AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011272.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011272.01.T01 MTR_2g101270 97.879 330 7 0 1 330 1 330 0.0 659
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011272.01.T01 AT3G16310 69.277 332 97 3 1 330 1 329 6.02e-166 465

Find 121 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTGCTGACACTTAAGATTT+TGG 0.165990 2:+81808470 MsG0280011272.01.T01:three_prime_UTR
TTCTCCAAATGATACTAATT+TGG 0.190381 2:+81807529 MsG0280011272.01.T01:CDS
GAAGAATGGGTAACAGTATA+TGG 0.215069 2:+81805344 MsG0280011272.01.T01:CDS
ATTAATGGAGTCCTAATTAT+TGG 0.241844 2:+81807948 MsG0280011272.01.T01:CDS
GGAGTCGAAAATTCTCTATT+TGG 0.255914 2:-81805071 None:intergenic
ACTTCAGGCCTTGCCACTTC+TGG 0.276867 2:-81805284 None:intergenic
AAAATTCTCTATTTGGAGTT+TGG 0.279174 2:-81805064 None:intergenic
TTTCCCCGGCGGGCATTAAC+AGG 0.283319 2:-81804861 None:intergenic
TGTTCACCACCACTCTTTGC+AGG 0.284691 2:-81805188 None:intergenic
AATGTGAAATTGAGAATTTA+AGG 0.290907 2:-81803695 None:intergenic
AAGAATGGAATACAAATTAA+TGG 0.309323 2:+81807933 MsG0280011272.01.T01:CDS
AGAAATGGGATCATAATATA+TGG 0.320571 2:+81808410 MsG0280011272.01.T01:three_prime_UTR
TTGCCATTCTGCAGATAATA+TGG 0.320989 2:-81808098 None:intergenic
AAAACCAAATTAGTATCATT+TGG 0.323538 2:-81807533 None:intergenic
AAGGAATTTCGCTGGACTTC+AGG 0.331878 2:-81805299 None:intergenic
TCCTTGATTGTTAAGCCTTT+CGG 0.335228 2:-81808009 None:intergenic
GCTTCGGACTTGCCTTTCGC+TGG 0.345748 2:-81805092 None:intergenic
AGGGTTTCACACCAATAATT+AGG 0.353677 2:-81807959 None:intergenic
TAATCCAGTATGCCTGATTC+TGG 0.358857 2:-81804999 None:intergenic
TTCTCCAGAATCAGGCATAC+TGG 0.373999 2:+81804995 MsG0280011272.01.T01:CDS
TACTTCTGGGTGCCTGGCAG+TGG 0.374416 2:-81808051 None:intergenic
TCAAACTAAGCGAGCCTTGT+TGG 0.381381 2:-81805151 None:intergenic
GCGTGAAAACTTTGGTAATT+CGG 0.395948 2:+81804926 MsG0280011272.01.T01:CDS
GGCCTTGCCACTTCTGGTGG+TGG 0.396977 2:-81805278 None:intergenic
AAGGCTCGCTTAGTTTGAAT+TGG 0.399188 2:+81805156 MsG0280011272.01.T01:CDS
ATGTGAAATTGAGAATTTAA+GGG 0.400029 2:-81803694 None:intergenic
TGTGCTTACTTCTGGGTGCC+TGG 0.400037 2:-81808057 None:intergenic
CCTGGCAGTGGGTAGAGGTA+AGG 0.403276 2:-81808039 None:intergenic
AGCACATCTTATGCTTTAAG+AGG 0.412178 2:+81805116 MsG0280011272.01.T01:CDS
ATTGTTCATTTGATTTGAGC+TGG 0.412737 2:+81808290 MsG0280011272.01.T01:three_prime_UTR
GAAATCTTAATGAGGAAGAA+TGG 0.412872 2:+81805330 MsG0280011272.01.T01:CDS
GCACATCAAAAGCTCCTTCT+CGG 0.416892 2:+81808075 MsG0280011272.01.T01:CDS
CAGGAGCATCTTCTTCTCTA+TGG 0.417616 2:+81804904 MsG0280011272.01.T01:CDS
GGGTGCCTGGCAGTGGGTAG+AGG 0.423344 2:-81808044 None:intergenic
CTGGCCCTAGAGATGCTAAC+TGG 0.425172 2:+81807597 MsG0280011272.01.T01:CDS
GCAGTCTAGATGATCTGTTT+TGG 0.425257 2:+81808200 MsG0280011272.01.T01:exon
TGCTCCTGACTGGCTTGGAC+TGG 0.428965 2:-81804889 None:intergenic
ACCGAAAGGCTTAACAATCA+AGG 0.430735 2:+81808008 MsG0280011272.01.T01:CDS
ACTTAGTCTCAGGAGACATT+TGG 0.432323 2:-81805022 None:intergenic
AGCATAAGATGTGCTGGCTT+CGG 0.432389 2:-81805108 None:intergenic
TCTCTATGGCGTGAAAACTT+TGG 0.434782 2:+81804918 MsG0280011272.01.T01:CDS
TTCTCTATTTGGAGTTTGGA+TGG 0.437107 2:-81805060 None:intergenic
CTTGCCACTTCTGGTGGTGG+AGG 0.448887 2:-81805275 None:intergenic
GGTCAAAGCTTGACGTTGCA+TGG 0.453671 2:-81807988 None:intergenic
GCTCGCTTAGTTTGAATTGG+TGG 0.454126 2:+81805159 MsG0280011272.01.T01:CDS
CAAAATGCTCTCAACAAGAA+TGG 0.460346 2:+81807918 MsG0280011272.01.T01:CDS
TAACACTGCAATCTTATGAA+TGG 0.460377 2:+81808355 MsG0280011272.01.T01:three_prime_UTR
GTCGAGGGTGTGGTTCAGCC+TGG 0.461947 2:+81805236 MsG0280011272.01.T01:CDS
GGCTGAACCACACCCTCGAC+TGG 0.463862 2:-81805233 None:intergenic
TTATTGTCTGACTTAGTCTC+AGG 0.468844 2:-81805032 None:intergenic
GGATCATAATATATGGATAC+AGG 0.469862 2:+81808417 MsG0280011272.01.T01:three_prime_UTR
GTCCATGATCTTGGATGCTA+AGG 0.469908 2:-81808168 None:intergenic
ATCCTTAGCATCCAAGATCA+TGG 0.475742 2:+81808166 MsG0280011272.01.T01:CDS
ATTAAGATTTCCTGCAGGTA+AGG 0.475811 2:-81805318 None:intergenic
GTGAACAAGAGGAGAAAGGA+AGG 0.476290 2:+81805204 MsG0280011272.01.T01:CDS
AATTATTGGTGTGAAACCCT+TGG 0.478180 2:+81807962 MsG0280011272.01.T01:CDS
ATCCCCTGTTAATGCCCGCC+GGG 0.480958 2:+81804857 MsG0280011272.01.T01:CDS
AAATCTTAATGAGGAAGAAT+GGG 0.484177 2:+81805331 MsG0280011272.01.T01:CDS
AAACATCAAGTCCATGATCT+TGG 0.488113 2:-81808177 None:intergenic
GAAGATGCTCCTGACTGGCT+TGG 0.495482 2:-81804894 None:intergenic
GGTGGTGAACAAGAGGAGAA+AGG 0.505138 2:+81805200 MsG0280011272.01.T01:CDS
TCAGGCCTTGCCACTTCTGG+TGG 0.505586 2:-81805281 None:intergenic
ACTTCTGGGTGCCTGGCAGT+GGG 0.506491 2:-81808050 None:intergenic
CAGTTAGCATCTCTAGGGCC+AGG 0.509660 2:-81807596 None:intergenic
GCGCAAAGAACTCCTAGGTC+TGG 0.511122 2:+81804804 MsG0280011272.01.T01:CDS
AAGAATGGGTAACAGTATAT+GGG 0.512808 2:+81805345 MsG0280011272.01.T01:CDS
AATATTGCTTATAATAAAGC+AGG 0.517140 2:-81808241 None:intergenic
TTGACGTTGCATGGGATCCA+AGG 0.518509 2:-81807979 None:intergenic
TCTTAAAGCATAAGATGTGC+TGG 0.519255 2:-81805114 None:intergenic
CTGCAGGTAAGGAATTTCGC+TGG 0.519335 2:-81805307 None:intergenic
CATCCCCTGTTAATGCCCGC+CGG 0.522742 2:+81804856 MsG0280011272.01.T01:CDS
