AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044457.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044457.01.T01 MTR_8g463790 92.086 417 10 1 1 394 1 417 0.0 793
MsG0880044457.01.T01 MTR_3g070900 47.753 356 154 5 60 387 99 450 8.62e-118 350
MsG0880044457.01.T01 MTR_5g083260 46.724 351 155 5 66 387 78 425 1.05e-115 344
MsG0880044457.01.T01 MTR_4g014440 44.140 401 180 8 18 387 21 408 5.18e-115 342
MsG0880044457.01.T01 MTR_4g016940 41.905 420 203 7 2 386 14 427 1.25e-114 341
MsG0880044457.01.T01 MTR_7g068920 45.609 353 161 4 64 386 70 421 1.08e-109 328
MsG0880044457.01.T01 MTR_3g071650 45.930 344 158 4 71 387 89 431 5.76e-109 327
MsG0880044457.01.T01 MTR_7g070060 41.463 410 195 9 12 387 12 410 2.46e-107 322
MsG0880044457.01.T01 MTR_4g014430 45.614 342 161 3 69 386 106 446 1.22e-106 321
MsG0880044457.01.T01 MTR_5g082880 43.429 350 167 5 69 387 163 512 4.37e-104 317
MsG0880044457.01.T01 MTR_7g070060 42.568 296 136 7 124 387 15 308 2.07e-79 247
MsG0880044457.01.T01 MTR_1g050448 39.763 337 168 10 71 386 53 375 1.81e-72 231
MsG0880044457.01.T01 MTR_7g070060 42.491 273 139 6 12 276 12 274 7.54e-71 225
MsG0880044457.01.T01 MTR_1g112210 37.202 336 179 9 71 386 59 382 6.68e-70 225
MsG0880044457.01.T01 MTR_3g464570 35.143 350 185 7 68 387 40 377 3.46e-68 220
MsG0880044457.01.T01 MTR_1g112210 36.607 336 168 10 71 386 59 369 1.38e-66 216
MsG0880044457.01.T01 MTR_3g049330 34.571 350 173 8 68 387 28 351 3.37e-66 214
MsG0880044457.01.T01 MTR_4g121560 33.791 364 183 9 71 393 114 460 1.01e-65 216
MsG0880044457.01.T01 MTR_7g094750 35.537 363 174 13 69 388 89 434 6.43e-65 214
MsG0880044457.01.T01 MTR_5g071350 32.418 364 196 9 62 387 49 400 1.79e-64 211
MsG0880044457.01.T01 MTR_7g093450 33.898 354 184 9 71 387 248 588 1.10e-63 214
MsG0880044457.01.T01 MTR_0136s0010 33.333 354 186 9 71 387 170 510 2.03e-63 212
MsG0880044457.01.T01 MTR_3g035830 35.227 352 172 9 64 386 24 348 1.18e-62 205
MsG0880044457.01.T01 MTR_4g126950 33.523 352 186 12 71 387 109 447 4.50e-62 206
MsG0880044457.01.T01 MTR_2g022560 37.808 365 170 15 65 388 91 439 1.48e-61 205
MsG0880044457.01.T01 MTR_3g021090 35.277 343 166 9 69 382 29 344 2.99e-61 203
MsG0880044457.01.T01 MTR_5g033800 32.222 360 201 8 62 388 136 485 3.65e-61 205
MsG0880044457.01.T01 MTR_4g079700 33.143 350 175 11 67 386 43 363 1.21e-60 200
MsG0880044457.01.T01 MTR_7g109550 32.213 357 175 10 71 386 137 467 2.25e-60 202
MsG0880044457.01.T01 MTR_2g073510 34.593 344 174 9 68 383 30 350 3.13e-60 199
MsG0880044457.01.T01 MTR_3g021060 33.143 350 182 8 64 386 39 363 2.94e-58 194
MsG0880044457.01.T01 MTR_1g058380 34.973 366 182 12 69 394 53 402 2.46e-57 193
MsG0880044457.01.T01 MTR_1g111010 32.047 337 187 9 71 389 32 344 2.86e-57 191
MsG0880044457.01.T01 MTR_2g015720 34.167 360 177 11 54 386 32 358 4.55e-57 191
MsG0880044457.01.T01 MTR_3g090120 32.418 364 193 9 59 388 117 461 5.19e-57 194
MsG0880044457.01.T01 MTR_2g091175 33.048 351 182 11 64 387 43 367 5.20e-57 191
MsG0880044457.01.T01 MTR_4g088030 33.333 345 182 9 68 387 30 351 2.69e-56 189
MsG0880044457.01.T01 MTR_5g059400 29.558 362 212 10 60 387 164 516 8.64e-56 192
MsG0880044457.01.T01 MTR_1g116130 29.558 362 212 10 60 387 164 516 8.64e-56 192
MsG0880044457.01.T01 MTR_2g073500 31.805 349 187 11 67 389 25 348 1.14e-55 187
MsG0880044457.01.T01 MTR_5g034810 34.375 352 173 9 68 389 32 355 1.30e-55 187
MsG0880044457.01.T01 MTR_8g069790 32.022 356 193 10 69 388 176 518 2.76e-55 190
MsG0880044457.01.T01 MTR_4g087730 33.333 354 186 10 61 387 33 363 7.83e-54 182
MsG0880044457.01.T01 MTR_8g093530 31.006 358 196 11 65 391 84 421 5.53e-51 177
MsG0880044457.01.T01 MTR_3g464570 34.397 282 144 6 136 387 3 273 4.63e-48 165
MsG0880044457.01.T01 MTR_7g094750 37.273 220 123 7 69 276 89 305 4.73e-44 155
MsG0880044457.01.T01 MTR_6g061710 27.224 371 212 12 67 392 163 520 4.31e-41 152
MsG0880044457.01.T01 MTR_1g076690 27.614 373 212 9 67 394 219 578 1.11e-39 149
MsG0880044457.01.T01 MTR_5g033800 32.314 229 134 5 62 276 136 357 3.39e-38 141
MsG0880044457.01.T01 MTR_8g104970 27.882 373 206 12 68 394 117 472 5.29e-36 137
MsG0880044457.01.T01 MTR_7g033230 27.027 370 219 13 64 393 257 615 6.37e-35 136
MsG0880044457.01.T01 MTR_6g016880 27.765 425 224 16 14 386 26 419 9.28e-35 133
MsG0880044457.01.T01 MTR_7g033230 27.027 370 219 13 64 393 327 685 1.75e-34 135
MsG0880044457.01.T01 MTR_8g027900 29.494 356 202 12 71 387 211 556 2.66e-34 134
