AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016247.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016247.01.T01 MTR_3g086340 96.446 816 13 2 1 800 1 816 0.0 1623
MsG0380016247.01.T01 MTR_3g086340 93.495 661 27 2 1 645 1 661 0.0 1204
MsG0380016247.01.T01 MTR_3g073040 57.625 800 296 10 1 786 1 771 0.0 894
MsG0380016247.01.T01 MTR_3g073040 57.678 801 293 12 1 786 1 770 0.0 886
MsG0380016247.01.T01 MTR_3g097270 57.283 714 253 14 88 786 69 745 0.0 813
MsG0380016247.01.T01 MTR_5g459350 58.621 754 258 14 55 786 24 745 0.0 810
MsG0380016247.01.T01 MTR_4g101410 53.750 720 312 8 82 786 45 758 0.0 766
MsG0380016247.01.T01 MTR_3g073040 54.914 641 249 7 1 629 1 613 0.0 670
MsG0380016247.01.T01 MTR_4g101410 57.627 531 206 6 271 786 1 527 0.0 618
MsG0380016247.01.T01 MTR_4g064110 32.718 379 225 14 410 772 63 427 2.21e-45 169
MsG0380016247.01.T01 MTR_7g061830 34.054 370 213 13 421 772 75 431 1.25e-44 167
MsG0380016247.01.T01 MTR_4g115490 49.505 101 26 4 406 504 73 150 5.06e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016247.01.T01 AT1G13170 70.683 805 208 8 1 784 1 798 0.0 1174
MsG0380016247.01.T01 AT1G13170 68.886 826 208 9 1 784 1 819 0.0 1161
MsG0380016247.01.T01 AT4G08180 56.611 832 288 14 1 786 1 805 0.0 887
MsG0380016247.01.T01 AT4G08180 56.611 832 288 14 1 786 1 805 0.0 887
MsG0380016247.01.T01 AT4G08180 56.438 831 290 13 1 786 1 804 0.0 885
MsG0380016247.01.T01 AT4G08180 56.077 831 293 13 1 786 1 804 0.0 879
MsG0380016247.01.T01 AT2G31020 54.313 823 288 17 1 786 1 772 0.0 824
MsG0380016247.01.T01 AT4G22540 54.775 712 277 10 80 786 41 712 0.0 778
MsG0380016247.01.T01 AT4G22540 54.775 712 277 10 80 786 41 712 0.0 778
MsG0380016247.01.T01 AT4G12460 53.638 701 277 10 91 786 27 684 0.0 747
MsG0380016247.01.T01 AT4G12460 53.638 701 277 10 91 786 27 684 0.0 747
MsG0380016247.01.T01 AT4G12460 53.561 702 277 11 91 786 27 685 0.0 742
MsG0380016247.01.T01 AT4G12460 52.026 617 249 9 91 703 27 600 0.0 630
MsG0380016247.01.T01 AT4G12460 51.942 618 249 10 91 703 27 601 0.0 625
MsG0380016247.01.T01 AT4G22540 57.170 530 196 6 259 786 1 501 0.0 621
MsG0380016247.01.T01 AT4G22540 57.170 530 196 6 259 786 1 501 0.0 621
MsG0380016247.01.T01 AT4G22540 57.170 530 196 6 259 786 1 501 0.0 621
MsG0380016247.01.T01 AT4G22540 57.170 530 196 6 259 786 1 501 0.0 621
MsG0380016247.01.T01 AT4G12460 55.283 530 201 6 259 786 1 496 0.0 595
MsG0380016247.01.T01 AT4G12460 55.283 530 201 6 259 786 1 496 0.0 595
MsG0380016247.01.T01 AT4G12460 55.283 530 201 6 259 786 1 496 0.0 595
MsG0380016247.01.T01 AT2G31030 66.512 430 122 7 367 786 70 487 0.0 588
MsG0380016247.01.T01 AT4G12460 67.760 366 106 5 423 786 1 356 0.0 537
MsG0380016247.01.T01 AT1G77730 50.962 208 93 2 92 299 54 252 2.80e-61 208
MsG0380016247.01.T01 AT3G09300 34.048 373 213 14 419 772 73 431 3.45e-46 172
MsG0380016247.01.T01 AT5G02100 33.521 355 216 11 413 759 35 377 1.59e-42 160
MsG0380016247.01.T01 AT5G02100 33.428 353 219 10 413 759 62 404 1.62e-42 161
MsG0380016247.01.T01 AT5G59420 32.880 368 222 11 421 773 70 427 2.79e-42 160
MsG0380016247.01.T01 AT5G02100 33.730 252 158 7 413 661 62 307 2.74e-31 125

Find 249 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTGGCTGCGCATTTC+GGG 0.157402 3:+80962460 MsG0380016247.01.T01:three_prime_UTR
GAGAAGGTAGCAATGTTAAT+TGG 0.168502 3:+80961475 MsG0380016247.01.T01:CDS
TTTCTTCTGGCTGCGCATTT+CGG 0.201686 3:+80962459 MsG0380016247.01.T01:three_prime_UTR
ACAGGTTTCTCTTTCTCTTT+TGG 0.206881 3:-80959303 None:intergenic
CCAGAACTTTCCTTTCAAAT+TGG 0.215503 3:-80960657 None:intergenic
GATGGAATCTCTGATATATT+TGG 0.215908 3:+80962283 MsG0380016247.01.T01:CDS
TCAAACTCTCAGTGTCAATT+AGG 0.219163 3:+80955665 MsG0380016247.01.T01:CDS
TGCCTACATACATCCATTTA+AGG 0.224282 3:-80955352 None:intergenic
TGAAATAATGCCTGGTTTAT+TGG 0.266677 3:+80961651 MsG0380016247.01.T01:CDS
ACCTAGTATAATATTGTATA+TGG 0.274460 3:-80960768 None:intergenic
TGTCTCACATCTTCGCATAT+TGG 0.277298 3:+80962488 MsG0380016247.01.T01:three_prime_UTR
CTTTCTTATTATAAGATTCA+TGG 0.279657 3:+80955947 MsG0380016247.01.T01:CDS
AGAAATTTCAATACACTATC+TGG 0.280547 3:-80962441 None:intergenic
TCAATTATTAAAGACAATAT+TGG 0.284186 3:+80959336 MsG0380016247.01.T01:CDS
AAGCGGCTTTCCGTATTTAC+TGG 0.295879 3:+80957354 MsG0380016247.01.T01:CDS
AGGGAAGAGGATGGAAGTTC+TGG 0.296789 3:+80960627 MsG0380016247.01.T01:CDS
AATGTTGTGGTTATTGTTAC+TGG 0.304213 3:-80955252 None:intergenic
GATCAGAGACATTTGGAAAA+TGG 0.308611 3:+80961709 MsG0380016247.01.T01:CDS
GTCTCACATCTTCGCATATT+GGG 0.309566 3:+80962489 MsG0380016247.01.T01:three_prime_UTR
GAGAGGTTGTATCTTGTCTT+GGG 0.311130 3:-80961607 None:intergenic
TTCATCCTTCTTAAACCATC+TGG 0.316774 3:-80962203 None:intergenic
TAGTGTATTGAAATTTCTTC+TGG 0.319453 3:+80962446 MsG0380016247.01.T01:three_prime_UTR
AGTGGTTCATTAAAATAAAC+AGG 0.326599 3:-80959384 None:intergenic
AGAGAGTATAGTGCCTTAAA+TGG 0.329348 3:+80955339 MsG0380016247.01.T01:five_prime_UTR
CCAATTTGAAAGGAAAGTTC+TGG 0.331269 3:+80960657 MsG0380016247.01.T01:CDS
AATATTGGGAAGGATCTTTC+TGG 0.333747 3:+80959351 MsG0380016247.01.T01:CDS
ATCGATACATGGGTGGCTAT+TGG 0.338961 3:+80962236 MsG0380016247.01.T01:CDS
AACCTTTCAATCCTCTGCTT+GGG 0.341547 3:+80960353 MsG0380016247.01.T01:CDS
CTGCTAAGGATAGGAGTGTT+AGG 0.343968 3:+80955993 MsG0380016247.01.T01:CDS
GCAGAAACATGTTATGTTGT+TGG 0.352447 3:+80957635 MsG0380016247.01.T01:CDS
GTCATAGGATCATAACCTTT+GGG 0.354076 3:-80961547 None:intergenic
GGTGTAGCTGGTAGTGTGGC+GGG 0.356766 3:+80955854 MsG0380016247.01.T01:CDS
CAATTATTAAAGACAATATT+GGG 0.362443 3:+80959337 MsG0380016247.01.T01:CDS
CATAGTTCATTAAAATTGAA+TGG 0.364592 3:+80955201 MsG0380016247.01.T01:five_prime_UTR
GACATTAGTAGTATAGTGTA+AGG 0.366040 3:-80955078 None:intergenic
TACAGTTGTTGTTATTGTTA+TGG 0.370310 3:-80955399 None:intergenic
TGTCATAGGATCATAACCTT+TGG 0.385591 3:-80961548 None:intergenic
TATGCCTTCCTGCGACAATC+TGG 0.385880 3:-80957532 None:intergenic
TCGATACATGGGTGGCTATT+GGG 0.387651 3:+80962237 MsG0380016247.01.T01:CDS
AATAATGCAGCTTCTGTCAT+AGG 0.390176 3:-80961562 None:intergenic
CAAACTCTCAGTGTCAATTA+GGG 0.396095 3:+80955666 MsG0380016247.01.T01:CDS
TAACCTTTGGGCTTTGTAGT+TGG 0.397123 3:-80961535 None:intergenic
ATAATCTCTATCATATATAC+TGG 0.397734 3:-80959193 None:intergenic
ACCAGGCATTATTTCATTCA+AGG 0.402595 3:-80961644 None:intergenic
GAAGCTGACTATCCAGATAA+AGG 0.405366 3:+80960385 MsG0380016247.01.T01:CDS
TGTTCTCACCCTACAGTTTG+AGG 0.407398 3:+80960709 MsG0380016247.01.T01:CDS
AGAAGGTAGCAATGTTAATT+GGG 0.408388 3:+80961476 MsG0380016247.01.T01:CDS
AAAATTTATTGTGACCACTA+TGG 0.408418 3:+80960791 MsG0380016247.01.T01:CDS
GTCGAAACTACGATATCTTC+TGG 0.412128 3:-80957495 None:intergenic
AGGCAAGAGAAAAGAACAAT+TGG 0.412285 3:+80962260 MsG0380016247.01.T01:CDS
TTGAATGGTGGTGGTGTAGC+TGG 0.413586 3:+80955842 MsG0380016247.01.T01:CDS
CGGTCTCGATCGATCGAAAC+AGG 0.413905 3:-80955620 None:intergenic
GAGACCAGATCAGAGACATT+TGG 0.425840 3:+80961702 MsG0380016247.01.T01:CDS
GTTGGACACCTTAAAACAAC+TGG 0.428345 3:+80957653 MsG0380016247.01.T01:CDS
ATTGTTATGGCAGGCTATAA+AGG 0.430453 3:-80955386 None:intergenic
ACAGGAGCAATGCAGCATAA+TGG 0.437596 3:-80955602 None:intergenic
GAGGTCGAGGTGGTTTGTGC+TGG 0.440865 3:+80955913 MsG0380016247.01.T01:CDS
ATTCTACCTGATGTGGATTA+CGG 0.441592 3:-80960883 None:intergenic
TTCATCGTTAGCAGGGGATT+CGG 0.445059 3:+80955748 MsG0380016247.01.T01:CDS
TCGATAGGAAGCACTTCTTA+AGG 0.446117 3:-80959148 None:intergenic
CAATTTGAAAGGAAAGTTCT+GGG 0.446597 3:+80960658 MsG0380016247.01.T01:CDS
AGGTTTGCACTGTCGACCTT+CGG 0.447760 3:-80960335 None:intergenic
AGTTGATAGAGCATTGGAAT+GGG 0.452108 3:+80959452 MsG0380016247.01.T01:CDS
GTTGTTGTTATTGTTATGGC+AGG 0.457606 3:-80955395 None:intergenic
ATCGCTGCTTGTCAGAGCCC+TGG 0.457953 3:-80957463 None:intergenic
TTCTATTCAGTTAGATCCTG+TGG 0.458107 3:+80960685 MsG0380016247.01.T01:CDS
TTTGTTCAAGACAACAGAAC+TGG 0.458145 3:+80961451 MsG0380016247.01.T01:CDS
ATAATTGACCACAAGCCAAC+AGG 0.459158 3:-80959321 None:intergenic
TTATTATAAGATTCATGGAC+CGG 0.459192 3:+80955952 MsG0380016247.01.T01:CDS
CTGTACAAGTGGGTGAATTA+CGG 0.459389 3:+80955881 MsG0380016247.01.T01:CDS
AGAGAGGTTGTATCTTGTCT+TGG 0.459636 3:-80961608 None:intergenic
CTTTGGTGAGATACATTTGA+AGG 0.460035 3:+80956117 MsG0380016247.01.T01:CDS
ATGCAAATGCAGAGAAACTA+AGG 0.461375 3:+80961743 MsG0380016247.01.T01:CDS
AAACCTTTCAATCCTCTGCT+TGG 0.461808 3:+80960352 MsG0380016247.01.T01:CDS
GCTATCCTTATGTCAAAAGA+AGG 0.462480 3:+80959265 MsG0380016247.01.T01:CDS
AGCTGCATTATTGTGGGAAA+AGG 0.463826 3:+80961573 MsG0380016247.01.T01:CDS
TCGGAAGTCTCATATCTTCA+AGG 0.464893 3:+80957594 MsG0380016247.01.T01:CDS