AATGCAACTGCAAGGCAGAC+TGG 0.522955 2:+81808119 MsG0280011272.01.T01:CDS
GTCAAAGCTTGACGTTGCAT+GGG 0.523353 2:-81807987 None:intergenic
GAGAAGAAGATGCTCCTGAC+TGG 0.526749 2:-81804899 None:intergenic
CCTTACCTCTACCCACTGCC+AGG 0.527907 2:+81808039 MsG0280011272.01.T01:CDS
TCTCTATTTGGAGTTTGGAT+GGG 0.529308 2:-81805059 None:intergenic
GAAGTACCTGGTAGTGGTGG+TGG 0.530353 2:-81803747 None:intergenic
TCCTCATTAAGATTTCCTGC+AGG 0.533575 2:-81805323 None:intergenic
CAGCGAAATTCCTTACCTGC+AGG 0.534512 2:+81805308 MsG0280011272.01.T01:CDS
AACGTCAAGCTTTGACCGAA+AGG 0.536916 2:+81807994 MsG0280011272.01.T01:CDS
GGGTTCTCCAGTCGAGGGTG+TGG 0.537698 2:+81805226 MsG0280011272.01.T01:CDS
CCACAGCGCAAAGAACTCCT+AGG 0.538182 2:+81804799 MsG0280011272.01.T01:CDS
TGCAGATAATATGGCCGAGA+AGG 0.543834 2:-81808089 None:intergenic
ACTGGAAAACTTTCCCCGGC+GGG 0.548506 2:-81804871 None:intergenic
GAGAGAGAAGTACCTGGTAG+TGG 0.550034 2:-81803753 None:intergenic
GCACATCTTATGCTTTAAGA+GGG 0.552808 2:+81805117 MsG0280011272.01.T01:CDS
CGGCCATATTATCTGCAGAA+TGG 0.555153 2:+81808095 MsG0280011272.01.T01:CDS
TCTTCCTCCACCACCAGAAG+TGG 0.556002 2:+81805271 MsG0280011272.01.T01:CDS
CTGGCAGTGGGTAGAGGTAA+GGG 0.559275 2:-81808038 None:intergenic
TTGGACTGGAAAACTTTCCC+CGG 0.559593 2:-81804875 None:intergenic
TGCATCCAGTTAGCATCTCT+AGG 0.560762 2:-81807602 None:intergenic
TTCCCCGGCGGGCATTAACA+GGG 0.567742 2:-81804860 None:intergenic
TGACGTTGCATGGGATCCAA+GGG 0.567770 2:-81807978 None:intergenic
AAAGTCTGATCTATCTTCCA+AGG 0.574341 2:-81804973 None:intergenic
AGGAAGGGGTTCTCCAGTCG+AGG 0.579447 2:+81805220 MsG0280011272.01.T01:CDS
AATTCGCCACCACCACTACC+AGG 0.581143 2:+81803741 MsG0280011272.01.T01:five_prime_UTR
ACCTGCAGGAAATCTTAATG+AGG 0.582251 2:+81805322 MsG0280011272.01.T01:CDS
TCCCCGGCGGGCATTAACAG+GGG 0.586228 2:-81804859 None:intergenic
GAACAAGAGGAGAAAGGAAG+GGG 0.588864 2:+81805206 MsG0280011272.01.T01:CDS
CTCCACCACCAGAAGTGGCA+AGG 0.589454 2:+81805276 MsG0280011272.01.T01:CDS
TGAACAAGAGGAGAAAGGAA+GGG 0.599791 2:+81805205 MsG0280011272.01.T01:CDS
GCATCCAGTTAGCATCTCTA+GGG 0.606367 2:-81807601 None:intergenic
AAAGAGTGGTGGTGAACAAG+AGG 0.606401 2:+81805193 MsG0280011272.01.T01:CDS
CCTAGGAGTTCTTTGCGCTG+TGG 0.609099 2:-81804799 None:intergenic
GAATGGCTATGATCAGTACT+TGG 0.613442 2:+81808372 MsG0280011272.01.T01:three_prime_UTR
GGAAGAGTAATCAATGCACC+AGG 0.629675 2:-81805254 None:intergenic
GTGGTGGCGAATTGAAGTGA+AGG 0.630469 2:-81803731 None:intergenic
GACTGGAAAACTTTCCCCGG+CGG 0.634463 2:-81804872 None:intergenic
AGAGAAGTACCTGGTAGTGG+TGG 0.635221 2:-81803750 None:intergenic
CACATCTTATGCTTTAAGAG+GGG 0.638647 2:+81805118 MsG0280011272.01.T01:CDS
AGTGACTGTCTACCAGACCT+AGG 0.639843 2:-81804816 None:intergenic
AGAATGGCAATGCAACTGCA+AGG 0.651500 2:+81808111 MsG0280011272.01.T01:CDS
TCCCCTGTTAATGCCCGCCG+GGG 0.661914 2:+81804858 MsG0280011272.01.T01:CDS
GGAAGGGGTTCTCCAGTCGA+GGG 0.662892 2:+81805221 MsG0280011272.01.T01:CDS
TTTCAGTGAGAAGAGAACGT+TGG 0.668921 2:-81803617 None:intergenic
GGGGTGCAGCAAAACCAACA+AGG 0.670858 2:+81805137 MsG0280011272.01.T01:CDS
TGGTCGTCACCTGCAAAGAG+TGG 0.678630 2:+81805179 MsG0280011272.01.T01:CDS
TGGCTATGATCAGTACTTGG+TGG 0.682691 2:+81808375 MsG0280011272.01.T01:three_prime_UTR
TCGTCACCTGCAAAGAGTGG+TGG 0.691867 2:+81805182 MsG0280011272.01.T01:CDS
TGGTGGCGAATTGAAGTGAA+GGG 0.710442 2:-81803730 None:intergenic
GCAACTGCAAGGCAGACTGG+AGG 0.718127 2:+81808122 MsG0280011272.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTATACATTAAAAATAAA+AGG - Chr2:81807150-81807169 None:intergenic 10.0%
!!! AATTAGTAATTTAATTTCAT+AGG + Chr2:81804016-81804035 MsG0280011272.01.T01:intron 10.0%
!!! AATTTTAAAAGAAAAAACAT+TGG - Chr2:81807777-81807796 None:intergenic 10.0%
!!! TTTGTTTAAATAAACTTTTT+GGG + Chr2:81806912-81806931 MsG0280011272.01.T01:intron 10.0%
!!! TTTTGTTTAAATAAACTTTT+TGG + Chr2:81806911-81806930 MsG0280011272.01.T01:intron 10.0%
!! AGAATTAAATCAAAACAAAA+TGG - Chr2:81805763-81805782 None:intergenic 15.0%
!! ATATTATTATCATCTTGAAT+GGG + Chr2:81806978-81806997 MsG0280011272.01.T01:intron 15.0%
!! TATATTATTATCATCTTGAA+TGG + Chr2:81806977-81806996 MsG0280011272.01.T01:intron 15.0%
!!! AACTTCTTTTTTTTATTTAG+TGG - Chr2:81805549-81805568 None:intergenic 15.0%
!!! AATTTTTCTTTATAAAGCAA+TGG + Chr2:81807674-81807693 MsG0280011272.01.T01:intron 15.0%
!!! ATTAAACATTTTAATCGTAA+GGG + Chr2:81806620-81806639 MsG0280011272.01.T01:intron 15.0%
!!! TTTTCAATTTTAGTGATTTT+AGG + Chr2:81804081-81804100 MsG0280011272.01.T01:intron 15.0%
!!! TTTTCAGTTTGTTTATTTTT+AGG + Chr2:81806335-81806354 MsG0280011272.01.T01:intron 15.0%
!! AAAACCAAATTAGTATCATT+TGG - Chr2:81807536-81807555 None:intergenic 20.0%
!! AAGAATGGAATACAAATTAA+TGG + Chr2:81807933-81807952 MsG0280011272.01.T01:CDS 20.0%
!! AATATTGCTTATAATAAAGC+AGG - Chr2:81808244-81808263 None:intergenic 20.0%
!! AATGTGAAATTGAGAATTTA+AGG - Chr2:81803698-81803717 None:intergenic 20.0%
!! ACATTGGAAATATTGATAAA+AGG - Chr2:81807761-81807780 None:intergenic 20.0%
!! ACGATTAAAATGTTTAATGT+TGG - Chr2:81806618-81806637 None:intergenic 20.0%
!! ATGTGAAATTGAGAATTTAA+GGG - Chr2:81803697-81803716 None:intergenic 20.0%