MsG0880044457.01.T01 MTR_5g035080 27.763 371 198 11 68 388 72 422 6.14e-34 131
MsG0880044457.01.T01 MTR_5g035150 25.891 421 227 13 18 382 36 427 7.20e-34 130
MsG0880044457.01.T01 MTR_3g109840 26.975 367 203 11 68 388 70 417 2.66e-33 129
MsG0880044457.01.T01 MTR_2g016060 27.901 362 201 15 72 388 56 402 1.94e-32 126
MsG0880044457.01.T01 MTR_6g016875 27.072 362 208 13 69 388 62 409 9.44e-32 125
MsG0880044457.01.T01 MTR_7g019120 25.624 441 245 15 1 386 8 420 3.41e-31 123
MsG0880044457.01.T01 MTR_5g035090 28.108 370 191 12 71 388 83 429 4.79e-31 123
MsG0880044457.01.T01 MTR_4g092830 28.297 364 202 15 71 390 48 396 8.20e-31 122
MsG0880044457.01.T01 MTR_8g099300 27.701 361 193 15 71 382 74 415 1.47e-29 119
MsG0880044457.01.T01 MTR_8g093870 27.095 358 205 12 69 386 131 472 1.61e-28 116
MsG0880044457.01.T01 MTR_5g035070 25.606 371 201 10 71 388 87 435 1.96e-28 115
MsG0880044457.01.T01 MTR_4g125060 27.346 373 185 16 69 386 130 471 1.51e-26 110
MsG0880044457.01.T01 MTR_4g125060 27.346 373 185 16 69 386 198 539 2.18e-26 111
MsG0880044457.01.T01 MTR_4g125060 27.346 373 185 16 69 386 169 510 2.53e-26 110
MsG0880044457.01.T01 MTR_6g007777 24.451 364 221 11 65 388 110 459 5.69e-25 106
MsG0880044457.01.T01 MTR_7g019140 33.908 174 93 6 1 163 8 170 1.90e-24 99.0
MsG0880044457.01.T01 MTR_5g069320 26.596 282 145 10 118 379 147 386 3.97e-24 103
MsG0880044457.01.T01 MTR_6g016240 25.543 368 204 14 69 386 69 416 1.94e-23 101
MsG0880044457.01.T01 MTR_5g035120 34.940 166 103 4 1 162 1 165 4.38e-23 95.5
MsG0880044457.01.T01 MTR_2g022580 32.540 126 76 3 132 249 2 126 5.23e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044457.01.T01 AT1G73140 65.865 416 114 3 2 393 1 412 0.0 570
MsG0880044457.01.T01 AT5G01360 46.281 363 165 3 54 386 16 378 7.16e-119 350
MsG0880044457.01.T01 AT5G01360 46.281 363 165 3 54 386 72 434 2.37e-118 351
MsG0880044457.01.T01 AT2G40150 46.409 362 156 4 60 387 64 421 3.16e-117 348
MsG0880044457.01.T01 AT3G55990 46.398 347 158 3 69 387 138 484 2.50e-116 347
MsG0880044457.01.T01 AT2G40320 45.584 351 159 4 66 387 76 423 1.70e-109 328
MsG0880044457.01.T01 AT2G38320 41.745 424 190 9 1 390 8 408 2.01e-104 315
MsG0880044457.01.T01 AT5G01620 43.228 347 165 5 68 386 107 449 3.06e-104 315
MsG0880044457.01.T01 AT5G01620 43.228 347 165 5 68 386 107 449 3.06e-104 315
MsG0880044457.01.T01 AT5G01620 43.228 347 165 5 68 386 115 457 4.39e-104 315
MsG0880044457.01.T01 AT3G11030 44.571 350 165 5 66 387 101 449 1.45e-103 314
MsG0880044457.01.T01 AT2G40160 38.208 424 222 6 4 387 1 424 1.16e-100 306
MsG0880044457.01.T01 AT2G40160 37.972 424 223 6 4 387 1 424 1.35e-100 305
MsG0880044457.01.T01 AT2G38320 43.425 327 151 6 96 390 1 325 1.24e-86 266
MsG0880044457.01.T01 AT3G54260 38.393 336 181 8 71 389 51 377 6.53e-73 233
MsG0880044457.01.T01 AT5G20590 34.746 354 182 10 70 387 140 480 1.56e-68 224
MsG0880044457.01.T01 AT3G62390 36.080 352 186 12 64 387 132 472 1.31e-67 221
MsG0880044457.01.T01 AT2G40160 38.408 289 162 4 4 276 1 289 5.35e-67 215
MsG0880044457.01.T01 AT2G30900 34.582 347 174 11 71 387 43 366 2.23e-66 215
MsG0880044457.01.T01 AT5G58600 34.294 347 187 7 71 387 66 401 8.20e-66 215
MsG0880044457.01.T01 AT3G12060 35.674 356 179 10 69 387 194 536 9.87e-65 216
MsG0880044457.01.T01 AT3G06080 35.854 357 180 9 70 388 102 447 2.73e-64 213
MsG0880044457.01.T01 AT1G78710 32.558 344 181 10 71 387 38 357 1.13e-62 205
MsG0880044457.01.T01 AT5G06700 34.746 354 185 11 69 387 253 595 4.65e-62 210
MsG0880044457.01.T01 AT1G29050 32.782 363 191 9 50 386 43 378 5.45e-62 204
MsG0880044457.01.T01 AT2G31110 35.380 342 171 9 71 386 45 362 1.58e-61 202
MsG0880044457.01.T01 AT5G49340 34.831 356 180 11 71 387 100 442 2.96e-61 204
MsG0880044457.01.T01 AT2G34070 31.728 353 190 8 61 386 55 383 3.45e-61 202
MsG0880044457.01.T01 AT1G60790 32.383 386 199 13 52 388 162 534 2.12e-59 202
MsG0880044457.01.T01 AT1G78710 32.177 317 165 8 71 387 31 297 7.93e-59 194
MsG0880044457.01.T01 AT2G30010 31.467 375 194 11 56 387 43 397 1.21e-58 196
MsG0880044457.01.T01 AT2G30010 31.467 375 194 11 56 387 86 440 2.02e-58 197
MsG0880044457.01.T01 AT5G19160 32.782 363 188 10 70 389 98 447 1.13e-57 195
MsG0880044457.01.T01 AT3G14850 32.565 347 185 9 69 388 32 356 1.60e-57 192
MsG0880044457.01.T01 AT2G42570 34.402 343 175 9 71 387 47 365 4.20e-56 189
MsG0880044457.01.T01 AT5G06230 34.795 365 187 12 67 391 17 370 2.97e-52 179
MsG0880044457.01.T01 AT5G06230 34.795 365 187 12 67 391 58 411 7.64e-52 179
