Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045278.01.T01 | XP_003628937.2 | 94.842 | 601 | 26 | 2 | 1 | 601 | 1 | 596 | 0 | 1109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045278.01.T01 | Q9C9V6 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180006054.01 | MsG0880045278.01 | 0.839548 | 1.483555e-57 | 2.055498e-54 |
| MsG0780040576.01 | MsG0880045278.01 | -0.814805 | 1.277939e-51 | 8.660222e-49 |
| MsG0880041861.01 | MsG0880045278.01 | 0.800823 | 1.203010e-48 | 5.656347e-46 |
| MsG0880043157.01 | MsG0880045278.01 | 0.807910 | 4.012774e-50 | 2.262558e-47 |
| MsG0280011272.01 | MsG0880045278.01 | -0.810656 | 1.034060e-50 | 6.269657e-48 |
| MsG0480023251.01 | MsG0880045278.01 | 0.829312 | 5.522252e-55 | 5.632263e-52 |
| MsG0480023488.01 | MsG0880045278.01 | 0.809286 | 2.040090e-50 | 1.192962e-47 |
| MsG0380016285.01 | MsG0880045278.01 | 0.813214 | 2.867186e-51 | 1.860876e-48 |
| MsG0380017220.01 | MsG0880045278.01 | 0.803944 | 2.737019e-49 | 1.393516e-46 |
| MsG0480018183.01 | MsG0880045278.01 | 0.812810 | 3.515182e-51 | 2.256820e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045278.01.T01 | MTR_8g069330 | 94.842 | 601 | 26 | 2 | 1 | 601 | 1 | 596 | 0.0 | 1109 |
| MsG0880045278.01.T01 | MTR_5g032780 | 70.312 | 640 | 147 | 10 | 1 | 601 | 1 | 636 | 0.0 | 848 |
| MsG0880045278.01.T01 | MTR_4g134210 | 46.139 | 505 | 227 | 6 | 1 | 488 | 1 | 477 | 5.07e-146 | 436 |
| MsG0880045278.01.T01 | MTR_5g015790 | 42.405 | 632 | 286 | 15 | 1 | 593 | 1 | 593 | 1.86e-145 | 435 |
| MsG0880045278.01.T01 | MTR_1g106430 | 41.308 | 627 | 295 | 15 | 1 | 593 | 1 | 588 | 4.02e-144 | 431 |
| MsG0880045278.01.T01 | MTR_1g014070 | 40.960 | 625 | 302 | 13 | 1 | 601 | 1 | 582 | 3.55e-138 | 416 |
| MsG0880045278.01.T01 | MTR_2g027410 | 45.842 | 493 | 232 | 7 | 1 | 486 | 1 | 465 | 1.59e-136 | 410 |
| MsG0880045278.01.T01 | MTR_2g009340 | 40.109 | 551 | 242 | 9 | 5 | 489 | 23 | 551 | 4.51e-123 | 379 |
| MsG0880045278.01.T01 | MTR_4g093850 | 39.362 | 564 | 260 | 12 | 5 | 507 | 23 | 565 | 2.92e-120 | 371 |
| MsG0880045278.01.T01 | MTR_2g027410 | 45.000 | 420 | 197 | 6 | 74 | 486 | 1 | 393 | 1.60e-110 | 340 |
| MsG0880045278.01.T01 | MTR_8g090220 | 36.025 | 483 | 268 | 7 | 20 | 482 | 46 | 507 | 6.58e-99 | 311 |
| MsG0880045278.01.T01 | MTR_8g090220 | 35.542 | 498 | 269 | 8 | 20 | 486 | 46 | 522 | 1.81e-97 | 311 |
| MsG0880045278.01.T01 | MTR_2g018750 | 37.931 | 522 | 264 | 10 | 1 | 486 | 1 | 498 | 2.19e-97 | 310 |
| MsG0880045278.01.T01 | MTR_1g064360 | 35.609 | 542 | 297 | 11 | 1 | 519 | 1 | 513 | 1.68e-93 | 298 |
| MsG0880045278.01.T01 | MTR_1g094850 | 35.352 | 512 | 287 | 8 | 1 | 486 | 1 | 494 | 2.43e-91 | 294 |
| MsG0880045278.01.T01 | MTR_4g093850 | 37.014 | 489 | 229 | 11 | 5 | 435 | 23 | 490 | 3.01e-90 | 289 |
| MsG0880045278.01.T01 | MTR_5g016060 | 35.907 | 518 | 272 | 13 | 21 | 511 | 35 | 519 | 8.58e-90 | 290 |
| MsG0880045278.01.T01 | MTR_2g084595 | 34.843 | 508 | 272 | 9 | 13 | 484 | 10 | 494 | 3.53e-89 | 289 |
| MsG0880045278.01.T01 | MTR_7g073980 | 35.258 | 485 | 270 | 10 | 22 | 486 | 29 | 489 | 2.11e-87 | 285 |
| MsG0880045278.01.T01 | MTR_4g022330 | 37.209 | 516 | 279 | 10 | 25 | 520 | 33 | 523 | 2.25e-86 | 281 |
| MsG0880045278.01.T01 | MTR_1g088885 | 34.892 | 556 | 315 | 13 | 24 | 558 | 34 | 563 | 3.09e-85 | 278 |
| MsG0880045278.01.T01 | MTR_7g108290 | 37.628 | 489 | 269 | 11 | 24 | 492 | 34 | 506 | 1.13e-82 | 273 |
| MsG0880045278.01.T01 | MTR_8g078900 | 32.668 | 551 | 287 | 11 | 23 | 509 | 17 | 547 | 1.23e-82 | 273 |
| MsG0880045278.01.T01 | MTR_2g048390 | 36.287 | 474 | 241 | 9 | 1 | 435 | 1 | 452 | 4.15e-81 | 263 |
| MsG0880045278.01.T01 | MTR_8g078900 | 33.084 | 535 | 274 | 11 | 39 | 509 | 3 | 517 | 4.49e-80 | 265 |
| MsG0880045278.01.T01 | MTR_4g095430 | 34.211 | 494 | 285 | 9 | 23 | 500 | 10 | 479 | 2.38e-79 | 262 |
| MsG0880045278.01.T01 | MTR_8g078900 | 33.951 | 486 | 256 | 9 | 69 | 509 | 42 | 507 | 2.16e-77 | 258 |
| MsG0880045278.01.T01 | MTR_3g062540 | 33.597 | 506 | 274 | 11 | 21 | 506 | 19 | 482 | 2.39e-73 | 245 |
| MsG0880045278.01.T01 | MTR_1g082690 | 32.421 | 475 | 252 | 10 | 27 | 485 | 59 | 480 | 8.35e-71 | 238 |
| MsG0880045278.01.T01 | MTR_5g075640 | 32.525 | 495 | 271 | 8 | 21 | 491 | 20 | 475 | 8.28e-70 | 236 |
| MsG0880045278.01.T01 | MTR_2g084595 | 32.680 | 459 | 250 | 9 | 13 | 435 | 10 | 445 | 6.66e-68 | 228 |
| MsG0880045278.01.T01 | MTR_3g062540 | 33.056 | 481 | 260 | 11 | 46 | 506 | 2 | 440 | 4.15e-65 | 222 |
