AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040576.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040576.01.T01 MTR_7g093130 97.630 211 5 0 1 211 1 211 1.80e-151 422
MsG0780040576.01.T01 MTR_7g093130 96.454 141 5 0 71 211 1 141 9.55e-96 279
MsG0780040576.01.T01 MTR_1g053960 68.037 219 55 7 1 217 1 206 2.32e-91 270
MsG0780040576.01.T01 MTR_1g116940 55.294 170 70 3 44 211 3 168 8.60e-58 183
MsG0780040576.01.T01 MTR_1g053960 67.785 149 37 5 71 217 1 140 5.93e-55 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040576.01.T01 AT3G12130 47.196 214 47 4 1 212 1 150 5.01e-51 166
MsG0780040576.01.T01 AT5G06770 70.115 87 24 1 1 85 1 87 3.65e-37 130
MsG0780040576.01.T01 AT5G06770 46.552 116 53 4 103 212 38 150 5.47e-20 85.5
MsG0780040576.01.T01 AT5G06770 73.770 61 16 0 25 85 5 65 1.68e-26 102
MsG0780040576.01.T01 AT5G06770 46.552 116 53 4 103 212 16 128 3.20e-20 85.5
MsG0780040576.01.T01 AT5G06770 44.954 109 51 4 110 212 18 123 5.24e-17 76.6
MsG0780040576.01.T01 AT5G06770 62.791 43 16 0 43 85 18 60 7.91e-13 65.5
MsG0780040576.01.T01 AT5G06770 44.954 109 51 4 110 212 18 123 5.24e-17 76.6
MsG0780040576.01.T01 AT5G06770 62.791 43 16 0 43 85 18 60 7.91e-13 65.5
MsG0780040576.01.T01 AT5G06770 44.954 109 51 4 110 212 18 123 5.24e-17 76.6
MsG0780040576.01.T01 AT5G06770 62.791 43 16 0 43 85 18 60 7.91e-13 65.5
MsG0780040576.01.T01 AT3G12130 57.576 66 27 1 148 212 13 78 1.90e-14 68.9
MsG0780040576.01.T01 AT5G06770 60.345 58 22 1 155 212 22 78 3.32e-13 65.5

Find 124 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGGGGCTGGAACATTTC+TGG 0.073478 7:-79435026 None:intergenic
CATGATCTCGAATTGAAATT+TGG 0.146361 7:-79435401 None:intergenic
ATAGTTCCTGTTTATGAATT+TGG 0.163108 7:+79435959 MsG0780040576.01.T01:three_prime_UTR
AGTTCAATGTTTCTCAGATT+TGG 0.216072 7:-79435429 None:intergenic
GCAAAAGGATCTTGCACTTT+TGG 0.239220 7:+79435624 MsG0780040576.01.T01:three_prime_UTR
GGGAGCCATCATGGCGCCCC+TGG 0.239889 7:+79435555 MsG0780040576.01.T01:three_prime_UTR
ACTGCTGAAGGCTGCAAATT+TGG 0.247553 7:+79435115 MsG0780040576.01.T01:CDS
GGGAACATTTGAACAAATTA+AGG 0.249250 7:+79435455 MsG0780040576.01.T01:three_prime_UTR
CACTTCTTGCACCATGTTCC+TGG 0.251613 7:+79434947 MsG0780040576.01.T01:CDS
GGGGCGCCTTGGTTTGAATT+AGG 0.279247 7:-79435531 None:intergenic
ATTGTTGTGCATTGCTCCTT+AGG 0.286515 7:+79435756 MsG0780040576.01.T01:three_prime_UTR
TTTCTTCCTCCGCTAGGGTT+AGG 0.294576 7:+79431817 MsG0780040576.01.T01:five_prime_UTR
GTTCAATGTTTCTCAGATTT+GGG 0.294737 7:-79435428 None:intergenic
CGTGGGGCTGGAACATTTCT+GGG 0.304605 7:-79435025 None:intergenic
AGCACTTCTGGCTGCCCATT+TGG 0.307249 7:+79434914 MsG0780040576.01.T01:intron
TTCTTCCTCCGCTAGGGTTA+GGG 0.310403 7:+79431818 MsG0780040576.01.T01:five_prime_UTR
TAGGTGGTGCAGACATTTGC+AGG 0.328616 7:-79435512 None:intergenic
CTGCCAAAACGGCCAGCATT+GGG 0.346406 7:-79435238 None:intergenic
GGAGCCATCATGGCGCCCCT+GGG 0.353900 7:+79435556 MsG0780040576.01.T01:three_prime_UTR
GACAGTGCACCGCCTCATTA+AGG 0.356934 7:-79435701 None:intergenic
CCTCCTGTTCCAGCTAGCTT+TGG 0.360587 7:+79435277 MsG0780040576.01.T01:CDS
AAGGCGGTGGCTGTGATAAA+AGG 0.361237 7:-79431778 None:intergenic
CAGGTGTTAGATTCATCATC+TGG 0.374375 7:-79434988 None:intergenic
ATTGTTGTTGAATCCATGTT+CGG 0.378655 7:-79431898 None:intergenic
AAGCTAATGTTGCTATTTGA+AGG 0.387043 7:-79435822 None:intergenic
GGGCGCCATGATGGCTCCCA+GGG 0.388208 7:-79435551 None:intergenic
GTCATTTCGCCCACGGAGAA+TGG 0.389283 7:+79435146 MsG0780040576.01.T01:CDS
GGGGCGCCATGATGGCTCCC+AGG 0.397524 7:-79435552 None:intergenic
AGTGTTGAAGCCTCCTTGGC+TGG 0.405561 7:+79435322 MsG0780040576.01.T01:CDS
GGCTGGAGCTATCATTGGTA+AGG 0.406355 7:+79435339 MsG0780040576.01.T01:CDS
GCTTCCTACACCAGTTGATA+AGG 0.410010 7:-79432680 None:intergenic
TGGGCGCATGTGCATTTCGT+GGG 0.412329 7:-79435042 None:intergenic
TTGTTGTTGAATCCATGTTC+GGG 0.412697 7:-79431897 None:intergenic
AAACAGATCTGTCGTCAAAC+TGG 0.418288 7:+79435376 MsG0780040576.01.T01:CDS
AATTCAAACCAAGGCGCCCC+TGG 0.420452 7:+79435534 MsG0780040576.01.T01:three_prime_UTR
GGAGGCTTCAACACTGATCT+TGG 0.422971 7:-79435314 None:intergenic
CAATCTGATGAGGGAGAGAA+TGG 0.423046 7:-79435876 None:intergenic
ACTGCCAAAACGGCCAGCAT+TGG 0.424303 7:-79435239 None:intergenic
AGCAGATGGCGCAGAACCAT+TGG 0.426240 7:-79435062 None:intergenic
AAGTGGCAGCTCTCACCAAA+TGG 0.432857 7:-79434929 None:intergenic
GATGGCTCCCAGGGGCGCCT+TGG 0.436453 7:-79435542 None:intergenic
GCAACACCAAATTCATAAAC+AGG 0.440180 7:-79435965 None:intergenic
GCTGGAACATTTCTGGGTGC+AGG 0.442312 7:-79435019 None:intergenic