MsG0880044457.01.T01 AT1G48880 30.747 348 190 13 71 388 115 441 4.61e-49 172
MsG0880044457.01.T01 AT3G11570 33.923 339 178 13 88 391 98 425 6.12e-49 171
MsG0880044457.01.T01 AT2G30900 37.264 212 118 7 71 276 43 245 6.51e-45 156
MsG0880044457.01.T01 AT5G20590 36.239 218 126 5 70 276 140 355 8.50e-45 159
MsG0880044457.01.T01 AT2G31110 37.799 209 119 4 71 276 45 245 1.81e-44 155
MsG0880044457.01.T01 AT3G06080 38.249 217 123 4 70 276 102 317 2.79e-44 157
MsG0880044457.01.T01 AT3G62390 36.771 223 127 7 64 276 132 350 2.71e-43 156
MsG0880044457.01.T01 AT5G19160 35.484 217 129 4 70 276 98 313 6.68e-42 150
MsG0880044457.01.T01 AT5G51640 27.532 385 200 14 64 391 131 493 3.10e-40 149
MsG0880044457.01.T01 AT5G58600 35.238 210 125 4 71 276 66 268 7.20e-40 144
MsG0880044457.01.T01 AT4G25360 27.720 386 221 13 58 394 156 532 1.15e-38 145
MsG0880044457.01.T01 AT4G25360 27.720 386 221 13 58 394 156 532 1.15e-38 145
MsG0880044457.01.T01 AT1G70230 28.324 346 209 11 71 388 79 413 1.03e-37 141
MsG0880044457.01.T01 AT5G64470 28.889 360 202 15 71 391 55 399 3.44e-37 139
MsG0880044457.01.T01 AT2G34070 29.412 272 142 7 142 386 1 249 4.97e-35 130
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 116 457 1.26e-34 133
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 192 533 1.78e-34 134
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 210 551 1.99e-34 134
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 210 551 1.99e-34 134
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 210 551 1.99e-34 134
MsG0880044457.01.T01 AT5G20680 28.649 370 184 15 69 386 210 551 1.99e-34 134
MsG0880044457.01.T01 AT5G64470 27.945 365 205 15 71 391 55 405 6.32e-34 130
MsG0880044457.01.T01 AT2G37720 28.809 361 191 13 71 386 143 482 1.37e-33 131
MsG0880044457.01.T01 AT5G64020 28.142 366 199 12 71 386 57 408 2.07e-33 129
MsG0880044457.01.T01 AT3G02440 27.778 360 203 13 71 389 127 470 8.15e-33 129
MsG0880044457.01.T01 AT3G02440 27.778 360 203 13 71 389 135 478 8.85e-33 129
MsG0880044457.01.T01 AT5G06230 34.348 230 132 5 67 279 58 285 4.69e-32 123
MsG0880044457.01.T01 AT5G15890 26.400 375 216 11 50 382 162 518 9.98e-32 126
MsG0880044457.01.T01 AT4G23790 26.009 446 243 19 6 387 6 428 1.49e-31 124
MsG0880044457.01.T01 AT3G14850 29.562 274 145 8 142 388 1 253 4.87e-31 119
MsG0880044457.01.T01 AT3G28150 27.838 370 194 14 66 386 65 410 7.97e-31 122
MsG0880044457.01.T01 AT2G14530 26.757 370 200 13 67 386 58 406 9.28e-31 122
MsG0880044457.01.T01 AT5G15900 27.298 359 206 11 69 386 65 409 3.63e-30 120
MsG0880044457.01.T01 AT4G11090 25.275 364 227 11 62 387 70 426 3.69e-30 120
MsG0880044457.01.T01 AT1G01430 24.181 397 248 10 34 387 62 448 4.59e-30 120
MsG0880044457.01.T01 AT5G15900 27.019 359 207 11 69 386 84 428 5.49e-30 120
MsG0880044457.01.T01 AT4G01080 25.568 352 222 11 63 382 83 426 5.14e-28 114
MsG0880044457.01.T01 AT2G31110 31.466 232 110 8 181 386 6 214 1.17e-22 95.5
MsG0880044457.01.T01 AT5G64470 30.000 190 120 7 71 250 55 241 7.87e-20 90.1
MsG0880044457.01.T01 AT5G64470 30.000 190 120 7 71 250 55 241 8.91e-20 89.7

Find 109 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAATCAGCAAAAGATTT+TGG 0.125911 8:-42393181 None:intergenic
AGAAGTGAATACAATATAAT+TGG 0.171993 8:-42391031 None:intergenic
AGGATTTCATTCCATGTATC+TGG 0.201338 8:-42393226 None:intergenic
AACAAAAGAATGATGTTTAT+TGG 0.212670 8:+42391541 MsG0880044457.01.T01:CDS
CTGATTCTTTCTACACAAAT+TGG 0.217129 8:+42391305 MsG0880044457.01.T01:CDS
GATGCTCACACGTCAGTTTA+TGG 0.226709 8:+42393115 MsG0880044457.01.T01:CDS
CAATACAAGGTTCGTCATAT+TGG 0.230048 8:+42392984 MsG0880044457.01.T01:CDS
TGGAGGGATTTCTTTCCTTC+AGG 0.275411 8:-42391622 None:intergenic
TCTTCATAGGTGGAATTCTT+TGG 0.275642 8:-42391642 None:intergenic
CTGTCGTGACGTTATATTCT+TGG 0.282711 8:-42392460 None:intergenic
AATACAAGGTTCGTCATATT+GGG 0.282741 8:+42392985 MsG0880044457.01.T01:CDS
TTGGCAAGGAGTGGACATTT+TGG 0.310618 8:+42392129 MsG0880044457.01.T01:CDS
GCAATGTATTTGAAGGGAAA+TGG 0.312090 8:+42391194 MsG0880044457.01.T01:CDS
TGCATTCACTGGTGTTTACC+TGG 0.316704 8:+42393199 MsG0880044457.01.T01:CDS
AACAGATCATAGACTCAAAT+TGG 0.319491 8:-42391582 None:intergenic
GCTTGCTCTTCAAGCTATCT+AGG 0.322912 8:-42391078 None:intergenic
TAGATCTCTGTTCTTTAGTC+AGG 0.343380 8:-42393156 None:intergenic
ATTACCAGTTGTCGTGTTGC+CGG 0.351935 8:+42391150 MsG0880044457.01.T01:CDS
ATACTACTGGGCTCCATTCA+TGG 0.353905 8:+42392021 MsG0880044457.01.T01:CDS