| MsG0880045278.01.T01 | MTR_5g075640 | 32.128 | 470 | 256 | 8 | 46 | 491 | 2 | 432 | 2.13e-62 | 215 |
| MsG0880045278.01.T01 | MTR_5g016060 | 33.563 | 435 | 230 | 12 | 104 | 511 | 3 | 405 | 7.15e-61 | 211 |
| MsG0880045278.01.T01 | MTR_8g078900 | 31.049 | 467 | 248 | 10 | 23 | 435 | 17 | 463 | 1.28e-58 | 203 |
| MsG0880045278.01.T01 | MTR_8g078900 | 32.338 | 402 | 217 | 8 | 69 | 435 | 42 | 423 | 4.29e-53 | 187 |
| MsG0880045278.01.T01 | MTR_4g011530 | 33.133 | 332 | 172 | 5 | 170 | 486 | 17 | 313 | 2.10e-48 | 175 |
| MsG0880045278.01.T01 | MTR_2g102730 | 34.098 | 305 | 149 | 5 | 199 | 486 | 24 | 293 | 1.56e-43 | 161 |
| MsG0880045278.01.T01 | MTR_4g074190 | 24.554 | 505 | 294 | 11 | 27 | 486 | 4 | 466 | 1.04e-38 | 150 |
| MsG0880045278.01.T01 | MTR_4g074190 | 24.401 | 459 | 265 | 8 | 69 | 486 | 3 | 420 | 6.51e-37 | 144 |
| MsG0880045278.01.T01 | MTR_1g035720 | 26.230 | 488 | 271 | 15 | 39 | 484 | 17 | 457 | 2.59e-35 | 140 |
| MsG0880045278.01.T01 | MTR_4g045767 | 26.411 | 443 | 253 | 11 | 69 | 486 | 48 | 442 | 6.16e-34 | 136 |
| MsG0880045278.01.T01 | MTR_4g074190 | 23.684 | 456 | 261 | 11 | 27 | 437 | 4 | 417 | 1.57e-29 | 122 |
| MsG0880045278.01.T01 | MTR_1g105870 | 34.759 | 187 | 118 | 2 | 33 | 218 | 38 | 221 | 1.09e-26 | 110 |
| MsG0880045278.01.T01 | MTR_4g080720 | 56.250 | 64 | 28 | 0 | 1 | 64 | 1 | 64 | 4.74e-18 | 79.3 |
| MsG0880045278.01.T01 | MTR_2g010890 | 24.631 | 406 | 217 | 14 | 101 | 472 | 8 | 358 | 1.70e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT1G67900 | 62.031 | 640 | 194 | 11 | 1 | 601 | 1 | 630 | 0.0 | 706 |
| MsG0880045278.01.T01 | AT3G26490 | 46.552 | 638 | 252 | 17 | 1 | 600 | 1 | 587 | 2.01e-177 | 515 |
| MsG0880045278.01.T01 | AT3G26490 | 46.552 | 638 | 252 | 17 | 1 | 600 | 1 | 587 | 2.01e-177 | 515 |
| MsG0880045278.01.T01 | AT3G26490 | 46.552 | 638 | 252 | 17 | 1 | 600 | 1 | 587 | 2.01e-177 | 515 |
| MsG0880045278.01.T01 | AT3G26490 | 50.740 | 473 | 180 | 13 | 1 | 436 | 1 | 457 | 1.22e-145 | 431 |
| MsG0880045278.01.T01 | AT2G14820 | 44.190 | 525 | 235 | 10 | 1 | 495 | 1 | 497 | 8.87e-140 | 421 |
| MsG0880045278.01.T01 | AT2G14820 | 44.190 | 525 | 235 | 10 | 1 | 495 | 1 | 497 | 8.87e-140 | 421 |
| MsG0880045278.01.T01 | AT5G47800 | 42.520 | 508 | 249 | 9 | 1 | 492 | 1 | 481 | 7.58e-135 | 405 |
| MsG0880045278.01.T01 | AT5G47800 | 42.520 | 508 | 249 | 9 | 1 | 492 | 1 | 481 | 7.58e-135 | 405 |
| MsG0880045278.01.T01 | AT5G47800 | 42.520 | 508 | 249 | 9 | 1 | 492 | 1 | 481 | 7.58e-135 | 405 |
| MsG0880045278.01.T01 | AT5G47800 | 42.520 | 508 | 249 | 9 | 1 | 492 | 114 | 594 | 1.62e-133 | 405 |
| MsG0880045278.01.T01 | AT4G37590 | 42.197 | 519 | 239 | 11 | 1 | 499 | 1 | 478 | 1.16e-128 | 390 |
| MsG0880045278.01.T01 | AT4G31820 | 42.747 | 517 | 242 | 10 | 1 | 500 | 1 | 480 | 5.69e-128 | 388 |
| MsG0880045278.01.T01 | AT5G67440 | 41.650 | 509 | 247 | 8 | 1 | 489 | 1 | 479 | 6.99e-124 | 378 |
| MsG0880045278.01.T01 | AT5G67440 | 41.650 | 509 | 247 | 8 | 1 | 489 | 1 | 479 | 6.99e-124 | 378 |
| MsG0880045278.01.T01 | AT2G23050 | 42.136 | 515 | 212 | 13 | 1 | 491 | 1 | 453 | 1.52e-117 | 358 |
| MsG0880045278.01.T01 | AT4G31820 | 42.241 | 464 | 215 | 9 | 53 | 500 | 1 | 427 | 1.83e-111 | 343 |
| MsG0880045278.01.T01 | AT5G67440 | 41.026 | 468 | 227 | 7 | 41 | 489 | 5 | 442 | 1.15e-108 | 337 |
| MsG0880045278.01.T01 | AT1G30440 | 37.405 | 524 | 270 | 10 | 1 | 484 | 1 | 506 | 4.34e-102 | 324 |
| MsG0880045278.01.T01 | AT5G13600 | 37.381 | 527 | 255 | 12 | 1 | 486 | 1 | 493 | 8.50e-94 | 300 |
| MsG0880045278.01.T01 | AT5G03250 | 35.932 | 526 | 273 | 11 | 1 | 486 | 1 | 502 | 2.53e-92 | 296 |
| MsG0880045278.01.T01 | AT5G67385 | 34.483 | 493 | 271 | 9 | 23 | 496 | 22 | 481 | 9.81e-89 | 287 |
| MsG0880045278.01.T01 | AT5G10250 | 34.921 | 504 | 264 | 11 | 13 | 486 | 37 | 506 | 5.30e-84 | 275 |
| MsG0880045278.01.T01 | AT5G10250 | 34.068 | 499 | 260 | 9 | 13 | 486 | 37 | 491 | 1.24e-83 | 274 |
| MsG0880045278.01.T01 | AT5G48800 | 36.232 | 483 | 257 | 7 | 25 | 490 | 40 | 488 | 5.72e-82 | 270 |
| MsG0880045278.01.T01 | AT1G03010 | 36.605 | 489 | 265 | 11 | 24 | 486 | 7 | 476 | 1.50e-80 | 266 |
| MsG0880045278.01.T01 | AT3G08660 | 34.280 | 493 | 263 | 12 | 8 | 486 | 21 | 466 | 1.54e-80 | 265 |
| MsG0880045278.01.T01 | AT2G47860 | 35.010 | 477 | 279 | 8 | 24 | 486 | 35 | 494 | 1.90e-80 | 266 |
| MsG0880045278.01.T01 | AT1G03010 | 35.632 | 522 | 281 | 12 | 1 | 486 | 1 | 503 | 1.92e-80 | 266 |
| MsG0880045278.01.T01 | AT3G44820 | 34.280 | 528 | 279 | 10 | 13 | 492 | 10 | 517 | 3.48e-80 | 266 |