GCAGATGGCGCAGAACCATT+GGG 0.447775 7:-79435061 None:intergenic
CTGGGTGCAGGAGGTGCTGC+AGG 0.454430 7:-79435007 None:intergenic
GCACCAAAGCTAGCTGGAAC+AGG 0.460612 7:-79435280 None:intergenic
GATCAGTGTTGAAGCCTCCT+TGG 0.462907 7:+79435318 MsG0780040576.01.T01:CDS
TCCTCTCTTGCGCATATCCA+TGG 0.463127 7:-79431871 None:intergenic
TTGTTGTGCATTGCTCCTTA+GGG 0.470128 7:+79435757 MsG0780040576.01.T01:three_prime_UTR
TCATTTCGCCCACGGAGAAT+GGG 0.473005 7:+79435147 MsG0780040576.01.T01:CDS
ACAGAACACTACTGCTGCTA+CGG 0.475949 7:-79435909 None:intergenic
GGCGCCCCTGGGAGCCATCA+TGG 0.476164 7:+79435546 MsG0780040576.01.T01:three_prime_UTR
GAGCCATCATGGCGCCCCTG+GGG 0.478693 7:+79435557 MsG0780040576.01.T01:three_prime_UTR
GCATGTGCATTTCGTGGGGC+TGG 0.479969 7:-79435037 None:intergenic
TTGGGCGCATGTGCATTTCG+TGG 0.481654 7:-79435043 None:intergenic
GAAATGGAGTCCTTATCAAC+TGG 0.481779 7:+79432670 MsG0780040576.01.T01:intron
CCATCCGATGACTGCCAAAA+CGG 0.482989 7:-79435249 None:intergenic
GGTGCACTGTCGTGTCAGAC+AGG 0.483317 7:+79435713 MsG0780040576.01.T01:three_prime_UTR
TCCTTGGCTGGAGCTATCAT+TGG 0.488960 7:+79435334 MsG0780040576.01.T01:CDS
GCCCACGGAGAATGGGAACT+TGG 0.492658 7:+79435154 MsG0780040576.01.T01:CDS
TCATCAAATGATGGAGCTAC+AGG 0.495349 7:-79435181 None:intergenic
CTGAGAAACATTGAACTTGA+GGG 0.498316 7:+79435435 MsG0780040576.01.T01:exon
GCATTTGCACCAAAGCTAGC+TGG 0.505722 7:-79435286 None:intergenic
ATGAAAATCTTACCTTAATG+AGG 0.513346 7:+79435689 MsG0780040576.01.T01:three_prime_UTR
AAGCTAGCTGGAACAGGAGG+AGG 0.517450 7:-79435274 None:intergenic
GCCAAAACGGCCAGCATTGG+GGG 0.527237 7:-79435236 None:intergenic
TCTGAGAAACATTGAACTTG+AGG 0.528852 7:+79435434 MsG0780040576.01.T01:exon
AGTGGCAGCTCTCACCAAAT+GGG 0.532140 7:-79434928 None:intergenic
CAGAACACTACTGCTGCTAC+GGG 0.544619 7:-79435908 None:intergenic
CATTATAACCGCCAGGAACA+TGG 0.547838 7:-79434958 None:intergenic
TCTTCCTCCGCTAGGGTTAG+GGG 0.549791 7:+79431819 MsG0780040576.01.T01:five_prime_UTR
GCGCCTTGGTTTGAATTAGG+TGG 0.551052 7:-79435528 None:intergenic
TGCCAAAACGGCCAGCATTG+GGG 0.551878 7:-79435237 None:intergenic
CAAGATTCGATCTCGATCCA+TGG 0.552952 7:+79431854 MsG0780040576.01.T01:exon
TCACAATGGTCACCGTCACA+TGG 0.555494 7:+79435210 MsG0780040576.01.T01:CDS
ACTATGATAAGTTCAGTGTA+GGG 0.555898 7:-79435941 None:intergenic
TTCAACACTGATCTTGGCAG+TGG 0.556993 7:-79435308 None:intergenic
AGCCATCATGGCGCCCCTGG+GGG 0.557104 7:+79435558 MsG0780040576.01.T01:three_prime_UTR
GGAACATTTCTGGGTGCAGG+AGG 0.557375 7:-79435016 None:intergenic
CGGAGGAAGAAAAGAAAAGA+GGG 0.567299 7:-79431806 None:intergenic
AACTATGATAAGTTCAGTGT+AGG 0.569604 7:-79435942 None:intergenic
ACCAAGTTCCCATTCTCCGT+GGG 0.571356 7:-79435155 None:intergenic
GACAAATGTCATTTCGCCCA+CGG 0.574168 7:+79435139 MsG0780040576.01.T01:CDS
GGAGCTATCATTGGTAAGGG+TGG 0.574888 7:+79435343 MsG0780040576.01.T01:CDS
GAGTCCTTATCAACTGGTGT+AGG 0.575007 7:+79432676 MsG0780040576.01.T01:CDS
ATTCAAACCAAGGCGCCCCT+GGG 0.575007 7:+79435535 MsG0780040576.01.T01:three_prime_UTR
GCGGAGGAAGAAAAGAAAAG+AGG 0.576822 7:-79431807 None:intergenic
CGAAATGCACATGCGCCCAA+TGG 0.577209 7:+79435046 MsG0780040576.01.T01:CDS
TATTAAACTTGCTGCATATG+CGG 0.578734 7:-79435093 None:intergenic
GCTGGAGCTATCATTGGTAA+GGG 0.579604 7:+79435340 MsG0780040576.01.T01:CDS
TACCAAGTTCCCATTCTCCG+TGG 0.580757 7:-79435156 None:intergenic
CAGGAACATGGTGCAAGAAG+TGG 0.580928 7:-79434946 None:intergenic
TGTTTATGAATTTGGTGTTG+CGG 0.583869 7:+79435967 MsG0780040576.01.T01:three_prime_UTR
GGATGCAAGCAACATGGTGA+AGG 0.586493 7:+79435476 MsG0780040576.01.T01:three_prime_UTR
TGACGGTGATCATCAAATGA+TGG 0.598806 7:-79435190 None:intergenic
ACCAATGATAGCTCCAGCCA+AGG 0.601213 7:-79435335 None:intergenic
AGCAAGTTTAATACTGCTGA+AGG 0.610803 7:+79435103 MsG0780040576.01.T01:CDS
CACAATGGTCACCGTCACAT+GGG 0.612054 7:+79435211 MsG0780040576.01.T01:CDS
GAACATGGATTCAACAACAA+TGG 0.613103 7:+79431900 MsG0780040576.01.T01:CDS
GTGCACTGTCGTGTCAGACA+GGG 0.614557 7:+79435714 MsG0780040576.01.T01:three_prime_UTR
GAAACAGCATTATAACCGCC+AGG 0.616377 7:-79434965 None:intergenic
TAAGTCCTGTCAGTACCCTA+AGG 0.617456 7:-79435772 None:intergenic
TACAGTCAACAATCTGATGA+GGG 0.620247 7:-79435885 None:intergenic
TCCATGGATATGCGCAAGAG+AGG 0.620448 7:+79431870 MsG0780040576.01.T01:exon
CCAAAGCTAGCTGGAACAGG+AGG 0.620733 7:-79435277 None:intergenic
AGGTGTTAGATTCATCATCT+GGG 0.623445 7:-79434987 None:intergenic
GGCGCCATGATGGCTCCCAG+GGG 0.626200 7:-79435550 None:intergenic
TTGCTCCTTAGGGTACTGAC+AGG 0.626554 7:+79435767 MsG0780040576.01.T01:three_prime_UTR