!! ATTGTTAATCCCTTATTATT+CGG - Chr2:81806740-81806759 None:intergenic 20.0%
!! TAATCATATATACTCTTGAA+TGG - Chr2:81807459-81807478 None:intergenic 20.0%
!! TCAAGAATAATTGTCTAAAA+GGG + Chr2:81805935-81805954 MsG0280011272.01.T01:intron 20.0%
!!! AAAAATCTAAACCATTTTAG+CGG - Chr2:81806884-81806903 None:intergenic 20.0%
!!! AACTTGAAACTTTTAAACAT+AGG - Chr2:81806412-81806431 None:intergenic 20.0%
!!! AATTTGTATTTTGTAGGAAA+AGG - Chr2:81807039-81807058 None:intergenic 20.0%
!!! ATGATACTAATTTGGTTTTA+AGG + Chr2:81807537-81807556 MsG0280011272.01.T01:CDS 20.0%
!!! CATTAAACATTTTAATCGTA+AGG + Chr2:81806619-81806638 MsG0280011272.01.T01:intron 20.0%
!!! CCACTTTAAAACTATTTATA+AGG + Chr2:81805433-81805452 MsG0280011272.01.T01:intron 20.0%
!!! CCTTATAAATAGTTTTAAAG+TGG - Chr2:81805436-81805455 None:intergenic 20.0%
!!! GATTTGTCAATTTTATAGAA+TGG + Chr2:81806789-81806808 MsG0280011272.01.T01:intron 20.0%
!!! GTTTTTATACATTTGTTTCT+TGG + Chr2:81804719-81804738 MsG0280011272.01.T01:intron 20.0%
!!! TATGTTTAAAAGTTTCAAGT+TGG + Chr2:81806411-81806430 MsG0280011272.01.T01:intron 20.0%
!!! TCAACTTTTTTTAGTGAATT+TGG + Chr2:81804697-81804716 MsG0280011272.01.T01:intron 20.0%
!!! TGATACTAATTTGGTTTTAA+GGG + Chr2:81807538-81807557 MsG0280011272.01.T01:CDS 20.0%
! AAAACTACAAGTTATTCCAT+GGG - Chr2:81804065-81804084 None:intergenic 25.0%
! AAATACCGCTTTATATTTGT+TGG + Chr2:81807265-81807284 MsG0280011272.01.T01:intron 25.0%
! AAATCTTAATGAGGAAGAAT+GGG + Chr2:81805331-81805350 MsG0280011272.01.T01:CDS 25.0%
! AATACACATAGATTGTTAGT+TGG - Chr2:81807113-81807132 None:intergenic 25.0%
! AGAAATGGGATCATAATATA+TGG + Chr2:81808410-81808429 MsG0280011272.01.T01:three_prime_UTR 25.0%
! AGAGCATAAAGAAACATAAA+TGG - Chr2:81806275-81806294 None:intergenic 25.0%
! AGTGATAATTCTCAAAACTT+TGG - Chr2:81805851-81805870 None:intergenic 25.0%
! ATAAGGTTAAATTGCATGTT+TGG - Chr2:81806679-81806698 None:intergenic 25.0%
! ATACACATAGATTGTTAGTT+GGG - Chr2:81807112-81807131 None:intergenic 25.0%
! ATGTAATAGGTATATAGGTT+GGG + Chr2:81805980-81805999 MsG0280011272.01.T01:intron 25.0%
! ATTAATGGAGTCCTAATTAT+TGG + Chr2:81807948-81807967 MsG0280011272.01.T01:CDS 25.0%
! ATTGTAATGTTAGTAACGTT+CGG - Chr2:81806439-81806458 None:intergenic 25.0%
! ATTTATGTTTCTTTATGCTC+TGG + Chr2:81806274-81806293 MsG0280011272.01.T01:intron 25.0%
! ATTTCTATCCATGATGTAAT+AGG + Chr2:81806012-81806031 MsG0280011272.01.T01:intron 25.0%
! CAAAATTATCTCCATGTTAA+GGG + Chr2:81804334-81804353 MsG0280011272.01.T01:intron 25.0%
! CTCAAGAATAATTGTCTAAA+AGG + Chr2:81805934-81805953 MsG0280011272.01.T01:intron 25.0%
! CTGATATATTAAGAATTGAG+AGG + Chr2:81805869-81805888 MsG0280011272.01.T01:intron 25.0%
! GAAACCTAAAATAAACGTAA+GGG - Chr2:81806379-81806398 None:intergenic 25.0%
! GTAAAATGTACCATATTTCT+AGG - Chr2:81805465-81805484 None:intergenic 25.0%
! TCTACTTTAGCATTTACATT+TGG + Chr2:81805380-81805399 MsG0280011272.01.T01:intron 25.0%
! TCTGAATTTCCGAATAATAA+GGG + Chr2:81806728-81806747 MsG0280011272.01.T01:intron 25.0%
! TGAAACCTAAAATAAACGTA+AGG - Chr2:81806380-81806399 None:intergenic 25.0%
! TTCTCCAAATGATACTAATT+TGG + Chr2:81807529-81807548 MsG0280011272.01.T01:CDS 25.0%
! TTCTGAATTTCCGAATAATA+AGG + Chr2:81806727-81806746 MsG0280011272.01.T01:intron 25.0%
! TTTATGTTTCTTTATGCTCT+GGG + Chr2:81806275-81806294 MsG0280011272.01.T01:intron 25.0%
!! AAAATTCTCTATTTGGAGTT+TGG - Chr2:81805067-81805086 None:intergenic 25.0%
!! AATAATCAAGAGCATAATGA+GGG + Chr2:81806153-81806172 MsG0280011272.01.T01:intron 25.0%
!! ACAATCGCTTATTGATTATA+CGG + Chr2:81804498-81804517 MsG0280011272.01.T01:intron 25.0%
!! TATACATTTGTTTCTTGGTT+TGG + Chr2:81804724-81804743 MsG0280011272.01.T01:intron 25.0%
!! TTTAGGTTTAATTGCATGAT+TGG + Chr2:81806352-81806371 MsG0280011272.01.T01:intron 25.0%
!!! ACTCTTTTGATTGAATCTTA+TGG + Chr2:81808320-81808339 MsG0280011272.01.T01:three_prime_UTR 25.0%
!!! ATTTTTAGAAGCATGTACAT+TGG - Chr2:81807491-81807510 None:intergenic 25.0%
!!! ATTTTTTTCCCCTTTGATTT+GGG + Chr2:81803966-81803985 MsG0280011272.01.T01:intron 25.0%
!!! GTTTATTTTAGGTTTCAAGT+TGG + Chr2:81806383-81806402 MsG0280011272.01.T01:intron 25.0%
!!! TATGAATAAGCTATTTCTAC+AGG - Chr2:81804551-81804570 None:intergenic 25.0%
!!! TATTTTTTTCCCCTTTGATT+TGG + Chr2:81803965-81803984 MsG0280011272.01.T01:intron 25.0%
!!! TCCTTTGTTTGTTTTTTTGA+TGG + Chr2:81803887-81803906 MsG0280011272.01.T01:intron 25.0%
AAAAACGAAGAGGAGAATTA+GGG + Chr2:81803643-81803662 MsG0280011272.01.T01:five_prime_UTR 30.0%
AAACCTAAAGTAAACGTTAG+GGG + Chr2:81806652-81806671 MsG0280011272.01.T01:intron 30.0%
AAGAATGGGTAACAGTATAT+GGG + Chr2:81805345-81805364 MsG0280011272.01.T01:CDS 30.0%
AAGGATTTGTCCTAGAAATA+TGG + Chr2:81805452-81805471 MsG0280011272.01.T01:intron 30.0%
AATCATAGTATTCAAGCAAG+AGG - Chr2:81807653-81807672 None:intergenic 30.0%
AATGGAAAATAACACCCATT+AGG - Chr2:81806257-81806276 None:intergenic 30.0%
ACACTACTATCATTCCTTAT+CGG - Chr2:81805410-81805429 None:intergenic 30.0%
ACATAGAGCTAAAATCACAA+AGG - Chr2:81804637-81804656 None:intergenic 30.0%
ACCTTCCAACAAATATAAAG+CGG - Chr2:81807273-81807292 None:intergenic 30.0%
ACTGAAATTGAAAAACGAAG+AGG + Chr2:81803633-81803652 MsG0280011272.01.T01:five_prime_UTR 30.0%
AGAATAATTGTCTAAAAGGG+TGG + Chr2:81805938-81805957 MsG0280011272.01.T01:intron 30.0%
AGAGTTAACTCAAAATTCGA+CGG + Chr2:81806554-81806573 MsG0280011272.01.T01:intron 30.0%
ATAGATAATTGATTGTGCTG+AGG + Chr2:81807403-81807422 MsG0280011272.01.T01:intron 30.0%
ATCTATGTGTATTGTTTCCA+AGG + Chr2:81807120-81807139 MsG0280011272.01.T01:intron 30.0%
ATTAGGACATTATCTTAGAG+GGG - Chr2:81806240-81806259 None:intergenic 30.0%
ATTTCCATCCATGATGTAAT+AGG + Chr2:81805967-81805986 MsG0280011272.01.T01:intron 30.0%
CATTAGGACATTATCTTAGA+GGG - Chr2:81806241-81806260 None:intergenic 30.0%
CCATGATGTAATAGGTATAT+AGG + Chr2:81805975-81805994 MsG0280011272.01.T01:intron 30.0%
CCTATATACCTATTACATCA+TGG - Chr2:81805978-81805997 None:intergenic 30.0%
GAAAACTACAAGTTATTCCA+TGG - Chr2:81804066-81804085 None:intergenic 30.0%
GAAACCTAAAGTAAACGTTA+GGG + Chr2:81806651-81806670 MsG0280011272.01.T01:intron 30.0%
GAAATCTTAATGAGGAAGAA+TGG + Chr2:81805330-81805349 MsG0280011272.01.T01:CDS 30.0%
GAGGTAATCAGTTAGAATAT+TGG + Chr2:81805888-81805907 MsG0280011272.01.T01:intron 30.0%
GATGTAATAGGTATATAGGT+TGG + Chr2:81805979-81805998 MsG0280011272.01.T01:intron 30.0%
GCAAAATTATCTCCATGTTA+AGG + Chr2:81804333-81804352 MsG0280011272.01.T01:intron 30.0%
GCACTACTAAATACATTTCT+TGG + Chr2:81807872-81807891 MsG0280011272.01.T01:intron 30.0%
GCCATCAAAAAAACAAACAA+AGG - Chr2:81803891-81803910 None:intergenic 30.0%
GCTCTTGAATATCTTTGATT+AGG + Chr2:81807192-81807211 MsG0280011272.01.T01:intron 30.0%
GCTGAAAAATCCTTACAAAA+CGG + Chr2:81803845-81803864 MsG0280011272.01.T01:intron 30.0%
GGATCATAATATATGGATAC+AGG + Chr2:81808417-81808436 MsG0280011272.01.T01:three_prime_UTR 30.0%
GTAGCTGCAAAAAGTTTAAT+AGG - Chr2:81807218-81807237 None:intergenic 30.0%
GTTAGAATATTGGCAAAGTT+TGG + Chr2:81805898-81805917 MsG0280011272.01.T01:intron 30.0%
TAAAAATAAAAGGTTGCCCT+TGG - Chr2:81807140-81807159 None:intergenic 30.0%
TAACACTGCAATCTTATGAA+TGG + Chr2:81808355-81808374 MsG0280011272.01.T01:three_prime_UTR 30.0%
TAAGGGATTAACAATACCTA+TGG + Chr2:81806745-81806764 MsG0280011272.01.T01:intron 30.0%
TAGATAATTGATTGTGCTGA+GGG + Chr2:81807404-81807423 MsG0280011272.01.T01:intron 30.0%
TATACCTATTACATCATGGA+TGG - Chr2:81805974-81805993 None:intergenic 30.0%
TCAAATAAGTCGATCCAAAA+AGG - Chr2:81804360-81804379 None:intergenic 30.0%
TCATACACAATCACATATGT+TGG + Chr2:81805705-81805724 MsG0280011272.01.T01:intron 30.0%
TCTATGTGTATTGTTTCCAA+GGG + Chr2:81807121-81807140 MsG0280011272.01.T01:intron 30.0%
TGAAACCTAAAGTAAACGTT+AGG + Chr2:81806650-81806669 MsG0280011272.01.T01:intron 30.0%
TTGTAATGTTAGTAACGTTC+GGG - Chr2:81806438-81806457 None:intergenic 30.0%
TTTGATCGAGAATATGAAGT+AGG + Chr2:81803989-81804008 MsG0280011272.01.T01:intron 30.0%
! AAAACATTTGATTTCAGCAG+AGG + Chr2:81805808-81805827 MsG0280011272.01.T01:intron 30.0%
! AAAATCACAAAGGCTCTTTT+AGG - Chr2:81804627-81804646 None:intergenic 30.0%
! AATCATTTTGTATCCGTTGA+TGG - Chr2:81807065-81807084 None:intergenic 30.0%
! ATCATTTTGTATCCGTTGAT+GGG - Chr2:81807064-81807083 None:intergenic 30.0%
! CAGTGTACTTGCTAAAAATA+AGG - Chr2:81806696-81806715 None:intergenic 30.0%
! CGAGTTTTTGTGTATTCAAA+CGG - Chr2:81803797-81803816 None:intergenic 30.0%
! GAATAATCAAGAGCATAATG+AGG + Chr2:81806152-81806171 MsG0280011272.01.T01:intron 30.0%
! GTATAATCTTGTGAAGCTTT+TGG + Chr2:81807162-81807181 MsG0280011272.01.T01:intron 30.0%
! GTTTACTTTAGGTTTCAAAC+TGG - Chr2:81806647-81806666 None:intergenic 30.0%
! TATTCACCACTTCTCTAAAA+AGG - Chr2:81807300-81807319 None:intergenic 30.0%
! TGTCAATTTTATAGAATGGC+TGG + Chr2:81806793-81806812 MsG0280011272.01.T01:intron 30.0%
! TTACATTTGGTTTACCGATA+AGG + Chr2:81805393-81805412 MsG0280011272.01.T01:intron 30.0%
!! ATTGTTCATTTGATTTGAGC+TGG + Chr2:81808290-81808309 MsG0280011272.01.T01:three_prime_UTR 30.0%
!! CAATATTTTACTCTCTGAAG+AGG + Chr2:81808257-81808276 MsG0280011272.01.T01:three_prime_UTR 30.0%
!! CTCTAAGATAATGTCCTAAT+GGG + Chr2:81806240-81806259 MsG0280011272.01.T01:intron 30.0%
!! TAGACAAAACAAGAAGTACT+CGG + Chr2:81806188-81806207 MsG0280011272.01.T01:intron 30.0%
!! TTTTGTTTAAAACGTCCACA+TGG + Chr2:81806481-81806500 MsG0280011272.01.T01:intron 30.0%
!!! GAAATTTTGAAACATGTTCC+TGG + Chr2:81807578-81807597 MsG0280011272.01.T01:CDS 30.0%
!!! TAGACAGTCACTATTTTTTC+AGG + Chr2:81804827-81804846 MsG0280011272.01.T01:CDS 30.0%
AAAACCACTTCAGAGTAACA+AGG - Chr2:81807814-81807833 None:intergenic 35.0%
AAACATCAAGTCCATGATCT+TGG - Chr2:81808180-81808199 None:intergenic 35.0%
AAAGGAAAAGACCCGTTAAT+CGG - Chr2:81803873-81803892 None:intergenic 35.0%
AAAGTCTGATCTATCTTCCA+AGG - Chr2:81804976-81804995 None:intergenic 35.0%
AATAAGTTGTGTTGTGCTAC+AGG - Chr2:81805603-81805622 None:intergenic 35.0%
AATACAAATTGCCCCATCAA+CGG + Chr2:81807049-81807068 MsG0280011272.01.T01:intron 35.0%
AATGGTTTATTGAATCGGTG+AGG - Chr2:81807433-81807452 None:intergenic 35.0%
AATTATTGGTGTGAAACCCT+TGG + Chr2:81807962-81807981 MsG0280011272.01.T01:CDS 35.0%
ACAATACCTATGGCTATGTA+TGG + Chr2:81806755-81806774 MsG0280011272.01.T01:intron 35.0%
ACAATGTCAAAATAGCTGGA+TGG - Chr2:81807729-81807748 None:intergenic 35.0%
AGAATATTGGCAAAGTTTGG+TGG + Chr2:81805901-81805920 MsG0280011272.01.T01:intron 35.0%
AGGGTTTCACACCAATAATT+AGG - Chr2:81807962-81807981 None:intergenic 35.0%
ATGCTGACATCAGTAACATA+AGG + Chr2:81806590-81806609 MsG0280011272.01.T01:intron 35.0%
ATGTTATAGTATTCAGCCCA+TGG + Chr2:81804046-81804065 MsG0280011272.01.T01:intron 35.0%
ATTAAGATTTCCTGCAGGTA+AGG - Chr2:81805321-81805340 None:intergenic 35.0%
ATTGTCTAAAAGGGTGGTAA+TGG + Chr2:81805944-81805963 MsG0280011272.01.T01:intron 35.0%
CAAAATGCTCTCAACAAGAA+TGG + Chr2:81807918-81807937 MsG0280011272.01.T01:CDS 35.0%
CCATTAGGACATTATCTTAG+AGG - Chr2:81806242-81806261 None:intergenic 35.0%
CTATCTTCCAAGGTGAAAAA+AGG - Chr2:81804966-81804985 None:intergenic 35.0%
GAAAAACGAAGAGGAGAATT+AGG + Chr2:81803642-81803661 MsG0280011272.01.T01:five_prime_UTR 35.0%
GAAGAATGGGTAACAGTATA+TGG + Chr2:81805344-81805363 MsG0280011272.01.T01:CDS 35.0%
GACAACAATGTCAAAATAGC+TGG - Chr2:81807733-81807752 None:intergenic 35.0%
GCAAAAATCATAGCTAGTTC+CGG + Chr2:81806848-81806867 MsG0280011272.01.T01:intron 35.0%
GGAGTCGAAAATTCTCTATT+TGG - Chr2:81805074-81805093 None:intergenic 35.0%
GGCCAAATGGTTTATTGAAT+CGG - Chr2:81807438-81807457 None:intergenic 35.0%
GTTAGTTGGGCAAGAAAAAT+GGG - Chr2:81807099-81807118 None:intergenic 35.0%
TAACTCAAAATTCGACGGAA+AGG + Chr2:81806559-81806578 MsG0280011272.01.T01:intron 35.0%
TAACTTCCTCTCTGCAAAAA+AGG - Chr2:81806216-81806235 None:intergenic 35.0%
TACAAAACGGAACCGATTAA+CGG + Chr2:81803858-81803877 MsG0280011272.01.T01:intron 35.0%
TAGTGCATAGCCTAATATCA+GGG - Chr2:81807858-81807877 None:intergenic 35.0%
TATACTCTTGAATGGCCAAA+TGG - Chr2:81807451-81807470 None:intergenic 35.0%
TCATAGTCGTCTTTACAATC+TGG - Chr2:81805626-81805645 None:intergenic 35.0%
TCCTTGATTGTTAAGCCTTT+CGG - Chr2:81808012-81808031 None:intergenic 35.0%
TCGATCAAACCCAAATCAAA+GGG - Chr2:81803978-81803997 None:intergenic 35.0%
TCTTAAAGCATAAGATGTGC+TGG - Chr2:81805117-81805136 None:intergenic 35.0%
TGCTGACATCAGTAACATAA+GGG + Chr2:81806591-81806610 MsG0280011272.01.T01:intron 35.0%
TGTTAGTTGGGCAAGAAAAA+TGG - Chr2:81807100-81807119 None:intergenic 35.0%
TTATTGTCTGACTTAGTCTC+AGG - Chr2:81805035-81805054 None:intergenic 35.0%
TTGCCATTCTGCAGATAATA+TGG - Chr2:81808101-81808120 None:intergenic 35.0%
TTGTTAACCACCCTGATATT+AGG + Chr2:81807845-81807864 MsG0280011272.01.T01:intron 35.0%
! ACCGCTTTATATTTGTTGGA+AGG + Chr2:81807269-81807288 MsG0280011272.01.T01:intron 35.0%
! AGCACATCTTATGCTTTAAG+AGG + Chr2:81805116-81805135 MsG0280011272.01.T01:CDS 35.0%
! CTGAAAATAGCTTGTGAACA+TGG - Chr2:81804192-81804211 None:intergenic 35.0%
! CTTTTGATGTGCTTACTTCT+GGG - Chr2:81808067-81808086 None:intergenic 35.0%
! GCGTGAAAACTTTGGTAATT+CGG + Chr2:81804926-81804945 MsG0280011272.01.T01:CDS 35.0%
! GCTAAAATCATATTTGCTGC+AGG + Chr2:81806079-81806098 MsG0280011272.01.T01:intron 35.0%
! TAATAGGTATATAGGTTGGG+TGG + Chr2:81805983-81806002 MsG0280011272.01.T01:intron 35.0%
! TCATTTTGTATCCGTTGATG+GGG - Chr2:81807063-81807082 None:intergenic 35.0%
! TCTCTATTTGGAGTTTGGAT+GGG - Chr2:81805062-81805081 None:intergenic 35.0%
! TGGATGCTAAGGATTTTGTT+GGG - Chr2:81808160-81808179 None:intergenic 35.0%
! TGGGGCAATTTGTATTTTGT+AGG - Chr2:81807045-81807064 None:intergenic 35.0%
! TTCTCTATTTGGAGTTTGGA+TGG - Chr2:81805063-81805082 None:intergenic 35.0%
! TTGGATGCTAAGGATTTTGT+TGG - Chr2:81808161-81808180 None:intergenic 35.0%
!! AGACAAAACAAGAAGTACTC+GGG + Chr2:81806189-81806208 MsG0280011272.01.T01:intron 35.0%
!! CACATCTTATGCTTTAAGAG+GGG + Chr2:81805118-81805137 MsG0280011272.01.T01:CDS 35.0%
!! CACCGATTCAATAAACCATT+TGG + Chr2:81807433-81807452 MsG0280011272.01.T01:intron 35.0%
!! CCTCTAAGATAATGTCCTAA+TGG + Chr2:81806239-81806258 MsG0280011272.01.T01:intron 35.0%
!! GCACATCTTATGCTTTAAGA+GGG + Chr2:81805117-81805136 MsG0280011272.01.T01:CDS 35.0%
!! TGGTCCCTTACGTTTATTTT+AGG + Chr2:81806372-81806391 MsG0280011272.01.T01:intron 35.0%
!! TGTGCTGACACTTAAGATTT+TGG + Chr2:81808470-81808489 MsG0280011272.01.T01:three_prime_UTR 35.0%
!! TTAATCGGTTCCGTTTTGTA+AGG - Chr2:81803858-81803877 None:intergenic 35.0%
!! TTTTACTCTCTGAAGAGGTT+CGG + Chr2:81808262-81808281 MsG0280011272.01.T01:three_prime_UTR 35.0%
!!! GAGAATTAGGGTTTTGAATC+GGG + Chr2:81803655-81803674 MsG0280011272.01.T01:five_prime_UTR 35.0%
!!! GGAGAATTAGGGTTTTGAAT+CGG + Chr2:81803654-81803673 MsG0280011272.01.T01:five_prime_UTR 35.0%
!!! GGTCACATGTTTTGAGAAAT+GGG + Chr2:81808396-81808415 MsG0280011272.01.T01:three_prime_UTR 35.0%
!!! TGGTCACATGTTTTGAGAAA+TGG + Chr2:81808395-81808414 MsG0280011272.01.T01:three_prime_UTR 35.0%
AAGCACTTCTGACACTGTTT+GGG + Chr2:81804143-81804162 MsG0280011272.01.T01:intron 40.0%
AAGTTATCCTGGTCAGCTTA+TGG - Chr2:81804475-81804494 None:intergenic 40.0%
AATTCCTGGTTTAGTGCAGT+AGG + Chr2:81806301-81806320 MsG0280011272.01.T01:intron 40.0%
ACAAAACGGAACCGATTAAC+GGG + Chr2:81803859-81803878 MsG0280011272.01.T01:intron 40.0%
ACACAATCACATATGTTGGC+AGG + Chr2:81805709-81805728 MsG0280011272.01.T01:intron 40.0%
ACCAATCCATACATAGCCAT+AGG - Chr2:81806764-81806783 None:intergenic 40.0%
ACCGAAAGGCTTAACAATCA+AGG + Chr2:81808008-81808027 MsG0280011272.01.T01:CDS 40.0%
ACCTATGGCTATGTATGGAT+TGG + Chr2:81806760-81806779 MsG0280011272.01.T01:intron 40.0%
ACCTGCAGGAAATCTTAATG+AGG + Chr2:81805322-81805341 MsG0280011272.01.T01:CDS 40.0%
ACTTAGTCTCAGGAGACATT+TGG - Chr2:81805025-81805044 None:intergenic 40.0%
ATCCAAAAAGGCCCTTAACA+TGG - Chr2:81804348-81804367 None:intergenic 40.0%
ATCCTTAGCATCCAAGATCA+TGG + Chr2:81808166-81808185 MsG0280011272.01.T01:CDS 40.0%
CACAATCACATATGTTGGCA+GGG + Chr2:81805710-81805729 MsG0280011272.01.T01:intron 40.0%
CGATCAAACCCAAATCAAAG+GGG - Chr2:81803977-81803996 None:intergenic 40.0%
CTCGATCAAACCCAAATCAA+AGG - Chr2:81803979-81803998 None:intergenic 40.0%
CTGTGTTACAGAATCTCTCA+TGG + Chr2:81803923-81803942 MsG0280011272.01.T01:intron 40.0%
GAATGGCTATGATCAGTACT+TGG + Chr2:81808372-81808391 MsG0280011272.01.T01:three_prime_UTR 40.0%
GCGATTGTCATAAGTTATCC+TGG - Chr2:81804486-81804505 None:intergenic 40.0%
GGACACACAGATAACTTTGT+GGG + Chr2:81806510-81806529 MsG0280011272.01.T01:intron 40.0%
GTAGTGCATAGCCTAATATC+AGG - Chr2:81807859-81807878 None:intergenic 40.0%
TAAAACGTCCACATGGCTAA+CGG + Chr2:81806488-81806507 MsG0280011272.01.T01:intron 40.0%
TAAGCACTTCTGACACTGTT+TGG + Chr2:81804142-81804161 MsG0280011272.01.T01:intron 40.0%
TAATCCAGTATGCCTGATTC+TGG - Chr2:81805002-81805021 None:intergenic 40.0%
TCCTCATTAAGATTTCCTGC+AGG - Chr2:81805326-81805345 None:intergenic 40.0%
TCTCTATGGCGTGAAAACTT+TGG + Chr2:81804918-81804937 MsG0280011272.01.T01:CDS 40.0%
TCTTCCAAGGTGAAAAAAGG+AGG - Chr2:81804963-81804982 None:intergenic 40.0%
TGAACAAGAGGAGAAAGGAA+GGG + Chr2:81805205-81805224 MsG0280011272.01.T01:CDS 40.0%
TGTCAAAATAGCTGGATGGA+TGG - Chr2:81807725-81807744 None:intergenic 40.0%
TGTTACAGAATCTCTCATGG+TGG + Chr2:81803926-81803945 MsG0280011272.01.T01:intron 40.0%
TGTTGTGCTACAGGAAACAT+GGG - Chr2:81805594-81805613 None:intergenic 40.0%
TTTCAGTGAGAAGAGAACGT+TGG - Chr2:81803620-81803639 None:intergenic 40.0%
! AAGGCTCGCTTAGTTTGAAT+TGG + Chr2:81805156-81805175 MsG0280011272.01.T01:CDS 40.0%
! ACTTTTTGCAGCTACGTTTG+AGG + Chr2:81807223-81807242 MsG0280011272.01.T01:intron 40.0%
! CTGGATGCACATTTTGTATC+AGG + Chr2:81807616-81807635 MsG0280011272.01.T01:CDS 40.0%
! GCAGTCTAGATGATCTGTTT+TGG + Chr2:81808200-81808219 MsG0280011272.01.T01:exon 40.0%
! GCTTTTGATGTGCTTACTTC+TGG - Chr2:81808068-81808087 None:intergenic 40.0%
! GGATGCTAAGGATTTTGTTG+GGG - Chr2:81808159-81808178 None:intergenic 40.0%
! GTATATAGGTTGGGTGGTAA+TGG + Chr2:81805989-81806008 MsG0280011272.01.T01:intron 40.0%
! TCACCACTTCTCTAAAAAGG+AGG - Chr2:81807297-81807316 None:intergenic 40.0%
! TCAGACTTTTCTCCAGAATC+AGG + Chr2:81804987-81805006 MsG0280011272.01.T01:CDS 40.0%
! TTTTCCTACTGCACTAAACC+AGG - Chr2:81806308-81806327 None:intergenic 40.0%
!! ATTCACTTGTGAGAGTGCTT+GGG + Chr2:81804396-81804415 MsG0280011272.01.T01:intron 40.0%
!! GACAAAACAAGAAGTACTCG+GGG + Chr2:81806190-81806209 MsG0280011272.01.T01:intron 40.0%
!! GTACCTCCTTTTTAGAGAAG+TGG + Chr2:81807291-81807310 MsG0280011272.01.T01:intron 40.0%
!! TATTCACTTGTGAGAGTGCT+TGG + Chr2:81804395-81804414 MsG0280011272.01.T01:intron 40.0%
!! TTGGATTGGCACACAAGATA+CGG - Chr2:81807700-81807719 None:intergenic 40.0%
!!! AATTAGGGTTTTGAATCGGG+AGG + Chr2:81803658-81803677 MsG0280011272.01.T01:five_prime_UTR 40.0%
!!! ATTAGGGTTTTGAATCGGGA+GGG + Chr2:81803659-81803678 MsG0280011272.01.T01:five_prime_UTR 40.0%
AAAACGTCCACATGGCTAAC+GGG + Chr2:81806489-81806508 MsG0280011272.01.T01:intron 45.0%
AACTGCAGTGAAGACTGTAG+CGG + Chr2:81806816-81806835 MsG0280011272.01.T01:intron 45.0%
AAGGAATTTCGCTGGACTTC+AGG - Chr2:81805302-81805321 None:intergenic 45.0%
AATAGCTGGATGGATGGTCT+TGG - Chr2:81807719-81807738 None:intergenic 45.0%
AGAATGGCAATGCAACTGCA+AGG + Chr2:81808111-81808130 MsG0280011272.01.T01:CDS 45.0%
AGACCACAACGTGGATAGTA+TGG + Chr2:81806054-81806073 MsG0280011272.01.T01:intron 45.0%
CACTTCAGAGTAACAAGGCA+TGG - Chr2:81807809-81807828 None:intergenic 45.0%
CGGCCATATTATCTGCAGAA+TGG + Chr2:81808095-81808114 MsG0280011272.01.T01:CDS 45.0%
CGTATTTCCATAAGCTGACC+AGG + Chr2:81804465-81804484 MsG0280011272.01.T01:intron 45.0%
CTACTTATTGCTCACCACTG+AGG + Chr2:81804662-81804681 MsG0280011272.01.T01:intron 45.0%
GAACAAGAGGAGAAAGGAAG+GGG + Chr2:81805206-81805225 MsG0280011272.01.T01:CDS 45.0%
GCACATCAAAAGCTCCTTCT+CGG + Chr2:81808075-81808094 MsG0280011272.01.T01:CDS 45.0%
GCATCCAGTTAGCATCTCTA+GGG - Chr2:81807604-81807623 None:intergenic 45.0%
GGAAGAGTAATCAATGCACC+AGG - Chr2:81805257-81805276 None:intergenic 45.0%
GGGACACACAGATAACTTTG+TGG + Chr2:81806509-81806528 MsG0280011272.01.T01:intron 45.0%
GGTCCCCTAACGTTTACTTT+AGG - Chr2:81806658-81806677 None:intergenic 45.0%
GTCAAAGCTTGACGTTGCAT+GGG - Chr2:81807990-81808009 None:intergenic 45.0%
GTCCATGATCTTGGATGCTA+AGG - Chr2:81808171-81808190 None:intergenic 45.0%
GTGAACAAGAGGAGAAAGGA+AGG + Chr2:81805204-81805223 MsG0280011272.01.T01:CDS 45.0%
GTGTTGTGCTACAGGAAACA+TGG - Chr2:81805595-81805614 None:intergenic 45.0%
TCCAAGGTGAAAAAAGGAGG+CGG - Chr2:81804960-81804979 None:intergenic 45.0%
TGCAGATAATATGGCCGAGA+AGG - Chr2:81808092-81808111 None:intergenic 45.0%
TGCATAGCCTAATATCAGGG+TGG - Chr2:81807855-81807874 None:intergenic 45.0%
TGCATCCAGTTAGCATCTCT+AGG - Chr2:81807605-81807624 None:intergenic 45.0%
TGGCTATGATCAGTACTTGG+TGG + Chr2:81808375-81808394 MsG0280011272.01.T01:three_prime_UTR 45.0%
TTCTCCAGAATCAGGCATAC+TGG + Chr2:81804995-81805014 MsG0280011272.01.T01:CDS 45.0%
TTGCTGCAGGAATTCCCATA+TGG + Chr2:81806092-81806111 MsG0280011272.01.T01:intron 45.0%
! AAAGAGTGGTGGTGAACAAG+AGG + Chr2:81805193-81805212 MsG0280011272.01.T01:CDS 45.0%
! AACGTCAAGCTTTGACCGAA+AGG + Chr2:81807994-81808013 MsG0280011272.01.T01:CDS 45.0%
! CAAGAGCATAATGAGGGACA+GGG + Chr2:81806159-81806178 MsG0280011272.01.T01:intron 45.0%
! CATGCCTTGTTACTCTGAAG+TGG + Chr2:81807807-81807826 MsG0280011272.01.T01:intron 45.0%
! CTCCATGTTAAGGGCCTTTT+TGG + Chr2:81804343-81804362 MsG0280011272.01.T01:intron 45.0%
! GAATTTTCGACTCCAGCGAA+AGG + Chr2:81805080-81805099 MsG0280011272.01.T01:CDS 45.0%
! GCTCGCTTAGTTTGAATTGG+TGG + Chr2:81805159-81805178 MsG0280011272.01.T01:CDS 45.0%
! GGATTTTGTTGGGGAAGCAA+TGG - Chr2:81808150-81808169 None:intergenic 45.0%
! TATGCTCTGGGTTGAATTCC+TGG + Chr2:81806287-81806306 MsG0280011272.01.T01:intron 45.0%
! TCAAACTAAGCGAGCCTTGT+TGG - Chr2:81805154-81805173 None:intergenic 45.0%
! TCAAGAGCATAATGAGGGAC+AGG + Chr2:81806158-81806177 MsG0280011272.01.T01:intron 45.0%
! TGGTGGCGAATTGAAGTGAA+GGG - Chr2:81803733-81803752 None:intergenic 45.0%
! TTGGACTGGAAAACTTTCCC+CGG - Chr2:81804878-81804897 None:intergenic 45.0%
!! ACCATTTTAGCGGACATTCG+TGG - Chr2:81806874-81806893 None:intergenic 45.0%
!! AGCATAAGATGTGCTGGCTT+CGG - Chr2:81805111-81805130 None:intergenic 45.0%
!! CAGGAGCATCTTCTTCTCTA+TGG + Chr2:81804904-81804923 MsG0280011272.01.T01:CDS 45.0%
!! TTCACTTGTGAGAGTGCTTG+GGG + Chr2:81804397-81804416 MsG0280011272.01.T01:intron 45.0%
AAGGTGAAAAAAGGAGGCGG+AGG - Chr2:81804957-81804976 None:intergenic 50.0%
AATGCAACTGCAAGGCAGAC+TGG + Chr2:81808119-81808138 MsG0280011272.01.T01:CDS 50.0%
ACGGTGCAGTATAGAGAGAG+AGG - Chr2:81803778-81803797 None:intergenic 50.0%
AGTGACTGTCTACCAGACCT+AGG - Chr2:81804819-81804838 None:intergenic 50.0%
CAGCGAAATTCCTTACCTGC+AGG + Chr2:81805308-81805327 MsG0280011272.01.T01:CDS 50.0%
CCACAACGTGGATAGTATGG+TGG + Chr2:81806057-81806076 MsG0280011272.01.T01:intron 50.0%
CCACCATACTATCCACGTTG+TGG - Chr2:81806060-81806079 None:intergenic 50.0%
CTCACTCCTACCTGCCATAT+GGG - Chr2:81806109-81806128 None:intergenic 50.0%
CTGCAGGTAAGGAATTTCGC+TGG - Chr2:81805310-81805329 None:intergenic 50.0%
GAGAAGAAGATGCTCCTGAC+TGG - Chr2:81804902-81804921 None:intergenic 50.0%
GCCACGAATGTCCGCTAAAA+TGG + Chr2:81806870-81806889 MsG0280011272.01.T01:intron 50.0%
GGAATTCCCATATGGCAGGT+AGG + Chr2:81806100-81806119 MsG0280011272.01.T01:intron 50.0%
GGTCAAAGCTTGACGTTGCA+TGG - Chr2:81807991-81808010 None:intergenic 50.0%
GGTGGTGAACAAGAGGAGAA+AGG + Chr2:81805200-81805219 MsG0280011272.01.T01:CDS 50.0%
GTAGATGTCAGACCACAACG+TGG + Chr2:81806045-81806064 MsG0280011272.01.T01:intron 50.0%
TGAAAAAAGGAGGCGGAGGA+AGG - Chr2:81804953-81804972 None:intergenic 50.0%
TGACGTTGCATGGGATCCAA+GGG - Chr2:81807981-81808000 None:intergenic 50.0%
TGCAGGAATTCCCATATGGC+AGG + Chr2:81806096-81806115 MsG0280011272.01.T01:intron 50.0%
TGTTCACCACCACTCTTTGC+AGG - Chr2:81805191-81805210 None:intergenic 50.0%
TTGACGTTGCATGGGATCCA+AGG - Chr2:81807982-81808001 None:intergenic 50.0%
! ATAACTTTGTGGGTGCCACG+TGG + Chr2:81806520-81806539 MsG0280011272.01.T01:intron 50.0%
! CTCTGTCTGAAACAACCACG+TGG - Chr2:81806538-81806557 None:intergenic 50.0%
! CTGGATGGATGGTCTTGGAT+TGG - Chr2:81807714-81807733 None:intergenic 50.0%
! GTGGTGGCGAATTGAAGTGA+AGG - Chr2:81803734-81803753 None:intergenic 50.0%
! TTTTCCAGTCCAAGCCAGTC+AGG + Chr2:81804885-81804904 MsG0280011272.01.T01:CDS 50.0%
!! AGAGAAGTACCTGGTAGTGG+TGG - Chr2:81803753-81803772 None:intergenic 50.0%
!! AGAGAGGAGAGAGAAGTACC+TGG - Chr2:81803762-81803781 None:intergenic 50.0%
!! GAGAGAGAAGTACCTGGTAG+TGG - Chr2:81803756-81803775 None:intergenic 50.0%
!! TCACTTGTGAGAGTGCTTGG+GGG + Chr2:81804398-81804417 MsG0280011272.01.T01:intron 50.0%
!! TTTTAGCGGACATTCGTGGC+CGG - Chr2:81806870-81806889 None:intergenic 50.0%
!!! TCCGCCTCCTTTTTTCACCT+TGG + Chr2:81804956-81804975 MsG0280011272.01.T01:CDS 50.0%
AATTCGCCACCACCACTACC+AGG + Chr2:81803741-81803760 MsG0280011272.01.T01:five_prime_UTR 55.0%
ACTGGAAAACTTTCCCCGGC+GGG - Chr2:81804874-81804893 None:intergenic 55.0%
CCACAGCGCAAAGAACTCCT+AGG + Chr2:81804799-81804818 MsG0280011272.01.T01:CDS 55.0%
CCATATGGCAGGTAGGAGTG+AGG + Chr2:81806107-81806126 MsG0280011272.01.T01:intron 55.0%
CCTAGGAGTTCTTTGCGCTG+TGG - Chr2:81804802-81804821 None:intergenic 55.0%
CCTCACTCCTACCTGCCATA+TGG - Chr2:81806110-81806129 None:intergenic 55.0%
CTGGCAGTGGGTAGAGGTAA+GGG - Chr2:81808041-81808060 None:intergenic 55.0%
CTGGCCCTAGAGATGCTAAC+TGG + Chr2:81807597-81807616 MsG0280011272.01.T01:CDS 55.0%
GACTGGAAAACTTTCCCCGG+CGG - Chr2:81804875-81804894 None:intergenic 55.0%
GCATAATGAGGGACAGGGTG+AGG + Chr2:81806164-81806183 MsG0280011272.01.T01:intron 55.0%
GCGCAAAGAACTCCTAGGTC+TGG + Chr2:81804804-81804823 MsG0280011272.01.T01:CDS 55.0%
GGGGTGCAGCAAAACCAACA+AGG + Chr2:81805137-81805156 MsG0280011272.01.T01:CDS 55.0%
TCGTCACCTGCAAAGAGTGG+TGG + Chr2:81805182-81805201 MsG0280011272.01.T01:CDS 55.0%
TCTTCCTCCACCACCAGAAG+TGG + Chr2:81805271-81805290 MsG0280011272.01.T01:CDS 55.0%
TGGTCGTCACCTGCAAAGAG+TGG + Chr2:81805179-81805198 MsG0280011272.01.T01:CDS 55.0%
TGTGCTTACTTCTGGGTGCC+TGG - Chr2:81808060-81808079 None:intergenic 55.0%
TGTGTGTCCCGTTAGCCATG+TGG - Chr2:81806499-81806518 None:intergenic 55.0%
! ACTTCAGGCCTTGCCACTTC+TGG - Chr2:81805287-81805306 None:intergenic 55.0%
! GAAGATGCTCCTGACTGGCT+TGG - Chr2:81804897-81804916 None:intergenic 55.0%
! GAGCTGAGAGCATACCTCAG+TGG - Chr2:81804679-81804698 None:intergenic 55.0%
!! CAGTTAGCATCTCTAGGGCC+AGG - Chr2:81807599-81807618 None:intergenic 55.0%
!! GAAGTACCTGGTAGTGGTGG+TGG - Chr2:81803750-81803769 None:intergenic 55.0%
!!! TCGGGGCCTTTTTTGCAGAG+AGG + Chr2:81806207-81806226 MsG0280011272.01.T01:intron 55.0%
ACTTCTGGGTGCCTGGCAGT+GGG - Chr2:81808053-81808072 None:intergenic 60.0%
AGGAAGGGGTTCTCCAGTCG+AGG + Chr2:81805220-81805239 MsG0280011272.01.T01:CDS 60.0%
ATCCCCTGTTAATGCCCGCC+GGG + Chr2:81804857-81804876 MsG0280011272.01.T01:CDS 60.0%
CATCCCCTGTTAATGCCCGC+CGG + Chr2:81804856-81804875 MsG0280011272.01.T01:CDS 60.0%
CCTGGCAGTGGGTAGAGGTA+AGG - Chr2:81808042-81808061 None:intergenic 60.0%
CCTTACCTCTACCCACTGCC+AGG + Chr2:81808039-81808058 MsG0280011272.01.T01:CDS 60.0%
CTCCACCACCAGAAGTGGCA+AGG + Chr2:81805276-81805295 MsG0280011272.01.T01:CDS 60.0%
GCAACTGCAAGGCAGACTGG+AGG + Chr2:81808122-81808141 MsG0280011272.01.T01:CDS 60.0%
GCTTCGGACTTGCCTTTCGC+TGG - Chr2:81805095-81805114 None:intergenic 60.0%
GGAAGGGGTTCTCCAGTCGA+GGG + Chr2:81805221-81805240 MsG0280011272.01.T01:CDS 60.0%
TACTTCTGGGTGCCTGGCAG+TGG - Chr2:81808054-81808073 None:intergenic 60.0%
TTCCCCGGCGGGCATTAACA+GGG - Chr2:81804863-81804882 None:intergenic 60.0%
TTTCCCCGGCGGGCATTAAC+AGG - Chr2:81804864-81804883 None:intergenic 60.0%
! TCAGGCCTTGCCACTTCTGG+TGG - Chr2:81805284-81805303 None:intergenic 60.0%
!! CTTGCCACTTCTGGTGGTGG+AGG - Chr2:81805278-81805297 None:intergenic 60.0%
!! TGCTCCTGACTGGCTTGGAC+TGG - Chr2:81804892-81804911 None:intergenic 60.0%
GGCTGAACCACACCCTCGAC+TGG - Chr2:81805236-81805255 None:intergenic 65.0%
GGGTTCTCCAGTCGAGGGTG+TGG + Chr2:81805226-81805245 MsG0280011272.01.T01:CDS 65.0%
TCCCCGGCGGGCATTAACAG+GGG - Chr2:81804862-81804881 None:intergenic 65.0%
TCCCCTGTTAATGCCCGCCG+GGG + Chr2:81804858-81804877 MsG0280011272.01.T01:CDS 65.0%
! GGCCTTGCCACTTCTGGTGG+TGG - Chr2:81805281-81805300 None:intergenic 65.0%
! GTCGAGGGTGTGGTTCAGCC+TGG + Chr2:81805236-81805255 MsG0280011272.01.T01:CDS 65.0%
GGGTGCCTGGCAGTGGGTAG+AGG - Chr2:81808047-81808066 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81803569 81808529 81803569 ID=MsG0280011272.01;Name=MsG0280011272.01
Chr2 mRNA 81803569 81808529 81803569 ID=MsG0280011272.01.T01;Parent=MsG0280011272.01;Name=MsG0280011272.01.T01;_AED=0.49;_eAED=0.49;_QI=232|1|1|1|0.66|0.5|4|321|330
Chr2 exon 81803569 81803762 81803569 ID=MsG0280011272.01.T01:exon:12197;Parent=MsG0280011272.01.T01
Chr2 exon 81804754 81805366 81804754 ID=MsG0280011272.01.T01:exon:12198;Parent=MsG0280011272.01.T01
Chr2 exon 81807526 81807637 81807526 ID=MsG0280011272.01.T01:exon:12199;Parent=MsG0280011272.01.T01
Chr2 exon 81807903 81808529 81807903 ID=MsG0280011272.01.T01:exon:12200;Parent=MsG0280011272.01.T01
Chr2 five_prime_UTR 81803569 81803762 81803569 ID=MsG0280011272.01.T01:five_prime_utr;Parent=MsG0280011272.01.T01
Chr2 five_prime_UTR 81804754 81804791 81804754 ID=MsG0280011272.01.T01:five_prime_utr;Parent=MsG0280011272.01.T01
Chr2 CDS 81804792 81805366 81804792 ID=MsG0280011272.01.T01:cds;Parent=MsG0280011272.01.T01
Chr2 CDS 81807526 81807637 81807526 ID=MsG0280011272.01.T01:cds;Parent=MsG0280011272.01.T01
Chr2 CDS 81807903 81808208 81807903 ID=MsG0280011272.01.T01:cds;Parent=MsG0280011272.01.T01
Chr2 three_prime_UTR 81808209 81808529 81808209 ID=MsG0280011272.01.T01:three_prime_utr;Parent=MsG0280011272.01.T01
Gene Sequence

>MsG0280011272.01.T01

ATGAGCACCACAGCGCAAAGAACTCCTAGGTCTGGTAGACAGTCACTATTTTTTCAGGATTTAGCATCCCCTGTTAATGCCCGCCGGGGAAAGTTTTCCAGTCCAAGCCAGTCAGGAGCATCTTCTTCTCTATGGCGTGAAAACTTTGGTAATTCGGACCTTCCTCCGCCTCCTTTTTTCACCTTGGAAGATAGATCAGACTTTTCTCCAGAATCAGGCATACTGGATTACCAAATGTCTCCTGAGACTAAGTCAGACAATAAAACTCCCATCCAAACTCCAAATAGAGAATTTTCGACTCCAGCGAAAGGCAAGTCCGAAGCCAGCACATCTTATGCTTTAAGAGGGGTGCAGCAAAACCAACAAGGCTCGCTTAGTTTGAATTGGTGGTCGTCACCTGCAAAGAGTGGTGGTGAACAAGAGGAGAAAGGAAGGGGTTCTCCAGTCGAGGGTGTGGTTCAGCCTGGTGCATTGATTACTCTTCCTCCACCACCAGAAGTGGCAAGGCCTGAAGTCCAGCGAAATTCCTTACCTGCAGGAAATCTTAATGAGGAAGAATGGGTAACAGTATATGGATTTTCTCCAAATGATACTAATTTGGTTTTAAGGGAGTTTGAAAAATGTGGTGAAATTTTGAAACATGTTCCTGGCCCTAGAGATGCTAACTGGATGCACATTTTGTATCAGAATCGATCTGCTGCACAAAATGCTCTCAACAAGAATGGAATACAAATTAATGGAGTCCTAATTATTGGTGTGAAACCCTTGGATCCCATGCAACGTCAAGCTTTGACCGAAAGGCTTAACAATCAAGGATTTATGCCCTTACCTCTACCCACTGCCAGGCACCCAGAAGTAAGCACATCAAAAGCTCCTTCTCGGCCATATTATCTGCAGAATGGCAATGCAACTGCAAGGCAGACTGGAGGTACCATTGCTTCCCCAACAAAATCCTTAGCATCCAAGATCATGGACTTGATGTTTGCAGTCTAG

Protein sequence

>MsG0280011272.01.T01

MSTTAQRTPRSGRQSLFFQDLASPVNARRGKFSSPSQSGASSSLWRENFGNSDLPPPPFFTLEDRSDFSPESGILDYQMSPETKSDNKTPIQTPNREFSTPAKGKSEASTSYALRGVQQNQQGSLSLNWWSSPAKSGGEQEEKGRGSPVEGVVQPGALITLPPPPEVARPEVQRNSLPAGNLNEEEWVTVYGFSPNDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSAAQNALNKNGIQINGVLIIGVKPLDPMQRQALTERLNNQGFMPLPLPTARHPEVSTSKAPSRPYYLQNGNATARQTGGTIASPTKSLASKIMDLMFAV*