| MsG0880045278.01.T01 | AT1G03010 | 36.605 | 489 | 265 | 11 | 24 | 486 | 33 | 502 | 4.25e-80 | 265 |
| MsG0880045278.01.T01 | AT5G67385 | 33.475 | 469 | 260 | 9 | 47 | 496 | 1 | 436 | 2.15e-79 | 261 |
| MsG0880045278.01.T01 | AT5G67385 | 33.475 | 469 | 260 | 9 | 47 | 496 | 1 | 436 | 2.15e-79 | 261 |
| MsG0880045278.01.T01 | AT5G67385 | 33.475 | 469 | 260 | 9 | 47 | 496 | 1 | 436 | 2.15e-79 | 261 |
| MsG0880045278.01.T01 | AT5G67385 | 33.475 | 469 | 260 | 9 | 47 | 496 | 1 | 436 | 2.15e-79 | 261 |
| MsG0880045278.01.T01 | AT3G08570 | 34.930 | 501 | 269 | 14 | 12 | 486 | 21 | 490 | 1.03e-77 | 258 |
| MsG0880045278.01.T01 | AT2G23050 | 40.602 | 399 | 156 | 10 | 112 | 491 | 1 | 337 | 9.28e-77 | 248 |
| MsG0880045278.01.T01 | AT2G47860 | 33.400 | 500 | 279 | 9 | 24 | 486 | 35 | 517 | 3.17e-75 | 253 |
| MsG0880045278.01.T01 | AT3G49970 | 33.634 | 443 | 225 | 9 | 39 | 469 | 7 | 392 | 1.49e-73 | 244 |
| MsG0880045278.01.T01 | AT3G49970 | 33.634 | 443 | 225 | 9 | 39 | 469 | 7 | 392 | 1.49e-73 | 244 |
| MsG0880045278.01.T01 | AT3G08660 | 34.642 | 433 | 229 | 10 | 68 | 486 | 14 | 406 | 1.23e-70 | 237 |
| MsG0880045278.01.T01 | AT2G30520 | 32.927 | 492 | 265 | 11 | 21 | 490 | 25 | 473 | 6.02e-69 | 234 |
| MsG0880045278.01.T01 | AT5G66560 | 31.376 | 545 | 259 | 12 | 23 | 484 | 16 | 528 | 3.03e-68 | 234 |
| MsG0880045278.01.T01 | AT5G66560 | 31.569 | 529 | 247 | 12 | 39 | 484 | 3 | 499 | 2.21e-66 | 228 |
| MsG0880045278.01.T01 | AT5G66560 | 33.772 | 456 | 230 | 10 | 69 | 484 | 66 | 489 | 1.26e-65 | 226 |
| MsG0880045278.01.T01 | AT2G30520 | 33.191 | 467 | 247 | 11 | 46 | 490 | 2 | 425 | 8.43e-63 | 217 |
| MsG0880045278.01.T01 | AT2G30520 | 33.191 | 467 | 247 | 11 | 46 | 490 | 2 | 425 | 8.43e-63 | 217 |
| MsG0880045278.01.T01 | AT3G50840 | 31.828 | 487 | 265 | 8 | 23 | 484 | 13 | 457 | 9.68e-63 | 217 |
| MsG0880045278.01.T01 | AT3G08660 | 31.860 | 430 | 237 | 11 | 22 | 437 | 30 | 417 | 4.18e-60 | 206 |
| MsG0880045278.01.T01 | AT2G47860 | 32.629 | 426 | 256 | 8 | 24 | 435 | 35 | 443 | 1.67e-58 | 202 |
| MsG0880045278.01.T01 | AT5G64330 | 47.863 | 234 | 110 | 2 | 262 | 486 | 316 | 546 | 1.84e-57 | 204 |
| MsG0880045278.01.T01 | AT5G64330 | 39.224 | 232 | 111 | 5 | 39 | 242 | 6 | 235 | 1.25e-42 | 162 |
| MsG0880045278.01.T01 | AT5G64330 | 47.863 | 234 | 110 | 2 | 262 | 486 | 375 | 605 | 3.03e-57 | 204 |
| MsG0880045278.01.T01 | AT5G64330 | 37.879 | 264 | 134 | 5 | 7 | 242 | 33 | 294 | 7.35e-49 | 181 |
| MsG0880045278.01.T01 | AT5G64330 | 47.863 | 234 | 110 | 2 | 262 | 486 | 375 | 605 | 3.41e-57 | 205 |
| MsG0880045278.01.T01 | AT5G64330 | 37.879 | 264 | 134 | 5 | 7 | 242 | 33 | 294 | 1.97e-48 | 181 |
| MsG0880045278.01.T01 | AT3G50840 | 31.317 | 463 | 251 | 8 | 47 | 484 | 1 | 421 | 1.05e-55 | 197 |
| MsG0880045278.01.T01 | AT3G50840 | 31.317 | 463 | 251 | 8 | 47 | 484 | 1 | 421 | 1.05e-55 | 197 |
| MsG0880045278.01.T01 | AT5G03250 | 32.200 | 441 | 236 | 10 | 112 | 513 | 1 | 417 | 1.68e-55 | 195 |
| MsG0880045278.01.T01 | AT2G47860 | 30.958 | 449 | 256 | 9 | 24 | 435 | 35 | 466 | 1.68e-53 | 189 |
| MsG0880045278.01.T01 | AT2G47860 | 32.905 | 389 | 234 | 7 | 112 | 486 | 1 | 376 | 5.88e-52 | 187 |
| MsG0880045278.01.T01 | AT2G47860 | 32.905 | 389 | 234 | 7 | 112 | 486 | 1 | 376 | 5.88e-52 | 187 |
| MsG0880045278.01.T01 | AT5G66560 | 27.823 | 496 | 243 | 11 | 23 | 435 | 16 | 479 | 6.76e-45 | 166 |
| MsG0880045278.01.T01 | AT5G48130 | 27.473 | 455 | 268 | 12 | 51 | 484 | 54 | 467 | 4.57e-44 | 167 |
| MsG0880045278.01.T01 | AT1G52770 | 33.441 | 311 | 149 | 5 | 199 | 486 | 28 | 303 | 4.77e-44 | 163 |
| MsG0880045278.01.T01 | AT3G19850 | 26.419 | 458 | 251 | 10 | 68 | 484 | 51 | 463 | 1.22e-40 | 155 |
| MsG0880045278.01.T01 | AT3G15570 | 31.373 | 306 | 148 | 5 | 208 | 486 | 38 | 308 | 1.67e-40 | 153 |
| MsG0880045278.01.T01 | AT3G03510 | 30.383 | 418 | 215 | 12 | 81 | 486 | 8 | 361 | 5.60e-38 | 146 |
| MsG0880045278.01.T01 | AT1G50280 | 23.820 | 445 | 271 | 10 | 69 | 480 | 51 | 460 | 7.44e-32 | 130 |
| MsG0880045278.01.T01 | AT1G50280 | 23.820 | 445 | 271 | 10 | 69 | 480 | 18 | 427 | 7.61e-32 | 129 |
| MsG0880045278.01.T01 | AT5G17580 | 25.000 | 496 | 283 | 9 | 22 | 484 | 16 | 455 | 5.43e-29 | 122 |
| MsG0880045278.01.T01 | AT5G17580 | 25.000 | 496 | 283 | 9 | 22 | 484 | 1 | 440 | 8.48e-29 | 121 |
| MsG0880045278.01.T01 | AT3G22104 | 25.216 | 464 | 274 | 14 | 28 | 469 | 6 | 418 | 1.84e-26 | 114 |
| MsG0880045278.01.T01 | AT3G22104 | 23.785 | 391 | 227 | 10 | 99 | 469 | 4 | 343 | 3.47e-17 | 84.7 |