GTACAGTCAACAATCTGATG+AGG 0.628204 7:-79435886 None:intergenic
TTTGATGATCACCGTCACAA+TGG 0.633364 7:+79435196 MsG0780040576.01.T01:CDS
CCAAAACGGCCAGCATTGGG+GGG 0.633415 7:-79435235 None:intergenic
AAAATCTTACCTTAATGAGG+CGG 0.634934 7:+79435692 MsG0780040576.01.T01:three_prime_UTR
AAGAGAGGAAGACCCGAACA+TGG 0.639026 7:+79431885 MsG0780040576.01.T01:CDS
AATTAAGGATGCAAGCAACA+TGG 0.639069 7:+79435470 MsG0780040576.01.T01:three_prime_UTR
GGGCGCATGTGCATTTCGTG+GGG 0.653124 7:-79435041 None:intergenic
AGGTGGTGCAGACATTTGCA+GGG 0.654364 7:-79435511 None:intergenic
GCACCACCTAATTCAAACCA+AGG 0.655471 7:+79435525 MsG0780040576.01.T01:three_prime_UTR
TTCTTGCACCATGTTCCTGG+CGG 0.668994 7:+79434950 MsG0780040576.01.T01:CDS
CATGGATTCAACAACAATGG+CGG 0.674602 7:+79431903 MsG0780040576.01.T01:CDS
TAAACCCCTAACCCTAGCGG+AGG 0.677901 7:-79431823 None:intergenic
AATGATAGCTCCAGCCAAGG+AGG 0.680423 7:-79435332 None:intergenic
GGATTCAAGAAATCCAGACA+TGG 0.691625 7:+79431924 MsG0780040576.01.T01:CDS
GAGTAAACCCCTAACCCTAG+CGG 0.721760 7:-79431826 None:intergenic
TGTGACGGTGACCATTGTGA+CGG 0.721866 7:-79435207 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTAAAAATTTAATT+TGG + Chr7:79434173-79434192 MsG0780040576.01.T01:intron 0.0%
!! TGTATTATTATTATTGTTAT+TGG + Chr7:79432086-79432105 MsG0780040576.01.T01:intron 10.0%
!! AAACTAATAATTTATGTGTA+CGG - Chr7:79433233-79433252 None:intergenic 15.0%
!! AATTCAGTTGAAATATAAAA+TGG + Chr7:79434043-79434062 MsG0780040576.01.T01:intron 15.0%
!! ATTCAGTTGAAATATAAAAT+GGG + Chr7:79434044-79434063 MsG0780040576.01.T01:intron 15.0%
!! TACTTATAATTTATTTAGAC+AGG - Chr7:79432748-79432767 None:intergenic 15.0%
!! TGCTTTATAATTATATGAAA+AGG - Chr7:79433630-79433649 None:intergenic 15.0%
!!! ACACAATTTTAAAACTTTTA+GGG - Chr7:79432314-79432333 None:intergenic 15.0%
!!! AGTTAATTTCCAATTTTTAT+CGG + Chr7:79432128-79432147 MsG0780040576.01.T01:intron 15.0%
!!! ATATATTTGTTTTTTGTCAT+TGG + Chr7:79434236-79434255 MsG0780040576.01.T01:intron 15.0%
!!! TGATGTTAAAATTTTTAAAG+TGG - Chr7:79433096-79433115 None:intergenic 15.0%
!!! TTTAAAATATATACAGACTT+GGG - Chr7:79432565-79432584 None:intergenic 15.0%
!!! TTTTAAAATATATACAGACT+TGG - Chr7:79432566-79432585 None:intergenic 15.0%
!!! TTTTCATATAATTATAAAGC+AGG + Chr7:79433629-79433648 MsG0780040576.01.T01:intron 15.0%
!! AAAAGACATATGTGTAATAT+GGG - Chr7:79434470-79434489 None:intergenic 20.0%
!! AAATTGTGCTATAATTAACT+CGG + Chr7:79432882-79432901 MsG0780040576.01.T01:intron 20.0%
!! AATTGTCAATAATTTCAGAT+TGG + Chr7:79432175-79432194 MsG0780040576.01.T01:intron 20.0%
!! ATAAACAATAAAATCCACTA+CGG - Chr7:79433129-79433148 None:intergenic 20.0%
!! ATATCTTGTCAAATAATTCA+TGG + Chr7:79434785-79434804 MsG0780040576.01.T01:intron 20.0%
!! CTAAAAATCATACAAATTCA+TGG - Chr7:79432012-79432031 None:intergenic 20.0%
!! GCTATTAAAAGTAGAAATTA+TGG - Chr7:79432792-79432811 None:intergenic 20.0%
!! TAAAAGACATATGTGTAATA+TGG - Chr7:79434471-79434490 None:intergenic 20.0%
!! TGAAATTATTGACAATTACA+AGG - Chr7:79432172-79432191 None:intergenic 20.0%
!! TTAAAATATATACAGACTTG+GGG - Chr7:79432564-79432583 None:intergenic 20.0%
!! TTATTCATTCATATGTATCT+GGG + Chr7:79434555-79434574 MsG0780040576.01.T01:intron 20.0%
!!! AGAAAATAGAGACATTTTTA+TGG + Chr7:79433260-79433279 MsG0780040576.01.T01:intron 20.0%
!!! AGAATGGATTTTCATAATAA+GGG - Chr7:79435863-79435882 None:intergenic 20.0%
!!! ATAAGTAATCAATTTTGTTG+AGG + Chr7:79433540-79433559 MsG0780040576.01.T01:intron 20.0%
!!! ATAATGTTTTGTAACAGAAA+TGG + Chr7:79432654-79432673 MsG0780040576.01.T01:intron 20.0%
!!! CACAGCAAATTTTAAAAAAT+TGG - Chr7:79432261-79432280 None:intergenic 20.0%
!!! CATGAATTTGTATGATTTTT+AGG + Chr7:79432010-79432029 MsG0780040576.01.T01:intron 20.0%
!!! GAAATTTTACCGATAAAAAT+TGG - Chr7:79432140-79432159 None:intergenic 20.0%
!!! GACACAATTTTAAAACTTTT+AGG - Chr7:79432315-79432334 None:intergenic 20.0%
!!! TTCTTTTAAATTTTTGCCTT+TGG + Chr7:79433596-79433615 MsG0780040576.01.T01:intron 20.0%
! AATGGTCAATTTATCATTGA+TGG - Chr7:79433035-79433054 None:intergenic 25.0%
! AATTATAAAGCAGGATAAGT+TGG + Chr7:79433638-79433657 MsG0780040576.01.T01:intron 25.0%
! AGATTATAACCTGAAAAACT+TGG - Chr7:79432722-79432741 None:intergenic 25.0%
! AGTTAAAGAACATCTCTAAT+AGG - Chr7:79434136-79434155 None:intergenic 25.0%
! ATAGTTCCTGTTTATGAATT+TGG + Chr7:79435959-79435978 MsG0780040576.01.T01:three_prime_UTR 25.0%
! ATGAAAATCTTACCTTAATG+AGG + Chr7:79435689-79435708 MsG0780040576.01.T01:three_prime_UTR 25.0%
! CTTATTCATTCATATGTATC+TGG + Chr7:79434554-79434573 MsG0780040576.01.T01:intron 25.0%