TCAACTTTAAATATCTTCAT+AGG 0.360087 8:-42391655 None:intergenic
ATATAATTGGGAAAATTGAT+TGG 0.370417 8:-42391018 None:intergenic
CAATGTATTTGAAGGGAAAT+GGG 0.374415 8:+42391195 MsG0880044457.01.T01:CDS
ATGCAATGATTGAATACTAC+TGG 0.374952 8:+42392008 MsG0880044457.01.T01:CDS
TGCCGAAAATTATATTGTTT+AGG 0.375449 8:-42393525 None:intergenic
CACCTCTACGGCATGTCATC+TGG 0.379461 8:+42391115 MsG0880044457.01.T01:CDS
TTATATTCTTGGACTTCATC+TGG 0.380050 8:-42392449 None:intergenic
ATTTGAGTCTATGATCTGTT+TGG 0.397442 8:+42391585 MsG0880044457.01.T01:CDS
ATAATTGGGTGATGTTCAAT+AGG 0.397627 8:-42393078 None:intergenic
CAATATGACGAACCTTGTAT+TGG 0.400765 8:-42392983 None:intergenic
AGAAGAGAGTTGCCCTTACT+TGG 0.406575 8:+42391249 MsG0880044457.01.T01:CDS
GTGGTCTGCTTGACCAAGTA+AGG 0.408960 8:-42391262 None:intergenic
TTTAGGTTTCCATGAAGAAC+AGG 0.415460 8:-42393508 None:intergenic
TCCTCCGGCAACACGACAAC+TGG 0.420129 8:-42391154 None:intergenic
TCTTAAGCAGATATGCATAT+AGG 0.427943 8:-42393246 None:intergenic
CAAATCATACGGTACATAAA+CGG 0.437106 8:+42392068 MsG0880044457.01.T01:CDS
GAAGTGAATACAATATAATT+GGG 0.442470 8:-42391030 None:intergenic
GAAATTGATTCAACCATGAA+TGG 0.447404 8:-42392034 None:intergenic
TTGGGAAAATTGATTGGATC+CGG 0.452959 8:-42391012 None:intergenic
AATATGACGAACCTTGTATT+GGG 0.455104 8:-42392982 None:intergenic
ACGAGCATCATTCAGATTGA+TGG 0.455552 8:+42393316 MsG0880044457.01.T01:three_prime_UTR
CCCTCCTCAATGCGATCCTC+CGG 0.457796 8:-42391169 None:intergenic
TATTTGAAGGGAAATGGGTA+TGG 0.465084 8:+42391200 MsG0880044457.01.T01:CDS
TTCTAATCTTTGCAGTTACA+AGG 0.466052 8:+42391050 MsG0880044457.01.T01:CDS
CAGACCACTTGCATGAAGAA+TGG 0.466368 8:+42391277 MsG0880044457.01.T01:CDS
GAGGGTTGCAATGTATTTGA+AGG 0.469336 8:+42391187 MsG0880044457.01.T01:CDS
GCATTCACTGGTGTTTACCT+GGG 0.470418 8:+42393200 MsG0880044457.01.T01:CDS
CTCACGTAGCATTGATGAAA+GGG 0.471007 8:-42392183 None:intergenic
AGACCACTTGCATGAAGAAT+GGG 0.475855 8:+42391278 MsG0880044457.01.T01:CDS
AGGAGCTGGGAATGGAAGCC+AGG 0.483811 8:+42392929 MsG0880044457.01.T01:intron
ATCCAAAAGGCAAAAGGTGT+TGG 0.491457 8:-42393391 None:intergenic
CATAGGTGGAATTCTTTGGA+GGG 0.491727 8:-42391638 None:intergenic
GTCAGTTTATGGCGAGCGAA+AGG 0.500532 8:+42393126 MsG0880044457.01.T01:CDS
CAACTCTCTTCTTCATAAAG+AGG 0.502052 8:-42391238 None:intergenic
ATTCTTTCTACACAAATTGG+AGG 0.504866 8:+42391308 MsG0880044457.01.T01:CDS
CATTGATATGAGATGGTTGA+AGG 0.506584 8:-42390963 None:intergenic
TGTTCGAGAGTTATGTTTGG+TGG 0.513573 8:+42392152 MsG0880044457.01.T01:CDS
GCCGGAGGATCGCATTGAGG+AGG 0.515226 8:+42391168 MsG0880044457.01.T01:CDS
TCTTCTCCAGGAGCTGGGAA+TGG 0.516727 8:+42392921 MsG0880044457.01.T01:intron
TATACAATCCAAAAGGCAAA+AGG 0.521640 8:-42393397 None:intergenic
TCATAGGTGGAATTCTTTGG+AGG 0.523486 8:-42391639 None:intergenic
GGATTTCATTCCATGTATCT+GGG 0.524709 8:-42393225 None:intergenic
GAAAAGAAAGCAAAATAGAA+TGG 0.525233 8:-42393369 None:intergenic
TACCTGGGGTCCCAGATACA+TGG 0.530934 8:+42393215 MsG0880044457.01.T01:CDS
AATTGGAGGTGGCAGCCTCA+TGG 0.531507 8:+42391322 MsG0880044457.01.T01:CDS
TTCCATGTATCTGGGACCCC+AGG 0.534611 8:-42393217 None:intergenic
GGTTCGTCATATTGGGGCAC+AGG 0.534995 8:+42392992 MsG0880044457.01.T01:CDS
TCAGTTTATGGCGAGCGAAA+GGG 0.536102 8:+42393127 MsG0880044457.01.T01:CDS
TGGTGTTCGAGAGTTATGTT+TGG 0.536569 8:+42392149 MsG0880044457.01.T01:CDS
GTTCTGTTATACAATCCAAA+AGG 0.542969 8:-42393404 None:intergenic
CATTCACTGGTGTTTACCTG+GGG 0.545869 8:+42393201 MsG0880044457.01.T01:CDS
CTTTCTACACAAATTGGAGG+TGG 0.550918 8:+42391311 MsG0880044457.01.T01:CDS
AACATGTGCAACAATTTCAA+AGG 0.558794 8:-42391514 None:intergenic
GTACAATCTGTAATTCCTGA+AGG 0.559209 8:+42391607 MsG0880044457.01.T01:CDS
TATGAAGATATTTAAAGTTG+AGG 0.563429 8:+42391657 MsG0880044457.01.T01:CDS
TAATTGGGTGATGTTCAATA+GGG 0.568867 8:-42393077 None:intergenic
CCGGAGGATCGCATTGAGGA+GGG 0.569780 8:+42391169 MsG0880044457.01.T01:CDS
ACTCACGTAGCATTGATGAA+AGG 0.570089 8:-42392184 None:intergenic
ACCAGTTGTCGTGTTGCCGG+AGG 0.576740 8:+42391153 MsG0880044457.01.T01:CDS
TCTCCCATTCTTCATGCAAG+TGG 0.577531 8:-42391281 None:intergenic
GCAAATGTACATGTCAAAGG+TGG 0.579152 8:-42393555 None:intergenic
TAGCTAAGCATGGCAAACAT+TGG 0.579693 8:+42392110 MsG0880044457.01.T01:CDS
TGAAATTGTTGCACATGTTG+AGG 0.582269 8:+42391518 MsG0880044457.01.T01:CDS
ATTTGAAGGGAAATGGGTAT+GGG 0.582984 8:+42391201 MsG0880044457.01.T01:CDS
CGTCACGACAGCATATAAGT+TGG 0.586816 8:+42392472 MsG0880044457.01.T01:CDS