| MsG0880045278.01.T01 | AT3G22104 | 23.785 | 391 | 227 | 10 | 99 | 469 | 4 | 343 | 3.47e-17 | 84.7 |
| MsG0880045278.01.T01 | AT3G22104 | 23.785 | 391 | 227 | 10 | 99 | 469 | 4 | 343 | 3.47e-17 | 84.7 |
| MsG0880045278.01.T01 | AT3G49900 | 38.144 | 97 | 53 | 4 | 390 | 484 | 214 | 305 | 1.94e-11 | 67.0 |
Find 74 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACAAAAGCATTGTCTTTA+TGG | 0.066371 | 8:+56811891 | MsG0880045278.01.T01:CDS |
| AATTGAAAATTGATCTTTAT+TGG | 0.119941 | 8:+56812068 | MsG0880045278.01.T01:CDS |
| AATGGTAAATTATTAAATTT+AGG | 0.148525 | 8:+56814147 | MsG0880045278.01.T01:three_prime_UTR |
| TAAAGATCGAATTGGTTAAA+AGG | 0.207577 | 8:+56812350 | MsG0880045278.01.T01:CDS |
| GGAAGAAGTTCTAGATTTAA+AGG | 0.227147 | 8:+56814003 | MsG0880045278.01.T01:CDS |
| AAAATGTTAGGAATATTAAT+TGG | 0.239640 | 8:-56811037 | None:intergenic |
| AAAGCATTACTCACTTCTTA+TGG | 0.244005 | 8:+56813805 | MsG0880045278.01.T01:CDS |
| AGTGATAATTGGAGTGTTAA+TGG | 0.286291 | 8:+56813883 | MsG0880045278.01.T01:CDS |
| GCATCACCGATGAGATTTAA+AGG | 0.295988 | 8:-56812127 | None:intergenic |
| ATGGTAAATTATTAAATTTA+GGG | 0.320862 | 8:+56814148 | MsG0880045278.01.T01:three_prime_UTR |
| TTCTTCTCCGCCAGGAAAAT+CGG | 0.327860 | 8:-56811669 | None:intergenic |
| GTATACATGCTAGTGATAAT+TGG | 0.330908 | 8:+56813872 | MsG0880045278.01.T01:CDS |
| AATAATGATGTTTCAAGTAT+TGG | 0.338999 | 8:+56813976 | MsG0880045278.01.T01:CDS |
| AACAGTGAATGATCTTATAA+TGG | 0.347103 | 8:+56812396 | MsG0880045278.01.T01:CDS |
| ATGACAGAAGATGCAGAAAA+AGG | 0.352463 | 8:+56811788 | MsG0880045278.01.T01:CDS |
| TGAAAATTTACGCATCTAGA+TGG | 0.355275 | 8:+56812152 | MsG0880045278.01.T01:CDS |
| GATGTTTCAAGTATTGGAAT+TGG | 0.363038 | 8:+56813982 | MsG0880045278.01.T01:CDS |
| TGATCACATCTTGCAAATTC+AGG | 0.365444 | 8:-56812700 | None:intergenic |
| AATGGTTTGTGATGTGGATT+TGG | 0.367783 | 8:+56812414 | MsG0880045278.01.T01:CDS |
| GTTGTGTTATTTGTTGATTT+TGG | 0.373642 | 8:-56813916 | None:intergenic |
| CAACAAATAACACAACTCTT+AGG | 0.377245 | 8:+56813923 | MsG0880045278.01.T01:CDS |
| AAAGAATGTTTAGTAAGTTA+TGG | 0.390949 | 8:+56814052 | MsG0880045278.01.T01:CDS |
| TCTTCAGTGTAGAAGATATC+AGG | 0.393309 | 8:-56811164 | None:intergenic |
| AACCCTCTTTAAGACCTTTG+AGG | 0.393795 | 8:-56811957 | None:intergenic |
| TCTTCTCCGCCAGGAAAATC+GGG | 0.399053 | 8:-56811668 | None:intergenic |
| TCCTTCTTTAAAGATCGAAT+TGG | 0.405072 | 8:+56812342 | MsG0880045278.01.T01:CDS |
| GGATTTGGTGATGAACATAT+TGG | 0.412592 | 8:+56812429 | MsG0880045278.01.T01:CDS |
| ATCGAATTGGTTAAAAGGGT+TGG | 0.422712 | 8:+56812355 | MsG0880045278.01.T01:CDS |
| GATCGTTGAGGACTAGTTGA+TGG | 0.426637 | 8:-56812481 | None:intergenic |
| TGAACGGAGGAGGTCGCGTT+CGG | 0.435095 | 8:+56812516 | MsG0880045278.01.T01:CDS |
| AAAGATCGAATTGGTTAAAA+GGG | 0.439267 | 8:+56812351 | MsG0880045278.01.T01:CDS |
| CTTGCTCAAAGAAGAGAACT+TGG | 0.445745 | 8:-56813732 | None:intergenic |
| GCATCTACAAAGATTATGTT+CGG | 0.448023 | 8:+56811607 | MsG0880045278.01.T01:CDS |
| ACCAATTCGATCTTTAAAGA+AGG | 0.448828 | 8:-56812343 | None:intergenic |
| TTTAATGTTGCTTGATATGT+TGG | 0.461258 | 8:-56813785 | None:intergenic |
| TTCAACTCTTGCATACTTCG+CGG | 0.471871 | 8:+56811839 | MsG0880045278.01.T01:CDS |
| CAACTTTCAAAAGCTTAAGA+AGG | 0.474766 | 8:-56812300 | None:intergenic |
| ACTTGGACAACAAGTCTTAG+TGG | 0.475162 | 8:-56813715 | None:intergenic |
| ACTCTTGCATACTTCGCGGT+TGG | 0.481463 | 8:+56811843 | MsG0880045278.01.T01:CDS |
| ACATAGTTCAAAATTGAAAG+TGG | 0.494937 | 8:+56812591 | MsG0880045278.01.T01:CDS |
| AAGATATAGAAATGACAAGA+GGG | 0.498748 | 8:-56810990 | None:intergenic |
| CAAGCTAGAGCTGCATCAAA+TGG | 0.498776 | 8:+56813751 | MsG0880045278.01.T01:CDS |
| TCAAATGCTTCTTCTCCGCC+AGG | 0.501513 | 8:-56811677 | None:intergenic |
| TTCTGTCATTTGTAAATACT+CGG | 0.506028 | 8:-56811774 | None:intergenic |
| CATTGAAGCGATTTCCTCAA+AGG | 0.510538 | 8:+56811943 | MsG0880045278.01.T01:CDS |
| CAACTAGTCCTCAACGATCA+AGG | 0.516329 | 8:+56812485 | MsG0880045278.01.T01:CDS |
| TCTATATCTTCTCTCTTCAG+AGG | 0.520590 | 8:+56811003 | MsG0880045278.01.T01:five_prime_UTR |
| AATTTGCTTCCATCTGCAAA+AGG | 0.521044 | 8:+56812259 | MsG0880045278.01.T01:CDS |
| TCTTATAATGGTTTGTGATG+TGG | 0.521261 | 8:+56812408 | MsG0880045278.01.T01:CDS |
| TAAGGATGTGAATTTGCCTC+TGG | 0.529241 | 8:+56812648 | MsG0880045278.01.T01:CDS |
| TTCCTCAAAGGTCTTAAAGA+GGG | 0.533391 | 8:+56811955 | MsG0880045278.01.T01:CDS |