! GATATGAACATGAGTAAAAA+TGG - Chr7:79433053-79433072 None:intergenic 25.0%
! GTAAGAGATTAATAAATGAG+AGG + Chr7:79432611-79432630 MsG0780040576.01.T01:intron 25.0%
! GTTAAAGAACATCTCTAATA+GGG - Chr7:79434135-79434154 None:intergenic 25.0%
! TAAACAAGTAAACACATTAG+TGG + Chr7:79432946-79432965 MsG0780040576.01.T01:intron 25.0%
! TAAACAATAAAATCCACTAC+GGG - Chr7:79433128-79433147 None:intergenic 25.0%
! TATTCATTCATATGTATCTG+GGG + Chr7:79434556-79434575 MsG0780040576.01.T01:intron 25.0%
! TTAAAGAACATCTCTAATAG+GGG - Chr7:79434134-79434153 None:intergenic 25.0%
!! AACTTTCATGCGTATATTTT+TGG + Chr7:79433685-79433704 MsG0780040576.01.T01:intron 25.0%
!! AAGTTCAATTCATGTTACTT+AGG - Chr7:79433181-79433200 None:intergenic 25.0%
!! AGAAAAATTGATTTCTACAG+AGG - Chr7:79433580-79433599 None:intergenic 25.0%
!! AGAACAAAGGTGTATTAATT+AGG - Chr7:79434670-79434689 None:intergenic 25.0%
!! CATATGTCTTTTATACTGTT+TGG + Chr7:79434478-79434497 MsG0780040576.01.T01:intron 25.0%
!! GTATATGAAGCTTTTATTAC+AGG + Chr7:79432904-79432923 MsG0780040576.01.T01:intron 25.0%
!! TAACATGAATTGAACTTGTT+TGG + Chr7:79433184-79433203 MsG0780040576.01.T01:intron 25.0%
!! TTACATGCACTATTCTAAAA+TGG + Chr7:79434404-79434423 MsG0780040576.01.T01:intron 25.0%
!! TTAGAATTGTTTCTTGTTCA+AGG - Chr7:79433297-79433316 None:intergenic 25.0%
!!! ATCATTGATTTGATTCAAAC+TGG + Chr7:79433880-79433899 MsG0780040576.01.T01:intron 25.0%
!!! GAGAATGGATTTTCATAATA+AGG - Chr7:79435864-79435883 None:intergenic 25.0%
!!! TTACTCAACTTTTCAAGAAT+TGG + Chr7:79433802-79433821 MsG0780040576.01.T01:intron 25.0%
AAAATCTTACCTTAATGAGG+CGG + Chr7:79435692-79435711 MsG0780040576.01.T01:three_prime_UTR 30.0%
AAACAATTCTAATCGATCTC+AGG + Chr7:79433305-79433324 MsG0780040576.01.T01:intron 30.0%
AAACATACAGCACAAACATT+TGG - Chr7:79434504-79434523 None:intergenic 30.0%
AACTATGATAAGTTCAGTGT+AGG - Chr7:79435945-79435964 None:intergenic 30.0%
ACCATTAGAGAAACAATAAG+AGG - Chr7:79433378-79433397 None:intergenic 30.0%
ACTATGATAAGTTCAGTGTA+GGG - Chr7:79435944-79435963 None:intergenic 30.0%
AGACGATAAAATGGCAATAA+TGG - Chr7:79433727-79433746 None:intergenic 30.0%
AGTTCAATGTTTCTCAGATT+TGG - Chr7:79435432-79435451 None:intergenic 30.0%
ATTCATTCATATGTATCTGG+GGG + Chr7:79434557-79434576 MsG0780040576.01.T01:intron 30.0%
CATGATCTCGAATTGAAATT+TGG - Chr7:79435404-79435423 None:intergenic 30.0%
CCATTAGAGAAACAATAAGA+GGG - Chr7:79433377-79433396 None:intergenic 30.0%
CTTGTCAAATAATTCATGGT+GGG + Chr7:79434789-79434808 MsG0780040576.01.T01:intron 30.0%
GGGAACATTTGAACAAATTA+AGG + Chr7:79435455-79435474 MsG0780040576.01.T01:three_prime_UTR 30.0%
GTTCAATGTTTCTCAGATTT+GGG - Chr7:79435431-79435450 None:intergenic 30.0%
TAAAAAAAACGAACCATGTC+TGG - Chr7:79431940-79431959 None:intergenic 30.0%
TACAGGTACAAACTGTTATT+TGG + Chr7:79432921-79432940 MsG0780040576.01.T01:intron 30.0%
TCTTGTCAAATAATTCATGG+TGG + Chr7:79434788-79434807 MsG0780040576.01.T01:intron 30.0%
TGATTTGATTCAAACTGGTT+AGG + Chr7:79433885-79433904 MsG0780040576.01.T01:intron 30.0%
TGGTCAAATATTCAGTAGTT+GGG + Chr7:79432195-79432214 MsG0780040576.01.T01:intron 30.0%
TGTTTCTTGTTCAAGGTTTA+TGG - Chr7:79433290-79433309 None:intergenic 30.0%
TTACAAGTCAAAATGTGTGA+AGG + Chr7:79433839-79433858 MsG0780040576.01.T01:intron 30.0%
TTGGTCAAATATTCAGTAGT+TGG + Chr7:79432194-79432213 MsG0780040576.01.T01:intron 30.0%
! ATCAATTTTGTTGAGGTGAA+TGG + Chr7:79433547-79433566 MsG0780040576.01.T01:intron 30.0%
! ATGAAATTCTGGAAAATCCT+AGG + Chr7:79433779-79433798 MsG0780040576.01.T01:intron 30.0%
! ATTCGTCAATTGTTTCTTGA+TGG - Chr7:79433349-79433368 None:intergenic 30.0%
! ATTGTTGTTGAATCCATGTT+CGG - Chr7:79431901-79431920 None:intergenic 30.0%
! CATGTCATTTGTATCATCAT+TGG + Chr7:79434850-79434869 MsG0780040576.01.T01:intron 30.0%
! GGATTTTCCAGAATTTCATA+CGG - Chr7:79433778-79433797 None:intergenic 30.0%
! TCAATTTTGTTGAGGTGAAT+GGG + Chr7:79433548-79433567 MsG0780040576.01.T01:intron 30.0%
! TGAATTGAACTTGTTTGGTT+CGG + Chr7:79433189-79433208 MsG0780040576.01.T01:intron 30.0%
! TTATGAACCAACCTTTTGAT+CGG + Chr7:79433145-79433164 MsG0780040576.01.T01:intron 30.0%
! TTTTGTTCCGTATGAAATTC+TGG + Chr7:79433768-79433787 MsG0780040576.01.T01:intron 30.0%
!! AAAAGAAAAGAGGGTTTTGA+AGG - Chr7:79431800-79431819 None:intergenic 30.0%
!! AAGCTAATGTTGCTATTTGA+AGG - Chr7:79435825-79435844 None:intergenic 30.0%
!! ATTGGTTGTTTCTGTGTAAT+TGG + Chr7:79432104-79432123 MsG0780040576.01.T01:intron 30.0%
!! CAAAGTGTAGTCTTTTAAGT+AGG - Chr7:79432986-79433005 None:intergenic 30.0%
!! GTTTCGTATAAGCTATTTCT+TGG + Chr7:79432459-79432478 MsG0780040576.01.T01:intron 30.0%