AGGGTTGCAATGTATTTGAA+GGG 0.588210 8:+42391188 MsG0880044457.01.T01:CDS
TCAAGTCTTCGATTGATCGC+CGG 0.588728 8:+42390993 MsG0880044457.01.T01:CDS
ACTTTAAATATCTTCATAGG+TGG 0.594287 8:-42391652 None:intergenic
CTCATGGATGCAACCTCCCA+AGG 0.597976 8:+42391338 MsG0880044457.01.T01:CDS
TGGCAAACATTGGCAAGGAG+TGG 0.599503 8:+42392120 MsG0880044457.01.T01:CDS
CTCTTCTTCATAAAGAGGAT+AGG 0.600163 8:-42391233 None:intergenic
ATTGGAGACTCATTACAAAG+AGG 0.601036 8:+42391559 MsG0880044457.01.T01:CDS
TGCAATGATTGAATACTACT+GGG 0.601396 8:+42392009 MsG0880044457.01.T01:CDS
AGATCATGCAACAAATCATA+CGG 0.601570 8:+42392057 MsG0880044457.01.T01:CDS
ACGGCATGTCATCTGGTGGA+AGG 0.604816 8:+42391122 MsG0880044457.01.T01:CDS
CTTGGGAGGTTGCATCCATG+AGG 0.606796 8:-42391337 None:intergenic
CAAATGTACATGTCAAAGGT+GGG 0.612052 8:-42393554 None:intergenic
CTTGACTCAATAGCTAAGCA+TGG 0.612907 8:+42392100 MsG0880044457.01.T01:CDS
CTCTACGGCATGTCATCTGG+TGG 0.617158 8:+42391118 MsG0880044457.01.T01:CDS
AGCATCATTCAGATTGATGG+TGG 0.618010 8:+42393319 MsG0880044457.01.T01:three_prime_UTR
AAAGTGTTGGTTACCTTGGG+AGG 0.620369 8:-42391351 None:intergenic
TCATACGGTACATAAACGGA+TGG 0.623999 8:+42392072 MsG0880044457.01.T01:CDS
CACCAGATGACATGCCGTAG+AGG 0.624305 8:-42391117 None:intergenic
AATGAATCATACCCAATACA+AGG 0.626400 8:+42392971 MsG0880044457.01.T01:CDS
GAGATACAAACTGTAAACAA+AGG 0.634145 8:+42393448 MsG0880044457.01.T01:three_prime_UTR
AAGCATGGCAAACATTGGCA+AGG 0.639024 8:+42392115 MsG0880044457.01.T01:CDS
GAGACAGCATTGATATGAGA+TGG 0.642148 8:-42390970 None:intergenic
TGGTCTGCTTGACCAAGTAA+GGG 0.642359 8:-42391261 None:intergenic
ATACAAGGTTCGTCATATTG+GGG 0.647384 8:+42392986 MsG0880044457.01.T01:CDS
GTTGCCGGAGGATCGCATTG+AGG 0.666005 8:+42391165 MsG0880044457.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACAAAAAAAACTAT+AGG - Chr8:42392279-42392298 None:intergenic 10.0%
!!! TTCAATTTTTTATTTTATTC+TGG + Chr8:42392858-42392877 MsG0880044457.01.T01:intron 10.0%
!!! TTGTTTTTTTTTTTGAATAA+TGG + Chr8:42392289-42392308 MsG0880044457.01.T01:intron 10.0%
!!! AACCTAAACAATATAATTTT+CGG + Chr8:42393523-42393542 MsG0880044457.01.T01:three_prime_UTR 15.0%
!! AACAAAAGAATGATGTTTAT+TGG + Chr8:42391541-42391560 MsG0880044457.01.T01:CDS 20.0%
!! AATCAGACAAATTATTGAAT+TGG + Chr8:42392394-42392413 MsG0880044457.01.T01:intron 20.0%
!! AGAAGTGAATACAATATAAT+TGG - Chr8:42391034-42391053 None:intergenic 20.0%
!! ATATAATTGGGAAAATTGAT+TGG - Chr8:42391021-42391040 None:intergenic 20.0%
!! GAAGTGAATACAATATAATT+GGG - Chr8:42391033-42391052 None:intergenic 20.0%
!! TCAACTTTAAATATCTTCAT+AGG - Chr8:42391658-42391677 None:intergenic 20.0%
!! TTAAGTTATTTATGAAAGCA+TGG - Chr8:42391726-42391745 None:intergenic 20.0%
!!! AAAAATACATTTTGAGTAAG+TGG - Chr8:42392539-42392558 None:intergenic 20.0%
!!! ATTATCAAGTTTTGCTAATA+AGG + Chr8:42392631-42392650 MsG0880044457.01.T01:intron 20.0%
!!! CATTTTTTTAAGTTCACAAT+CGG - Chr8:42391414-42391433 None:intergenic 20.0%
!!! TATGAAGATATTTAAAGTTG+AGG + Chr8:42391657-42391676 MsG0880044457.01.T01:CDS 20.0%
! ACTTTAAATATCTTCATAGG+TGG - Chr8:42391655-42391674 None:intergenic 25.0%
! GAAAAGAAAGCAAAATAGAA+TGG - Chr8:42393372-42393391 None:intergenic 25.0%
! GACATAAATATTTGTGAGAT+TGG - Chr8:42391855-42391874 None:intergenic 25.0%
! TGCCGAAAATTATATTGTTT+AGG - Chr8:42393528-42393547 None:intergenic 25.0%
!! TATCAAAACTTTTCTTAACG+TGG + Chr8:42393271-42393290 MsG0880044457.01.T01:exon 25.0%
!! TGAGTATATCTATAGACTTT+TGG + Chr8:42392202-42392221 MsG0880044457.01.T01:intron 25.0%
!! TTTTCTGTACTCTGATAATT+GGG - Chr8:42393095-42393114 None:intergenic 25.0%
!!! AAATTCCTATAGCTTTGTTT+TGG + Chr8:42391975-42391994 MsG0880044457.01.T01:intron 25.0%
!!! AACATGTTTTATTCCAGATA+TGG + Chr8:42392422-42392441 MsG0880044457.01.T01:intron 25.0%
!!! AAGAATTTATTTTCTTCTCC+AGG + Chr8:42392909-42392928 MsG0880044457.01.T01:intron 25.0%
AAACATTCACCAAATCATGT+GGG - Chr8:42392717-42392736 None:intergenic 30.0%
AACAGATCATAGACTCAAAT+TGG - Chr8:42391585-42391604 None:intergenic 30.0%
AACATGTGCAACAATTTCAA+AGG - Chr8:42391517-42391536 None:intergenic 30.0%
AATACAAGGTTCGTCATATT+GGG + Chr8:42392985-42393004 MsG0880044457.01.T01:CDS 30.0%
AATATGACGAACCTTGTATT+GGG - Chr8:42392985-42393004 None:intergenic 30.0%
AATGAATCATACCCAATACA+AGG + Chr8:42392971-42392990 MsG0880044457.01.T01:CDS 30.0%
AGATCATGCAACAAATCATA+CGG + Chr8:42392057-42392076 MsG0880044457.01.T01:CDS 30.0%
AGTACTTCAATGAATGTTCA+TGG + Chr8:42392247-42392266 MsG0880044457.01.T01:intron 30.0%
ATAATTGGGTGATGTTCAAT+AGG - Chr8:42393081-42393100 None:intergenic 30.0%
ATGCAATGATTGAATACTAC+TGG + Chr8:42392008-42392027 MsG0880044457.01.T01:CDS 30.0%
ATTCTTTCTACACAAATTGG+AGG + Chr8:42391308-42391327 MsG0880044457.01.T01:CDS 30.0%
ATTTGAGTCTATGATCTGTT+TGG + Chr8:42391585-42391604 MsG0880044457.01.T01:CDS 30.0%
CAAATCATACGGTACATAAA+CGG + Chr8:42392068-42392087 MsG0880044457.01.T01:CDS 30.0%
CAATGTATTTGAAGGGAAAT+GGG + Chr8:42391195-42391214 MsG0880044457.01.T01:CDS 30.0%
CTGAAGTCAAGAAAAGAATA+AGG - Chr8:42391487-42391506 None:intergenic 30.0%
CTGATTCTTTCTACACAAAT+TGG + Chr8:42391305-42391324 MsG0880044457.01.T01:CDS 30.0%
GAGATACAAACTGTAAACAA+AGG + Chr8:42393448-42393467 MsG0880044457.01.T01:three_prime_UTR 30.0%
GTTCTGTTATACAATCCAAA+AGG - Chr8:42393407-42393426 None:intergenic 30.0%
TAATTGGGTGATGTTCAATA+GGG - Chr8:42393080-42393099 None:intergenic 30.0%
TATACAATCCAAAAGGCAAA+AGG - Chr8:42393400-42393419 None:intergenic 30.0%
TCTTAAGCAGATATGCATAT+AGG - Chr8:42393249-42393268 None:intergenic 30.0%
TGCAATGATTGAATACTACT+GGG + Chr8:42392009-42392028 MsG0880044457.01.T01:CDS 30.0%
TTATATTCTTGGACTTCATC+TGG - Chr8:42392452-42392471 None:intergenic 30.0%
TTCTAATCTTTGCAGTTACA+AGG + Chr8:42391050-42391069 MsG0880044457.01.T01:CDS 30.0%
! ATAAGTTGGCGTTAAAAACA+TGG + Chr8:42392486-42392505 MsG0880044457.01.T01:CDS 30.0%
! ATGCAATCAGCAAAAGATTT+TGG - Chr8:42393184-42393203 None:intergenic 30.0%
! CTTATTCTTTTCTTGACTTC+AGG + Chr8:42391485-42391504 MsG0880044457.01.T01:intron 30.0%
! CTTTTCTGTACTCTGATAAT+TGG - Chr8:42393096-42393115 None:intergenic 30.0%
! GAAATTGATTCAACCATGAA+TGG - Chr8:42392037-42392056 None:intergenic 30.0%
! GTTCAAATGTGAAAAAGTGT+TGG - Chr8:42391367-42391386 None:intergenic 30.0%
! TAAGTTGGCGTTAAAAACAT+GGG + Chr8:42392487-42392506 MsG0880044457.01.T01:CDS 30.0%
! TATATCTATAGACTTTTGGC+TGG + Chr8:42392206-42392225 MsG0880044457.01.T01:intron 30.0%
! TGCAATCAGCAAAAGATTTT+GGG - Chr8:42393183-42393202 None:intergenic 30.0%
!! ATACATTTTGAGTAAGTGGT+TGG - Chr8:42392535-42392554 None:intergenic 30.0%
AGGATTTCATTCCATGTATC+TGG - Chr8:42393229-42393248 None:intergenic 35.0%
AGGGTTGCAATGTATTTGAA+GGG + Chr8:42391188-42391207 MsG0880044457.01.T01:CDS 35.0%
ATACAAGGTTCGTCATATTG+GGG + Chr8:42392986-42393005 MsG0880044457.01.T01:CDS 35.0%
ATTGGAGACTCATTACAAAG+AGG + Chr8:42391559-42391578 MsG0880044457.01.T01:CDS 35.0%
ATTTGAAGGGAAATGGGTAT+GGG + Chr8:42391201-42391220 MsG0880044457.01.T01:CDS 35.0%
CAAACATTCACCAAATCATG+TGG - Chr8:42392718-42392737 None:intergenic 35.0%
CAACTCTCTTCTTCATAAAG+AGG - Chr8:42391241-42391260 None:intergenic 35.0%
CAATACAAGGTTCGTCATAT+TGG + Chr8:42392984-42393003 MsG0880044457.01.T01:CDS 35.0%
CAATATGACGAACCTTGTAT+TGG - Chr8:42392986-42393005 None:intergenic 35.0%
CATTGATATGAGATGGTTGA+AGG - Chr8:42390966-42390985 None:intergenic 35.0%
CGGAAATCTAAGAGTAATCA+AGG - Chr8:42391394-42391413 None:intergenic 35.0%
CGTTAAAAACATGGGCAAAT+TGG + Chr8:42392495-42392514 MsG0880044457.01.T01:CDS 35.0%
CTCTTCTTCATAAAGAGGAT+AGG - Chr8:42391236-42391255 None:intergenic 35.0%
GCAATGTATTTGAAGGGAAA+TGG + Chr8:42391194-42391213 MsG0880044457.01.T01:CDS 35.0%
GCAGAGTCACTCTTTAAATT+TGG - Chr8:42392677-42392696 None:intergenic 35.0%
GGATTTCATTCCATGTATCT+GGG - Chr8:42393228-42393247 None:intergenic 35.0%
GTAACTTACCACAAATGTGT+TGG - Chr8:42392575-42392594 None:intergenic 35.0%
GTACAATCTGTAATTCCTGA+AGG + Chr8:42391607-42391626 MsG0880044457.01.T01:CDS 35.0%
TAGATCTCTGTTCTTTAGTC+AGG - Chr8:42393159-42393178 None:intergenic 35.0%
TATTTGAAGGGAAATGGGTA+TGG + Chr8:42391200-42391219 MsG0880044457.01.T01:CDS 35.0%
TCTTCATAGGTGGAATTCTT+TGG - Chr8:42391645-42391664 None:intergenic 35.0%
TGAAATTGTTGCACATGTTG+AGG + Chr8:42391518-42391537 MsG0880044457.01.T01:CDS 35.0%
TTGGGAAAATTGATTGGATC+CGG - Chr8:42391015-42391034 None:intergenic 35.0%
! GTTGTCGAAAAAGCACAAAA+TGG + Chr8:42392324-42392343 MsG0880044457.01.T01:intron 35.0%
! TTTAGGTTTCCATGAAGAAC+AGG - Chr8:42393511-42393530 None:intergenic 35.0%
!! GAAAAAGTGTTGGTTACCTT+GGG - Chr8:42391357-42391376 None:intergenic 35.0%
!! TGAAAAAGTGTTGGTTACCT+TGG - Chr8:42391358-42391377 None:intergenic 35.0%
!! TGATTTTAGCCTGTTCTTCA+TGG + Chr8:42393499-42393518 MsG0880044457.01.T01:three_prime_UTR 35.0%
!!! TGTGCTTTTTCGACAACTAT+AGG - Chr8:42392321-42392340 None:intergenic 35.0%
AAAGTGAAGCCCACATGATT+TGG + Chr8:42392705-42392724 MsG0880044457.01.T01:intron 40.0%
ACGAGCATCATTCAGATTGA+TGG + Chr8:42393316-42393335 MsG0880044457.01.T01:three_prime_UTR 40.0%
AGACCACTTGCATGAAGAAT+GGG + Chr8:42391278-42391297 MsG0880044457.01.T01:CDS 40.0%
AGCATCATTCAGATTGATGG+TGG + Chr8:42393319-42393338 MsG0880044457.01.T01:three_prime_UTR 40.0%
CATAGGTGGAATTCTTTGGA+GGG - Chr8:42391641-42391660 None:intergenic 40.0%
CTGTCGTGACGTTATATTCT+TGG - Chr8:42392463-42392482 None:intergenic 40.0%
CTTGACTCAATAGCTAAGCA+TGG + Chr8:42392100-42392119 MsG0880044457.01.T01:CDS 40.0%
CTTTCTACACAAATTGGAGG+TGG + Chr8:42391311-42391330 MsG0880044457.01.T01:CDS 40.0%
GAGGGTTGCAATGTATTTGA+AGG + Chr8:42391187-42391206 MsG0880044457.01.T01:CDS 40.0%
GTATGTCTCCAACACATTTG+TGG + Chr8:42392564-42392583 MsG0880044457.01.T01:intron 40.0%
TAGCTAAGCATGGCAAACAT+TGG + Chr8:42392110-42392129 MsG0880044457.01.T01:CDS 40.0%
TCATACGGTACATAAACGGA+TGG + Chr8:42392072-42392091 MsG0880044457.01.T01:CDS 40.0%
TCATAGGTGGAATTCTTTGG+AGG - Chr8:42391642-42391661 None:intergenic 40.0%
TCCTGCCAAAACAAAGCTAT+AGG - Chr8:42391983-42392002 None:intergenic 40.0%
TGGTGTTCGAGAGTTATGTT+TGG + Chr8:42392149-42392168 MsG0880044457.01.T01:CDS 40.0%
TGTTCGAGAGTTATGTTTGG+TGG + Chr8:42392152-42392171 MsG0880044457.01.T01:CDS 40.0%
TTCATCTGGTGATCCATATC+TGG - Chr8:42392438-42392457 None:intergenic 40.0%
! AAGCAGTTTTCATCACTTCC+TGG - Chr8:42392950-42392969 None:intergenic 40.0%
! AGCCATGTTTTTCACCTCTA+CGG + Chr8:42391103-42391122 MsG0880044457.01.T01:CDS 40.0%
! ATCCAAAAGGCAAAAGGTGT+TGG - Chr8:42393394-42393413 None:intergenic 40.0%
! TATTTTCTTCTCCAGGAGCT+GGG + Chr8:42392916-42392935 MsG0880044457.01.T01:intron 40.0%
! TTATTTTCTTCTCCAGGAGC+TGG + Chr8:42392915-42392934 MsG0880044457.01.T01:intron 40.0%
! TTCCAACACCTTTTGCCTTT+TGG + Chr8:42393389-42393408 MsG0880044457.01.T01:three_prime_UTR 40.0%
!! ACTCACGTAGCATTGATGAA+AGG - Chr8:42392187-42392206 None:intergenic 40.0%
!! CTCACGTAGCATTGATGAAA+GGG - Chr8:42392186-42392205 None:intergenic 40.0%
!! CTTTTGCTGATTGCATTCAC+TGG + Chr8:42393188-42393207 MsG0880044457.01.T01:CDS 40.0%
!! GAAGTACTGAACTATGCTCA+CGG - Chr8:42392235-42392254 None:intergenic 40.0%
!! GAGACAGCATTGATATGAGA+TGG - Chr8:42390973-42390992 None:intergenic 40.0%
!!! TCCTATAGCTTTGTTTTGGC+AGG + Chr8:42391979-42391998 MsG0880044457.01.T01:intron 40.0%
AAGCATGGCAAACATTGGCA+AGG + Chr8:42392115-42392134 MsG0880044457.01.T01:CDS 45.0%
AGAAGAGAGTTGCCCTTACT+TGG + Chr8:42391249-42391268 MsG0880044457.01.T01:CDS 45.0%
ATACTACTGGGCTCCATTCA+TGG + Chr8:42392021-42392040 MsG0880044457.01.T01:CDS 45.0%
ATTACCAGTTGTCGTGTTGC+CGG + Chr8:42391150-42391169 MsG0880044457.01.T01:CDS 45.0%
CAGACCACTTGCATGAAGAA+TGG + Chr8:42391277-42391296 MsG0880044457.01.T01:CDS 45.0%
CATTCACTGGTGTTTACCTG+GGG + Chr8:42393201-42393220 MsG0880044457.01.T01:CDS 45.0%
CGTCACGACAGCATATAAGT+TGG + Chr8:42392472-42392491 MsG0880044457.01.T01:CDS 45.0%
GATGCTCACACGTCAGTTTA+TGG + Chr8:42393115-42393134 MsG0880044457.01.T01:CDS 45.0%
GCATTCACTGGTGTTTACCT+GGG + Chr8:42393200-42393219 MsG0880044457.01.T01:CDS 45.0%
GCTTGCTCTTCAAGCTATCT+AGG - Chr8:42391081-42391100 None:intergenic 45.0%
TCAAGTCTTCGATTGATCGC+CGG + Chr8:42390993-42391012 MsG0880044457.01.T01:CDS 45.0%
TCAGTTTATGGCGAGCGAAA+GGG + Chr8:42393127-42393146 MsG0880044457.01.T01:CDS 45.0%
TCTCCCATTCTTCATGCAAG+TGG - Chr8:42391284-42391303 None:intergenic 45.0%
TGCATTCACTGGTGTTTACC+TGG + Chr8:42393199-42393218 MsG0880044457.01.T01:CDS 45.0%
TGCCGTAGAGGTGAAAAACA+TGG - Chr8:42391108-42391127 None:intergenic 45.0%
TGGAGGGATTTCTTTCCTTC+AGG - Chr8:42391625-42391644 None:intergenic 45.0%
TGGTCTGCTTGACCAAGTAA+GGG - Chr8:42391264-42391283 None:intergenic 45.0%
! TTGGCAAGGAGTGGACATTT+TGG + Chr8:42392129-42392148 MsG0880044457.01.T01:CDS 45.0%
!! AAAGTGTTGGTTACCTTGGG+AGG - Chr8:42391354-42391373 None:intergenic 45.0%
GTCAGTTTATGGCGAGCGAA+AGG + Chr8:42393126-42393145 MsG0880044457.01.T01:CDS 50.0%
GTGGTCTGCTTGACCAAGTA+AGG - Chr8:42391265-42391284 None:intergenic 50.0%
TGGCAAACATTGGCAAGGAG+TGG + Chr8:42392120-42392139 MsG0880044457.01.T01:CDS 50.0%
! GATGCTCGTGCTTTTCTGTC+AGG - Chr8:42393305-42393324 None:intergenic 50.0%
AATTGGAGGTGGCAGCCTCA+TGG + Chr8:42391322-42391341 MsG0880044457.01.T01:CDS 55.0%
ACGGCATGTCATCTGGTGGA+AGG + Chr8:42391122-42391141 MsG0880044457.01.T01:CDS 55.0%
CACCAGATGACATGCCGTAG+AGG - Chr8:42391120-42391139 None:intergenic 55.0%
CACCTCTACGGCATGTCATC+TGG + Chr8:42391115-42391134 MsG0880044457.01.T01:CDS 55.0%