| TCTACACTGAAGACTCAGTC+AGG | 0.537198 | 8:+56811174 | MsG0880045278.01.T01:CDS |
| GAAGATATAGAAATGACAAG+AGG | 0.543924 | 8:-56810991 | None:intergenic |
| AGCATTGTCTTTATGGTCAG+AGG | 0.543953 | 8:+56811898 | MsG0880045278.01.T01:CDS |
| CTATGTGCAAAATTCTGCTA+CGG | 0.543999 | 8:+56811701 | MsG0880045278.01.T01:CDS |
| GTATCTTCAAGAGGTTGCTA+AGG | 0.558755 | 8:+56812630 | MsG0880045278.01.T01:CDS |
| TGGTAAATTATTAAATTTAG+GGG | 0.561588 | 8:+56814149 | MsG0880045278.01.T01:three_prime_UTR |
| TTTCCTCAAAGGTCTTAAAG+AGG | 0.564698 | 8:+56811954 | MsG0880045278.01.T01:CDS |
| AAGGGTTGGACTTCAATTCG+AGG | 0.571544 | 8:+56812369 | MsG0880045278.01.T01:CDS |
| GGTAAATTATTAAATTTAGG+GGG | 0.580263 | 8:+56814150 | MsG0880045278.01.T01:three_prime_UTR |
| TGTTGATAAGTATCTTCAAG+AGG | 0.583479 | 8:+56812621 | MsG0880045278.01.T01:CDS |
| AAAATGCCTTTAAATCTCAT+CGG | 0.586799 | 8:+56812121 | MsG0880045278.01.T01:CDS |
| TGCTATTGATACTTATCTCA+AGG | 0.587928 | 8:+56812738 | MsG0880045278.01.T01:CDS |
| CACTAGATATCTTCTTCACA+AGG | 0.591191 | 8:+56811349 | MsG0880045278.01.T01:CDS |
| ATACTCGGCAGCGCATCTTG+CGG | 0.591671 | 8:-56811759 | None:intergenic |
| GATCTTATAATTCAAGTGAA+AGG | 0.592130 | 8:+56811326 | MsG0880045278.01.T01:CDS |
| GAAGATGATATATCTTGTAG+TGG | 0.597080 | 8:+56811986 | MsG0880045278.01.T01:CDS |
| GTCATGAAGCTTATGAAACT+AGG | 0.600779 | 8:+56811134 | MsG0880045278.01.T01:exon |
| ATAGCAACAAATTTATCCAG+AGG | 0.640160 | 8:-56812664 | None:intergenic |
| AAAGCGAACCTTGATCGTTG+AGG | 0.641146 | 8:-56812493 | None:intergenic |
| GCTAGAGCTGCATCAAATGG+TGG | 0.658246 | 8:+56813754 | MsG0880045278.01.T01:CDS |
| TCTTAGGATGAAACTAGCTG+AGG | 0.672843 | 8:+56813939 | MsG0880045278.01.T01:CDS |
| CTTCTCCGCCAGGAAAATCG+GGG | 0.674735 | 8:-56811667 | None:intergenic |
| CGGAACTCGACAAAACCGAA+AGG | 0.692836 | 8:+56813614 | MsG0880045278.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGGTAAATTATTAAATTT+AGG | + | Chr8:56814147-56814166 | MsG0880045278.01.T01:three_prime_UTR | 10.0% |
| !! | ATGGTAAATTATTAAATTTA+GGG | + | Chr8:56814148-56814167 | MsG0880045278.01.T01:three_prime_UTR | 10.0% |
| !! | TAATATGTGATAATATAAAT+AGG | - | Chr8:56811227-56811246 | None:intergenic | 10.0% |
| !! | AAAATGTTAGGAATATTAAT+TGG | - | Chr8:56811040-56811059 | None:intergenic | 15.0% |
| !! | AATTGAAAATTGATCTTTAT+TGG | + | Chr8:56812068-56812087 | MsG0880045278.01.T01:CDS | 15.0% |
| !! | ATATTCTCAAATAACAAAAT+AGG | + | Chr8:56813214-56813233 | MsG0880045278.01.T01:intron | 15.0% |
| !! | TGGTAAATTATTAAATTTAG+GGG | + | Chr8:56814149-56814168 | MsG0880045278.01.T01:three_prime_UTR | 15.0% |
| !!! | AATTTTTCTGAAAAAAGAAA+TGG | - | Chr8:56811491-56811510 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+CGG | - | Chr8:56812855-56812874 | None:intergenic | 15.0% |
| !!! | ATTTTTCTGAAAAAAGAAAT+GGG | - | Chr8:56811490-56811509 | None:intergenic | 15.0% |
| !!! | GTAAAGTTTTATAAAATGTT+AGG | - | Chr8:56811052-56811071 | None:intergenic | 15.0% |
| !!! | TTTATTTTCTTTGTATATTC+AGG | + | Chr8:56811279-56811298 | MsG0880045278.01.T01:intron | 15.0% |
| !!! | TTTTTTCAAATTTTTCAGTA+TGG | + | Chr8:56814123-56814142 | MsG0880045278.01.T01:three_prime_UTR | 15.0% |
| !! | AAAGAATGTTTAGTAAGTTA+TGG | + | Chr8:56814052-56814071 | MsG0880045278.01.T01:CDS | 20.0% |
| !! | AATAAAACTTAACTTCTAGT+GGG | - | Chr8:56813115-56813134 | None:intergenic | 20.0% |
| !! | ATAAATCAGTAAGAAAAAGA+TGG | + | Chr8:56812026-56812045 | MsG0880045278.01.T01:CDS | 20.0% |
| !! | ATCAAATCTTATTCAGAATT+AGG | - | Chr8:56813400-56813419 | None:intergenic | 20.0% |
| !! | ATGATAAAGACAATACTTTA+AGG | - | Chr8:56813065-56813084 | None:intergenic | 20.0% |
| !!! | AACTTACTAAACATTCTTTT+AGG | - | Chr8:56814051-56814070 | None:intergenic | 20.0% |
| !!! | AATAATGATGTTTCAAGTAT+TGG | + | Chr8:56813976-56813995 | MsG0880045278.01.T01:CDS | 20.0% |
| !!! | TTTGTTTGTCTAAAATTTTC+AGG | + | Chr8:56813585-56813604 | MsG0880045278.01.T01:intron | 20.0% |
| ! | AAAATGCCTTTAAATCTCAT+CGG | + | Chr8:56812121-56812140 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | AAAGATCGAATTGGTTAAAA+GGG | + | Chr8:56812351-56812370 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | AACAACCAAGATATGTAATT+TGG | + | Chr8:56813263-56813282 | MsG0880045278.01.T01:intron | 25.0% |
| ! | AACAGTGAATGATCTTATAA+TGG | + | Chr8:56812396-56812415 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | AACATCCAAATTACATATCT+TGG | - | Chr8:56813271-56813290 | None:intergenic | 25.0% |
| ! | AAGATATAGAAATGACAAGA+GGG | - | Chr8:56810993-56811012 | None:intergenic | 25.0% |
| ! | ACACGATCTAAATTTAATGA+TGG | - | Chr8:56813424-56813443 | None:intergenic | 25.0% |
| ! | ACATAGTTCAAAATTGAAAG+TGG | + | Chr8:56812591-56812610 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | AGGAAAAACTTTCAAATCAT+TGG | - | Chr8:56812326-56812345 | None:intergenic | 25.0% |
| ! | ATAAATGGTCAAAATCTAAC+AGG | - | Chr8:56813167-56813186 | None:intergenic | 25.0% |
| ! | ATCATTGTTAGATGCATAAA+TGG | - | Chr8:56813182-56813201 | None:intergenic | 25.0% |
| ! | ATCTAACAATGATTGAAGTT+TGG | + | Chr8:56813189-56813208 | MsG0880045278.01.T01:intron | 25.0% |
| ! | CAATAAAACTTAACTTCTAG+TGG | - | Chr8:56813116-56813135 | None:intergenic | 25.0% |
| ! | GATCTTATAATTCAAGTGAA+AGG | + | Chr8:56811326-56811345 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | TAAAGATCGAATTGGTTAAA+AGG | + | Chr8:56812350-56812369 | MsG0880045278.01.T01:CDS | 25.0% |
| ! | TATTACCGGTATTTATATGT+CGG | - | Chr8:56812841-56812860 | None:intergenic | 25.0% |
| ! | TTAATGTTACACACTGATAT+GGG | + | Chr8:56812911-56812930 | MsG0880045278.01.T01:intron | 25.0% |
| ! | TTGGTTGTTAGATGATTAAT+CGG | - | Chr8:56813252-56813271 | None:intergenic | 25.0% |
| !! | TTACAAACTGATGATTTTGT+AGG | - | Chr8:56813456-56813475 | None:intergenic | 25.0% |
| !! | TTCTGTCATTTGTAAATACT+CGG | - | Chr8:56811777-56811796 | None:intergenic | 25.0% |
| !! | TTTAATGTTGCTTGATATGT+TGG | - | Chr8:56813788-56813807 | None:intergenic | 25.0% |
| !!! | AACATTCTTTTAGGTTTAGT+AGG | - | Chr8:56814042-56814061 | None:intergenic | 25.0% |
| !!! | CAAATTTTTCAGTATGGTAA+TGG | + | Chr8:56814129-56814148 | MsG0880045278.01.T01:three_prime_UTR | 25.0% |
| !!! | GTTGTGTTATTTGTTGATTT+TGG | - | Chr8:56813919-56813938 | None:intergenic | 25.0% |
| AATCAGTAAGAAAAAGATGG+TGG | + | Chr8:56812029-56812048 | MsG0880045278.01.T01:CDS | 30.0% | |
| ATAGCAACAAATTTATCCAG+AGG | - | Chr8:56812667-56812686 | None:intergenic | 30.0% | |
| ATCAGTAAGAAAAAGATGGT+GGG | + | Chr8:56812030-56812049 | MsG0880045278.01.T01:CDS | 30.0% | |
| ATCAGTGTGTAACATTAACA+CGG | - | Chr8:56812909-56812928 | None:intergenic | 30.0% | |
| CAAAATCTAACAGGAAAGTT+TGG | - | Chr8:56813158-56813177 | None:intergenic | 30.0% | |
| CAACAAATAACACAACTCTT+AGG | + | Chr8:56813923-56813942 | MsG0880045278.01.T01:CDS | 30.0% | |
| CAACTTTCAAAAGCTTAAGA+AGG | - | Chr8:56812303-56812322 | None:intergenic | 30.0% | |
| CCACAATATGTTTCATTTGT+GGG | + | Chr8:56813013-56813032 | MsG0880045278.01.T01:intron | 30.0% | |
| GAAGATATAGAAATGACAAG+AGG | - | Chr8:56810994-56811013 | None:intergenic | 30.0% | |
| GAAGATGATATATCTTGTAG+TGG | + | Chr8:56811986-56812005 | MsG0880045278.01.T01:CDS | 30.0% | |
| GCATCTACAAAGATTATGTT+CGG | + | Chr8:56811607-56811626 | MsG0880045278.01.T01:CDS | 30.0% | |
| GGGAAATAAAAACAAGAAGT+TGG | - | Chr8:56810973-56810992 | None:intergenic | 30.0% | |
| GTATACATGCTAGTGATAAT+TGG | + | Chr8:56813872-56813891 | MsG0880045278.01.T01:CDS | 30.0% | |
| GTTAATGTTACACACTGATA+TGG | + | Chr8:56812910-56812929 | MsG0880045278.01.T01:intron | 30.0% | |
| TGAAAATTTACGCATCTAGA+TGG | + | Chr8:56812152-56812171 | MsG0880045278.01.T01:CDS | 30.0% | |
| TGCTATTGATACTTATCTCA+AGG | + | Chr8:56812738-56812757 | MsG0880045278.01.T01:CDS | 30.0% | |
| ! | AAAGCATTACTCACTTCTTA+TGG | + | Chr8:56813805-56813824 | MsG0880045278.01.T01:CDS | 30.0% |
| ! | ACCAATTCGATCTTTAAAGA+AGG | - | Chr8:56812346-56812365 | None:intergenic | 30.0% |
| ! | AGTGATAATTGGAGTGTTAA+TGG | + | Chr8:56813883-56813902 | MsG0880045278.01.T01:CDS | 30.0% |
| ! | TATCATCTTTTTCCTGGTTT+AGG | + | Chr8:56813079-56813098 | MsG0880045278.01.T01:intron | 30.0% |
| ! | TCCTTCTTTAAAGATCGAAT+TGG | + | Chr8:56812342-56812361 | MsG0880045278.01.T01:CDS | 30.0% |
| ! | TCTACATAGTCTTTTCCTTT+CGG | - | Chr8:56813632-56813651 | None:intergenic | 30.0% |
| ! | TCTTATAATGGTTTGTGATG+TGG | + | Chr8:56812408-56812427 | MsG0880045278.01.T01:CDS | 30.0% |
| ! | TGTCTTTATCATCTTTTTCC+TGG | + | Chr8:56813073-56813092 | MsG0880045278.01.T01:intron | 30.0% |
| ! | TGTTGATAAGTATCTTCAAG+AGG | + | Chr8:56812621-56812640 | MsG0880045278.01.T01:CDS | 30.0% |
| !! | GATGTTTCAAGTATTGGAAT+TGG | + | Chr8:56813982-56814001 | MsG0880045278.01.T01:CDS | 30.0% |
| !! | GGAAGAAGTTCTAGATTTAA+AGG | + | Chr8:56814003-56814022 | MsG0880045278.01.T01:CDS | 30.0% |
| AAGTCTAAATGTCGTATCCT+AGG | - | Chr8:56813329-56813348 | None:intergenic | 35.0% | |
| ATCGAATTGGTTAAAAGGGT+TGG | + | Chr8:56812355-56812374 | MsG0880045278.01.T01:CDS | 35.0% | |