!! TATTAAACTTGCTGCATATG+CGG - Chr7:79435096-79435115 None:intergenic 30.0%
!! TGTTTATGAATTTGGTGTTG+CGG + Chr7:79435967-79435986 MsG0780040576.01.T01:three_prime_UTR 30.0%
!!! GTGAAGTCTTTTTAGAATGT+TGG + Chr7:79434263-79434282 MsG0780040576.01.T01:intron 30.0%
!!! TATTGCCATTTTATCGTCTA+CGG + Chr7:79433728-79433747 MsG0780040576.01.T01:intron 30.0%
!!! TTTTCAAGTTGTTTCCATGA+TGG - Chr7:79435584-79435603 None:intergenic 30.0%
AAATGAGAGGATGTTAACTG+AGG + Chr7:79432624-79432643 MsG0780040576.01.T01:intron 35.0%
AACCTGAAAAACTTGGTACA+TGG - Chr7:79432715-79432734 None:intergenic 35.0%
AAGGGATACAGTAAACAATG+AGG - Chr7:79433437-79433456 None:intergenic 35.0%
AATTAAGGATGCAAGCAACA+TGG + Chr7:79435470-79435489 MsG0780040576.01.T01:three_prime_UTR 35.0%
ACAGTAAACAATGAGGAAAG+TGG - Chr7:79433430-79433449 None:intergenic 35.0%
AGCAAGTTTAATACTGCTGA+AGG + Chr7:79435103-79435122 MsG0780040576.01.T01:CDS 35.0%
AGCATTTGAGAGTTTATGAC+TGG + Chr7:79434610-79434629 MsG0780040576.01.T01:intron 35.0%
AGGTGTTAGATTCATCATCT+GGG - Chr7:79434990-79435009 None:intergenic 35.0%
ATATATAGAGAGAGAGAGAG+AGG - Chr7:79434721-79434740 None:intergenic 35.0%
ATGCAAAGTAGATCTGTGAA+TGG + Chr7:79434636-79434655 MsG0780040576.01.T01:intron 35.0%
CTGAGAAACATTGAACTTGA+GGG + Chr7:79435435-79435454 MsG0780040576.01.T01:exon 35.0%
CTTAAAAGACTACACTTTGC+AGG + Chr7:79432987-79433006 MsG0780040576.01.T01:intron 35.0%
CTTGAAAAGTTGAGTAACCT+AGG - Chr7:79433799-79433818 None:intergenic 35.0%
GAACATGGATTCAACAACAA+TGG + Chr7:79431900-79431919 MsG0780040576.01.T01:CDS 35.0%
GACAGAGCAGAAAAACAAAA+GGG - Chr7:79433455-79433474 None:intergenic 35.0%
GCAACACCAAATTCATAAAC+AGG - Chr7:79435968-79435987 None:intergenic 35.0%
GGTCAAATATTCAGTAGTTG+GGG + Chr7:79432196-79432215 MsG0780040576.01.T01:intron 35.0%
TACAGTCAACAATCTGATGA+GGG - Chr7:79435888-79435907 None:intergenic 35.0%
TCTGAGAAACATTGAACTTG+AGG + Chr7:79435434-79435453 MsG0780040576.01.T01:exon 35.0%
TGAACACACGAACATAATCT+AGG + Chr7:79433948-79433967 MsG0780040576.01.T01:intron 35.0%
TGACAGAGCAGAAAAACAAA+AGG - Chr7:79433456-79433475 None:intergenic 35.0%
TTAGAGAAACAATAAGAGGG+TGG - Chr7:79433374-79433393 None:intergenic 35.0%
TTCATTCATATGTATCTGGG+GGG + Chr7:79434558-79434577 MsG0780040576.01.T01:intron 35.0%
! CCCTCTTATTGTTTCTCTAA+TGG + Chr7:79433374-79433393 MsG0780040576.01.T01:intron 35.0%
! CTGTGTGAGAATTTTGCAAA+AGG + Chr7:79435609-79435628 MsG0780040576.01.T01:three_prime_UTR 35.0%
! GTGCTGTATGTTTTCCTTTA+AGG + Chr7:79434511-79434530 MsG0780040576.01.T01:intron 35.0%
! TTGTATTGATGCTCTTATGC+AGG + Chr7:79434813-79434832 MsG0780040576.01.T01:intron 35.0%
! TTGTTGTTGAATCCATGTTC+GGG - Chr7:79431900-79431919 None:intergenic 35.0%
!! TAATATGTAGAGCGTCGTTT+GGG + Chr7:79434339-79434358 MsG0780040576.01.T01:intron 35.0%
!!! GAAAGATGTCATTTTGCACA+TGG + Chr7:79435648-79435667 MsG0780040576.01.T01:three_prime_UTR 35.0%
!!! TTTTTGTTTTGCAGCACTTC+TGG + Chr7:79434902-79434921 MsG0780040576.01.T01:intron 35.0%
AAACAGATCTGTCGTCAAAC+TGG + Chr7:79435376-79435395 MsG0780040576.01.T01:CDS 40.0%
AAGCTCCGTAGACGATAAAA+TGG - Chr7:79433736-79433755 None:intergenic 40.0%
AATAAGCTGTTTGTCCAGAC+AGG - Chr7:79432356-79432375 None:intergenic 40.0%
ACACTTTGCAGGACAATAGT+TGG + Chr7:79432998-79433017 MsG0780040576.01.T01:intron 40.0%
ATAAGCTGTTTGTCCAGACA+GGG - Chr7:79432355-79432374 None:intergenic 40.0%
ATTGTTGTGCATTGCTCCTT+AGG + Chr7:79435756-79435775 MsG0780040576.01.T01:three_prime_UTR 40.0%
CACTTTGCAGGACAATAGTT+GGG + Chr7:79432999-79433018 MsG0780040576.01.T01:intron 40.0%
CAGGTGTTAGATTCATCATC+TGG - Chr7:79434991-79435010 None:intergenic 40.0%
CATGGATTCAACAACAATGG+CGG + Chr7:79431903-79431922 MsG0780040576.01.T01:CDS 40.0%
CGGAGGAAGAAAAGAAAAGA+GGG - Chr7:79431809-79431828 None:intergenic 40.0%
GAAATGGAGTCCTTATCAAC+TGG + Chr7:79432670-79432689 MsG0780040576.01.T01:intron 40.0%
GGATTCAAGAAATCCAGACA+TGG + Chr7:79431924-79431943 MsG0780040576.01.T01:CDS 40.0%
GTACAGTCAACAATCTGATG+AGG - Chr7:79435889-79435908 None:intergenic 40.0%
GTACCAAGTGAAAAGAACAC+AGG - Chr7:79434110-79434129 None:intergenic 40.0%
TAACAGTTACAGCCAATGTC+TGG - Chr7:79434387-79434406 None:intergenic 40.0%
TAATATGGGACAGATCTAGC+AGG - Chr7:79434456-79434475 None:intergenic 40.0%
TAGCTTACCGATCAAAAGGT+TGG - Chr7:79433155-79433174 None:intergenic 40.0%
TATTGATGCTCTTATGCAGG+TGG + Chr7:79434816-79434835 MsG0780040576.01.T01:intron 40.0%
TCAGATAAGCCAATCCAAAC+AGG + Chr7:79432538-79432557 MsG0780040576.01.T01:intron 40.0%
TCCAACACTGAGATCCTTAA+AGG - Chr7:79434528-79434547 None:intergenic 40.0%