CTCATGGATGCAACCTCCCA+AGG + Chr8:42391338-42391357 MsG0880044457.01.T01:CDS 55.0%
CTCTACGGCATGTCATCTGG+TGG + Chr8:42391118-42391137 MsG0880044457.01.T01:CDS 55.0%
CTTGGGAGGTTGCATCCATG+AGG - Chr8:42391340-42391359 None:intergenic 55.0%
GGTTCGTCATATTGGGGCAC+AGG + Chr8:42392992-42393011 MsG0880044457.01.T01:CDS 55.0%
TACCTGGGGTCCCAGATACA+TGG + Chr8:42393215-42393234 MsG0880044457.01.T01:CDS 55.0%
TCGGCAAGCAATCCCACCTT+TGG + Chr8:42393542-42393561 MsG0880044457.01.T01:three_prime_UTR 55.0%
TCTTCTCCAGGAGCTGGGAA+TGG + Chr8:42392921-42392940 MsG0880044457.01.T01:intron 55.0%
! TTCCATGTATCTGGGACCCC+AGG - Chr8:42393220-42393239 None:intergenic 55.0%
ACCAGTTGTCGTGTTGCCGG+AGG + Chr8:42391153-42391172 MsG0880044457.01.T01:CDS 60.0%
AGGAGCTGGGAATGGAAGCC+AGG + Chr8:42392929-42392948 MsG0880044457.01.T01:intron 60.0%
CCCTCCTCAATGCGATCCTC+CGG - Chr8:42391172-42391191 None:intergenic 60.0%
CCGGAGGATCGCATTGAGGA+GGG + Chr8:42391169-42391188 MsG0880044457.01.T01:CDS 60.0%
GTTGCCGGAGGATCGCATTG+AGG + Chr8:42391165-42391184 MsG0880044457.01.T01:CDS 60.0%
TCCTCCGGCAACACGACAAC+TGG - Chr8:42391157-42391176 None:intergenic 60.0%
TGGCTTCCATTCCCAGCTCC+TGG - Chr8:42392930-42392949 None:intergenic 60.0%
GCCGGAGGATCGCATTGAGG+AGG + Chr8:42391168-42391187 MsG0880044457.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 42390924 42393563 42390924 ID=MsG0880044457.01;Name=MsG0880044457.01
Chr8 mRNA 42390924 42393563 42390924 ID=MsG0880044457.01.T01;Parent=MsG0880044457.01;Name=MsG0880044457.01.T01;_AED=0.24;_eAED=0.24;_QI=59|0.75|0.8|1|1|1|5|275|394
Chr8 exon 42390924 42391359 42390924 ID=MsG0880044457.01.T01:exon:7963;Parent=MsG0880044457.01.T01
Chr8 exon 42391507 42391678 42391507 ID=MsG0880044457.01.T01:exon:7964;Parent=MsG0880044457.01.T01
Chr8 exon 42392001 42392200 42392001 ID=MsG0880044457.01.T01:exon:7965;Parent=MsG0880044457.01.T01
Chr8 exon 42392439 42392516 42392439 ID=MsG0880044457.01.T01:exon:7966;Parent=MsG0880044457.01.T01
Chr8 exon 42392931 42393563 42392931 ID=MsG0880044457.01.T01:exon:7967;Parent=MsG0880044457.01.T01
Chr8 five_prime_UTR 42390924 42390982 42390924 ID=MsG0880044457.01.T01:five_prime_utr;Parent=MsG0880044457.01.T01
Chr8 CDS 42390983 42391359 42390983 ID=MsG0880044457.01.T01:cds;Parent=MsG0880044457.01.T01
Chr8 CDS 42391507 42391678 42391507 ID=MsG0880044457.01.T01:cds;Parent=MsG0880044457.01.T01
Chr8 CDS 42392001 42392200 42392001 ID=MsG0880044457.01.T01:cds;Parent=MsG0880044457.01.T01
Chr8 CDS 42392439 42392516 42392439 ID=MsG0880044457.01.T01:cds;Parent=MsG0880044457.01.T01
Chr8 CDS 42392931 42393288 42392931 ID=MsG0880044457.01.T01:cds;Parent=MsG0880044457.01.T01
Chr8 three_prime_UTR 42393289 42393563 42393289 ID=MsG0880044457.01.T01:three_prime_utr;Parent=MsG0880044457.01.T01
Gene Sequence

>MsG0880044457.01.T01

ATGCTGTCTCTCAAGTCTTCGATTGATCGCCGGATCCAATCAATTTTCCCAATTATATTGTATTCACTTCTAATCTTTGCAGTTACAAGGTTAGTCCTAGATAGCTTGAAGAGCAAGCAAAGCCATGTTTTTCACCTCTACGGCATGTCATCTGGTGGAAGGAATCGATTACCAGTTGTCGTGTTGCCGGAGGATCGCATTGAGGAGGGTTGCAATGTATTTGAAGGGAAATGGGTATGGGATAATGTGTCCTATCCTCTTTATGAAGAAGAGAGTTGCCCTTACTTGGTCAAGCAGACCACTTGCATGAAGAATGGGAGATCTGATTCTTTCTACACAAATTGGAGGTGGCAGCCTCATGGATGCAACCTCCCAAGGTTTGATCCTTTGAAATTGTTGCACATGTTGAGGAACAAAAGAATGATGTTTATTGGAGACTCATTACAAAGAGGCCAATTTGAGTCTATGATCTGTTTGGTACAATCTGTAATTCCTGAAGGAAAGAAATCCCTCCAAAGAATTCCACCTATGAAGATATTTAAAGTTGAGGAGTTTAATGCAATGATTGAATACTACTGGGCTCCATTCATGGTTGAATCAATTTCAGATCATGCAACAAATCATACGGTACATAAACGGATGGTGATGCTTGACTCAATAGCTAAGCATGGCAAACATTGGCAAGGAGTGGACATTTTGGTGTTCGAGAGTTATGTTTGGTGGATGCACAGCCCTTTCATCAATGCTACATATGGATCACCAGATGAAGTCCAAGAATATAACGTCACGACAGCATATAAGTTGGCGTTAAAAACATGGGCAAATTGGAGCTGGGAATGGAAGCCAGGAAGTGATGAAAACTGCTTCAATGAATCATACCCAATACAAGGTTCGTCATATTGGGGCACAGGCTCGAATCTTGAGATTATGAAGATATTACATGATTCACTACAAGAACTAAAAATAGATGTCACCCTATTGAACATCACCCAATTATCAGAGTACAGAAAAGATGCTCACACGTCAGTTTATGGCGAGCGAAAGGGCAAGCTCCTGACTAAAGAACAGAGATCTAACCCAAAATCTTTTGCTGATTGCATTCACTGGTGTTTACCTGGGGTCCCAGATACATGGAATGAAATCCTATATGCATATCTGCTTAAGAACTATCAAAACTTTTCTTAA
Protein sequence

>MsG0880044457.01.T01

MLSLKSSIDRRIQSIFPIILYSLLIFAVTRLVLDSLKSKQSHVFHLYGMSSGGRNRLPVVVLPEDRIEEGCNVFEGKWVWDNVSYPLYEEESCPYLVKQTTCMKNGRSDSFYTNWRWQPHGCNLPRFDPLKLLHMLRNKRMMFIGDSLQRGQFESMICLVQSVIPEGKKSLQRIPPMKIFKVEEFNAMIEYYWAPFMVESISDHATNHTVHKRMVMLDSIAKHGKHWQGVDILVFESYVWWMHSPFINATYGSPDEVQEYNVTTAYKLALKTWANWSWEWKPGSDENCFNESYPIQGSSYWGTGSNLEIMKILHDSLQELKIDVTLLNITQLSEYRKDAHTSVYGERKGKLLTKEQRSNPKSFADCIHWCLPGVPDTWNEILYAYLLKNYQNFS*