| ATCTAACAGGAAAGTTTGGT+TGG | - | Chr8:56813154-56813173 | None:intergenic | 35.0% | |
| ATGACAGAAGATGCAGAAAA+AGG | + | Chr8:56811788-56811807 | MsG0880045278.01.T01:CDS | 35.0% | |
| CACTAGATATCTTCTTCACA+AGG | + | Chr8:56811349-56811368 | MsG0880045278.01.T01:CDS | 35.0% | |
| CCCACAAATGAAACATATTG+TGG | - | Chr8:56813016-56813035 | None:intergenic | 35.0% | |
| CTATGTGCAAAATTCTGCTA+CGG | + | Chr8:56811701-56811720 | MsG0880045278.01.T01:CDS | 35.0% | |
| GCCACAATATGTTTCATTTG+TGG | + | Chr8:56813012-56813031 | MsG0880045278.01.T01:intron | 35.0% | |
| GTCATGAAGCTTATGAAACT+AGG | + | Chr8:56811134-56811153 | MsG0880045278.01.T01:exon | 35.0% | |
| GTGGATATGTGTCAAAAAGT+GGG | - | Chr8:56813493-56813512 | None:intergenic | 35.0% | |
| TAATTATCTGAGCGTGTGTT+TGG | - | Chr8:56811450-56811469 | None:intergenic | 35.0% | |
| TCAGTAAGAAAAAGATGGTG+GGG | + | Chr8:56812031-56812050 | MsG0880045278.01.T01:CDS | 35.0% | |
| TCTATATCTTCTCTCTTCAG+AGG | + | Chr8:56811003-56811022 | MsG0880045278.01.T01:five_prime_UTR | 35.0% | |
| TCTTCAGTGTAGAAGATATC+AGG | - | Chr8:56811167-56811186 | None:intergenic | 35.0% | |
| TGATCACATCTTGCAAATTC+AGG | - | Chr8:56812703-56812722 | None:intergenic | 35.0% | |
| TGTGGATATGTGTCAAAAAG+TGG | - | Chr8:56813494-56813513 | None:intergenic | 35.0% | |
| TTCCTCAAAGGTCTTAAAGA+GGG | + | Chr8:56811955-56811974 | MsG0880045278.01.T01:CDS | 35.0% | |
| TTTCCTCAAAGGTCTTAAAG+AGG | + | Chr8:56811954-56811973 | MsG0880045278.01.T01:CDS | 35.0% | |
| ! | AATGGTTTGTGATGTGGATT+TGG | + | Chr8:56812414-56812433 | MsG0880045278.01.T01:CDS | 35.0% |
| ! | AATTTGCTTCCATCTGCAAA+AGG | + | Chr8:56812259-56812278 | MsG0880045278.01.T01:CDS | 35.0% |
| ! | ATGTCTTCAATCTGAAGTGT+CGG | + | Chr8:56812948-56812967 | MsG0880045278.01.T01:intron | 35.0% |
| ! | CCATAAAGACAATGCTTTTG+TGG | - | Chr8:56811894-56811913 | None:intergenic | 35.0% |
| ! | TCAGAATCAGAACCAGTTTT+TGG | - | Chr8:56812181-56812200 | None:intergenic | 35.0% |
| !! | AAGCACCGACATATAAATAC+CGG | + | Chr8:56812833-56812852 | MsG0880045278.01.T01:intron | 35.0% |
| !! | CCACAAAAGCATTGTCTTTA+TGG | + | Chr8:56811891-56811910 | MsG0880045278.01.T01:CDS | 35.0% |
| !! | CTAAAATTTTCAGGCTCATC+CGG | + | Chr8:56813594-56813613 | MsG0880045278.01.T01:intron | 35.0% |
| !! | GATGATTTTGTAGGTTGAGT+CGG | - | Chr8:56813447-56813466 | None:intergenic | 35.0% |
| !! | GGATTTGGTGATGAACATAT+TGG | + | Chr8:56812429-56812448 | MsG0880045278.01.T01:CDS | 35.0% |
| !! | TGCAAACATTTTGATAGCAG+AGG | - | Chr8:56811590-56811609 | None:intergenic | 35.0% |
| AACAGGAAAGTTTGGTTGGA+GGG | - | Chr8:56813150-56813169 | None:intergenic | 40.0% | |
| ACTTGGACAACAAGTCTTAG+TGG | - | Chr8:56813718-56813737 | None:intergenic | 40.0% | |
| AGCATTGTCTTTATGGTCAG+AGG | + | Chr8:56811898-56811917 | MsG0880045278.01.T01:CDS | 40.0% | |
| ATGTCGGAAGAAATATGGTG+TGG | - | Chr8:56813512-56813531 | None:intergenic | 40.0% | |
| CATTGAAGCGATTTCCTCAA+AGG | + | Chr8:56811943-56811962 | MsG0880045278.01.T01:CDS | 40.0% | |
| CTTGCTCAAAGAAGAGAACT+TGG | - | Chr8:56813735-56813754 | None:intergenic | 40.0% | |
| GCATCACCGATGAGATTTAA+AGG | - | Chr8:56812130-56812149 | None:intergenic | 40.0% | |
| GTATCTTCAAGAGGTTGCTA+AGG | + | Chr8:56812630-56812649 | MsG0880045278.01.T01:CDS | 40.0% | |
| GTCTCATGTCGGAAGAAATA+TGG | - | Chr8:56813517-56813536 | None:intergenic | 40.0% | |
| GTGTAACATTAACACGGCTT+TGG | - | Chr8:56812903-56812922 | None:intergenic | 40.0% | |
| GTGTGTTAAGAGTCTCACAT+CGG | - | Chr8:56813307-56813326 | None:intergenic | 40.0% | |
| TAACAGGAAAGTTTGGTTGG+AGG | - | Chr8:56813151-56813170 | None:intergenic | 40.0% | |
| TAAGGATGTGAATTTGCCTC+TGG | + | Chr8:56812648-56812667 | MsG0880045278.01.T01:CDS | 40.0% | |
| TCAGAATTAGGACACGCAAT+CGG | - | Chr8:56813388-56813407 | None:intergenic | 40.0% | |
| TCGTGTTAAGAGTCTCATGT+CGG | - | Chr8:56813528-56813547 | None:intergenic | 40.0% | |
| TCTAGATGGCTACCAAAAAC+TGG | + | Chr8:56812166-56812185 | MsG0880045278.01.T01:CDS | 40.0% | |
| TCTTAGGATGAAACTAGCTG+AGG | + | Chr8:56813939-56813958 | MsG0880045278.01.T01:CDS | 40.0% | |
| TGAAGACATGTCTGAGTATC+CGG | - | Chr8:56812937-56812956 | None:intergenic | 40.0% | |
| TTCAACTCTTGCATACTTCG+CGG | + | Chr8:56811839-56811858 | MsG0880045278.01.T01:CDS | 40.0% | |
| ! | GAAACAACACCTTTTGCAGA+TGG | - | Chr8:56812271-56812290 | None:intergenic | 40.0% |
| !! | AACCCTCTTTAAGACCTTTG+AGG | - | Chr8:56811960-56811979 | None:intergenic | 40.0% |
| !! | GATCAAGGTTCGCTTTTGAA+CGG | + | Chr8:56812500-56812519 | MsG0880045278.01.T01:CDS | 40.0% |
| !!! | GAGAGTTTTTTGCAGTCTAG+AGG | - | Chr8:56813655-56813674 | None:intergenic | 40.0% |
| AAAGCGAACCTTGATCGTTG+AGG | - | Chr8:56812496-56812515 | None:intergenic | 45.0% | |
| AAGGGTTGGACTTCAATTCG+AGG | + | Chr8:56812369-56812388 | MsG0880045278.01.T01:CDS | 45.0% | |
| CAACTAGTCCTCAACGATCA+AGG | + | Chr8:56812485-56812504 | MsG0880045278.01.T01:CDS | 45.0% | |
| CAAGCTAGAGCTGCATCAAA+TGG | + | Chr8:56813751-56813770 | MsG0880045278.01.T01:CDS | 45.0% | |
| CAGAATTAGGACACGCAATC+GGG | - | Chr8:56813387-56813406 | None:intergenic | 45.0% | |
| CTTGGGTCATGCTCAAGATA+TGG | - | Chr8:56813361-56813380 | None:intergenic | 45.0% | |
| GTGAGACTCTTAACACACCT+AGG | + | Chr8:56813309-56813328 | MsG0880045278.01.T01:intron | 45.0% | |
| TCTACACTGAAGACTCAGTC+AGG | + | Chr8:56811174-56811193 | MsG0880045278.01.T01:CDS | 45.0% | |
| TGTTACACACTGATATGGGC+CGG | + | Chr8:56812915-56812934 | MsG0880045278.01.T01:intron | 45.0% | |
| TTCTTCTCCGCCAGGAAAAT+CGG | - | Chr8:56811672-56811691 | None:intergenic | 45.0% | |
| ! | CTTTTTCCTGGTTTAGGTGC+AGG | + | Chr8:56813085-56813104 | MsG0880045278.01.T01:intron | 45.0% |
| !! | CTTTCGGTTTTGTCGAGTTC+CGG | - | Chr8:56813616-56813635 | None:intergenic | 45.0% |
| !! | GATCGTTGAGGACTAGTTGA+TGG | - | Chr8:56812484-56812503 | None:intergenic | 45.0% |
| !! | TGAGCGTGTGTTTGGTTCTA+CGG | - | Chr8:56811442-56811461 | None:intergenic | 45.0% |
| !! | TGTCGGTGCTACATAGAAAG+AGG | + | Chr8:56812965-56812984 | MsG0880045278.01.T01:intron | 45.0% |
| ACTCTTGCATACTTCGCGGT+TGG | + | Chr8:56811843-56811862 | MsG0880045278.01.T01:CDS | 50.0% | |
| CGGAACTCGACAAAACCGAA+AGG | + | Chr8:56813614-56813633 | MsG0880045278.01.T01:CDS | 50.0% | |
| GACACGCAATCGGGTAACTT+GGG | - | Chr8:56813378-56813397 | None:intergenic | 50.0% | |
| GCTAGAGCTGCATCAAATGG+TGG | + | Chr8:56813754-56813773 | MsG0880045278.01.T01:CDS | 50.0% | |
| TCAAATGCTTCTTCTCCGCC+AGG | - | Chr8:56811680-56811699 | None:intergenic | 50.0% | |
| TCTTCTCCGCCAGGAAAATC+GGG | - | Chr8:56811671-56811690 | None:intergenic | 50.0% | |
| ! | GTACAACTCCCCGATTTTCC+TGG | + | Chr8:56811659-56811678 | MsG0880045278.01.T01:CDS | 50.0% |
| !! | CAAGGTTCGCTTTTGAACGG+AGG | + | Chr8:56812503-56812522 | MsG0880045278.01.T01:CDS | 50.0% |
| !! | CGGTGCTACATAGAAAGAGG+AGG | + | Chr8:56812968-56812987 | MsG0880045278.01.T01:intron | 50.0% |
| ATACTCGGCAGCGCATCTTG+CGG | - | Chr8:56811762-56811781 | None:intergenic | 55.0% | |
| CTTCTCCGCCAGGAAAATCG+GGG | - | Chr8:56811670-56811689 | None:intergenic | 55.0% | |
| GGACACGCAATCGGGTAACT+TGG | - | Chr8:56813379-56813398 | None:intergenic | 55.0% | |
| ! | CAACTCCCCGATTTTCCTGG+CGG | + | Chr8:56811662-56811681 | MsG0880045278.01.T01:CDS | 55.0% |
| !! | GGTTCGCTTTTGAACGGAGG+AGG | + | Chr8:56812506-56812525 | MsG0880045278.01.T01:CDS | 55.0% |
| GGTCAGCCTGCACCTAAACC+AGG | - | Chr8:56813094-56813113 | None:intergenic | 60.0% | |
| TGAACGGAGGAGGTCGCGTT+CGG | + | Chr8:56812516-56812535 | MsG0880045278.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 56810969 | 56814171 | 56810969 | ID=MsG0880045278.01;Name=MsG0880045278.01 |
| Chr8 | mRNA | 56810969 | 56814171 | 56810969 | ID=MsG0880045278.01.T01;Parent=MsG0880045278.01;Name=MsG0880045278.01.T01;_AED=0.20;_eAED=0.20;_QI=168|1|1|1|1|1|4|64|601 |
| Chr8 | exon | 56810969 | 56811195 | 56810969 | ID=MsG0880045278.01.T01:exon:1167;Parent=MsG0880045278.01.T01 |
| Chr8 | exon | 56811301 | 56811370 | 56811301 | ID=MsG0880045278.01.T01:exon:1168;Parent=MsG0880045278.01.T01 |
| Chr8 | exon | 56811584 | 56812759 | 56811584 | ID=MsG0880045278.01.T01:exon:1169;Parent=MsG0880045278.01.T01 |
| Chr8 | exon | 56813607 | 56814171 | 56813607 | ID=MsG0880045278.01.T01:exon:1170;Parent=MsG0880045278.01.T01 |
| Chr8 | five_prime_UTR | 56810969 | 56811136 | 56810969 | ID=MsG0880045278.01.T01:five_prime_utr;Parent=MsG0880045278.01.T01 |
| Chr8 | CDS | 56811137 | 56811195 | 56811137 | ID=MsG0880045278.01.T01:cds;Parent=MsG0880045278.01.T01 |
| Chr8 | CDS | 56811301 | 56811370 | 56811301 | ID=MsG0880045278.01.T01:cds;Parent=MsG0880045278.01.T01 |
| Chr8 | CDS | 56811584 | 56812759 | 56811584 | ID=MsG0880045278.01.T01:cds;Parent=MsG0880045278.01.T01 |
| Chr8 | CDS | 56813607 | 56814107 | 56813607 | ID=MsG0880045278.01.T01:cds;Parent=MsG0880045278.01.T01 |
| Chr8 | three_prime_UTR | 56814108 | 56814171 | 56814108 | ID=MsG0880045278.01.T01:three_prime_utr;Parent=MsG0880045278.01.T01 |
| Gene Sequence |
| Protein sequence |