GATAAATTGTAAATTAACAT+AGG 0.470126 3:-80962530 None:intergenic
AGTTTGTGAAGAAGGCGAAT+TGG 0.471857 3:+80956038 MsG0380016247.01.T01:CDS
ACGGTAAGGGGTGGAGGTCG+AGG 0.472773 3:+80955900 MsG0380016247.01.T01:CDS
ACTCATGATTCATCGTTAGC+AGG 0.473903 3:+80955740 MsG0380016247.01.T01:CDS
TGAATTACGGTAAGGGGTGG+AGG 0.476607 3:+80955894 MsG0380016247.01.T01:CDS
ACTTACAACCTACGTCCAAA+TGG 0.478390 3:-80962397 None:intergenic
ATTCTCCATGATGGTTCGCA+TGG 0.479835 3:+80959216 MsG0380016247.01.T01:CDS
ACTAAGCAATGCAAGCCCTT+TGG 0.482324 3:+80956100 MsG0380016247.01.T01:CDS
AGGTGGTTTGTGCTGGAAGA+TGG 0.484001 3:+80955920 MsG0380016247.01.T01:CDS
AATCGAGGTAATGGAGTAGT+TGG 0.485035 3:+80956067 MsG0380016247.01.T01:CDS
TCCTTGAATGAAATAATGCC+TGG 0.486395 3:+80961643 MsG0380016247.01.T01:CDS
TCATATATCAATCAGGTCCA+TGG 0.488165 3:+80961427 MsG0380016247.01.T01:intron
AGAGATTATATTCTCCATGA+TGG 0.491772 3:+80959207 MsG0380016247.01.T01:CDS
GACAGAAGCTGCATTATTGT+GGG 0.492765 3:+80961567 MsG0380016247.01.T01:CDS
GGACTCATCAAGATCTTATC+CGG 0.494187 3:-80955971 None:intergenic
GTCGGCGAAGTTTGTGAAGA+AGG 0.494815 3:+80956030 MsG0380016247.01.T01:CDS
ATGATTCAAACCCGCGGAAG+AGG 0.496646 3:-80955777 None:intergenic
CTCATGATTCATCGTTAGCA+GGG 0.496650 3:+80955741 MsG0380016247.01.T01:CDS
GTAGAGTTATACAGAGTGGC+AGG 0.497967 3:+80955300 MsG0380016247.01.T01:five_prime_UTR
TTCTATTCTGTTATGTCGGA+AGG 0.501177 3:+80959015 MsG0380016247.01.T01:CDS
TAGCAATGTTAATTGGGAAG+TGG 0.502076 3:+80961482 MsG0380016247.01.T01:CDS
CGTGATTCGAAGGTGTTGAA+TGG 0.502852 3:+80955827 MsG0380016247.01.T01:CDS
CATAGACCGTAATCCACATC+AGG 0.510334 3:+80960877 MsG0380016247.01.T01:CDS
TGGAACGTGAATCGAGGTAA+TGG 0.510875 3:+80956058 MsG0380016247.01.T01:CDS
AGCATTGGAATGGGGAAAGC+AGG 0.511126 3:+80959461 MsG0380016247.01.T01:CDS
AGCAATGTTAATTGGGAAGT+GGG 0.511602 3:+80961483 MsG0380016247.01.T01:CDS
AGAGTATAACCGTCGCGGAT+CGG 0.513015 3:+80955552 MsG0380016247.01.T01:five_prime_UTR
CAAGTGGGTGAATTACGGTA+AGG 0.513340 3:+80955886 MsG0380016247.01.T01:CDS
AGATGGTTCTTATCGATACA+TGG 0.513483 3:+80962225 MsG0380016247.01.T01:CDS
AGCGGCTTTCCGTATTTACT+GGG 0.514457 3:+80957355 MsG0380016247.01.T01:CDS
TCGCTGCTTGTCAGAGCCCT+GGG 0.516479 3:-80957462 None:intergenic
TGACAGAAGCTGCATTATTG+TGG 0.520354 3:+80961566 MsG0380016247.01.T01:CDS
CGAGGTAATGGAGTAGTTGG+AGG 0.520545 3:+80956070 MsG0380016247.01.T01:CDS
TTCAAATGTATCTCACCAAA+GGG 0.520600 3:-80956115 None:intergenic
TGGTGTAGCTGGTAGTGTGG+CGG 0.522017 3:+80955853 MsG0380016247.01.T01:CDS
CAAACCCATGCGAACCATCA+TGG 0.522192 3:-80959221 None:intergenic
TCCGGCTATGCGTCCACCGA+AGG 0.523101 3:+80960319 MsG0380016247.01.T01:CDS
GAGTTTGACTTGGACACCAC+CGG 0.524959 3:-80955650 None:intergenic
CTAACACTCCTATCCTTAGC+AGG 0.525096 3:-80955992 None:intergenic
GCTTGAACAGTTACAGAGAC+AGG 0.526015 3:+80961765 MsG0380016247.01.T01:CDS
AAAGAGGATGGCAGCCCAGA+TGG 0.527746 3:+80962188 MsG0380016247.01.T01:CDS
GGGAAGAGGATGGAAGTTCT+GGG 0.528074 3:+80960628 MsG0380016247.01.T01:CDS
TCATCCTTCTTAAACCATCT+GGG 0.529279 3:-80962202 None:intergenic
CTGCGAGTCTATTATGCTCT+CGG 0.531114 3:+80957575 MsG0380016247.01.T01:CDS
ATACACAAGTGGTCAAATCA+AGG 0.535212 3:-80958987 None:intergenic
ACCTTCGGTGGACGCATAGC+CGG 0.535688 3:-80960320 None:intergenic
TTTCACCATCCTCAAACTGT+AGG 0.535836 3:-80960718 None:intergenic
TAGTTGATAGAGCATTGGAA+TGG 0.536176 3:+80959451 MsG0380016247.01.T01:CDS
TGGATTCATTGTTCACTCAT+CGG 0.536803 3:-80955582 None:intergenic
AAGCAATGTATTATGTACTC+GGG 0.540009 3:+80961509 MsG0380016247.01.T01:CDS
ACCTTTCAATCCTCTGCTTG+GGG 0.540289 3:+80960354 MsG0380016247.01.T01:CDS
TTCTCCATGATGGTTCGCAT+GGG 0.540956 3:+80959217 MsG0380016247.01.T01:CDS
TCCATATACAATATTATACT+AGG 0.541406 3:+80960767 MsG0380016247.01.T01:CDS
TCTTTCACTGTGGAGAGAAG+TGG 0.541473 3:-80955118 None:intergenic
ATTCCAATGCTCTATCAACT+AGG 0.544260 3:-80959449 None:intergenic
CTGTTTCGATCGATCGAGAC+CGG 0.544792 3:+80955621 MsG0380016247.01.T01:CDS
CAGTGACAAGCAACAACCAT+TGG 0.546451 3:-80960602 None:intergenic
GAAGCAATGTATTATGTACT+CGG 0.546711 3:+80961508 MsG0380016247.01.T01:CDS
TGTACCTTCTCTACTTCGAT+AGG 0.547021 3:-80959163 None:intergenic
CTATGGTACCATGCACATCA+AGG 0.547735 3:+80960808 MsG0380016247.01.T01:CDS
TCGAAGGTGTTGAATGGTGG+TGG 0.549430 3:+80955833 MsG0380016247.01.T01:CDS
TGCCTTAAATGGATGTATGT+AGG 0.550146 3:+80955350 MsG0380016247.01.T01:five_prime_UTR
TGCTAAGGATAGGAGTGTTA+GGG 0.550632 3:+80955994 MsG0380016247.01.T01:CDS
GGTCTCAACCTTGAGTCAGT+TGG 0.551175 3:-80961685 None:intergenic
GGCAAGAGAAAAGAACAATT+GGG 0.551650 3:+80962261 MsG0380016247.01.T01:CDS
ATACACAATTCTACCTGATG+TGG 0.553182 3:-80960890 None:intergenic
CTCAACCTTGAGTCAGTTGG+AGG 0.553760 3:-80961682 None:intergenic
CTATATGTCCATTTGGACGT+AGG 0.554353 3:+80962389 MsG0380016247.01.T01:three_prime_UTR
GTAGATAATGAAAGTCAAGA+TGG 0.554991 3:+80959057 MsG0380016247.01.T01:CDS
TTCGGTGAAATCCTCTTCCG+CGG 0.557647 3:+80955766 MsG0380016247.01.T01:CDS
AGGAAATTGCGAAGGGAGAG+AGG 0.558262 3:-80961624 None:intergenic
AAGTGGGTGAATTACGGTAA+GGG 0.558842 3:+80955887 MsG0380016247.01.T01:CDS
TGGGCAGACTCCAATTTGAA+AGG 0.559546 3:+80960647 MsG0380016247.01.T01:CDS
GGTAATGGAGTAGTTGGAGG+TGG 0.559553 3:+80956073 MsG0380016247.01.T01:CDS
TGGTTTAAGAAGGATGAAGA+TGG 0.560153 3:+80962208 MsG0380016247.01.T01:CDS
TGATGAGTCCTGCTAAGGAT+AGG 0.561501 3:+80955984 MsG0380016247.01.T01:CDS
TTCATTCAAGGAAATTGCGA+AGG 0.562873 3:-80961632 None:intergenic
GCAAGAAAGATGCAAGAAAG+AGG 0.565562 3:+80962172 MsG0380016247.01.T01:CDS
TATCGAAGTAGAGAAGGTAC+AGG 0.567775 3:+80959165 MsG0380016247.01.T01:CDS
TCCCCAAGCAGAGGATTGAA+AGG 0.567797 3:-80960355 None:intergenic
CATATATCAATCAGGTCCAT+GGG 0.568149 3:+80961428 MsG0380016247.01.T01:intron
GATAGGAGTGTTAGGGTGAT+CGG 0.568158 3:+80956001 MsG0380016247.01.T01:CDS
CTATCCTTATGTCAAAAGAA+GGG 0.568464 3:+80959266 MsG0380016247.01.T01:CDS
GATCTTGATGAGTCCTGCTA+AGG 0.569317 3:+80955979 MsG0380016247.01.T01:CDS
AGTGGCGAAGGAAGAGAGAG+AGG 0.569731 3:-80955100 None:intergenic
AAACCTAGTTGATAGAGCAT+TGG 0.570994 3:+80959446 MsG0380016247.01.T01:CDS
TTTCTTTCTTTCTTTCACTG+TGG 0.572189 3:-80955128 None:intergenic
TCATTCAAGGAAATTGCGAA+GGG 0.572598 3:-80961631 None:intergenic
GCTGAAACAGATGATGAAGA+TGG 0.574131 3:+80959087 MsG0380016247.01.T01:CDS
AAGGAAAACCAGTGTTCAGT+AGG 0.575906 3:-80962347 None:intergenic
TCCGCTGCCCTTGATGTGCA+TGG 0.576078 3:-80960816 None:intergenic
AGAGAAAAGAACAATTGGGA+TGG 0.577912 3:+80962265 MsG0380016247.01.T01:CDS
TTTGCACTGTCGACCTTCGG+TGG 0.578036 3:-80960332 None:intergenic
AAATGGATGTATGTAGGCAG+TGG 0.581226 3:+80955356 MsG0380016247.01.T01:five_prime_UTR
TAGGGTGATCGGTGAGGAGT+CGG 0.581596 3:+80956012 MsG0380016247.01.T01:CDS
TTGACACTGAGAGTTTGACT+TGG 0.582949 3:-80955660 None:intergenic
GCTGCGATCCAGATTGTCGC+AGG 0.583112 3:+80957524 MsG0380016247.01.T01:CDS
CGATCCAGATTGTCGCAGGA+AGG 0.583509 3:+80957528 MsG0380016247.01.T01:CDS
CTCACCCTACAGTTTGAGGA+TGG 0.584327 3:+80960713 MsG0380016247.01.T01:CDS
TCGGTGAAATCCTCTTCCGC+GGG 0.584385 3:+80955767 MsG0380016247.01.T01:CDS
TTCACCATCCTCAAACTGTA+GGG 0.585643 3:-80960717 None:intergenic
CATTAGTAGTATAGTGTAAG+GGG 0.586064 3:-80955076 None:intergenic
AGATTTCTATTCTGTTATGT+CGG 0.586785 3:+80959011 MsG0380016247.01.T01:CDS
CTTCAAATGTATCTCACCAA+AGG 0.591601 3:-80956116 None:intergenic
AGACAACAGAACTGGAGAGA+AGG 0.592664 3:+80961459 MsG0380016247.01.T01:CDS
TGTTGTCTTGAACAAACCCA+TGG 0.592809 3:-80961444 None:intergenic
TATTAAAGACAATATTGGGA+AGG 0.594490 3:+80959341 MsG0380016247.01.T01:CDS
GCTTGTCACTGTGAGGGAAG+AGG 0.594775 3:+80960614 MsG0380016247.01.T01:CDS
TCTATTCAGTTAGATCCTGT+GGG 0.597031 3:+80960686 MsG0380016247.01.T01:CDS
AGTTGCCTCCAACTGACTCA+AGG 0.597649 3:+80961677 MsG0380016247.01.T01:CDS
AAGAGAAACCTGTTGGCTTG+TGG 0.599183 3:+80959313 MsG0380016247.01.T01:CDS
TGGCGGGGATACTGTACAAG+TGG 0.600268 3:+80955870 MsG0380016247.01.T01:CDS
GGAAAATCTCCGATCCGCGA+CGG 0.600283 3:-80955561 None:intergenic
ACATTAGTAGTATAGTGTAA+GGG 0.603339 3:-80955077 None:intergenic
GGGTGAATTACGGTAAGGGG+TGG 0.603460 3:+80955891 MsG0380016247.01.T01:CDS
GCTTCCTATCGAAGTAGAGA+AGG 0.604750 3:+80959159 MsG0380016247.01.T01:CDS
GCAGCCCAGATGGTTTAAGA+AGG 0.605725 3:+80962198 MsG0380016247.01.T01:CDS
GAAAGATGCAAGAAAGAGGA+TGG 0.608320 3:+80962176 MsG0380016247.01.T01:CDS
CTAACGTGCGCACTTATGCA+CGG 0.609614 3:-80955049 None:intergenic
GAGTGTTAGGGTGATCGGTG+AGG 0.613789 3:+80956006 MsG0380016247.01.T01:CDS
CGATCGAGACCGGAGTACTC+CGG 0.614542 3:+80955631 MsG0380016247.01.T01:CDS
TGGACACCACCGGAGTACTC+CGG 0.615450 3:-80955640 None:intergenic
AGGATGGTGAAACATTTCAG+TGG 0.616673 3:+80960729 MsG0380016247.01.T01:CDS