TGAAAAGGTCAGACAACCAA+AGG - Chr7:79433615-79433634 None:intergenic 40.0%
TGACGGTGATCATCAAATGA+TGG - Chr7:79435193-79435212 None:intergenic 40.0%
TGGTAAAAACGAAAGCGAAG+CGG - Chr7:79431992-79432011 None:intergenic 40.0%
TTGTTGTGCATTGCTCCTTA+GGG + Chr7:79435757-79435776 MsG0780040576.01.T01:three_prime_UTR 40.0%
! AGCCATGTACCAAGTTTTTC+AGG + Chr7:79432710-79432729 MsG0780040576.01.T01:CDS 40.0%
! GATCCTGTGTTCTTTTCACT+TGG + Chr7:79434104-79434123 MsG0780040576.01.T01:intron 40.0%
! GCAAAAGGATCTTGCACTTT+TGG + Chr7:79435624-79435643 MsG0780040576.01.T01:three_prime_UTR 40.0%
! TCATCAAATGATGGAGCTAC+AGG - Chr7:79435184-79435203 None:intergenic 40.0%
! TCCTTTAAGGATCTCAGTGT+TGG + Chr7:79434524-79434543 MsG0780040576.01.T01:intron 40.0%
! TGGTCTGCAATGTTTGAAGT+TGG + Chr7:79433394-79433413 MsG0780040576.01.T01:intron 40.0%
! TGTGTCACTCTACAAAGCAA+GGG + Chr7:79432329-79432348 MsG0780040576.01.T01:intron 40.0%
! TTGTGTCACTCTACAAAGCA+AGG + Chr7:79432328-79432347 MsG0780040576.01.T01:intron 40.0%
! TTTCTTTTCTTCCTCCGCTA+GGG + Chr7:79431812-79431831 MsG0780040576.01.T01:five_prime_UTR 40.0%
! TTTGATGATCACCGTCACAA+TGG + Chr7:79435196-79435215 MsG0780040576.01.T01:CDS 40.0%
! TTTTCTTTTCTTCCTCCGCT+AGG + Chr7:79431811-79431830 MsG0780040576.01.T01:five_prime_UTR 40.0%
!! GTAATATGTAGAGCGTCGTT+TGG + Chr7:79434338-79434357 MsG0780040576.01.T01:intron 40.0%
!! TAAGTGTCCTAGAAGTGTCT+GGG + Chr7:79434287-79434306 MsG0780040576.01.T01:intron 40.0%
!! TTAAGTGTCCTAGAAGTGTC+TGG + Chr7:79434286-79434305 MsG0780040576.01.T01:intron 40.0%
!!! AGAAAAGAGGGTTTTGAAGG+CGG - Chr7:79431797-79431816 None:intergenic 40.0%
ACAGAACACTACTGCTGCTA+CGG - Chr7:79435912-79435931 None:intergenic 45.0%
ACTGCATGTGTGTGTACTTG+TGG + Chr7:79433981-79434000 MsG0780040576.01.T01:intron 45.0%
ACTGCTGAAGGCTGCAAATT+TGG + Chr7:79435115-79435134 MsG0780040576.01.T01:CDS 45.0%
ATCTAGCAGGCCAACTTCAA+AGG - Chr7:79434443-79434462 None:intergenic 45.0%
CAAGATTCGATCTCGATCCA+TGG + Chr7:79431854-79431873 MsG0780040576.01.T01:exon 45.0%
CAATCTGATGAGGGAGAGAA+TGG - Chr7:79435879-79435898 None:intergenic 45.0%
CATTATAACCGCCAGGAACA+TGG - Chr7:79434961-79434980 None:intergenic 45.0%
CCAACTTCAAAGGATCACAC+AGG - Chr7:79434433-79434452 None:intergenic 45.0%
GAAACAGCATTATAACCGCC+AGG - Chr7:79434968-79434987 None:intergenic 45.0%
GAGAGAGAGAGAGAGAACAA+AGG - Chr7:79434683-79434702 None:intergenic 45.0%
GAGTCCTTATCAACTGGTGT+AGG + Chr7:79432676-79432695 MsG0780040576.01.T01:CDS 45.0%
GCACCACCTAATTCAAACCA+AGG + Chr7:79435525-79435544 MsG0780040576.01.T01:three_prime_UTR 45.0%
GCGATAGCTTACCGATCAAA+AGG - Chr7:79433159-79433178 None:intergenic 45.0%
GCGGAGGAAGAAAAGAAAAG+AGG - Chr7:79431810-79431829 None:intergenic 45.0%
GCTCTTATGCAGGTGGATAA+GGG + Chr7:79434823-79434842 MsG0780040576.01.T01:intron 45.0%
GCTGGAGCTATCATTGGTAA+GGG + Chr7:79435340-79435359 MsG0780040576.01.T01:CDS 45.0%
GTGGGAAATATGCCAGACAT+TGG + Chr7:79434372-79434391 MsG0780040576.01.T01:intron 45.0%
TAAGTCCTGTCAGTACCCTA+AGG - Chr7:79435775-79435794 None:intergenic 45.0%
TGCTCTTATGCAGGTGGATA+AGG + Chr7:79434822-79434841 MsG0780040576.01.T01:intron 45.0%
TTATGCAGGTGGATAAGGGT+GGG + Chr7:79434827-79434846 MsG0780040576.01.T01:intron 45.0%
TTCAACACTGATCTTGGCAG+TGG - Chr7:79435311-79435330 None:intergenic 45.0%
! ATGCGGCTTTTAACAGCAGA+TGG - Chr7:79435079-79435098 None:intergenic 45.0%
! GACAAATGTCATTTCGCCCA+CGG + Chr7:79435139-79435158 MsG0780040576.01.T01:CDS 45.0%
! GCTTCCTACACCAGTTGATA+AGG - Chr7:79432683-79432702 None:intergenic 45.0%
!! CCTGTGTGATCCTTTGAAGT+TGG + Chr7:79434430-79434449 MsG0780040576.01.T01:intron 45.0%
!! TGAACTTGTTTGGTTCGGTC+AGG + Chr7:79433194-79433213 MsG0780040576.01.T01:intron 45.0%
AAGAGAGGAAGACCCGAACA+TGG + Chr7:79431885-79431904 MsG0780040576.01.T01:CDS 50.0%
AAGGCGGTGGCTGTGATAAA+AGG - Chr7:79431781-79431800 None:intergenic 50.0%
AAGTGGCAGCTCTCACCAAA+TGG - Chr7:79434932-79434951 None:intergenic 50.0%
AATGATAGCTCCAGCCAAGG+AGG - Chr7:79435335-79435354 None:intergenic 50.0%
ACCAAGTTCCCATTCTCCGT+GGG - Chr7:79435158-79435177 None:intergenic 50.0%
ACCAATGATAGCTCCAGCCA+AGG - Chr7:79435338-79435357 None:intergenic 50.0%
AGGTGGTGCAGACATTTGCA+GGG - Chr7:79435514-79435533 None:intergenic 50.0%
AGTGGCAGCTCTCACCAAAT+GGG - Chr7:79434931-79434950 None:intergenic 50.0%
ATACAGACTTGGGGCCTGTT+TGG - Chr7:79432555-79432574 None:intergenic 50.0%
ATCAAGCTTTCAGCCCGTAG+TGG + Chr7:79433112-79433131 MsG0780040576.01.T01:intron 50.0%
CACAATGGTCACCGTCACAT+GGG + Chr7:79435211-79435230 MsG0780040576.01.T01:CDS 50.0%
