG0280010736.01.T01:intron 40.0%
CAACCTGCAGAAGTAAGAAA+AGG - Chr2:74087372-74087391 MsG0280010736.01.T01:intron 40.0%
CAAGCTTCATATGGAAGTCA+TGG + Chr2:74086367-74086386 None:intergenic 40.0%
CAATTTCCCAGGTTTCATGA+TGG + Chr2:74084865-74084884 None:intergenic 40.0%
CCAAAATTTCCACTATGAGG+AGG - Chr2:74087293-74087312 MsG0280010736.01.T01:intron 40.0%
CCAATAGATGAGTGAAACAC+GGG - Chr2:74083082-74083101 MsG0280010736.01.T01:CDS 40.0%
CCCAATAGATGAGTGAAACA+CGG - Chr2:74083081-74083100 MsG0280010736.01.T01:CDS 40.0%
CCGTGTTTCACTCATCTATT+GGG + Chr2:74083084-74083103 None:intergenic 40.0%
CCGTTTAGGTCATAGAACAT+AGG - Chr2:74085884-74085903 MsG0280010736.01.T01:intron 40.0%
CGACCAAAATTTCCACTATG+AGG - Chr2:74087290-74087309 MsG0280010736.01.T01:intron 40.0%
CGCCGAAGACAAATCTAAAA+GGG + Chr2:74087469-74087488 None:intergenic 40.0%
CTCATAGGTCTTTGCAAAAG+TGG - Chr2:74084319-74084338 MsG0280010736.01.T01:intron 40.0%
CTGCGTGCAATTGGTTAAAA+CGG - Chr2:74082688-74082707 MsG0280010736.01.T01:three_prime_UTR 40.0%
GACTCACTGTTTGTAGAACT+TGG - Chr2:74083954-74083973 MsG0280010736.01.T01:intron 40.0%
GCTGAAAAAGGGGCTAATAT+GGG - Chr2:74083932-74083951 MsG0280010736.01.T01:intron 40.0%
GGAAGAGTCAGTATGTCAAA+TGG - Chr2:74085345-74085364 MsG0280010736.01.T01:intron 40.0%
GGTGAAGCAAATAAAGAGGT+GGG - Chr2:74083144-74083163 MsG0280010736.01.T01:CDS 40.0%
GGTTCGTCAAATGCTGAAAA+AGG - Chr2:74083920-74083939 MsG0280010736.01.T01:intron 40.0%
GTCAAATCCTTTGGGTCATT+AGG + Chr2:74087090-74087109 None:intergenic 40.0%
GTCTGAATTGACTGTGAGTT+TGG + Chr2:74084629-74084648 None:intergenic 40.0%
GTGCAATTGGTTAAAACGGA+GGG - Chr2:74082692-74082711 MsG0280010736.01.T01:three_prime_UTR 40.0%
GTGTTGAGTAATTGAGTGTG+AGG - Chr2:74083573-74083592 MsG0280010736.01.T01:CDS 40.0%
GTTGTGTTACAGTTTCAGAG+TGG + Chr2:74087356-74087375 None:intergenic 40.0%
GTTTGGCAATTCTTAGTTGG+GGG - Chr2:74087759-74087778 MsG0280010736.01.T01:intron 40.0%
TAAGAATTTGCGTGGGGAAA+AGG + Chr2:74086209-74086228 None:intergenic 40.0%
TAGGTGAACAACTAGGAATG+AGG + Chr2:74083338-74083357 None:intergenic 40.0%
TCTGCTAAGAGAAACAAGTC+TGG - Chr2:74087723-74087742 MsG0280010736.01.T01:intron 40.0%
TGAGTTAGAAGTGAAACCGA+CGG + Chr2:74083214-74083233 None:intergenic 40.0%
TGCTGAAAAAGGGGCTAATA+TGG - Chr2:74083931-74083950 MsG0280010736.01.T01:intron 40.0%
TGGAACTTGAGACCTTACTT+AGG - Chr2:74086010-74086029 MsG0280010736.01.T01:intron 40.0%
TGTCACCAAGTTCAATACGA+AGG - Chr2:74086869-74086888 MsG0280010736.01.T01:intron 40.0%
TTATGGTCCTAATGACCCAA+AGG - Chr2:74087080-74087099 MsG0280010736.01.T01:intron 40.0%
TTATGTGTGAGTGTGTGTTG+TGG - Chr2:74084185-74084204 MsG0280010736.01.T01:CDS 40.0%
TTCATATCTACCCGGATCAA+TGG - Chr2:74087193-74087212 MsG0280010736.01.T01:intron 40.0%
TTCATCGCCATCTTCAATGT+GGG + Chr2:74087589-74087608 None:intergenic 40.0%
! AAAGAGTGCACAAACTGAGT+AGG + Chr2:74084267-74084286 None:intergenic 40.0%
! AAGAGTGCACAAACTGAGTA+GGG + Chr2:74084266-74084285 None:intergenic 40.0%
! ACTAAGGATTGGTATGTGAC+AGG - Chr2:74085239-74085258 MsG0280010736.01.T01:intron 40.0%
! AGAAATGACCCCACCATTTT+TGG - Chr2:74086581-74086600 MsG0280010736.01.T01:intron 40.0%
! CAAGTTCCAGTCTTGTAGAT+GGG + Chr2:74085999-74086018 None:intergenic 40.0%
! CACTCAGTCATGCACATTTT+AGG + Chr2:74084290-74084309 None:intergenic 40.0%
! CTTTTGTCCATCATGAAACC+TGG - Chr2:74084855-74084874 MsG0280010736.01.T01:intron 40.0%
! CTTTTTGCATAGGTTTCACG+AGG - Chr2:74087512-74087531 MsG0280010736.01.T01:intron 40.0%
! GACTAATATCCGAGTGTTGT+TGG - Chr2:74085928-74085947 MsG0280010736.01.T01:intron 40.0%
! GTACAAATTTTCCACACCGT+CGG - Chr2:74083195-74083214 MsG0280010736.01.T01:intron 40.0%
! TACATGTCTTTGGAGGGTTA+AGG - Chr2:74083756-74083775 MsG0280010736.01.T01:intron 40.0%
! TACTTTTACCCTCCTCATAG+TGG + Chr2:74087305-74087324 None:intergenic 40.0%
! TCAAGTTCCAGTCTTGTAGA+TGG + Chr2:74086000-74086019 None:intergenic 40.0%
! TTTTCGAAGGATAGCCTCAA+GGG + Chr2:74086492-74086511 None:intergenic 40.0%
!! CAGGTTTCATGATGGACAAA+AGG + Chr2:74084857-74084876 None:intergenic 40.0%
!! CCTCCTCATAGTGGAAATTT+TGG + Chr2:74087296-74087315 None:intergenic 40.0%
!! GGTAAAAAAGGTACCATCAC+TGG + Chr2:74085866-74085885 None:intergenic 40.0%
!! TGTGGAAGTGTTGAACTTCA+GGG - Chr2:74085056-74085075 MsG0280010736.01.T01:intron 40.0%
!!! GAAACAAGTTTTGGTGTCAC+TGG - Chr2:74086032-74086051 MsG0280010736.01.T01:intron 40.0%
!!! GAAACACCGACAACGTTTTT+TGG + Chr2:74084890-74084909 None:intergenic 40.0%
!!! GTTTTTTGGGTCAATTTCCC+AGG + Chr2:74084876-74084895 None:intergenic 40.0%
AAGAACCATATGCTGACCGT+GGG - Chr2:74087045-74087064 MsG0280010736.01.T01:intron 45.0%
AATGGGACCACAGTTTGTGT+TGG - Chr2:74083820-74083839 MsG0280010736.01.T01:intron 45.0%
ACCATTGGAGATGGATGATG+TGG + Chr2:74082569-74082588 None:intergenic 45.0%
ATCCGGGTAGATATGAACTG+AGG + Chr2:74087190-74087209 None:intergenic 45.0%
ATCTACCCGGATCAATGGTA+AGG - Chr2:74087198-74087217 MsG0280010736.01.T01:intron 45.0%
ATGCAGATTGGGCAAAGCAA+AGG - Chr2:74087860-74087879 MsG0280010736.01.T01:intron 45.0%
ATTATTGGGCATCCAGACTC+GGG - Chr2:74087121-74087140 MsG0280010736.01.T01:intron 45.0%
ATTCCCAGCCAAAAATGGTG+GGG + Chr2:74086592-74086611 None:intergenic 45.0%
ATTCTTAGTTGGGGGAATGG+AGG - Chr2:74087767-74087786 MsG0280010736.01.T01:intron 45.0%
CAATTCCCAGCCAAAAATGG+TGG + Chr2:74086594-74086613 None:intergenic 45.0%
CACCTCAGTTCATATCTACC+CGG - Chr2:74087185-74087204 MsG0280010736.01.T01:intron 45.0%
CCCGTGTTTCACTCATCTAT+TGG + Chr2:74083085-74083104 None:intergenic 45.0%
CGATTGTTCGTCGCGATTTA+AGG - Chr2:74083899-74083918 MsG0280010736.01.T01:intron 45.0%
CGTGCAATTGGTTAAAACGG+AGG - Chr2:74082691-74082710 MsG0280010736.01.T01:three_prime_UTR 45.0%
CTATGTCAACCTGTGTCTCA+GGG + Chr2:74082798-74082817 None:intergenic 45.0%
CTTCATCGCCATCTTCAATG+TGG + Chr2:74087590-74087609 None:intergenic 45.0%
CTTGCTTCATCAAAGTGACC+AGG + Chr2:74084019-74084038 None:intergenic 45.0%
GACCACAGTTTGTGTTGGAT+GGG - Chr2:74083825-74083844 MsG0280010736.01.T01:intron 45.0%
GACCGTCAACCCCAATTATT+GGG - Chr2:74087107-74087126 MsG0280010736.01.T01:intron 45.0%
GACTCGGGTCTGATTATATC+CGG - Chr2:74087136-74087155 MsG0280010736.01.T01:intron 45.0%
GACTGAGTTACCATCGTTTC+TGG - Chr2:74084668-74084687 MsG0280010736.01.T01:intron 45.0%
GAGTCTGGATGCCCAATAAT+TGG + Chr2:74087121-74087140 None:intergenic 45.0%
GAGTGTATAGTGTGGTAGCA+TGG - Chr2:74088049-74088068 MsG0280010736.01.T01:intron 45.0%
GATATAATCAGACCCGAGTC+TGG + Chr2:74087136-74087155 None:intergenic 45.0%
GATTGGTATGTGACAGGCTT+TGG - Chr2:74085245-74085264 MsG0280010736.01.T01:intron 45.0%
GCAATCCTTACCATTGATCC+GGG + Chr2:74087206-74087225 None:intergenic 45.0%
GCAATTCTTAGTTGGGGGAA+TGG - Chr2:74087764-74087783 MsG0280010736.01.T01:intron 45.0%
GGAGTGGATAGAGGAAATGT+CGG - Chr2:74087002-74087021 MsG0280010736.01.T01:intron 45.0%
GGGGAAAGGAGAAAGAGAAA+AGG + Chr2:74085490-74085509 None:intergenic 45.0%
GGTTGACGGTCAAATCCTTT+GGG + Chr2:74087098-74087117 None:intergenic 45.0%
GTCAGTATGTCAAATGGGCA+TGG - Chr2:74085351-74085370 MsG0280010736.01.T01:CDS 45.0%
GTCTGGATGCCCAATAATTG+GGG + Chr2:74087119-74087138 None:intergenic 45.0%
GTCTGTCTGACCAAACAAAG+AGG - Chr2:74083123-74083142 MsG0280010736.01.T01:CDS 45.0%
TCTATGTCAACCTGTGTCTC+AGG + Chr2:74082799-74082818 None:intergenic 45.0%
TGAAATCTTTCCTGCAGGAG+TGG - Chr2:74086986-74087005 MsG0280010736.01.T01:intron 45.0%
TGACCGTCAACCCCAATTAT+TGG - Chr2:74087106-74087125 MsG0280010736.01.T01:intron 45.0%
TGATTATGGAATCGTCCCAG+CGG - Chr2:74087800-74087819 MsG0280010736.01.T01:intron 45.0%
TGCAGATTGGGCAAAGCAAA+GGG - Chr2:74087861-74087880 MsG0280010736.01.T01:intron 45.0%
TGCCCAATAATTGGGGTTGA+CGG + Chr2:74087112-74087131 None:intergenic 45.0%
TTCCCATCCAACACAAACTG+TGG + Chr2:74083830-74083849 None:intergenic 45.0%
TTCTGCAGACTGTCTTGACA+AGG - Chr2:74086532-74086551 MsG0280010736.01.T01:intron 45.0%
TTGGAAGTTGAGACCAGTGA+TGG - Chr2:74085850-74085869 MsG0280010736.01.T01:intron 45.0%
TTGTTTGGTCAGACAGACAG+TGG + Chr2:74083121-74083140 None:intergenic 45.0%
! AAGAGAAACAAGTCTGGAGC+AGG - Chr2:74087729-74087748 MsG0280010736.01.T01:intron 45.0%
! GTGGGGAATGAAGGCTTTTA+TGG - Chr2:74087063-74087082 MsG0280010736.01.T01:intron 45.0%
! GTTTTCGAAGGATAGCCTCA+AGG + Chr2:74086493-74086512 None:intergenic 45.0%
! TTACCATCGTTTCTGGGAAG+TGG - Chr2:74084675-74084694 MsG0280010736.01.T01:intron 45.0%
!! AGGGGTACCGATTTCAATTC+TGG - Chr2:74085075-74085094 MsG0280010736.01.T01:CDS 45.0%
!! CGATGAAGTACTGAAGAAGC+CGG - Chr2:74087602-74087621 MsG0280010736.01.T01:intron 45.0%
!! GTGGAAGTGTTGAACTTCAG+GGG - Chr2:74085057-74085076 MsG0280010736.01.T01:intron 45.0%
!! GTGTGGAAGTGTTGAACTTC+AGG - Chr2:74085055-74085074 MsG0280010736.01.T01:intron 45.0%
!! TACTGACTCTTCCCACCATA+TGG + Chr2:74085338-74085357 None:intergenic 45.0%
!! ATTATAATTGTTTATAATAA+TGG - Chr2:74084360-74084379 MsG0280010736.01.T01:intron 5.0%
AAGAATGCCACTCCCACCAT+TGG + Chr2:74085535-74085554 None:intergenic 50.0%
ACATTTGAAGGGTGGATCGC+AGG + Chr2:74086677-74086696 None:intergenic 50.0%
AGAACCATATGCTGACCGTG+GGG - Chr2:74087046-74087065 MsG0280010736.01.T01:intron 50.0%
AGGCGTGGGGTAAAGAGAAA+GGG + Chr2:74085512-74085531 None:intergenic 50.0%
CAAGAACCATATGCTGACCG+TGG - Chr2:74087044-74087063 MsG0280010736.01.T01:intron 50.0%
CGTTGCATGACTGATCGTTC+CGG - Chr2:74086626-74086645 MsG0280010736.01.T01:intron 50.0%
CTACCACTTCCCAGAAACGA+TGG + Chr2:74084681-74084700 None:intergenic 50.0%
CTCTATGTTTGCAGCCCTTG+AGG - Chr2:74086475-74086494 MsG0280010736.01.T01:intron 50.0%
GAACGATCAGTCATGCAACG+AGG + Chr2:74086626-74086645 None:intergenic 50.0%
GAGAGCTTACCCTCCTTATG+GGG + Chr2:74085961-74085980 None:intergenic 50.0%
GATTGGGCAAAGCAAAGGGA+TGG - Chr2:74087865-74087884 MsG0280010736.01.T01:intron 50.0%
GCCACATCATCCATCTCCAA+TGG - Chr2:74082565-74082584 MsG0280010736.01.T01:three_prime_UTR 50.0%
GGACCACAGTTTGTGTTGGA+TGG - Chr2:74083824-74083843 MsG0280010736.01.T01:intron 50.0%
GGAGAGCTTACCCTCCTTAT+GGG + Chr2:74085962-74085981 None:intergenic 50.0%
GGGTTGACGGTCAAATCCTT+TGG + Chr2:74087099-74087118 None:intergenic 50.0%
GGTAAAGAGAAAGGGGGGAA+AGG + Chr2:74085504-74085523 None:intergenic 50.0%
GGTCGGATACAGTGAAGTTC+TGG + Chr2:74087662-74087681 None:intergenic 50.0%
GTCAAATGGGCATGGCAAGA+GGG - Chr2:74085359-74085378 MsG0280010736.01.T01:CDS 50.0%
TAACCAATGCCCTGAGACAC+AGG - Chr2:74082786-74082805 MsG0280010736.01.T01:exon 50.0%
TAGAAGTGAAACCGACGGTG+TGG + Chr2:74083209-74083228 None:intergenic 50.0%
TCAAATGGGCATGGCAAGAG+GGG - Chr2:74085360-74085379 MsG0280010736.01.T01:CDS 50.0%
TCGCAGGTGAAGGACTTACT+TGG + Chr2:74086661-74086680 None:intergenic 50.0%
TGCGTGGGGAAAAGGAAGAA+AGG + Chr2:74086201-74086220 None:intergenic 50.0%
TGGCAAGCGATCTCTCTCTA+TGG - Chr2:74084716-74084735 MsG0280010736.01.T01:intron 50.0%
TGTCAAATGGGCATGGCAAG+AGG - Chr2:74085358-74085377 MsG0280010736.01.T01:CDS 50.0%
TTTCCTCTATCCACTCCTGC+AGG + Chr2:74086999-74087018 None:intergenic 50.0%
TTTCCTGCAGGAGTGGATAG+AGG - Chr2:74086993-74087012 MsG0280010736.01.T01:intron 50.0%
! ATCCGAGTGTTGTTGGGAAG+AGG - Chr2:74085935-74085954 MsG0280010736.01.T01:intron 50.0%
! GTGTTGATCGACTTTCCGCT+GGG + Chr2:74087818-74087837 None:intergenic 50.0%
! TGTGTTGATCGACTTTCCGC+TGG + Chr2:74087819-74087838 None:intergenic 50.0%
!! ACAGCGTGCCACTGTGATTT+TGG - Chr2:74084551-74084570 MsG0280010736.01.T01:intron 50.0%
!! ACTTACTTGGAGAGTGTCGC+CGG + Chr2:74086648-74086667 None:intergenic 50.0%
!! GAGCATTGGCATGTGTGAAG+TGG + Chr2:74082864-74082883 None:intergenic 50.0%
!! GTGTCTCAGGGCATTGGTTA+AGG + Chr2:74082786-74082805 None:intergenic 50.0%
!!! ATGACCCCACCATTTTTGGC+TGG - Chr2:74086585-74086604 MsG0280010736.01.T01:intron 50.0%
!!! TGACCCCACCATTTTTGGCT+GGG - Chr2:74086586-74086605 MsG0280010736.01.T01:intron 50.0%
AATGCCACTCCCACCATTGG+AGG + Chr2:74085532-74085551 None:intergenic 55.0%
ACAGCAAGATTGCACCGCTG+CGG + Chr2:74086149-74086168 None:intergenic 55.0%
ATGCTGACCGTGGGGAATGA+AGG - Chr2:74087054-74087073 MsG0280010736.01.T01:intron 55.0%
CAACCTGTGTCTCAGGGCAT+TGG + Chr2:74082792-74082811 None:intergenic 55.0%
CAACGACTTGCGCTAGACCT+CGG + Chr2:74085026-74085045 None:intergenic 55.0%
CATTCCCCACGGTCAGCATA+TGG + Chr2:74087053-74087072 None:intergenic 55.0%
CCGGTCCTGTTCTCCGAATA+CGG - Chr2:74087621-74087640 MsG0280010736.01.T01:intron 55.0%
CCGTATTCGGAGAACAGGAC+CGG + Chr2:74087624-74087643 None:intergenic 55.0%
CGTGGGGTAAAGAGAAAGGG+GGG + Chr2:74085509-74085528 None:intergenic 55.0%
CTGGAGCAGGCGCTTTAGTT+TGG - Chr2:74087742-74087761 MsG0280010736.01.T01:intron 55.0%
GAGGCGTGGGGTAAAGAGAA+AGG + Chr2:74085513-74085532 None:intergenic 55.0%
GCGCTAGACCTCGGTCATAA+AGG + Chr2:74085017-74085036 None:intergenic 55.0%
GCGTGGGGTAAAGAGAAAGG+GGG + Chr2:74085510-74085529 None:intergenic 55.0%
GGCCTCTTCCCAACAACACT+CGG + Chr2:74085940-74085959 None:intergenic 55.0%
GGCGTGGGGTAAAGAGAAAG+GGG + Chr2:74085511-74085530 None:intergenic 55.0%
GGGAGAGCTTACCCTCCTTA+TGG + Chr2:74085963-74085982 None:intergenic 55.0%
GGTATCTTGGTGGGAAGGCA+GGG - Chr2:74084381-74084400 MsG0280010736.01.T01:intron 55.0%
TCTTTACCCCACGCCTCCAA+TGG - Chr2:74085516-74085535 MsG0280010736.01.T01:intron 55.0%
TGGTATCTTGGTGGGAAGGC+AGG - Chr2:74084380-74084399 MsG0280010736.01.T01:intron 55.0%
TGTGTTATGGGTATGGGCGC+AGG - Chr2:74087325-74087344 MsG0280010736.01.T01:intron 55.0%
TGTTGGGAAGAGGCCCCATA+AGG - Chr2:74085945-74085964 MsG0280010736.01.T01:intron 55.0%
AGTCGTTGGTGCGCAGTGTG+TGG - Chr2:74085038-74085057 MsG0280010736.01.T01:intron 60.0%
ATGGGCATGGCAAGAGGGGT+AGG - Chr2:74085364-74085383 MsG0280010736.01.T01:CDS 60.0%
CGAGGTCTAGCGCAAGTCGT+TGG - Chr2:74085024-74085043 MsG0280010736.01.T01:intron 60.0%
GAAGGGTGGATCGCAGGTGA+AGG + Chr2:74086671-74086690 None:intergenic 60.0%
GGGAAGAGGCCCCATAAGGA+GGG - Chr2:74085949-74085968 MsG0280010736.01.T01:intron 60.0%
GGGCTGAATCATCACCGCAG+CGG - Chr2:74086132-74086151 MsG0280010736.01.T01:intron 60.0%
TACCCCACGCCTCCAATGGT+GGG - Chr2:74085520-74085539 MsG0280010736.01.T01:intron 60.0%
TGGGAAGAGGCCCCATAAGG+AGG - Chr2:74085948-74085967 MsG0280010736.01.T01:intron 60.0%
TTACCCCACGCCTCCAATGG+TGG - Chr2:74085519-74085538 MsG0280010736.01.T01:intron 60.0%
! ACTCCCACCATTGGAGGCGT+GGG + Chr2:74085526-74085545 None:intergenic 60.0%
CACTCCCACCATTGGAGGCG+TGG + Chr2:74085527-74085546 None:intergenic 65.0%
! CACGCCTCCAATGGTGGGAG+TGG - Chr2:74085525-74085544 MsG0280010736.01.T01:intron 65.0%
! CTCCCACCATTGGAGGCGTG+GGG + Chr2:74085525-74085544 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 74082559 74088170 74082559 ID=MsG0280010736.01;Name=MsG0280010736.01
Chr2 mRNA 74082559 74088170 74082559 ID=MsG0280010736.01.T01;Parent=MsG0280010736.01;Name=MsG0280010736.01.T01;_AED=0.33;_eAED=0.40;_QI=0|0.5|0.28|0.85|0.83|0.85|7|244|382
Chr2 exon 74082559 74083205 74082559 ID=MsG0280010736.01.T01:exon:15585;Parent=MsG0280010736.01.T01
Chr2 exon 74083515 74083726 74083515 ID=MsG0280010736.01.T01:exon:15584;Parent=MsG0280010736.01.T01
Chr2 exon 74084068 74084260 74084068 ID=MsG0280010736.01.T01:exon:15583;Parent=MsG0280010736.01.T01
Chr2 exon 74085069 74085134 74085069 ID=MsG0280010736.01.T01:exon:15582;Parent=MsG0280010736.01.T01
Chr2 exon 74085348 74085468 74085348 ID=MsG0280010736.01.T01:exon:15581;Parent=MsG0280010736.01.T01
Chr2 exon 74086683 74086808 74086683 ID=MsG0280010736.01.T01:exon:15580;Parent=MsG0280010736.01.T01
Chr2 exon 74088143 74088170 74088143 ID=MsG0280010736.01.T01:exon:15579;Parent=MsG0280010736.01.T01
Chr2 CDS 74088143 74088170 74088143 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74086683 74086808 74086683 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74085348 74085468 74085348 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74085069 74085134 74085069 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74084068 74084260 74084068 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74083515 74083726 74083515 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 CDS 74082803 74083205 74082803 ID=MsG0280010736.01.T01:cds;Parent=MsG0280010736.01.T01
Chr2 three_prime_UTR 74082559 74082802 74082559 ID=MsG0280010736.01.T01:three_prime_utr;Parent=MsG0280010736.01.T01
Gene Sequence

>MsG0280010736.01.T01

ATGGATGCCACATCATCCATCTCCAATGGTTCGTCAAATGCTGAAAAAGGGGCTAATATGGGACTCACTGTTTGTAGAACTTGGGCTTTCAATGATGGTCATTATAATGCTCTTCAAATTTCACCTGGTCACTTTGATGAAGCAAGTTTTTCAGGCTTTGGATTACGTCATAGCAGAAGCAAGGCAAAATGGAATAAGGCTGCTCCTTTGCTTAGTAATAACTTGCAACCATATGGTGGGAAGAGTCAGTATGTCAAATGGGCATGGCAAGAGGGATTCCACATGTTGTATGCCTTTAATTGTCATATGATAACTTTAGATTTAATAATACTTTTGTACTGTTTTCGCTCTATGTTTGCAGCCCTTGAGGCTATCCTTCGAAAACTAATAGCATCCTTTGAGTTTTCTGCAGACTGTCTTGACAAGGAAAAATTCTTTCACCGGATTGAATATAGAAATGACCCCACCATTTTTGGCTGGGAATTGATTAATGAGCCTCGTTGCATGACTGATCGTTCCGGCGACACTCTCCAAGAGTGGATAGAGGAAATGTCGGCTTTTGTGAAATTGATTGACAAGAACCATATGCTGACCGTGGGGAATGAAGGCTTTTATGGTCCTAATGACCCAAAGGATTTGACCGTCAACCCCAATTATTGGGCATCCAGACTCGGGTCTGATTATATCCGGAACTCCAAAATCTCTGATATTGATTTCACCTCAGTTCATATCTACCCGGATCAATGGTTTCACGAGGATGAGAAAGCAATTGAAACTCAACTGAAATTTGTCAACAAGTGGATGCTTTCCCACATTGAAGATGGCGATGAAGTACTGAAGAAGCCGGTCCTGTTCTCCGAATACGGATTATCAAAAAAGAACCAGAACTTCACTGTATCCGACCGAGAAAAGATGTATGAAACAATATTAAACATCGTTTACAAATCTGCTAAGAGAAACAAGTCTGGAGCAGGCGCTTTAGTTTGGCAATTCTTAGTTGGGGGAATGGAGGAATATTCTGATGATTATGGAATCGTCCCAGCGGAAAGTCGATCAACACAATCGCTATTTATAAAACAATCATGCAGATTGGGCAAAGCAAAGGGATGGATTAATCAACAGGATGTAAATTTCAAAGCACTTTGTTAG

Protein sequence

>MsG0280010736.01.T01

MDATSSISNGSSNAEKGANMGLTVCRTWAFNDGHYNALQISPGHFDEASFSGFGLRHSRSKAKWNKAAPLLSNNLQPYGGKSQYVKWAWQEGFHMLYAFNCHMITLDLIILLYCFRSMFAALEAILRKLIASFEFSADCLDKEKFFHRIEYRNDPTIFGWELINEPRCMTDRSGDTLQEWIEEMSAFVKLIDKNHMLTVGNEGFYGPNDPKDLTVNPNYWASRLGSDYIRNSKISDIDFTSVHIYPDQWFHEDEKAIETQLKFVNKWMLSHIEDGDEVLKKPVLFSEYGLSKKNQNFTVSDREKMYETILNIVYKSAKRNKSGAGALVWQFLVGGMEEYSDDYGIVPAESRSTQSLFIKQSCRLGKAKGWINQQDVNFKALC*