GATTGTATCCTACTGAACAC+TGG 0.617725 3:+80962339 MsG0380016247.01.T01:exon
ACAATCTCTTCAGAACATGA+AGG 0.618331 3:-80962322 None:intergenic
CTGCAGGGCTTCAATCCACA+TGG 0.618507 3:-80957421 None:intergenic
AGAGGTTGTATCTTGTCTTG+GGG 0.618783 3:-80961606 None:intergenic
GTTGATAGAGCATTGGAATG+GGG 0.620034 3:+80959453 MsG0380016247.01.T01:CDS
GCAGGTTAGTCATCATCCAA+TGG 0.621822 3:+80960586 MsG0380016247.01.T01:intron
TAACGTGCGCACTTATGCAC+GGG 0.622139 3:-80955048 None:intergenic
TATGGTACCATGCACATCAA+GGG 0.624068 3:+80960809 MsG0380016247.01.T01:CDS
AATTTGAAAGGAAAGTTCTG+GGG 0.624314 3:+80960659 MsG0380016247.01.T01:CDS
GTCACTGTGAGGGAAGAGGA+TGG 0.624810 3:+80960618 MsG0380016247.01.T01:CDS
CAACTAGGTTTGAGTACTCG+AGG 0.625286 3:-80959434 None:intergenic
AAAGAGAAAGAGAAACCTGT+TGG 0.625727 3:+80959306 MsG0380016247.01.T01:CDS
ATCTCTGATATATTTGGACA+AGG 0.626371 3:+80962289 MsG0380016247.01.T01:CDS
ATAGAAATCTGATACACAAG+TGG 0.628094 3:-80958998 None:intergenic
GAATCATGATGAAGATGATG+TGG 0.628842 3:+80955793 MsG0380016247.01.T01:CDS
GATGGTTCTTATCGATACAT+GGG 0.630124 3:+80962226 MsG0380016247.01.T01:CDS
TGAAACATTTCAGTGGAGCA+AGG 0.632886 3:+80960736 MsG0380016247.01.T01:CDS
GTTGTTGCTTGTCACTGTGA+GGG 0.633322 3:+80960608 MsG0380016247.01.T01:CDS
GTGTAGCTGGTAGTGTGGCG+GGG 0.633835 3:+80955855 MsG0380016247.01.T01:CDS
GTAAGGGGTGGAGGTCGAGG+TGG 0.634093 3:+80955903 MsG0380016247.01.T01:CDS
ACCATGCACATCAAGGGCAG+CGG 0.635881 3:+80960815 MsG0380016247.01.T01:CDS
GGCAACTTCACCAATAAACC+AGG 0.640370 3:-80961661 None:intergenic
TCATAAGTCTCCCCAAGCAG+AGG 0.640828 3:-80960364 None:intergenic
TCATGATTCATCGTTAGCAG+GGG 0.643169 3:+80955742 MsG0380016247.01.T01:CDS
GCGAATTGGAACGTGAATCG+AGG 0.648599 3:+80956052 MsG0380016247.01.T01:CDS
TGGTGGTGTAGCTGGTAGTG+TGG 0.649309 3:+80955850 MsG0380016247.01.T01:CDS
ATTTGAAAGGAAAGTTCTGG+GGG 0.649854 3:+80960660 MsG0380016247.01.T01:CDS
TTCATCATGATTCAAACCCG+CGG 0.649867 3:-80955783 None:intergenic
ACTGTGGAGAGAAGTGGCGA+AGG 0.652598 3:-80955112 None:intergenic
GATTCGAAGGTGTTGAATGG+TGG 0.655086 3:+80955830 MsG0380016247.01.T01:CDS
GGACACCTTAAAACAACTGG+AGG 0.657233 3:+80957656 MsG0380016247.01.T01:CDS
GGTTGTTGCTTGTCACTGTG+AGG 0.658525 3:+80960607 MsG0380016247.01.T01:CDS
GAATGAAGTTCGTGATTCGA+AGG 0.658790 3:+80955817 MsG0380016247.01.T01:CDS
AGTGGGTGAATTACGGTAAG+GGG 0.660910 3:+80955888 MsG0380016247.01.T01:CDS
ATACATGGGTGGCTATTGGG+AGG 0.673085 3:+80962240 MsG0380016247.01.T01:CDS
TCAGCAAGTCTGATGACAAG+CGG 0.674731 3:+80957337 MsG0380016247.01.T01:CDS
TGTAGGGTGAGAACACCCAC+AGG 0.676850 3:-80960701 None:intergenic
GTTAGATTCATCGATCAGAA+CGG 0.677473 3:+80955688 MsG0380016247.01.T01:CDS
GGCGGGGATACTGTACAAGT+GGG 0.678286 3:+80955871 MsG0380016247.01.T01:CDS
TGGTTCGCATGGGTTTGAGA+TGG 0.680779 3:+80959227 MsG0380016247.01.T01:CDS
AGTAGTAGAGTTATACAGAG+TGG 0.685854 3:+80955296 MsG0380016247.01.T01:five_prime_UTR
TGATGTGCATGGTACCATAG+TGG 0.687505 3:-80960805 None:intergenic
GGTTCTTATCGATACATGGG+TGG 0.688046 3:+80962229 MsG0380016247.01.T01:CDS
AGCAATGTATTATGTACTCG+GGG 0.689080 3:+80961510 MsG0380016247.01.T01:CDS
GATCCAACTACAAAGCCCAA+AGG 0.692121 3:+80961532 MsG0380016247.01.T01:CDS
TCGAGACCGGAGTACTCCGG+TGG 0.699586 3:+80955634 MsG0380016247.01.T01:CDS
TGATCAGAGTATAACCGTCG+CGG 0.707639 3:+80955547 MsG0380016247.01.T01:five_prime_UTR
GTGGTTCATTAAAATAAACA+GGG 0.715478 3:-80959383 None:intergenic
CTAGAGAAGACAGAGCCATG+TGG 0.716663 3:+80957406 MsG0380016247.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTTGATTCAATTATTA+TGG + Chr3:80961342-80961361 MsG0380016247.01.T01:intron 10.0%
!!! ATAAAATGTTTTACAATTTT+GGG + Chr3:80956612-80956631 MsG0380016247.01.T01:intron 10.0%
!!! TATTTTATTTGTAAACAAAT+GGG - Chr3:80961977-80961996 None:intergenic 10.0%
!!! TTATTTTATTTGTAAACAAA+TGG - Chr3:80961978-80961997 None:intergenic 10.0%
!! AATATATTGGGAAAATAATT+TGG - Chr3:80959723-80959742 None:intergenic 15.0%
!! ATAAAAGCAACTATTTAAAA+TGG - Chr3:80958868-80958887 None:intergenic 15.0%
!! CAATTATTAAAGACAATATT+GGG + Chr3:80959337-80959356 MsG0380016247.01.T01:CDS 15.0%
!! GATAAATTGTAAATTAACAT+AGG - Chr3:80962533-80962552 None:intergenic 15.0%
!! TATTATGAATCAGAATATAA+TGG - Chr3:80957714-80957733 None:intergenic 15.0%
!! TCAATTATTAAAGACAATAT+TGG + Chr3:80959336-80959355 MsG0380016247.01.T01:CDS 15.0%
!! TTGATTCATATTCATAATTT+AGG + Chr3:80962150-80962169 MsG0380016247.01.T01:intron 15.0%
!!! AAATGGTAGATTTTTTTTTT+GGG + Chr3:80956642-80956661 MsG0380016247.01.T01:intron 15.0%
!!! AAATTTAAGATTTCATTTCA+CGG - Chr3:80961251-80961270 None:intergenic 15.0%
!!! ATTTTAATCATATATCAATC+AGG + Chr3:80961420-80961439 MsG0380016247.01.T01:intron 15.0%
!!! CTATCATATTTTTTGTAATT+AGG - Chr3:80956574-80956593 None:intergenic 15.0%
!!! GATAAAATGTTTTACAATTT+TGG + Chr3:80956611-80956630 MsG0380016247.01.T01:intron 15.0%
!!! TAAAATAATTAGGAGTATTT+TGG + Chr3:80958279-80958298 MsG0380016247.01.T01:intron 15.0%
!!! TAAGTTTATTGATAATCAAA+GGG - Chr3:80960943-80960962 None:intergenic 15.0%
!!! TTAAGAGAAAATCAAAATTT+TGG - Chr3:80958641-80958660 None:intergenic 15.0%
!!! TTAAGTTTATTGATAATCAA+AGG - Chr3:80960944-80960963 None:intergenic 15.0%
!! AAAAAAAAAAAACACACTCA+TGG - Chr3:80957214-80957233 None:intergenic 20.0%
!! AAAAATTTAACTCCTTTATC+TGG - Chr3:80960400-80960419 None:intergenic 20.0%
!! AAAAGATAATACAAAGAAGA+GGG - Chr3:80956779-80956798 None:intergenic 20.0%
!! ACAAAAGTGGAAAATATATT+GGG - Chr3:80959735-80959754 None:intergenic 20.0%
!! ACCTAGTATAATATTGTATA+TGG - Chr3:80960771-80960790 None:intergenic 20.0%
!! ATAATCTCTATCATATATAC+TGG - Chr3:80959196-80959215 None:intergenic 20.0%
!! ATGTAAACATGAACTTTATT+TGG + Chr3:80956476-80956495 MsG0380016247.01.T01:intron 20.0%
!! CAAACAAACATAATTAGATT+TGG - Chr3:80957298-80957317 None:intergenic 20.0%
!! CAGTAATAATATCAATACAA+TGG - Chr3:80958409-80958428 None:intergenic 20.0%
!! CATAGTTCATTAAAATTGAA+TGG + Chr3:80955201-80955220 MsG0380016247.01.T01:five_prime_UTR 20.0%
!! CTTTCTTATTATAAGATTCA+TGG + Chr3:80955947-80955966 MsG0380016247.01.T01:CDS 20.0%
!! GGAAAGTTTACATTTAAAAA+CGG - Chr3:80957252-80957271 None:intergenic 20.0%
!! GTTAAAAATAGAACATCAAT+AGG - Chr3:80961068-80961087 None:intergenic 20.0%
!! GTTTCGACAAATAATATAAA+GGG - Chr3:80960992-80961011 None:intergenic 20.0%
!! TAAAAGATAATACAAAGAAG+AGG - Chr3:80956780-80956799 None:intergenic 20.0%
!! TACAAAAAATATGATAGTTC+AGG + Chr3:80956577-80956596 MsG0380016247.01.T01:intron 20.0%
!! TCCATATACAATATTATACT+AGG + Chr3:80960767-80960786 MsG0380016247.01.T01:CDS 20.0%
!! TCTTAAAAAATTAATGCAGA+CGG + Chr3:80958655-80958674 MsG0380016247.01.T01:intron 20.0%
!! TGAAAATTTGAAGAAAAATC+TGG - Chr3:80960437-80960456 None:intergenic 20.0%
!! TGTTGATATGATATGTTTAA+TGG + Chr3:80958538-80958557 MsG0380016247.01.T01:intron 20.0%
!! TGTTTCGACAAATAATATAA+AGG - Chr3:80960993-80961012 None:intergenic 20.0%
!! TTTAGTCAACATGTAATTAA+AGG + Chr3:80956547-80956566 MsG0380016247.01.T01:intron 20.0%
!! TTTCGACAAATAATATAAAG+GGG - Chr3:80960991-80961010 None:intergenic 20.0%
!!! AACATTACTTTTCACTATTT+AGG - Chr3:80958050-80958069 None:intergenic 20.0%
!!! ACATTACTTTTCACTATTTA+GGG - Chr3:80958049-80958068 None:intergenic 20.0%
!!! AGATTTTTCTTCAAATTTTC+AGG + Chr3:80960436-80960455 MsG0380016247.01.T01:intron 20.0%
!!! AGTTAAATTTTTTTCTGAGA+AGG + Chr3:80960408-80960427 MsG0380016247.01.T01:CDS 20.0%
!!! ATGCATTTTAATAAATGTTG+TGG - Chr3:80955268-80955287 None:intergenic 20.0%
!!! CATTCAATTTTAATGAACTA+TGG - Chr3:80955203-80955222 None:intergenic 20.0%
!!! GAAATGGTAGATTTTTTTTT+TGG + Chr3:80956641-80956660 MsG0380016247.01.T01:intron 20.0%
!!! TAGAATTTGTATTCCTTTTA+TGG + Chr3:80961280-80961299 MsG0380016247.01.T01:intron 20.0%
!!! TCTTTGTATTATCTTTTAGT+TGG + Chr3:80956782-80956801 MsG0380016247.01.T01:intron 20.0%
!!! TGTAGATTTAAAATACTTCT+GGG + Chr3:80960194-80960213 MsG0380016247.01.T01:intron 20.0%
!!! TTAAATAGTTGCTTTTATTG+TGG + Chr3:80958870-80958889 MsG0380016247.01.T01:intron 20.0%
!!! TTGTAGATTTAAAATACTTC+TGG + Chr3:80960193-80960212 MsG0380016247.01.T01:intron 20.0%
!!! TTTTAATATTAATGTCAGTC+TGG + Chr3:80959949-80959968 MsG0380016247.01.T01:intron 20.0%
!!! TTTTTGTCGAAATATTTACT+AGG + Chr3:80961907-80961926 MsG0380016247.01.T01:intron 20.0%
!!! TTTTTTCCTATTTCTTTTCT+AGG + Chr3:80961848-80961867 MsG0380016247.01.T01:intron 20.0%
! AAAAAATAGCACAGATTTGA+TGG - Chr3:80959699-80959718 None:intergenic 25.0%
! AAAATTTATTGTGACCACTA+TGG + Chr3:80960791-80960810 MsG0380016247.01.T01:CDS 25.0%
! AACCATTTATAATACAAGCA+AGG - Chr3:80956750-80956769 None:intergenic 25.0%
! AAGACAAAAGATATAGTTCA+AGG - Chr3:80958800-80958819 None:intergenic 25.0%
! AATAAGATTCACTCATTGTT+GGG + Chr3:80960067-80960086 MsG0380016247.01.T01:intron 25.0%
! AATATGTTCGGTTAAACTTA+AGG + Chr3:80959565-80959584 MsG0380016247.01.T01:intron 25.0%
! ACAAATTTAATACAGCTATC+AGG - Chr3:80958180-80958199 None:intergenic 25.0%
! ACATTAGTAGTATAGTGTAA+GGG - Chr3:80955080-80955099 None:intergenic 25.0%
! AGAAATAGTTATGACTTATG+AGG + Chr3:80957140-80957159 MsG0380016247.01.T01:intron 25.0%
! AGAAATTTCAATACACTATC+TGG - Chr3:80962444-80962463 None:intergenic 25.0%
! AGATTTCTATTCTGTTATGT+CGG + Chr3:80959011-80959030 MsG0380016247.01.T01:CDS 25.0%
! AGGAATTTAGTAAACTATGT+TGG - Chr3:80961048-80961067 None:intergenic 25.0%
! AGTATTGTTTGCTTACTTAT+TGG + Chr3:80958242-80958261 MsG0380016247.01.T01:intron 25.0%
! AGTGGTTCATTAAAATAAAC+AGG - Chr3:80959387-80959406 None:intergenic 25.0%
! ATATGTATGAAGTGCAATAA+TGG + Chr3:80956334-80956353 MsG0380016247.01.T01:intron 25.0%
! ATCTAATTATGTTTGTTTGC+AGG + Chr3:80957299-80957318 MsG0380016247.01.T01:intron 25.0%
! ATGTTTACATGCAAATACAA+AGG - Chr3:80956466-80956485 None:intergenic 25.0%
! ATTTCAAATACATCACTACT+TGG - Chr3:80956996-80957015 None:intergenic 25.0%
! CAACATATACAGAATCATAA+TGG - Chr3:80958582-80958601 None:intergenic 25.0%
! GACAAAAGTGGAAAATATAT+TGG - Chr3:80959736-80959755 None:intergenic 25.0%
! GATATTAGCATCTATAAAAC+TGG - Chr3:80959853-80959872 None:intergenic 25.0%
! GGAATTTAGTAAACTATGTT+GGG - Chr3:80961047-80961066 None:intergenic 25.0%
! GGTTTACTAAAAATTGACTA+CGG - Chr3:80956518-80956537 None:intergenic 25.0%
! GTGGTTCATTAAAATAAACA+GGG - Chr3:80959386-80959405 None:intergenic 25.0%
! TAAGCAAACAATACTATGAA+GGG - Chr3:80958237-80958256 None:intergenic 25.0%
! TAGTGTATTGAAATTTCTTC+TGG + Chr3:80962446-80962465 MsG0380016247.01.T01:three_prime_UTR 25.0%
! TATGTATGAAGTGCAATAAT+GGG + Chr3:80956335-80956354 MsG0380016247.01.T01:intron 25.0%
! TATTAAAGACAATATTGGGA+AGG + Chr3:80959341-80959360 MsG0380016247.01.T01:CDS 25.0%
! TTATTATAAGATTCATGGAC+CGG + Chr3:80955952-80955971 MsG0380016247.01.T01:CDS 25.0%
! TTGTGTTAAATGAATGATCT+GGG + Chr3:80957059-80957078 MsG0380016247.01.T01:intron 25.0%
! TTTGTGTTAAATGAATGATC+TGG + Chr3:80957058-80957077 MsG0380016247.01.T01:intron 25.0%
!! AAATGTTTTACAATTTTGGG+AGG + Chr3:80956615-80956634 MsG0380016247.01.T01:intron 25.0%
!! AAGAACTTCATCTTTTAACA+AGG - Chr3:80958613-80958632 None:intergenic 25.0%
!! ATGCAGTAGAAAATTTTAAG+CGG + Chr3:80958316-80958335 MsG0380016247.01.T01:intron 25.0%
!! ATGTTGACTAAATTGACTAA+CGG - Chr3:80956539-80956558 None:intergenic 25.0%
!! GATTATTGATAACCTAATGT+TGG + Chr3:80957871-80957890 MsG0380016247.01.T01:intron 25.0%
!! GTTCATGTAAAAGTGATTTT+GGG + Chr3:80956274-80956293 MsG0380016247.01.T01:intron 25.0%
!! TACAGTTGTTGTTATTGTTA+TGG - Chr3:80955402-80955421 None:intergenic 25.0%
!! TGTTCATGTAAAAGTGATTT+TGG + Chr3:80956273-80956292 MsG0380016247.01.T01:intron 25.0%
!!! AGGAAGTATATTTTAATCCA+TGG - Chr3:80960005-80960024 None:intergenic 25.0%
!!! AGTATTTACTGATTCAGTAA+TGG - Chr3:80958519-80958538 None:intergenic 25.0%
!!! GTAGATTTTTTTTTTGGGAA+AGG + Chr3:80956647-80956666 MsG0380016247.01.T01:intron 25.0%
!!! TTAATGGGTTTTACTGTAAA+TGG + Chr3:80960246-80960265 MsG0380016247.01.T01:intron 25.0%
!!! TTGTATTATCTTTTAGTTGG+TGG + Chr3:80956785-80956804 MsG0380016247.01.T01:intron 25.0%
!!! TTGTTTTGAAGTTTCTATGT+TGG + Chr3:80958944-80958963 MsG0380016247.01.T01:intron 25.0%
AAAAAAACACGAGACAAAAG+TGG - Chr3:80959748-80959767 None:intergenic 30.0%
AAAGCAATTCATTAGAGAGA+GGG - Chr3:80959808-80959827 None:intergenic 30.0%
AACTGTATCATCTTCAGAAA+AGG - Chr3:80961954-80961973 None:intergenic 30.0%
AAGCAATGTATTATGTACTC+GGG + Chr3:80961509-80961528 MsG0380016247.01.T01:CDS 30.0%
AATATCATCTAACAAGAAGC+TGG + Chr3:80960561-80960580 MsG0380016247.01.T01:intron 30.0%
AATGTTGTGGTTATTGTTAC+TGG - Chr3:80955255-80955274 None:intergenic 30.0%
AATTCGTCCATCTAGTATTA+GGG + Chr3:80959673-80959692 MsG0380016247.01.T01:intron 30.0%
AATTTGAAAGGAAAGTTCTG+GGG + Chr3:80960659-80960678 MsG0380016247.01.T01:CDS 30.0%
ACGTCGAATAATAAATGCAA+GGG - Chr3:80962002-80962021 None:intergenic 30.0%
ACTGTATCATCTTCAGAAAA+GGG - Chr3:80961953-80961972 None:intergenic 30.0%
AGAAGGTAGCAATGTTAATT+GGG + Chr3:80961476-80961495 MsG0380016247.01.T01:CDS 30.0%
AGAATATGAGTAAACAAGCA+AGG - Chr3:80957033-80957052 None:intergenic 30.0%
AGAGATTATATTCTCCATGA+TGG + Chr3:80959207-80959226 MsG0380016247.01.T01:CDS 30.0%
ATAAGACAACTGAAACAGTA+GGG + Chr3:80960222-80960241 MsG0380016247.01.T01:intron 30.0%
ATAATTAGATTTGGCACTCA+CGG - Chr3:80957289-80957308 None:intergenic 30.0%
ATAGAAATCTGATACACAAG+TGG - Chr3:80959001-80959020 None:intergenic 30.0%
ATCAATACAATGGTTGACAT+AGG - Chr3:80958399-80958418 None:intergenic 30.0%
ATCTCTGATATATTTGGACA+AGG + Chr3:80962289-80962308 MsG0380016247.01.T01:CDS 30.0%
ATCTGGGTTGTTGAAATATT+GGG + Chr3:80957075-80957094 MsG0380016247.01.T01:intron 30.0%
ATGACAAAATGCAAGTGTAA+AGG - Chr3:80957179-80957198 None:intergenic 30.0%
ATTAGATAGATAGATGTCAG+TGG + Chr3:80960170-80960189 MsG0380016247.01.T01:intron 30.0%
CAATAAGATTCACTCATTGT+TGG + Chr3:80960066-80960085 MsG0380016247.01.T01:intron 30.0%
CAATTTGAAAGGAAAGTTCT+GGG + Chr3:80960658-80960677 MsG0380016247.01.T01:CDS 30.0%
CACAAAATAGCATAAAGCTT+AGG - Chr3:80962090-80962109 None:intergenic 30.0%
CATAATATGCATTTCTGTTG+TGG + Chr3:80957727-80957746 MsG0380016247.01.T01:intron 30.0%
CATTAGTAGTATAGTGTAAG+GGG - Chr3:80955079-80955098 None:intergenic 30.0%
CTATCCTTATGTCAAAAGAA+GGG + Chr3:80959266-80959285 MsG0380016247.01.T01:CDS 30.0%
CTATTATCCAAACATGTTGT+AGG + Chr3:80956307-80956326 MsG0380016247.01.T01:intron 30.0%
GAAGCAATGTATTATGTACT+CGG + Chr3:80961508-80961527 MsG0380016247.01.T01:CDS 30.0%
GAATTTCCTAAAACACTAGA+AGG - Chr3:80957943-80957962 None:intergenic 30.0%
GACATTAGTAGTATAGTGTA+AGG - Chr3:80955081-80955100 None:intergenic 30.0%
GATGGAATCTCTGATATATT+TGG + Chr3:80962283-80962302 MsG0380016247.01.T01:CDS 30.0%
GGATGGTTATAACAAGATAA+TGG + Chr3:80957748-80957767 MsG0380016247.01.T01:intron 30.0%
GGTTTCTTGCTAGAAAAAAA+GGG + Chr3:80956721-80956740 MsG0380016247.01.T01:intron 30.0%
GTAAGCAAACAATACTATGA+AGG - Chr3:80958238-80958257 None:intergenic 30.0%
GTAGAATTGTGTATACAACT+TGG + Chr3:80960899-80960918 MsG0380016247.01.T01:intron 30.0%
GTAGATAATGAAAGTCAAGA+TGG + Chr3:80959057-80959076 MsG0380016247.01.T01:CDS 30.0%
GTCAAGGTAGATAATATGTT+CGG + Chr3:80959553-80959572 MsG0380016247.01.T01:intron 30.0%
GTCCTTGCTTGTATTATAAA+TGG + Chr3:80956745-80956764 MsG0380016247.01.T01:intron 30.0%
GTTTCTTGCTAGAAAAAAAG+GGG + Chr3:80956722-80956741 MsG0380016247.01.T01:intron 30.0%
TAAAAACTCAACTCCAAGAA+AGG - Chr3:80960151-80960170 None:intergenic 30.0%
TAAAATACATACTCTCTCTG+TGG + Chr3:80956944-80956963 MsG0380016247.01.T01:intron 30.0%
TAAAGCAGTGTTTGTTTGAT+TGG + Chr3:80961099-80961118 MsG0380016247.01.T01:intron 30.0%
TAATTCGTCCATCTAGTATT+AGG + Chr3:80959672-80959691 MsG0380016247.01.T01:intron 30.0%
TACATTGACAATTACAACAG+CGG - Chr3:80961227-80961246 None:intergenic 30.0%
TACTGTAGTAGATGAAACAA+AGG + Chr3:80958697-80958716 MsG0380016247.01.T01:intron 30.0%
TATATGACCTACAACATGTT+TGG - Chr3:80956317-80956336 None:intergenic 30.0%
TCAATACAATGGTTGACATA+GGG - Chr3:80958398-80958417 None:intergenic 30.0%
TCGTCTCATTTATTTGTTCT+GGG + Chr3:80961390-80961409 MsG0380016247.01.T01:intron 30.0%
TGAAATAATGCCTGGTTTAT+TGG + Chr3:80961651-80961670 MsG0380016247.01.T01:CDS 30.0%
TGATTCTGTATATGTTGTGT+CGG + Chr3:80958585-80958604 MsG0380016247.01.T01:intron 30.0%
TGGTTTCTTGCTAGAAAAAA+AGG + Chr3:80956720-80956739 MsG0380016247.01.T01:intron 30.0%
TTAGGAAATTCAAGTGTGAA+AGG + Chr3:80957952-80957971 MsG0380016247.01.T01:intron 30.0%
TTCAAATGTATCTCACCAAA+GGG - Chr3:80956118-80956137 None:intergenic 30.0%
TTGAAGTTATCTCTTGAAAG+TGG + Chr3:80956700-80956719 MsG0380016247.01.T01:intron 30.0%
TTTACAACATGTTGAACAAG+TGG - Chr3:80959640-80959659 None:intergenic 30.0%
TTTCTTGCTAGAAAAAAAGG+GGG + Chr3:80956723-80956742 MsG0380016247.01.T01:intron 30.0%
TTTCTTTCTTTCTTTCACTG+TGG - Chr3:80955131-80955150 None:intergenic 30.0%
! AAATATGATAGTTCAGGTTC+AGG + Chr3:80956583-80956602 MsG0380016247.01.T01:intron 30.0%
! AATATGATAGTTCAGGTTCA+GGG + Chr3:80956584-80956603 MsG0380016247.01.T01:intron 30.0%
! AGTTTTTGTCCCAGTAAATA+CGG - Chr3:80957367-80957386 None:intergenic 30.0%
! GACATCAATTACAGCTATTT+TGG - Chr3:80960527-80960546 None:intergenic 30.0%
! TAAAGACCGTCTCTTTTTAT+AGG - Chr3:80958344-80958363 None:intergenic 30.0%
! TCAGAGTTAGTAAAGTTTTG+AGG - Chr3:80955164-80955183 None:intergenic 30.0%
! TGCAGTAGAAAATTTTAAGC+GGG + Chr3:80958317-80958336 MsG0380016247.01.T01:intron 30.0%
! TTATCCCTTCTTTTGACATA+AGG - Chr3:80959273-80959292 None:intergenic 30.0%
! TTTTAACGAGACATGAGTAT+TGG - Chr3:80962555-80962574 None:intergenic 30.0%
!! AATACTAGATGCTGATTCAT+AGG + Chr3:80956154-80956173 MsG0380016247.01.T01:intron 30.0%
!! ATACTAGATGCTGATTCATA+GGG + Chr3:80956155-80956174 MsG0380016247.01.T01:intron 30.0%
!! ATGTAAAAGTGATTTTGGGT+TGG + Chr3:80956278-80956297 MsG0380016247.01.T01:intron 30.0%
!! CATAACTATTTCTACAGATG+TGG - Chr3:80957133-80957152 None:intergenic 30.0%
!! CATGTTGTAAAGTATTGTTC+TGG + Chr3:80959649-80959668 MsG0380016247.01.T01:intron 30.0%
!! CTATTTTGGATTCAATGGAT+AGG - Chr3:80960513-80960532 None:intergenic 30.0%
!! GTTTTTGCTATATGTCCATT+TGG + Chr3:80962382-80962401 MsG0380016247.01.T01:three_prime_UTR 30.0%
!! TACAGCTATTTTGGATTCAA+TGG - Chr3:80960518-80960537 None:intergenic 30.0%
!! TGCTTCATAAAGAGTATTGT+AGG + Chr3:80958000-80958019 MsG0380016247.01.T01:intron 30.0%
!! TTACTTTTCACTATTTAGGG+AGG - Chr3:80958046-80958065 None:intergenic 30.0%
!! TTTTAAAAGCATGATCTCCT+AGG + Chr3:80959522-80959541 MsG0380016247.01.T01:intron 30.0%
!!! TTTTGAAGTTTCTATGTTGG+TGG + Chr3:80958947-80958966 MsG0380016247.01.T01:intron 30.0%
AAACTGGCAAATCTTGACAA+TGG - Chr3:80959837-80959856 None:intergenic 35.0%
AAAGAGAAAGAGAAACCTGT+TGG + Chr3:80959306-80959325 MsG0380016247.01.T01:CDS 35.0%
AATAATGCAGCTTCTGTCAT+AGG - Chr3:80961565-80961584 None:intergenic 35.0%
AATATTGGGAAGGATCTTTC+TGG + Chr3:80959351-80959370 MsG0380016247.01.T01:CDS 35.0%
ACAAAAATGCCAGTTTAAGG+GGG - Chr3:80961894-80961913 None:intergenic 35.0%
ACAATCTCTTCAGAACATGA+AGG - Chr3:80962325-80962344 None:intergenic 35.0%
ACCAGGCATTATTTCATTCA+AGG - Chr3:80961647-80961666 None:intergenic 35.0%
ACTATGTTGGGAGATAAAGT+AGG - Chr3:80961035-80961054 None:intergenic 35.0%
ACTCAGATGAATTTCAACCA+TGG + Chr3:80959985-80960004 MsG0380016247.01.T01:intron 35.0%
ACTGAAACAGTAGGGATTAA+TGG + Chr3:80960230-80960249 MsG0380016247.01.T01:intron 35.0%
AGAGAAAAGAACAATTGGGA+TGG + Chr3:80962265-80962284 MsG0380016247.01.T01:CDS 35.0%
AGATGGTTCTTATCGATACA+TGG + Chr3:80962225-80962244 MsG0380016247.01.T01:CDS 35.0%
AGCAATGTATTATGTACTCG+GGG + Chr3:80961510-80961529 MsG0380016247.01.T01:CDS 35.0%
AGCAATGTTAATTGGGAAGT+GGG + Chr3:80961483-80961502 MsG0380016247.01.T01:CDS 35.0%
AGGCAAGAGAAAAGAACAAT+TGG + Chr3:80962260-80962279 MsG0380016247.01.T01:CDS 35.0%
AGTAGTAGAGTTATACAGAG+TGG + Chr3:80955296-80955315 MsG0380016247.01.T01:five_prime_UTR 35.0%
ATAACCTAATGTTGGAAGCA+TGG + Chr3:80957879-80957898 MsG0380016247.01.T01:intron 35.0%
ATACACAAGTGGTCAAATCA+AGG - Chr3:80958990-80959009 None:intergenic 35.0%
ATACACAATTCTACCTGATG+TGG - Chr3:80960893-80960912 None:intergenic 35.0%
ATATGCATTTCTGTTGTGGA+TGG + Chr3:80957731-80957750 MsG0380016247.01.T01:intron 35.0%
ATCCAAACACACAGATTTGA+AGG - Chr3:80961817-80961836 None:intergenic 35.0%
ATGATAGTAAATCACCCAAG+AGG - Chr3:80962040-80962059 None:intergenic 35.0%
ATGCAAATGCAGAGAAACTA+AGG + Chr3:80961743-80961762 MsG0380016247.01.T01:CDS 35.0%
ATTCCAATGCTCTATCAACT+AGG - Chr3:80959452-80959471 None:intergenic 35.0%
ATTGTTATGGCAGGCTATAA+AGG - Chr3:80955389-80955408 None:intergenic 35.0%
CAAACTCTCAGTGTCAATTA+GGG + Chr3:80955666-80955685 MsG0380016247.01.T01:CDS 35.0%
CAAGGGAATAGAAGATATAG+TGG + Chr3:80958740-80958759 MsG0380016247.01.T01:intron 35.0%
CAGCAACCTAGAAAAGAAAT+AGG - Chr3:80961857-80961876 None:intergenic 35.0%
CATATATCAATCAGGTCCAT+GGG + Chr3:80961428-80961447 MsG0380016247.01.T01:intron 35.0%
CCAATTTGAAAGGAAAGTTC+TGG + Chr3:80960657-80960676 MsG0380016247.01.T01:CDS 35.0%
CCAGAACTTTCCTTTCAAAT+TGG - Chr3:80960660-80960679 None:intergenic 35.0%
CGACAAAAATGCCAGTTTAA+GGG - Chr3:80961896-80961915 None:intergenic 35.0%
CTATGTTGGGAGATAAAGTA+GGG - Chr3:80961034-80961053 None:intergenic 35.0%
CTGAAACAGTAGGGATTAAT+GGG + Chr3:80960231-80960250 MsG0380016247.01.T01:intron 35.0%
CTGTATCATCTTCAGAAAAG+GGG - Chr3:80961952-80961971 None:intergenic 35.0%
CTTCAAATGTATCTCACCAA+AGG - Chr3:80956119-80956138 None:intergenic 35.0%
CTTTGGTGAGATACATTTGA+AGG + Chr3:80956117-80956136 MsG0380016247.01.T01:CDS 35.0%
GAAAGCAATTCATTAGAGAG+AGG - Chr3:80959809-80959828 None:intergenic 35.0%
GAATCATGATGAAGATGATG+TGG + Chr3:80955793-80955812 MsG0380016247.01.T01:CDS 35.0%
GACAAAAATGCCAGTTTAAG+GGG - Chr3:80961895-80961914 None:intergenic 35.0%
GACGTCGAATAATAAATGCA+AGG - Chr3:80962003-80962022 None:intergenic 35.0%
GAGAAGGTAGCAATGTTAAT+TGG + Chr3:80961475-80961494 MsG0380016247.01.T01:CDS 35.0%
GATAAGACAACTGAAACAGT+AGG + Chr3:80960221-80960240 MsG0380016247.01.T01:intron 35.0%
GATAATACAAAGAAGAGGGT+TGG - Chr3:80956775-80956794 None:intergenic 35.0%
GATCAGAGACATTTGGAAAA+TGG + Chr3:80961709-80961728 MsG0380016247.01.T01:CDS 35.0%
GATCTGGGTTGTTGAAATAT+TGG + Chr3:80957074-80957093 MsG0380016247.01.T01:intron 35.0%
GATGCAAGTATGGAAGATTT+AGG + Chr3:80956669-80956688 MsG0380016247.01.T01:intron 35.0%
GATGGTTCTTATCGATACAT+GGG + Chr3:80962226-80962245 MsG0380016247.01.T01:CDS 35.0%
GCAGAAACATGTTATGTTGT+TGG + Chr3:80957635-80957654 MsG0380016247.01.T01:CDS 35.0%
GCTATCCTTATGTCAAAAGA+AGG + Chr3:80959265-80959284 MsG0380016247.01.T01:CDS 35.0%
GGCAAGAGAAAAGAACAATT+GGG + Chr3:80962261-80962280 MsG0380016247.01.T01:CDS 35.0%
GTCATAGGATCATAACCTTT+GGG - Chr3:80961550-80961569 None:intergenic 35.0%
GTCGTCTCATTTATTTGTTC+TGG + Chr3:80961389-80961408 MsG0380016247.01.T01:intron 35.0%
GTTAGATTCATCGATCAGAA+CGG + Chr3:80955688-80955707 MsG0380016247.01.T01:CDS 35.0%
TAATTAGATTTGGCACTCAC+GGG - Chr3:80957288-80957307 None:intergenic 35.0%
TACCTTGACAAAATGAACCT+AGG - Chr3:80959542-80959561 None:intergenic 35.0%
TAGCAATGTTAATTGGGAAG+TGG + Chr3:80961482-80961501 MsG0380016247.01.T01:CDS 35.0%
TATGAGTAAACAAGCAAGGA+TGG - Chr3:80957029-80957048 None:intergenic 35.0%
TATGTTGGGAGATAAAGTAG+GGG - Chr3:80961033-80961052 None:intergenic 35.0%
TCAAACTCTCAGTGTCAATT+AGG + Chr3:80955665-80955684 MsG0380016247.01.T01:CDS 35.0%
TCAATGAAGTCCTACGTTTA+GGG - Chr3:80958134-80958153 None:intergenic 35.0%
TCATATATCAATCAGGTCCA+TGG + Chr3:80961427-80961446 MsG0380016247.01.T01:intron 35.0%
TCATCCTTCTTAAACCATCT+GGG - Chr3:80962205-80962224 None:intergenic 35.0%
TCATTCAAGGAAATTGCGAA+GGG - Chr3:80961634-80961653 None:intergenic 35.0%
TCCTTGAATGAAATAATGCC+TGG + Chr3:80961643-80961662 MsG0380016247.01.T01:CDS 35.0%
TCGACAAAAATGCCAGTTTA+AGG - Chr3:80961897-80961916 None:intergenic 35.0%
TCTATTCAGTTAGATCCTGT+GGG + Chr3:80960686-80960705 MsG0380016247.01.T01:CDS 35.0%
TGATAGTAAATCACCCAAGA+GGG - Chr3:80962039-80962058 None:intergenic 35.0%
TGCCTACATACATCCATTTA+AGG - Chr3:80955355-80955374 None:intergenic 35.0%
TGCCTTAAATGGATGTATGT+AGG + Chr3:80955350-80955369 MsG0380016247.01.T01:five_prime_UTR 35.0%
TGGATTCATTGTTCACTCAT+CGG - Chr3:80955585-80955604 None:intergenic 35.0%
TGGTTTAAGAAGGATGAAGA+TGG + Chr3:80962208-80962227 MsG0380016247.01.T01:CDS 35.0%
TGTATCATCTTCAGAAAAGG+GGG - Chr3:80961951-80961970 None:intergenic 35.0%
TGTCATAGGATCATAACCTT+TGG - Chr3:80961551-80961570 None:intergenic 35.0%
TGTTAGGGTTAGACTTTGTA+AGG + Chr3:80961309-80961328 MsG0380016247.01.T01:intron 35.0%
TTCATCCTTCTTAAACCATC+TGG - Chr3:80962206-80962225 None:intergenic 35.0%
TTCATTCAAGGAAATTGCGA+AGG - Chr3:80961635-80961654 None:intergenic 35.0%
TTCCCTTTCTTAACACAACT+CGG + Chr3:80957687-80957706 MsG0380016247.01.T01:intron 35.0%
TTCTATTCAGTTAGATCCTG+TGG + Chr3:80960685-80960704 MsG0380016247.01.T01:CDS 35.0%
TTCTATTCTGTTATGTCGGA+AGG + Chr3:80959015-80959034 MsG0380016247.01.T01:CDS 35.0%
TTCTTTCGTGAGACATTTCA+TGG + Chr3:80958069-80958088 MsG0380016247.01.T01:intron 35.0%
TTGAAATCTTAAGCCAGACT+AGG - Chr3:80957841-80957860 None:intergenic 35.0%
TTTAAGGGGGAAAAGAAAAC+TGG - Chr3:80961881-80961900 None:intergenic 35.0%
TTTGTTCAAGACAACAGAAC+TGG + Chr3:80961451-80961470 MsG0380016247.01.T01:CDS 35.0%
! AATGAGACGACGCAAAATTT+TGG - Chr3:80961380-80961399 None:intergenic 35.0%
! ACAGGTTTCTCTTTCTCTTT+TGG - Chr3:80959306-80959325 None:intergenic 35.0%
! AGAGAGTATAGTGCCTTAAA+TGG + Chr3:80955339-80955358 MsG0380016247.01.T01:five_prime_UTR 35.0%
! ATTCTACCTGATGTGGATTA+CGG - Chr3:80960886-80960905 None:intergenic 35.0%
! ATTTGAAAGGAAAGTTCTGG+GGG + Chr3:80960660-80960679 MsG0380016247.01.T01:CDS 35.0%
! CTTTTATGGTTGAGCTGTTA+GGG + Chr3:80961294-80961313 MsG0380016247.01.T01:intron 35.0%
! GTTGTTGTTATTGTTATGGC+AGG - Chr3:80955398-80955417 None:intergenic 35.0%
! GTTTTACTGTAAATGGTGCA+GGG + Chr3:80960253-80960272 MsG0380016247.01.T01:intron 35.0%
! TGCAAAAGATCTTTTTCCCA+GGG + Chr3:80957446-80957465 MsG0380016247.01.T01:CDS 35.0%
! TTTTACTGTAAATGGTGCAG+GGG + Chr3:80960254-80960273 MsG0380016247.01.T01:intron 35.0%
! TTTTCCAAATGTCTCTGATC+TGG - Chr3:80961709-80961728 None:intergenic 35.0%
! TTTTCTTTTCCCCCTTAAAC+TGG + Chr3:80961882-80961901 MsG0380016247.01.T01:intron 35.0%
!! AAACCTAGTTGATAGAGCAT+TGG + Chr3:80959446-80959465 MsG0380016247.01.T01:CDS 35.0%
!! AAGATAATGGTTTTCTGACC+TGG + Chr3:80957761-80957780 MsG0380016247.01.T01:intron 35.0%
!! AGTTGATAGAGCATTGGAAT+GGG + Chr3:80959452-80959471 MsG0380016247.01.T01:CDS 35.0%
!! CAATACCTCCAGTTGTTTTA+AGG - Chr3:80957664-80957683 None:intergenic 35.0%
!! TAGTTGATAGAGCATTGGAA+TGG + Chr3:80959451-80959470 MsG0380016247.01.T01:CDS 35.0%
!!! AATCACTTTTTTTGCGCGTT+TGG + Chr3:80957790-80957809 MsG0380016247.01.T01:intron 35.0%
!!! TTCTCTTTCTCTTTTGGTTC+TGG - Chr3:80959300-80959319 None:intergenic 35.0%
AAAAAAGTGATTCTGCAGCC+AGG - Chr3:80957782-80957801 None:intergenic 40.0%
AAACCTTTCAATCCTCTGCT+TGG + Chr3:80960352-80960371 MsG0380016247.01.T01:CDS 40.0%
AAATGGATGTATGTAGGCAG+TGG + Chr3:80955356-80955375 MsG0380016247.01.T01:five_prime_UTR 40.0%
AACCTTTCAATCCTCTGCTT+GGG + Chr3:80960353-80960372 MsG0380016247.01.T01:CDS 40.0%
AAGATTCACTCATTGTTGGG+TGG + Chr3:80960070-80960089 MsG0380016247.01.T01:intron 40.0%
AAGGAAAACCAGTGTTCAGT+AGG - Chr3:80962350-80962369 None:intergenic 40.0%
AAGTGGGTGAATTACGGTAA+GGG + Chr3:80955887-80955906 MsG0380016247.01.T01:CDS 40.0%
AATACATCACTACTTGGCTG+TGG - Chr3:80956990-80957009 None:intergenic 40.0%
ACGGTCTTTAGTGATTGAGA+CGG + Chr3:80958354-80958373 MsG0380016247.01.T01:intron 40.0%
ACTCATGATTCATCGTTAGC+AGG + Chr3:80955740-80955759 MsG0380016247.01.T01:CDS 40.0%
ACTTACAACCTACGTCCAAA+TGG - Chr3:80962400-80962419 None:intergenic 40.0%
AGAAGATATAGTGGTGAGTG+TGG + Chr3:80958749-80958768 MsG0380016247.01.T01:intron 40.0%
AGAGAGGTTGTATCTTGTCT+TGG - Chr3:80961611-80961630 None:intergenic 40.0%
AGAGGTAGTAATCCAGATGA+GGG - Chr3:80958109-80958128 None:intergenic 40.0%
AGAGGTTGTATCTTGTCTTG+GGG - Chr3:80961609-80961628 None:intergenic 40.0%
AGCTGCATTATTGTGGGAAA+AGG + Chr3:80961573-80961592 MsG0380016247.01.T01:CDS 40.0%
AGGACAAAAAGCTGAGTTGT+AGG - Chr3:80961797-80961816 None:intergenic 40.0%
AGGATGGTGAAACATTTCAG+TGG + Chr3:80960729-80960748 MsG0380016247.01.T01:CDS 40.0%
AGTTTGTGAAGAAGGCGAAT+TGG + Chr3:80956038-80956057 MsG0380016247.01.T01:CDS 40.0%
ATAATTGACCACAAGCCAAC+AGG - Chr3:80959324-80959343 None:intergenic 40.0%
ATACATACTCTCTCTGTGGT+TGG + Chr3:80956948-80956967 MsG0380016247.01.T01:intron 40.0%
ATATATGCTCATCCCTCATC+TGG + Chr3:80958094-80958113 MsG0380016247.01.T01:intron 40.0%
CAAAGCGCAAGAATGCTAAA+GGG - Chr3:80958488-80958507 None:intergenic 40.0%
CCTAACAGCTCAACCATAAA+AGG - Chr3:80961296-80961315 None:intergenic 40.0%
CTATATGTCCATTTGGACGT+AGG + Chr3:80962389-80962408 MsG0380016247.01.T01:three_prime_UTR 40.0%
CTCATGATTCATCGTTAGCA+GGG + Chr3:80955741-80955760 MsG0380016247.01.T01:CDS 40.0%
CTCGTGTAGAATTGAAAGTC+GGG - Chr3:80957920-80957939 None:intergenic 40.0%
CTGTACAAGTGGGTGAATTA+CGG + Chr3:80955881-80955900 MsG0380016247.01.T01:CDS 40.0%
CTTCAATTTCTTGCCCTCTT+GGG + Chr3:80962023-80962042 MsG0380016247.01.T01:intron 40.0%
GAAAGATGCAAGAAAGAGGA+TGG + Chr3:80962176-80962195 MsG0380016247.01.T01:CDS 40.0%
GAAGCTGACTATCCAGATAA+AGG + Chr3:80960385-80960404 MsG0380016247.01.T01:CDS 40.0%
GAATGAAGTTCGTGATTCGA+AGG + Chr3:80955817-80955836 MsG0380016247.01.T01:CDS 40.0%
GACAGAAGCTGCATTATTGT+GGG + Chr3:80961567-80961586 MsG0380016247.01.T01:CDS 40.0%
GACTACGGTTGACTAACAAA+AGG - Chr3:80956503-80956522 None:intergenic 40.0%
GAGAGGTTGTATCTTGTCTT+GGG - Chr3:80961610-80961629 None:intergenic 40.0%
GATTGTATCCTACTGAACAC+TGG + Chr3:80962339-80962358 MsG0380016247.01.T01:exon 40.0%
GCAAGAAAGATGCAAGAAAG+AGG + Chr3:80962172-80962191 MsG0380016247.01.T01:CDS 40.0%
GCTCGTGTAGAATTGAAAGT+CGG - Chr3:80957921-80957940 None:intergenic 40.0%
GCTGAAACAGATGATGAAGA+TGG + Chr3:80959087-80959106 MsG0380016247.01.T01:CDS 40.0%
GGACAAAAACTCTTCACTTG+AGG + Chr3:80957376-80957395 MsG0380016247.01.T01:CDS 40.0%
GGACTCATCAAGATCTTATC+CGG - Chr3:80955974-80955993 None:intergenic 40.0%
GGGTTAGACTTTGTAAGGTA+AGG + Chr3:80961314-80961333 MsG0380016247.01.T01:intron 40.0%
GTAAACAAGCAAGGATGGTT+TGG - Chr3:80957024-80957043 None:intergenic 40.0%
GTATCATCTTCAGAAAAGGG+GGG - Chr3:80961950-80961969 None:intergenic 40.0%
GTCAATGAAGTCCTACGTTT+AGG - Chr3:80958135-80958154 None:intergenic 40.0%
GTCCGAGTTGTGTTAAGAAA+GGG - Chr3:80957692-80957711 None:intergenic 40.0%
GTCCTTCAAATCTGTGTGTT+TGG + Chr3:80961812-80961831 MsG0380016247.01.T01:intron 40.0%
GTCGAAACTACGATATCTTC+TGG - Chr3:80957498-80957517 None:intergenic 40.0%
GTCTCACATCTTCGCATATT+GGG + Chr3:80962489-80962508 MsG0380016247.01.T01:three_prime_UTR 40.0%
GTGAGTCATATTGCACACAA+GGG + Chr3:80958723-80958742 MsG0380016247.01.T01:intron 40.0%
GTTGGACACCTTAAAACAAC+TGG + Chr3:80957653-80957672 MsG0380016247.01.T01:CDS 40.0%
GTTGGTATGCTAATTAACGC+AGG + Chr3:80956394-80956413 MsG0380016247.01.T01:intron 40.0%
TAGAGGTAGTAATCCAGATG+AGG - Chr3:80958110-80958129 None:intergenic 40.0%
TATCATCTTCAGAAAAGGGG+GGG - Chr3:80961949-80961968 None:intergenic 40.0%
TATGGTACCATGCACATCAA+GGG + Chr3:80960809-80960828 MsG0380016247.01.T01:CDS 40.0%
TCAAAGCGCAAGAATGCTAA+AGG - Chr3:80958489-80958508 None:intergenic 40.0%
TCACTTCACTTTCAATCTCG+TGG - Chr3:80959907-80959926 None:intergenic 40.0%
TCATGATTCATCGTTAGCAG+GGG + Chr3:80955742-80955761 MsG0380016247.01.T01:CDS 40.0%
TCGGAAGTCTCATATCTTCA+AGG + Chr3:80957594-80957613 MsG0380016247.01.T01:CDS 40.0%
TGAAACATTTCAGTGGAGCA+AGG + Chr3:80960736-80960755 MsG0380016247.01.T01:CDS 40.0%
TGACAGAAGCTGCATTATTG+TGG + Chr3:80961566-80961585 MsG0380016247.01.T01:CDS 40.0%
TGCAATCTGTTCGCAGAATT+TGG + Chr3:80962061-80962080 MsG0380016247.01.T01:intron 40.0%
TGTACCTTCTCTACTTCGAT+AGG - Chr3:80959166-80959185 None:intergenic 40.0%
TGTCTCACATCTTCGCATAT+TGG + Chr3:80962488-80962507 MsG0380016247.01.T01:three_prime_UTR 40.0%
TGTTGTCTTGAACAAACCCA+TGG - Chr3:80961447-80961466 None:intergenic 40.0%
TTAGTACTTGTCCCACCAAA+CGG - Chr3:80956852-80956871 None:intergenic 40.0%
TTCACCATCCTCAAACTGTA+GGG - Chr3:80960720-80960739 None:intergenic 40.0%
TTCATCATGATTCAAACCCG+CGG - Chr3:80955786-80955805 None:intergenic 40.0%
TTGACACTGAGAGTTTGACT+TGG - Chr3:80955663-80955682 None:intergenic 40.0%
TTTCACCATCCTCAAACTGT+AGG - Chr3:80960721-80960740 None:intergenic 40.0%
TTTGGGAAAGGATGCAAGTA+TGG + Chr3:80956659-80956678 MsG0380016247.01.T01:intron 40.0%
! AAAGATCTTTTGCAGACTGC+AGG - Chr3:80957440-80957459 None:intergenic 40.0%
! AAGATCTTTTGCAGACTGCA+GGG - Chr3:80957439-80957458 None:intergenic 40.0%
! CACTTTTGCAATGAAGAGAG+TGG - Chr3:80959405-80959424 None:intergenic 40.0%
! CCTTTTATGGTTGAGCTGTT+AGG + Chr3:80961293-80961312 MsG0380016247.01.T01:intron 40.0%
! CTCCTAGGTTCATTTTGTCA+AGG + Chr3:80959537-80959556 MsG0380016247.01.T01:intron 40.0%
! CTGCAAAAGATCTTTTTCCC+AGG + Chr3:80957445-80957464 MsG0380016247.01.T01:CDS 40.0%
! GGTTTTACTGTAAATGGTGC+AGG + Chr3:80960252-80960271 MsG0380016247.01.T01:intron 40.0%
! TAACCTTTGGGCTTTGTAGT+TGG - Chr3:80961538-80961557 None:intergenic 40.0%
! TATCGAAGTAGAGAAGGTAC+AGG + Chr3:80959165-80959184 MsG0380016247.01.T01:CDS 40.0%
! TGCAAAGTGTCACTCATTGT+GGG - Chr3:80960032-80960051 None:intergenic 40.0%
! TTGATGGCCCTAATACTAGA+TGG - Chr3:80959683-80959702 None:intergenic 40.0%
! TTGCAAAGTGTCACTCATTG+TGG - Chr3:80960033-80960052 None:intergenic 40.0%
!! AATCGAGGTAATGGAGTAGT+TGG + Chr3:80956067-80956086 MsG0380016247.01.T01:CDS 40.0%
!! AGTTGGTGGTGTTCATTGTT+TGG + Chr3:80956799-80956818 MsG0380016247.01.T01:intron 40.0%
!! CAATTTTGGGAGGCAAGAAA+TGG + Chr3:80956625-80956644 MsG0380016247.01.T01:intron 40.0%
!! CATTCTTGCGCTTTGATTTG+TGG + Chr3:80958493-80958512 MsG0380016247.01.T01:intron 40.0%
!! GAAGTGCAATAATGGGTGAA+GGG + Chr3:80956342-80956361 MsG0380016247.01.T01:intron 40.0%
!! GTTGATAGAGCATTGGAATG+GGG + Chr3:80959453-80959472 MsG0380016247.01.T01:CDS 40.0%
!! TCGATAGGAAGCACTTCTTA+AGG - Chr3:80959151-80959170 None:intergenic 40.0%
!! TGAAGTGCAATAATGGGTGA+AGG + Chr3:80956341-80956360 MsG0380016247.01.T01:intron 40.0%
!! TGCTAAGGATAGGAGTGTTA+GGG + Chr3:80955994-80956013 MsG0380016247.01.T01:CDS 40.0%
!!! TGAACACTGGTTTTCCTTTG+TGG + Chr3:80962352-80962371 MsG0380016247.01.T01:exon 40.0%
AAGCGGCTTTCCGTATTTAC+TGG + Chr3:80957354-80957373 MsG0380016247.01.T01:CDS 45.0%
ACAGGAGCAATGCAGCATAA+TGG - Chr3:80955605-80955624 None:intergenic 45.0%
ACCTTTCAATCCTCTGCTTG+GGG + Chr3:80960354-80960373 MsG0380016247.01.T01:CDS 45.0%
ACTAAGCAATGCAAGCCCTT+TGG + Chr3:80956100-80956119 MsG0380016247.01.T01:CDS 45.0%
AGACAACAGAACTGGAGAGA+AGG + Chr3:80961459-80961478 MsG0380016247.01.T01:CDS 45.0%
AGCGGCTTTCCGTATTTACT+GGG + Chr3:80957355-80957374 MsG0380016247.01.T01:CDS 45.0%
AGTCCTACGTTTAGGGATAG+AGG - Chr3:80958127-80958146 None:intergenic 45.0%
AGTGGGTGAATTACGGTAAG+GGG + Chr3:80955888-80955907 MsG0380016247.01.T01:CDS 45.0%
ATACTCTCTCTGTGGTTGGA+TGG + Chr3:80956952-80956971 MsG0380016247.01.T01:intron 45.0%
ATCATCTTCAGAAAAGGGGG+GGG - Chr3:80961948-80961967 None:intergenic 45.0%
ATCGATACATGGGTGGCTAT+TGG + Chr3:80962236-80962255 MsG0380016247.01.T01:CDS 45.0%
ATTCTCCATGATGGTTCGCA+TGG + Chr3:80959216-80959235 MsG0380016247.01.T01:CDS 45.0%
CAAAAACACGAGAGCCACAA+AGG - Chr3:80962369-80962388 None:intergenic 45.0%
CAACTAGGTTTGAGTACTCG+AGG - Chr3:80959437-80959456 None:intergenic 45.0%
CAAGTGGGTGAATTACGGTA+AGG + Chr3:80955886-80955905 MsG0380016247.01.T01:CDS 45.0%
CAGTGACAAGCAACAACCAT+TGG - Chr3:80960605-80960624 None:intergenic 45.0%
CATAGACCGTAATCCACATC+AGG + Chr3:80960877-80960896 MsG0380016247.01.T01:CDS 45.0%
CCAAGAGGGCAAGAAATTGA+AGG - Chr3:80962025-80962044 None:intergenic 45.0%
CCTTCAATTTCTTGCCCTCT+TGG + Chr3:80962022-80962041 MsG0380016247.01.T01:intron 45.0%
CGTGAGTCATATTGCACACA+AGG + Chr3:80958722-80958741 MsG0380016247.01.T01:intron 45.0%
CTAACACTCCTATCCTTAGC+AGG - Chr3:80955995-80956014 None:intergenic 45.0%
CTACCTCTATCCCTAAACGT+AGG + Chr3:80958121-80958140 MsG0380016247.01.T01:intron 45.0%
CTATGGTACCATGCACATCA+AGG + Chr3:80960808-80960827 MsG0380016247.01.T01:CDS 45.0%
CTCACGGGAATTGATAAGCA+AGG - Chr3:80957273-80957292 None:intergenic 45.0%
CTGCGAGTCTATTATGCTCT+CGG + Chr3:80957575-80957594 MsG0380016247.01.T01:CDS 45.0%
GACTCCATGCTTCCAACATT+AGG - Chr3:80957886-80957905 None:intergenic 45.0%
GAGACCAGATCAGAGACATT+TGG + Chr3:80961702-80961721 MsG0380016247.01.T01:CDS 45.0%
GAGGACTGGGATAATTTCGT+TGG + Chr3:80956376-80956395 MsG0380016247.01.T01:intron 45.0%
GATCCAACTACAAAGCCCAA+AGG + Chr3:80961532-80961551 MsG0380016247.01.T01:CDS 45.0%
GATCTTGATGAGTCCTGCTA+AGG + Chr3:80955979-80955998 MsG0380016247.01.T01:CDS 45.0%
GATGTGGTTTCAGCAGCAAT+TGG - Chr3:80957117-80957136 None:intergenic 45.0%
GCAGACGGAGAAAATAGAGT+TGG + Chr3:80958670-80958689 MsG0380016247.01.T01:intron 45.0%
GCGGGTCCTATAAAAAGAGA+CGG + Chr3:80958335-80958354 MsG0380016247.01.T01:intron 45.0%
GCTTCCTATCGAAGTAGAGA+AGG + Chr3:80959159-80959178 MsG0380016247.01.T01:CDS 45.0%
GCTTGAACAGTTACAGAGAC+AGG + Chr3:80961765-80961784 MsG0380016247.01.T01:CDS 45.0%
GGACACCTTAAAACAACTGG+AGG + Chr3:80957656-80957675 MsG0380016247.01.T01:CDS 45.0%
GGCAACTTCACCAATAAACC+AGG - Chr3:80961664-80961683 None:intergenic 45.0%
GGTCCGAGTTGTGTTAAGAA+AGG - Chr3:80957693-80957712 None:intergenic 45.0%
GGTGGTGTTCATTGTTTGGT+GGG + Chr3:80956803-80956822 MsG0380016247.01.T01:intron 45.0%
GGTTCTTATCGATACATGGG+TGG + Chr3:80962229-80962248 MsG0380016247.01.T01:CDS 45.0%
GTAGAGTTATACAGAGTGGC+AGG + Chr3:80955300-80955319 MsG0380016247.01.T01:five_prime_UTR 45.0%
TAGTACTTGTCCCACCAAAC+GGG - Chr3:80956851-80956870 None:intergenic 45.0%
TCAGCAAGTCTGATGACAAG+CGG + Chr3:80957337-80957356 MsG0380016247.01.T01:CDS 45.0%
TCGATACATGGGTGGCTATT+GGG + Chr3:80962237-80962256 MsG0380016247.01.T01:CDS 45.0%
TCTTTCACTGTGGAGAGAAG+TGG - Chr3:80955121-80955140 None:intergenic 45.0%
TGATCAGAGTATAACCGTCG+CGG + Chr3:80955547-80955566 MsG0380016247.01.T01:five_prime_UTR 45.0%
TGATGAGTCCTGCTAAGGAT+AGG + Chr3:80955984-80956003 MsG0380016247.01.T01:CDS 45.0%
TGATGTGCATGGTACCATAG+TGG - Chr3:80960808-80960827 None:intergenic 45.0%
TGGAACGTGAATCGAGGTAA+TGG + Chr3:80956058-80956077 MsG0380016247.01.T01:CDS 45.0%
TGGGCAGACTCCAATTTGAA+AGG + Chr3:80960647-80960666 MsG0380016247.01.T01:CDS 45.0%
TGTCACTCATTGTGGGACAA+AGG - Chr3:80960025-80960044 None:intergenic 45.0%
TGTTCTCACCCTACAGTTTG+AGG + Chr3:80960709-80960728 MsG0380016247.01.T01:CDS 45.0%
TTCAAGGCGAAAGACATGTC+AGG - Chr3:80958784-80958803 None:intergenic 45.0%
TTCATCGTTAGCAGGGGATT+CGG + Chr3:80955748-80955767 MsG0380016247.01.T01:CDS 45.0%
TTCTCCATGATGGTTCGCAT+GGG + Chr3:80959217-80959236 MsG0380016247.01.T01:CDS 45.0%
TTGGGAGATAAAGTAGGGGA+GGG - Chr3:80961029-80961048 None:intergenic 45.0%
! CACGAGCCTTCTAGTGTTTT+AGG + Chr3:80957934-80957953 MsG0380016247.01.T01:intron 45.0%
! GACAAAAGAAAGCACAGCTG+AGG - Chr3:80959493-80959512 None:intergenic 45.0%
! GCAGGTTAGTCATCATCCAA+TGG + Chr3:80960586-80960605 MsG0380016247.01.T01:intron 45.0%
! GTTGTTGCTTGTCACTGTGA+GGG + Chr3:80960608-80960627 MsG0380016247.01.T01:CDS 45.0%
! TGGTGGTGTTCATTGTTTGG+TGG + Chr3:80956802-80956821 MsG0380016247.01.T01:intron 45.0%
! TTTCTTCTGGCTGCGCATTT+CGG + Chr3:80962459-80962478 MsG0380016247.01.T01:three_prime_UTR 45.0%
!! AAGAGAAACCTGTTGGCTTG+TGG + Chr3:80959313-80959332 MsG0380016247.01.T01:CDS 45.0%
!! ACTGCTCTGAAAGCCTTTCT+TGG + Chr3:80960135-80960154 MsG0380016247.01.T01:intron 45.0%
!! ATTGCAGCTTTTGCTGTGTC+CGG + Chr3:80960301-80960320 MsG0380016247.01.T01:CDS 45.0%
!! CGTGATTCGAAGGTGTTGAA+TGG + Chr3:80955827-80955846 MsG0380016247.01.T01:CDS 45.0%
!! CTGCTAAGGATAGGAGTGTT+AGG + Chr3:80955993-80956012 MsG0380016247.01.T01:CDS 45.0%
!! GATAGGAGTGTTAGGGTGAT+CGG + Chr3:80956001-80956020 MsG0380016247.01.T01:CDS 45.0%
!! GATTCGAAGGTGTTGAATGG+TGG + Chr3:80955830-80955849 MsG0380016247.01.T01:CDS 45.0%
!! AAAAAAAATGTAAAATAATT+AGG + Chr3:80958269-80958288 MsG0380016247.01.T01:intron 5.0%
AGAGTATAACCGTCGCGGAT+CGG + Chr3:80955552-80955571 MsG0380016247.01.T01:five_prime_UTR 50.0%
AGGAAATTGCGAAGGGAGAG+AGG - Chr3:80961627-80961646 None:intergenic 50.0%
AGGGAAGAGGATGGAAGTTC+TGG + Chr3:80960627-80960646 MsG0380016247.01.T01:CDS 50.0%
AGGTTTGCACTGTCGACCTT+CGG - Chr3:80960338-80960357 None:intergenic 50.0%
AGTACTTGTCCCACCAAACG+GGG - Chr3:80956850-80956869 None:intergenic 50.0%
ATACATGGGTGGCTATTGGG+AGG + Chr3:80962240-80962259 MsG0380016247.01.T01:CDS 50.0%
ATGATTCAAACCCGCGGAAG+AGG - Chr3:80955780-80955799 None:intergenic 50.0%
CAAACCCATGCGAACCATCA+TGG - Chr3:80959224-80959243 None:intergenic 50.0%
CTAACGTGCGCACTTATGCA+CGG - Chr3:80955052-80955071 None:intergenic 50.0%
CTAGAGAAGACAGAGCCATG+TGG + Chr3:80957406-80957425 MsG0380016247.01.T01:CDS 50.0%
CTCAACCTTGAGTCAGTTGG+AGG - Chr3:80961685-80961704 None:intergenic 50.0%
CTCACCCTACAGTTTGAGGA+TGG + Chr3:80960713-80960732 MsG0380016247.01.T01:CDS 50.0%
CTGTTTCGATCGATCGAGAC+CGG + Chr3:80955621-80955640 MsG0380016247.01.T01:CDS 50.0%
GCAGCCCAGATGGTTTAAGA+AGG + Chr3:80962198-80962217 MsG0380016247.01.T01:CDS 50.0%
GCGAATTGGAACGTGAATCG+AGG + Chr3:80956052-80956071 MsG0380016247.01.T01:CDS 50.0%
GGGAAGAGGATGGAAGTTCT+GGG + Chr3:80960628-80960647 MsG0380016247.01.T01:CDS 50.0%
GGTCTCAACCTTGAGTCAGT+TGG - Chr3:80961688-80961707 None:intergenic 50.0%
GTCGGCGAAGTTTGTGAAGA+AGG + Chr3:80956030-80956049 MsG0380016247.01.T01:CDS 50.0%
GTTGGGAGATAAAGTAGGGG+AGG - Chr3:80961030-80961049 None:intergenic 50.0%
TAACGTGCGCACTTATGCAC+GGG - Chr3:80955051-80955070 None:intergenic 50.0%
TATGCCTTCCTGCGACAATC+TGG - Chr3:80957535-80957554 None:intergenic 50.0%
TCATAAGTCTCCCCAAGCAG+AGG - Chr3:80960367-80960386 None:intergenic 50.0%
TCCCCAAGCAGAGGATTGAA+AGG - Chr3:80960358-80960377 None:intergenic 50.0%
TCTAACAAGAAGCTGGCTGC+AGG + Chr3:80960568-80960587 MsG0380016247.01.T01:intron 50.0%
TGAATTACGGTAAGGGGTGG+AGG + Chr3:80955894-80955913 MsG0380016247.01.T01:CDS 50.0%
TGGTTCGCATGGGTTTGAGA+TGG + Chr3:80959227-80959246 MsG0380016247.01.T01:CDS 50.0%
TTCGGTGAAATCCTCTTCCG+CGG + Chr3:80955766-80955785 MsG0380016247.01.T01:CDS 50.0%
! AGCATTGGAATGGGGAAAGC+AGG + Chr3:80959461-80959480 MsG0380016247.01.T01:CDS 50.0%
! AGGTGGTTTGTGCTGGAAGA+TGG + Chr3:80955920-80955939 MsG0380016247.01.T01:CDS 50.0%
! AGTTGCCTCCAACTGACTCA+AGG + Chr3:80961677-80961696 MsG0380016247.01.T01:CDS 50.0%
! GGTTGTTGCTTGTCACTGTG+AGG + Chr3:80960607-80960626 MsG0380016247.01.T01:CDS 50.0%
! TTCTTCTGGCTGCGCATTTC+GGG + Chr3:80962460-80962479 MsG0380016247.01.T01:three_prime_UTR 50.0%
!! ATAATGGGTGAAGGGCTGTG+AGG + Chr3:80956350-80956369 MsG0380016247.01.T01:intron 50.0%
!! CAGACTAGGTGCTACTGCTA+GGG - Chr3:80957827-80957846 None:intergenic 50.0%
!! CGAGGTAATGGAGTAGTTGG+AGG + Chr3:80956070-80956089 MsG0380016247.01.T01:CDS 50.0%
!! GAGTTTGACTTGGACACCAC+CGG - Chr3:80955653-80955672 None:intergenic 50.0%
!! GGTAATGGAGTAGTTGGAGG+TGG + Chr3:80956073-80956092 MsG0380016247.01.T01:CDS 50.0%
!! TCGAAGGTGTTGAATGGTGG+TGG + Chr3:80955833-80955852 MsG0380016247.01.T01:CDS 50.0%
!! TTGAATGGTGGTGGTGTAGC+TGG + Chr3:80955842-80955861 MsG0380016247.01.T01:CDS 50.0%
AAAGAGGATGGCAGCCCAGA+TGG + Chr3:80962188-80962207 MsG0380016247.01.T01:CDS 55.0%
ACCAAACGGGGAGAAGTGGA+AGG - Chr3:80956838-80956857 None:intergenic 55.0%
ACCATGCACATCAAGGGCAG+CGG + Chr3:80960815-80960834 MsG0380016247.01.T01:CDS 55.0%
ACTGTGGAGAGAAGTGGCGA+AGG - Chr3:80955115-80955134 None:intergenic 55.0%
AGTGGCGAAGGAAGAGAGAG+AGG - Chr3:80955103-80955122 None:intergenic 55.0%
CAAACGGGGAGAAGTGGAAG+GGG - Chr3:80956836-80956855 None:intergenic 55.0%
CCAAACGGGGAGAAGTGGAA+GGG - Chr3:80956837-80956856 None:intergenic 55.0%
CCTAGCAGTAGCACCTAGTC+TGG + Chr3:80957825-80957844 MsG0380016247.01.T01:intron 55.0%
CGATCCAGATTGTCGCAGGA+AGG + Chr3:80957528-80957547 MsG0380016247.01.T01:CDS 55.0%
CGGTCTCGATCGATCGAAAC+AGG - Chr3:80955623-80955642 None:intergenic 55.0%
CTGCAGGGCTTCAATCCACA+TGG - Chr3:80957424-80957443 None:intergenic 55.0%
GAGTGTTAGGGTGATCGGTG+AGG + Chr3:80956006-80956025 MsG0380016247.01.T01:CDS 55.0%
GCTTGTCACTGTGAGGGAAG+AGG + Chr3:80960614-80960633 MsG0380016247.01.T01:CDS 55.0%
GGAAAATCTCCGATCCGCGA+CGG - Chr3:80955564-80955583 None:intergenic 55.0%
GGCGGGGATACTGTACAAGT+GGG + Chr3:80955871-80955890 MsG0380016247.01.T01:CDS 55.0%
GGCTGTGAGGTAAGAGGACT+GGG + Chr3:80956363-80956382 MsG0380016247.01.T01:intron 55.0%
GGGTGAATTACGGTAAGGGG+TGG + Chr3:80955891-80955910 MsG0380016247.01.T01:CDS 55.0%
GTCACTGTGAGGGAAGAGGA+TGG + Chr3:80960618-80960637 MsG0380016247.01.T01:CDS 55.0%
GTGAAGGGCTGTGAGGTAAG+AGG + Chr3:80956357-80956376 MsG0380016247.01.T01:intron 55.0%
TAGGGTGATCGGTGAGGAGT+CGG + Chr3:80956012-80956031 MsG0380016247.01.T01:CDS 55.0%
TCCACTTCTCCCCGTTTGGT+GGG + Chr3:80956838-80956857 MsG0380016247.01.T01:intron 55.0%
TCGGTGAAATCCTCTTCCGC+GGG + Chr3:80955767-80955786 MsG0380016247.01.T01:CDS 55.0%
TGGAATGGGGAAAGCAGGTC+AGG + Chr3:80959466-80959485 MsG0380016247.01.T01:intron 55.0%
TGGCGGGGATACTGTACAAG+TGG + Chr3:80955870-80955889 MsG0380016247.01.T01:CDS 55.0%
TGTAGGGTGAGAACACCCAC+AGG - Chr3:80960704-80960723 None:intergenic 55.0%
TTCCACTTCTCCCCGTTTGG+TGG + Chr3:80956837-80956856 MsG0380016247.01.T01:intron 55.0%
TTTGCACTGTCGACCTTCGG+TGG - Chr3:80960335-80960354 None:intergenic 55.0%
! TGGTGGTGTAGCTGGTAGTG+TGG + Chr3:80955850-80955869 MsG0380016247.01.T01:CDS 55.0%
! TGGTGTAGCTGGTAGTGTGG+CGG + Chr3:80955853-80955872 MsG0380016247.01.T01:CDS 55.0%
!! CCAGACTAGGTGCTACTGCT+AGG - Chr3:80957828-80957847 None:intergenic 55.0%
ACCTTCGGTGGACGCATAGC+CGG - Chr3:80960323-80960342 None:intergenic 60.0%
ATCGCTGCTTGTCAGAGCCC+TGG - Chr3:80957466-80957485 None:intergenic 60.0%
CCCTTCCACTTCTCCCCGTT+TGG + Chr3:80956834-80956853 MsG0380016247.01.T01:intron 60.0%
GCTGCGATCCAGATTGTCGC+AGG + Chr3:80957524-80957543 MsG0380016247.01.T01:CDS 60.0%
GGGCTGTGAGGTAAGAGGAC+TGG + Chr3:80956362-80956381 MsG0380016247.01.T01:intron 60.0%
TCCCACCAAACGGGGAGAAG+TGG - Chr3:80956842-80956861 None:intergenic 60.0%
TCCGCTGCCCTTGATGTGCA+TGG - Chr3:80960819-80960838 None:intergenic 60.0%
TCGCTGCTTGTCAGAGCCCT+GGG - Chr3:80957465-80957484 None:intergenic 60.0%
! CGATCGAGACCGGAGTACTC+CGG + Chr3:80955631-80955650 MsG0380016247.01.T01:CDS 60.0%
! GAGGTCGAGGTGGTTTGTGC+TGG + Chr3:80955913-80955932 MsG0380016247.01.T01:CDS 60.0%
! GGTGTAGCTGGTAGTGTGGC+GGG + Chr3:80955854-80955873 MsG0380016247.01.T01:CDS 60.0%
! GTGTAGCTGGTAGTGTGGCG+GGG + Chr3:80955855-80955874 MsG0380016247.01.T01:CDS 60.0%
! TGGACACCACCGGAGTACTC+CGG - Chr3:80955643-80955662 None:intergenic 60.0%
ACGGTAAGGGGTGGAGGTCG+AGG + Chr3:80955900-80955919 MsG0380016247.01.T01:CDS 65.0%
GTAAGGGGTGGAGGTCGAGG+TGG + Chr3:80955903-80955922 MsG0380016247.01.T01:CDS 65.0%
TCCGGCTATGCGTCCACCGA+AGG + Chr3:80960319-80960338 MsG0380016247.01.T01:CDS 65.0%
! TCGAGACCGGAGTACTCCGG+TGG + Chr3:80955634-80955653 MsG0380016247.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 80955040 80962576 80955040 ID=MsG0380016247.01;Name=MsG0380016247.01
Chr3 mRNA 80955040 80962576 80955040 ID=MsG0380016247.01.T01;Parent=MsG0380016247.01;Name=MsG0380016247.01.T01;_AED=0.29;_eAED=0.29;_QI=556|0.83|0.85|1|1|1|7|222|800
Chr3 exon 80955040 80956138 80955040 ID=MsG0380016247.01.T01:exon:10550;Parent=MsG0380016247.01.T01
Chr3 exon 80957321 80957677 80957321 ID=MsG0380016247.01.T01:exon:10551;Parent=MsG0380016247.01.T01
Chr3 exon 80958973 80959482 80958973 ID=MsG0380016247.01.T01:exon:10552;Parent=MsG0380016247.01.T01
Chr3 exon 80960274 80960429 80960274 ID=MsG0380016247.01.T01:exon:10553;Parent=MsG0380016247.01.T01
Chr3 exon 80960590 80960898 80960590 ID=MsG0380016247.01.T01:exon:10554;Parent=MsG0380016247.01.T01
Chr3 exon 80961442 80961786 80961442 ID=MsG0380016247.01.T01:exon:10555;Parent=MsG0380016247.01.T01
Chr3 exon 80962172 80962576 80962172 ID=MsG0380016247.01.T01:exon:10556;Parent=MsG0380016247.01.T01
Chr3 five_prime_UTR 80955040 80955595 80955040 ID=MsG0380016247.01.T01:five_prime_utr;Parent=MsG0380016247.01.T01
Chr3 CDS 80955596 80956138 80955596 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80957321 80957677 80957321 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80958973 80959482 80958973 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80960274 80960429 80960274 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80960590 80960898 80960590 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80961442 80961786 80961442 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 CDS 80962172 80962354 80962172 ID=MsG0380016247.01.T01:cds;Parent=MsG0380016247.01.T01
Chr3 three_prime_UTR 80962355 80962576 80962355 ID=MsG0380016247.01.T01:three_prime_utr;Parent=MsG0380016247.01.T01
Gene Sequence

>MsG0380016247.01.T01

ATGAATCCATTATGCTGCATTGCTCCTGTTTCGATCGATCGAGACCGGAGTACTCCGGTGGTGTCCAAGTCAAACTCTCAGTGTCAATTAGGGTTAGATTCATCGATCAGAACGGTGAACTGTGCTTCTAAATCGAGTTTTTCAACTCATGATTCATCGTTAGCAGGGGATTCGGTGAAATCCTCTTCCGCGGGTTTGAATCATGATGAAGATGATGTGGTGAATGAAGTTCGTGATTCGAAGGTGTTGAATGGTGGTGGTGTAGCTGGTAGTGTGGCGGGGATACTGTACAAGTGGGTGAATTACGGTAAGGGGTGGAGGTCGAGGTGGTTTGTGCTGGAAGATGGTGTGCTTTCTTATTATAAGATTCATGGACCGGATAAGATCTTGATGAGTCCTGCTAAGGATAGGAGTGTTAGGGTGATCGGTGAGGAGTCGGCGAAGTTTGTGAAGAAGGCGAATTGGAACGTGAATCGAGGTAATGGAGTAGTTGGAGGTGGAGCTACTAAGCAATGCAAGCCCTTTGGTGAGATACATTTGAAGGTTTCTTCAGTTCGCTTCAGCAAGTCTGATGACAAGCGGCTTTCCGTATTTACTGGGACAAAAACTCTTCACTTGAGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAAGCCCTGCAGTCTGCAAAAGATCTTTTTCCCAGGGCTCTGACAAGCAGCGATCTTGCAACTCCAGAAGATATCGTAGTTTCGACAGAGAAGCTGCGATCCAGATTGTCGCAGGAAGGCATAAATGAAGAAATCATTAATGACTGCGAGTCTATTATGCTCTCGGAAGTCTCATATCTTCAAGGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTAAAACAACTGGAGTCAGTCATCTTACTCCTTGATTTGACCACTTGTGTATCAGATTTCTATTCTGTTATGTCGGAAGGCAGTGCTACAGATTCAGTAGTAGATAATGAAAGTCAAGATGGAGCAGATGCTGAAACAGATGATGAAGATGGAACATATTTTGATACAAATGAGACGTTATATTCAGACGCCTTAAGAAGTGCTTCCTATCGAAGTAGAGAAGGTACAGGAAGTGCCAGTATATATGATAGAGATTATATTCTCCATGATGGTTCGCATGGGTTTGAGATGGCAATCAAAGATATAAGCTATCCTTATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGAGAAACCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTTGAAGACCTCGAGTACTCAAACCTAGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGAATTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCCGGCTATGCGTCCACCGAAGGTCGACAGTGCAAACCTTTCAATCCTCTGCTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGAGTTAAATTTTTTTCTGAGAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAGTTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTTCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACTACTTCCATATACAATATTATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAAGGGCAGCGGAAACTACTCTTGCAAACTTAAGTTCAAAGAGCAATCTATCATAGACCGTAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTATTATGTACTCGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCTATGACAGAAGCTGCATTATTGTGGGAAAAGGACAACTATGTCCCCAAGACAAGATACAACCTCTCTCCCTTCGCAATTTCCTTGAATGAAATAATGCCTGGTTTATTGGTGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAGAGACATTTGGAAAATGGAGAGTATGAATATGCAAATGCAGAGAAACTAAGGCTTGAACAGTTACAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAGAAGGATGAAGATGGTTCTTATCGATACATGGGTGGCTATTGGGAGGCAAGAGAAAAGAACAATTGGGATGGAATCTCTGATATATTTGGACAAGGCTGTGATTTGCCTTCATGTTCTGAAGAGATTGTATCCTACTGA

Protein sequence

>MsG0380016247.01.T01

MNPLCCIAPVSIDRDRSTPVVSKSNSQCQLGLDSSIRTVNCASKSSFSTHDSSLAGDSVKSSSAGLNHDEDDVVNEVRDSKVLNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKDRSVRVIGEESAKFVKKANWNVNRGNGVVGGGATKQCKPFGEIHLKVSSVRFSKSDDKRLSVFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSRLSQEGINEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLESVILLLDLTTCVSDFYSVMSEGSATDSVVDNESQDGADAETDDEDGTYFDTNETLYSDALRSASYRSREGTGSASIYDRDYILHDGSHGFEMAIKDISYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSNLVDRALEWGKQGNELMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWEKDNYVPKTRYNLSPFAISLNEIMPGLLVKLPPTDSRLRPDQRHLENGEYEYANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGSYRYMGGYWEAREKNNWDGISDIFGQGCDLPSCSEEIVSY*