CACTTCTTGCACCATGTTCC+TGG + Chr7:79434947-79434966 MsG0780040576.01.T01:CDS 50.0%
CAGAACACTACTGCTGCTAC+GGG - Chr7:79435911-79435930 None:intergenic 50.0%
CAGGAACATGGTGCAAGAAG+TGG - Chr7:79434949-79434968 None:intergenic 50.0%
CCATCCGATGACTGCCAAAA+CGG - Chr7:79435252-79435271 None:intergenic 50.0%
CTTATGCAGGTGGATAAGGG+TGG + Chr7:79434826-79434845 MsG0780040576.01.T01:intron 50.0%
GAGTAAACCCCTAACCCTAG+CGG - Chr7:79431829-79431848 None:intergenic 50.0%
GCATTTGCACCAAAGCTAGC+TGG - Chr7:79435289-79435308 None:intergenic 50.0%
GGAGCTATCATTGGTAAGGG+TGG + Chr7:79435343-79435362 MsG0780040576.01.T01:CDS 50.0%
GGAGGCTTCAACACTGATCT+TGG - Chr7:79435317-79435336 None:intergenic 50.0%
GGATGCAAGCAACATGGTGA+AGG + Chr7:79435476-79435495 MsG0780040576.01.T01:three_prime_UTR 50.0%
GGCTGGAGCTATCATTGGTA+AGG + Chr7:79435339-79435358 MsG0780040576.01.T01:CDS 50.0%
TACCAAGTTCCCATTCTCCG+TGG - Chr7:79435159-79435178 None:intergenic 50.0%
TAGGTGGTGCAGACATTTGC+AGG - Chr7:79435515-79435534 None:intergenic 50.0%
TCACAATGGTCACCGTCACA+TGG + Chr7:79435210-79435229 MsG0780040576.01.T01:CDS 50.0%
TCATTTCGCCCACGGAGAAT+GGG + Chr7:79435147-79435166 MsG0780040576.01.T01:CDS 50.0%
TCCATGGATATGCGCAAGAG+AGG + Chr7:79431870-79431889 MsG0780040576.01.T01:exon 50.0%
TCCTCTCTTGCGCATATCCA+TGG - Chr7:79431874-79431893 None:intergenic 50.0%
TCCTTGGCTGGAGCTATCAT+TGG + Chr7:79435334-79435353 MsG0780040576.01.T01:CDS 50.0%
TGGGGGGACTTACGATATTC+TGG + Chr7:79434574-79434593 MsG0780040576.01.T01:intron 50.0%
TGTGACGGTGACCATTGTGA+CGG - Chr7:79435210-79435229 None:intergenic 50.0%
TTCTTCCTCCGCTAGGGTTA+GGG + Chr7:79431818-79431837 MsG0780040576.01.T01:five_prime_UTR 50.0%
TTCTTGCACCATGTTCCTGG+CGG + Chr7:79434950-79434969 MsG0780040576.01.T01:CDS 50.0%
TTTCTTCCTCCGCTAGGGTT+AGG + Chr7:79431817-79431836 MsG0780040576.01.T01:five_prime_UTR 50.0%
! AAGTGTCTGGGTGCTTGCTA+GGG + Chr7:79434299-79434318 MsG0780040576.01.T01:intron 50.0%
! GATCAGTGTTGAAGCCTCCT+TGG + Chr7:79435318-79435337 MsG0780040576.01.T01:CDS 50.0%
! GCGCCTTGGTTTGAATTAGG+TGG - Chr7:79435531-79435550 None:intergenic 50.0%
!! CGTTTGGGTGTTGGTGTTGT+GGG + Chr7:79434354-79434373 MsG0780040576.01.T01:intron 50.0%
!! TCGTTTGGGTGTTGGTGTTG+TGG + Chr7:79434353-79434372 MsG0780040576.01.T01:intron 50.0%
!! TTGCTCCTTAGGGTACTGAC+AGG + Chr7:79435767-79435786 MsG0780040576.01.T01:three_prime_UTR 50.0%
!!! AAAGAGGGTTTTGAAGGCGG+TGG - Chr7:79431794-79431813 None:intergenic 50.0%
AAGCTAGCTGGAACAGGAGG+AGG - Chr7:79435277-79435296 None:intergenic 55.0%
ACTGCCAAAACGGCCAGCAT+TGG - Chr7:79435242-79435261 None:intergenic 55.0%
AGCAGATGGCGCAGAACCAT+TGG - Chr7:79435065-79435084 None:intergenic 55.0%
CCAAAGCTAGCTGGAACAGG+AGG - Chr7:79435280-79435299 None:intergenic 55.0%
CGAAATGCACATGCGCCCAA+TGG + Chr7:79435046-79435065 MsG0780040576.01.T01:CDS 55.0%
CGTGGGGCTGGAACATTTCT+GGG - Chr7:79435028-79435047 None:intergenic 55.0%
CTGCCAAAACGGCCAGCATT+GGG - Chr7:79435241-79435260 None:intergenic 55.0%
GACAGTGCACCGCCTCATTA+AGG - Chr7:79435704-79435723 None:intergenic 55.0%
GACTTGGGGCCTGTTTGGAT+TGG - Chr7:79432550-79432569 None:intergenic 55.0%
GCAAGCACCCAGACACTTCT+AGG - Chr7:79434297-79434316 None:intergenic 55.0%
GCACCAAAGCTAGCTGGAAC+AGG - Chr7:79435283-79435302 None:intergenic 55.0%
GCAGATGGCGCAGAACCATT+GGG - Chr7:79435064-79435083 None:intergenic 55.0%
GTCATTTCGCCCACGGAGAA+TGG + Chr7:79435146-79435165 MsG0780040576.01.T01:CDS 55.0%
GTGCACTGTCGTGTCAGACA+GGG + Chr7:79435714-79435733 MsG0780040576.01.T01:three_prime_UTR 55.0%
TAAACCCCTAACCCTAGCGG+AGG - Chr7:79431826-79431845 None:intergenic 55.0%
TACAAAGCAAGGGCCCTGTC+TGG + Chr7:79432339-79432358 MsG0780040576.01.T01:intron 55.0%
TCGTGGGGCTGGAACATTTC+TGG - Chr7:79435029-79435048 None:intergenic 55.0%
TCTTCCTCCGCTAGGGTTAG+GGG + Chr7:79431819-79431838 MsG0780040576.01.T01:five_prime_UTR 55.0%
TGCCAAAACGGCCAGCATTG+GGG - Chr7:79435240-79435259 None:intergenic 55.0%
TGGGCGCATGTGCATTTCGT+GGG - Chr7:79435045-79435064 None:intergenic 55.0%
TGTTTCCATGATGGCCCCCA+GGG - Chr7:79435575-79435594 None:intergenic 55.0%
TTGGGCGCATGTGCATTTCG+TGG - Chr7:79435046-79435065 None:intergenic 55.0%
TTGTTTCCATGATGGCCCCC+AGG - Chr7:79435576-79435595 None:intergenic 55.0%
! AATTCAAACCAAGGCGCCCC+TGG + Chr7:79435534-79435553 MsG0780040576.01.T01:three_prime_UTR 55.0%
! AGCACTTCTGGCTGCCCATT+TGG + Chr7:79434914-79434933 MsG0780040576.01.T01:intron 55.0%
! AGTGTTGAAGCCTCCTTGGC+TGG + Chr7:79435322-79435341 MsG0780040576.01.T01:CDS 55.0%
! ATTCAAACCAAGGCGCCCCT+GGG + Chr7:79435535-79435554 MsG0780040576.01.T01:three_prime_UTR 55.0%
! CCTCCTGTTCCAGCTAGCTT+TGG + Chr7:79435277-79435296 MsG0780040576.01.T01:CDS 55.0%
! GAAGTGTCTGGGTGCTTGCT+AGG + Chr7:79434298-79434317 MsG0780040576.01.T01:intron 55.0%
! GCTGGAACATTTCTGGGTGC+AGG - Chr7:79435022-79435041 None:intergenic 55.0%
! GGAACATTTCTGGGTGCAGG+AGG - Chr7:79435019-79435038 None:intergenic 55.0%
! GGGGCGCCTTGGTTTGAATT+AGG - Chr7:79435534-79435553 None:intergenic 55.0%
!! CCGTTTTGGCAGTCATCGGA+TGG + Chr7:79435249-79435268 MsG0780040576.01.T01:CDS 55.0%
!! CTGGCCGTTTTGGCAGTCAT+CGG + Chr7:79435245-79435264 MsG0780040576.01.T01:CDS 55.0%
!! GTAGAGCGTCGTTTGGGTGT+TGG + Chr7:79434345-79434364 MsG0780040576.01.T01:intron 55.0%
CATTGGGGGGTCCCATGTGA+CGG - Chr7:79435225-79435244 None:intergenic 60.0%
GCATGTGCATTTCGTGGGGC+TGG - Chr7:79435040-79435059 None:intergenic 60.0%
GCCCACGGAGAATGGGAACT+TGG + Chr7:79435154-79435173 MsG0780040576.01.T01:CDS 60.0%
GGGCGCATGTGCATTTCGTG+GGG - Chr7:79435044-79435063 None:intergenic 60.0%
GGTGCACTGTCGTGTCAGAC+AGG + Chr7:79435713-79435732 MsG0780040576.01.T01:three_prime_UTR 60.0%
GTTTCCATGATGGCCCCCAG+GGG - Chr7:79435574-79435593 None:intergenic 60.0%
! CCAAAACGGCCAGCATTGGG+GGG - Chr7:79435238-79435257 None:intergenic 60.0%
! GCCAAAACGGCCAGCATTGG+GGG - Chr7:79435239-79435258 None:intergenic 60.0%
CACATGGGACCCCCCAATGC+TGG + Chr7:79435226-79435245 MsG0780040576.01.T01:CDS 65.0%
! CCCCCCAATGCTGGCCGTTT+TGG + Chr7:79435235-79435254 MsG0780040576.01.T01:CDS 65.0%
AGCCATCATGGCGCCCCTGG+GGG + Chr7:79435558-79435577 MsG0780040576.01.T01:three_prime_UTR 70.0%
GAGCCATCATGGCGCCCCTG+GGG + Chr7:79435557-79435576 MsG0780040576.01.T01:three_prime_UTR 70.0%
GGAGCCATCATGGCGCCCCT+GGG + Chr7:79435556-79435575 MsG0780040576.01.T01:three_prime_UTR 70.0%
GGCGCCATGATGGCTCCCAG+GGG - Chr7:79435553-79435572 None:intergenic 70.0%
GGGCGCCATGATGGCTCCCA+GGG - Chr7:79435554-79435573 None:intergenic 70.0%
!! CTGGGTGCAGGAGGTGCTGC+AGG - Chr7:79435010-79435029 None:intergenic 70.0%
GGCGCCCCTGGGAGCCATCA+TGG + Chr7:79435546-79435565 MsG0780040576.01.T01:three_prime_UTR 75.0%
GGGAGCCATCATGGCGCCCC+TGG + Chr7:79435555-79435574 MsG0780040576.01.T01:three_prime_UTR 75.0%
! GGGGCGCCATGATGGCTCCC+AGG - Chr7:79435555-79435574 None:intergenic 75.0%
!! GATGGCTCCCAGGGGCGCCT+TGG - Chr7:79435545-79435564 None:intergenic 75.0%
! GGCGCCCCTGGGGGCCATCA+TGG + Chr7:79435567-79435586 MsG0780040576.01.T01:three_prime_UTR 80.0%
!!! GGCCCCCAGGGGCGCCATGA+TGG - Chr7:79435563-79435582 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 79431738 79436016 79431738 ID=MsG0780040576.01;Name=MsG0780040576.01
Chr7 mRNA 79431738 79436016 79431738 ID=MsG0780040576.01.T01;Parent=MsG0780040576.01;Name=MsG0780040576.01.T01;_AED=0.49;_eAED=0.49;_QI=135|1|1|1|1|1|3|578|218
Chr7 exon 79431738 79431945 79431738 ID=MsG0780040576.01.T01:exon:16248;Parent=MsG0780040576.01.T01
Chr7 exon 79432671 79432731 79432671 ID=MsG0780040576.01.T01:exon:16249;Parent=MsG0780040576.01.T01
Chr7 exon 79434916 79436016 79434916 ID=MsG0780040576.01.T01:exon:16250;Parent=MsG0780040576.01.T01
Chr7 five_prime_UTR 79431738 79431872 79431738 ID=MsG0780040576.01.T01:five_prime_utr;Parent=MsG0780040576.01.T01
Chr7 CDS 79431873 79431945 79431873 ID=MsG0780040576.01.T01:cds;Parent=MsG0780040576.01.T01
Chr7 CDS 79432671 79432731 79432671 ID=MsG0780040576.01.T01:cds;Parent=MsG0780040576.01.T01
Chr7 CDS 79434916 79435438 79434916 ID=MsG0780040576.01.T01:cds;Parent=MsG0780040576.01.T01
Chr7 three_prime_UTR 79435439 79436016 79435439 ID=MsG0780040576.01.T01:three_prime_utr;Parent=MsG0780040576.01.T01
Gene Sequence

>MsG0780040576.01.T01

ATGGATATGCGCAAGAGAGGAAGACCCGAACATGGATTCAACAACAATGGCGGATTCAAGAAATCCAGACATGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGTACCAAGTTTTTCAGCACTTCTGGCTGCCCATTTGGTGAGAGCTGCCACTTCTTGCACCATGTTCCTGGCGGTTATAATGCTGTTTCCCAGATGATGAATCTAACACCTGCAGCACCTCCTGCACCCAGAAATGTTCCAGCCCCACGAAATGCACATGCGCCCAATGGTTCTGCGCCATCTGCTGTTAAAAGCCGCATATGCAGCAAGTTTAATACTGCTGAAGGCTGCAAATTTGGTGACAAATGTCATTTCGCCCACGGAGAATGGGAACTTGGTAAGCCTGTAGCTCCATCATTTGATGATCACCGTCACAATGGTCACCGTCACATGGGACCCCCCAATGCTGGCCGTTTTGGCAGTCATCGGATGGAGCCTCCTCCTGTTCCAGCTAGCTTTGGTGCAAATGCCACTGCCAAGATCAGTGTTGAAGCCTCCTTGGCTGGAGCTATCATTGGTAAGGGTGGTGTGAACTCAAAACAGATCTGTCGTCAAACTGGTGCCAAATTTCAATTCGAGATCATGAAGACCCAAATCTGA

Protein sequence

>MsG0780040576.01.T01

MDMRKRGRPEHGFNNNGGFKKSRHEMESLSTGVGSKSKPCTKFFSTSGCPFGESCHFLHHVPGGYNAVSQMMNLTPAAPPAPRNVPAPRNAHAPNGSAPSAVKSRICSKFNTAEGCKFGDKCHFAHGEWELGKPVAPSFDDHRHNGHRHMGPPNAGRFGSHRMEPPPVPASFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKFQFEIMKTQI*