AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045602.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045602.01.T01 MTR_5g074430 92.478 226 16 1 21 245 9 234 5.40e-142 397
MsG0880045602.01.T01 MTR_5g074430 92.035 226 16 2 21 245 9 233 1.98e-139 390
MsG0880045602.01.T01 MTR_1g055405 90.503 179 17 0 67 245 101 279 4.53e-106 308
MsG0880045602.01.T01 MTR_4g084990 58.723 235 87 4 20 245 12 245 1.21e-92 273
MsG0880045602.01.T01 MTR_4g084990 55.794 233 96 2 20 245 12 244 6.46e-92 271
MsG0880045602.01.T01 MTR_7g108715 55.625 160 61 4 95 245 3 161 2.20e-51 165
MsG0880045602.01.T01 MTR_4g084990 53.237 139 64 1 20 157 12 150 3.16e-49 160
MsG0880045602.01.T01 MTR_3g072860 79.747 79 16 0 58 136 62 140 2.45e-25 97.8
MsG0880045602.01.T01 MTR_7g108725 59.375 64 26 0 20 83 12 75 7.94e-23 89.4
MsG0880045602.01.T01 MTR_4g085040 59.091 66 27 0 20 85 12 77 4.65e-21 87.0
MsG0880045602.01.T01 MTR_4g085000 59.649 57 23 0 20 76 12 68 1.92e-18 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045602.01.T01 AT2G30260 65.487 226 75 2 21 245 9 232 9.55e-109 313
MsG0880045602.01.T01 AT1G06960 67.556 225 69 2 21 245 9 229 3.44e-107 309
MsG0880045602.01.T01 AT1G06960 65.152 198 65 2 48 245 7 200 1.46e-88 261
MsG0880045602.01.T01 AT2G47580 53.617 235 98 4 21 245 17 250 7.40e-80 240
MsG0880045602.01.T01 AT2G30260 65.714 140 43 1 21 160 9 143 2.67e-62 192
MsG0880045602.01.T01 AT1G06960 74.797 123 31 0 21 143 9 131 6.57e-61 189
MsG0880045602.01.T01 AT1G06960 61.589 151 54 2 95 245 4 150 5.54e-56 176
MsG0880045602.01.T01 AT1G06960 80.000 95 19 0 21 115 9 103 4.47e-55 173
MsG0880045602.01.T01 AT1G06960 71.875 96 27 0 48 143 7 102 2.85e-42 140

Find 52 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCAATATGGAAGGATTT+TGG 0.143011 8:+61621810 MsG0880045602.01.T01:CDS
GAACCCACTTACTGTGATTT+TGG 0.155025 8:+61620037 MsG0880045602.01.T01:CDS
ATTGAGATTCTTAATGTAAA+TGG 0.200962 8:-61621740 None:intergenic
CTTGCTGTTGTGCAGCTTGC+AGG 0.241883 8:+61621710 MsG0880045602.01.T01:intron
CATCTGTCGGACTGCATTAC+TGG 0.264920 8:-61621902 None:intergenic
TATTGCTTATTCTCTCAATA+TGG 0.294966 8:+61621799 MsG0880045602.01.T01:CDS
TTTAGCAAAGTTTATAATCA+TGG 0.346975 8:-61622382 None:intergenic
AAACAATCCGCCGTGCCTAA+TGG 0.359918 8:+61622078 MsG0880045602.01.T01:CDS
TGTTGGGAGCAGCTGCCTCT+TGG 0.368601 8:-61622161 None:intergenic
GTTGGGAGCAGCTGCCTCTT+GGG 0.371933 8:-61622160 None:intergenic
GCCTCTTGGGCACCGGACCC+TGG 0.377560 8:-61622147 None:intergenic
CTCTATGAACAAAATATTGT+TGG 0.409581 8:-61622178 None:intergenic
ACACAGGCCTCGTTCTGTCC+AGG 0.411069 8:+61622129 MsG0880045602.01.T01:CDS
GCCTCGTTCTGTCCAGGGTC+CGG 0.422754 8:+61622135 MsG0880045602.01.T01:CDS
ACTTTGCCTTATGAAATTAT+CGG 0.436569 8:+61622201 MsG0880045602.01.T01:CDS
AGCAGCTGCCTCTTGGGCAC+CGG 0.444275 8:-61622154 None:intergenic
ATGGCAATGCAGGCTCTTCA+AGG 0.447147 8:+61622336 MsG0880045602.01.T01:CDS
CTTGCACCATGCGTTCCATT+AGG 0.455445 8:-61622093 None:intergenic
CATGTCTGTCCTCGAAGCTT+AGG 0.459916 8:-61621853 None:intergenic
GCAATCATCCATGGCAATGC+AGG 0.462902 8:+61622326 MsG0880045602.01.T01:CDS
AAATCTATAAACGCGATACC+TGG 0.476604 8:-61622291 None:intergenic
TTAGCAAAGTTTATAATCAT+GGG 0.479041 8:-61622381 None:intergenic
TCTATGAACAAAATATTGTT+GGG 0.492844 8:-61622177 None:intergenic
AAGCGCACTTCCTTAAAACC+TGG 0.502688 8:-61622255 None:intergenic
ATCCTACCGATAATTTCATA+AGG 0.508790 8:-61622207 None:intergenic
TTTATAGATTTCGAAGATGA+GGG 0.517680 8:+61622303 MsG0880045602.01.T01:CDS
GTTACCAAAATCACAGTAAG+TGG 0.518556 8:-61620041 None:intergenic
AAGTCAGACTATATTGCTAA+AGG 0.526235 8:+61621976 MsG0880045602.01.T01:CDS
CGCTTGATCAAAGCAAAGCC+AGG 0.527219 8:+61622273 MsG0880045602.01.T01:CDS
GCTTATTCTCTCAATATGGA+AGG 0.527328 8:+61621803 MsG0880045602.01.T01:CDS
CTAAAGACACCTAAGCTTCG+AGG 0.536303 8:+61621844 MsG0880045602.01.T01:CDS
TCCAGGGTCCGGTGCCCAAG+AGG 0.541161 8:+61622146 MsG0880045602.01.T01:CDS
GAGAGGGAAGCTTTGTTCCA+AGG 0.546226 8:+61621998 MsG0880045602.01.T01:CDS
GACTATATTGCTAAAGGAGA+GGG 0.549152 8:+61621982 MsG0880045602.01.T01:CDS
AGAGGGAAGCTTTGTTCCAA+GGG 0.550069 8:+61621999 MsG0880045602.01.T01:CDS
CACAGGCCTCGTTCTGTCCA+GGG 0.557892 8:+61622130 MsG0880045602.01.T01:CDS
GTTTATAGATTTCGAAGATG+AGG 0.575369 8:+61622302 MsG0880045602.01.T01:CDS
AGATGAGGGGCAATCATCCA+TGG 0.580873 8:+61622317 MsG0880045602.01.T01:CDS
GCCGTGCCTAATGGAACGCA+TGG 0.590317 8:+61622087 MsG0880045602.01.T01:CDS
AGCGCACTTCCTTAAAACCT+GGG 0.597463 8:-61622254 None:intergenic
TTGAAGAGCCTGCATTGCCA+TGG 0.598469 8:-61622334 None:intergenic
CTAAGCTTCGAGGACAGACA+TGG 0.601420 8:+61621854 MsG0880045602.01.T01:CDS
ACCATGCGTTCCATTAGGCA+CGG 0.611644 8:-61622088 None:intergenic
ACCGGACCCTGGACAGAACG+AGG 0.618597 8:-61622136 None:intergenic
TGCCTTATGAAATTATCGGT+AGG 0.620157 8:+61622205 MsG0880045602.01.T01:CDS
GGAACGCATGGTGCAAGTAA+TGG 0.624842 8:+61622099 MsG0880045602.01.T01:CDS
TTATAGATTTCGAAGATGAG+GGG 0.628802 8:+61622304 MsG0880045602.01.T01:CDS
AGACTATATTGCTAAAGGAG+AGG 0.640787 8:+61621981 MsG0880045602.01.T01:CDS
AAGTAATGGTGGCTCAACAC+AGG 0.643686 8:+61622113 MsG0880045602.01.T01:CDS
TTACCAAAATCACAGTAAGT+GGG 0.662759 8:-61620040 None:intergenic
ACGCATGGTGCAAGTAATGG+TGG 0.702100 8:+61622102 MsG0880045602.01.T01:CDS
ATGCGTTCCATTAGGCACGG+CGG 0.770119 8:-61622085 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTAAGTTTGTATAA+GGG - Chr8:61620438-61620457 None:intergenic 10.0%
!! ATAAAAATAATAGAAGATCA+AGG - Chr8:61621396-61621415 None:intergenic 15.0%
!! CATAATGTTGAAAAAATAAT+TGG + Chr8:61621094-61621113 MsG0880045602.01.T01:intron 15.0%
!!! ATTATTTTTTCAACATTATG+AGG - Chr8:61621094-61621113 None:intergenic 15.0%
!!! GTTATATTTAAGTTTGTATA+AGG - Chr8:61620439-61620458 None:intergenic 15.0%
!!! TAATATGCATACTTTTTTTT+TGG + Chr8:61620720-61620739 MsG0880045602.01.T01:intron 15.0%
!!! TCATAGATTTTTCATAAAAT+GGG - Chr8:61621936-61621955 None:intergenic 15.0%
!! AATGTTGAAAAAATAATTGG+CGG + Chr8:61621097-61621116 MsG0880045602.01.T01:intron 20.0%
!! ATACTTCAAGAATTTATTGT+CGG - Chr8:61620769-61620788 None:intergenic 20.0%
!! ATTGAGATTCTTAATGTAAA+TGG - Chr8:61621743-61621762 None:intergenic 20.0%
!! TATGATCAATCGTAAAAAAA+AGG - Chr8:61621472-61621491 None:intergenic 20.0%
!! TCTATGAACAAAATATTGTT+GGG - Chr8:61622180-61622199 None:intergenic 20.0%
!! TTAGCAAAGTTTATAATCAT+GGG - Chr8:61622384-61622403 None:intergenic 20.0%
!! TTAGCTACTGTAATAAAAAA+AGG - Chr8:61621507-61621526 None:intergenic 20.0%
!! TTGAACTATTATTAGTGTAA+TGG + Chr8:61621238-61621257 MsG0880045602.01.T01:intron 20.0%
!! TTTAGCAAAGTTTATAATCA+TGG - Chr8:61622385-61622404 None:intergenic 20.0%
!!! ATTTCTAAGATATACAAAGT+GGG - Chr8:61620182-61620201 None:intergenic 20.0%
!!! CTCATAGATTTTTCATAAAA+TGG - Chr8:61621937-61621956 None:intergenic 20.0%
!!! TATGGTTTTGATTTTCATAT+GGG + Chr8:61620562-61620581 MsG0880045602.01.T01:intron 20.0%
! AACCAAAATATGTGAAGTAA+TGG - Chr8:61620697-61620716 None:intergenic 25.0%
! AAGCAACAAATTTCCAAAAA+AGG - Chr8:61621318-61621337 None:intergenic 25.0%
! ACTTTGCCTTATGAAATTAT+CGG + Chr8:61622201-61622220 MsG0880045602.01.T01:CDS 25.0%
! ATGTTGAAAAAATAATTGGC+GGG + Chr8:61621098-61621117 MsG0880045602.01.T01:intron 25.0%
! CTCTATGAACAAAATATTGT+TGG - Chr8:61622181-61622200 None:intergenic 25.0%
! TAAAGAACCTCATAATACTA+AGG - Chr8:61621270-61621289 None:intergenic 25.0%
! TAAGTTTGTATAAGGGTTTA+GGG - Chr8:61620431-61620450 None:intergenic 25.0%
! TACTTCAAGAATTTATTGTC+GGG - Chr8:61620768-61620787 None:intergenic 25.0%
! TATTGCTTATTCTCTCAATA+TGG + Chr8:61621799-61621818 MsG0880045602.01.T01:CDS 25.0%
! TTAAGTTTGTATAAGGGTTT+AGG - Chr8:61620432-61620451 None:intergenic 25.0%
! TTTATAGATTTCGAAGATGA+GGG + Chr8:61622303-61622322 MsG0880045602.01.T01:CDS 25.0%
!! ATTTGCACTGAAATTTTGAA+AGG + Chr8:61620345-61620364 MsG0880045602.01.T01:intron 25.0%
!! TTATAATCATGGGATTTTGT+GGG - Chr8:61622374-61622393 None:intergenic 25.0%
!! TTTATAATCATGGGATTTTG+TGG - Chr8:61622375-61622394 None:intergenic 25.0%
!!! ATTTGAAACTGATTTGTTCA+GGG - Chr8:61620946-61620965 None:intergenic 25.0%
!!! CATTTCTAAGATATACAAAG+TGG - Chr8:61620183-61620202 None:intergenic 25.0%
!!! CTATGGTTTTGATTTTCATA+TGG + Chr8:61620561-61620580 MsG0880045602.01.T01:intron 25.0%
!!! CTGAAACATTGATTCATTAA+TGG - Chr8:61620921-61620940 None:intergenic 25.0%
!!! TTTATTTGTCACCATTTTTG+CGG + Chr8:61621127-61621146 MsG0880045602.01.T01:intron 25.0%
AAGTCAGACTATATTGCTAA+AGG + Chr8:61621976-61621995 MsG0880045602.01.T01:CDS 30.0%
ACAACCTTTCATATTGTTTC+TGG + Chr8:61621340-61621359 MsG0880045602.01.T01:intron 30.0%
AGTAGCTAAAAAAAGAAACC+AGG + Chr8:61621518-61621537 MsG0880045602.01.T01:intron 30.0%
AGTATTATGAGGTTCTTTAC+TGG + Chr8:61621271-61621290 MsG0880045602.01.T01:intron 30.0%
ATCCTACCGATAATTTCATA+AGG - Chr8:61622210-61622229 None:intergenic 30.0%
CAATACACTATTGAGAAACA+TGG - Chr8:61620522-61620541 None:intergenic 30.0%
CAGTGCAAATAAATCTAAAC+CGG - Chr8:61620335-61620354 None:intergenic 30.0%
GCTAAAAATGTTTCAGTTGT+TGG + Chr8:61621057-61621076 MsG0880045602.01.T01:intron 30.0%
GGAAAAGAAAAAGAAACAAG+AGG + Chr8:61622020-61622039 MsG0880045602.01.T01:CDS 30.0%
GTGTTACCAAAAAGCTTATT+AGG - Chr8:61620070-61620089 None:intergenic 30.0%
GTTTATAGATTTCGAAGATG+AGG + Chr8:61622302-61622321 MsG0880045602.01.T01:CDS 30.0%
TTACCAAAATCACAGTAAGT+GGG - Chr8:61620043-61620062 None:intergenic 30.0%
TTATAGATTTCGAAGATGAG+GGG + Chr8:61622304-61622323 MsG0880045602.01.T01:CDS 30.0%
! AACACACCTAATAAGCTTTT+TGG + Chr8:61620061-61620080 MsG0880045602.01.T01:CDS 30.0%
! ATCAGTCTATACATTTTACG+TGG + Chr8:61620643-61620662 MsG0880045602.01.T01:intron 30.0%
! CACCATTACTTCACATATTT+TGG + Chr8:61620692-61620711 MsG0880045602.01.T01:intron 30.0%
! GAGAGTATGAGTTAAAACTA+AGG - Chr8:61620619-61620638 None:intergenic 30.0%
! GCTAACAATCAATTTTGTTC+AGG + Chr8:61620222-61620241 MsG0880045602.01.T01:intron 30.0%
! TATAATCATGGGATTTTGTG+GGG - Chr8:61622373-61622392 None:intergenic 30.0%
! TGAAAAATACCCAGGTTTTA+AGG + Chr8:61622245-61622264 MsG0880045602.01.T01:CDS 30.0%
! TGAGCTTTTGAATATACTTG+CGG + Chr8:61620122-61620141 MsG0880045602.01.T01:intron 30.0%
! TGTTTCTTTTTCTTTTCCCT+TGG - Chr8:61622018-61622037 None:intergenic 30.0%
!! GATTTGAAACTGATTTGTTC+AGG - Chr8:61620947-61620966 None:intergenic 30.0%
AAAATTAGAACCTGTTGTGC+AGG - Chr8:61620829-61620848 None:intergenic 35.0%
AAATCTATAAACGCGATACC+TGG - Chr8:61622294-61622313 None:intergenic 35.0%
ACTCATCAACAACTGATCTA+TGG + Chr8:61620544-61620563 MsG0880045602.01.T01:intron 35.0%
AGACTATATTGCTAAAGGAG+AGG + Chr8:61621981-61622000 MsG0880045602.01.T01:CDS 35.0%
AGATATACAAAGTGGGTGTT+TGG - Chr8:61620175-61620194 None:intergenic 35.0%
AGTCAAAAGACCGACAATAA+TGG - Chr8:61620150-61620169 None:intergenic 35.0%
ATAAATCTAAACCGGTAAGC+TGG - Chr8:61620327-61620346 None:intergenic 35.0%
CACAGAGTTTATTAGAGCTA+TGG - Chr8:61620895-61620914 None:intergenic 35.0%
GAAGCCAGAAACAATATGAA+AGG - Chr8:61621347-61621366 None:intergenic 35.0%
GACTATATTGCTAAAGGAGA+GGG + Chr8:61621982-61622001 MsG0880045602.01.T01:CDS 35.0%
GAGCTTTCCTTAGTATTATG+AGG + Chr8:61621260-61621279 MsG0880045602.01.T01:intron 35.0%
GCTTATTCTCTCAATATGGA+AGG + Chr8:61621803-61621822 MsG0880045602.01.T01:CDS 35.0%
GTTACCAAAATCACAGTAAG+TGG - Chr8:61620044-61620063 None:intergenic 35.0%
TGCCTTATGAAATTATCGGT+AGG + Chr8:61622205-61622224 MsG0880045602.01.T01:CDS 35.0%
TTCAATGAGACGATACTTCA+AGG - Chr8:61620867-61620886 None:intergenic 35.0%
! ATGCTCTTTGAAAAATACCC+AGG + Chr8:61622237-61622256 MsG0880045602.01.T01:CDS 35.0%
! CTCTCAATATGGAAGGATTT+TGG + Chr8:61621810-61621829 MsG0880045602.01.T01:CDS 35.0%
!! TTCATATTGTTTCTGGCTTC+TGG + Chr8:61621347-61621366 MsG0880045602.01.T01:intron 35.0%
!!! TTAGTGTATGCAGCCTTTTT+TGG + Chr8:61621302-61621321 MsG0880045602.01.T01:intron 35.0%
AAAAAAGAAACCAGGAAGCG+CGG + Chr8:61621526-61621545 MsG0880045602.01.T01:intron 40.0%
ACGGATTTAAGCAGAGTTGT+TGG + Chr8:61621594-61621613 MsG0880045602.01.T01:intron 40.0%
ACTTGCGGTACCATTATTGT+CGG + Chr8:61620137-61620156 MsG0880045602.01.T01:intron 40.0%
AGATGCGTTCTATTGGAAAC+AGG + Chr8:61621653-61621672 MsG0880045602.01.T01:intron 40.0%
AGGAGAAAGCTGAGAAAAAG+AGG + Chr8:61622040-61622059 MsG0880045602.01.T01:CDS 40.0%
ATGTAGCAGATGCGTTCTAT+TGG + Chr8:61621646-61621665 MsG0880045602.01.T01:intron 40.0%
ATTGAGAAACATGGCCAATG+TGG - Chr8:61620513-61620532 None:intergenic 40.0%
GGTTTCGGATTCACTGTTAT+AGG + Chr8:61621681-61621700 MsG0880045602.01.T01:intron 40.0%
! ATGGGAAGTTTTGCATCTGT+CGG - Chr8:61621918-61621937 None:intergenic 40.0%
! GAACCCACTTACTGTGATTT+TGG + Chr8:61620037-61620056 MsG0880045602.01.T01:CDS 40.0%
AACTGCAATTGTGGCCACAT+TGG + Chr8:61620496-61620515 MsG0880045602.01.T01:intron 45.0%
AACTGTCATGCGTGTACTTG+CGG + Chr8:61621619-61621638 MsG0880045602.01.T01:intron 45.0%
AAGCGCACTTCCTTAAAACC+TGG - Chr8:61622258-61622277 None:intergenic 45.0%
AAGTAATGGTGGCTCAACAC+AGG + Chr8:61622113-61622132 MsG0880045602.01.T01:CDS 45.0%
AGAGTCTCTTGCCGCAAAAA+TGG - Chr8:61621141-61621160 None:intergenic 45.0%
AGCGCACTTCCTTAAAACCT+GGG - Chr8:61622257-61622276 None:intergenic 45.0%
CGACATCACAACTGCAATTG+TGG + Chr8:61620487-61620506 MsG0880045602.01.T01:intron 45.0%
CTAAAGACACCTAAGCTTCG+AGG + Chr8:61621844-61621863 MsG0880045602.01.T01:CDS 45.0%
CTGTTTCACTACCAGCTTAC+CGG + Chr8:61620313-61620332 MsG0880045602.01.T01:intron 45.0%
GCTTAAATCCGTTCTCTGTC+TGG - Chr8:61621586-61621605 None:intergenic 45.0%
TGCGTTCTATTGGAAACAGG+AGG + Chr8:61621656-61621675 MsG0880045602.01.T01:intron 45.0%
TTCTATTGGAAACAGGAGGC+AGG + Chr8:61621660-61621679 MsG0880045602.01.T01:intron 45.0%
! GTTCTGAACCAGACAGAGAA+CGG + Chr8:61621575-61621594 MsG0880045602.01.T01:intron 45.0%
!! AGAGGGAAGCTTTGTTCCAA+GGG + Chr8:61621999-61622018 MsG0880045602.01.T01:CDS 45.0%
AAACAATCCGCCGTGCCTAA+TGG + Chr8:61622078-61622097 MsG0880045602.01.T01:CDS 50.0%
ACCATGCGTTCCATTAGGCA+CGG - Chr8:61622091-61622110 None:intergenic 50.0%
ACGCATGGTGCAAGTAATGG+TGG + Chr8:61622102-61622121 MsG0880045602.01.T01:CDS 50.0%
AGATGAGGGGCAATCATCCA+TGG + Chr8:61622317-61622336 MsG0880045602.01.T01:CDS 50.0%
ATGGCAATGCAGGCTCTTCA+AGG + Chr8:61622336-61622355 MsG0880045602.01.T01:CDS 50.0%
CATCTGTCGGACTGCATTAC+TGG - Chr8:61621905-61621924 None:intergenic 50.0%
CATGTCTGTCCTCGAAGCTT+AGG - Chr8:61621856-61621875 None:intergenic 50.0%
CGCTTGATCAAAGCAAAGCC+AGG + Chr8:61622273-61622292 MsG0880045602.01.T01:CDS 50.0%
CTAAGCTTCGAGGACAGACA+TGG + Chr8:61621854-61621873 MsG0880045602.01.T01:CDS 50.0%
CTTGCACCATGCGTTCCATT+AGG - Chr8:61622096-61622115 None:intergenic 50.0%
GAAGCGCGGAAGATTTGAGA+TGG + Chr8:61621540-61621559 MsG0880045602.01.T01:intron 50.0%
GCAATCATCCATGGCAATGC+AGG + Chr8:61622326-61622345 MsG0880045602.01.T01:CDS 50.0%
GGAACGCATGGTGCAAGTAA+TGG + Chr8:61622099-61622118 MsG0880045602.01.T01:CDS 50.0%
TCACTTCTCTCCTGCACAAC+AGG + Chr8:61620816-61620835 MsG0880045602.01.T01:intron 50.0%
TGGAAACAGGAGGCAGGTTT+CGG + Chr8:61621666-61621685 MsG0880045602.01.T01:intron 50.0%
TTGAAGAGCCTGCATTGCCA+TGG - Chr8:61622337-61622356 None:intergenic 50.0%
! CGGAAGATTTGAGATGGAGC+TGG + Chr8:61621546-61621565 MsG0880045602.01.T01:intron 50.0%
! CGGTAAGCTGGTAGTGAAAC+AGG - Chr8:61620315-61620334 None:intergenic 50.0%
!! GAGAGGGAAGCTTTGTTCCA+AGG + Chr8:61621998-61622017 MsG0880045602.01.T01:CDS 50.0%
ATGCGTTCCATTAGGCACGG+CGG - Chr8:61622088-61622107 None:intergenic 55.0%
CTCAAATCTTCCGCGCTTCC+TGG - Chr8:61621539-61621558 None:intergenic 55.0%
!! CTTGCTGTTGTGCAGCTTGC+AGG + Chr8:61621710-61621729 MsG0880045602.01.T01:intron 55.0%
ACACAGGCCTCGTTCTGTCC+AGG + Chr8:61622129-61622148 MsG0880045602.01.T01:CDS 60.0%
CACAGGCCTCGTTCTGTCCA+GGG + Chr8:61622130-61622149 MsG0880045602.01.T01:CDS 60.0%
GCCGTGCCTAATGGAACGCA+TGG + Chr8:61622087-61622106 MsG0880045602.01.T01:CDS 60.0%
GTTGGGAGCAGCTGCCTCTT+GGG - Chr8:61622163-61622182 None:intergenic 60.0%
TGTTGGGAGCAGCTGCCTCT+TGG - Chr8:61622164-61622183 None:intergenic 60.0%
ACCGGACCCTGGACAGAACG+AGG - Chr8:61622139-61622158 None:intergenic 65.0%
AGCAGCTGCCTCTTGGGCAC+CGG - Chr8:61622157-61622176 None:intergenic 65.0%
GCCTCGTTCTGTCCAGGGTC+CGG + Chr8:61622135-61622154 MsG0880045602.01.T01:CDS 65.0%
TCCAGGGTCCGGTGCCCAAG+AGG + Chr8:61622146-61622165 MsG0880045602.01.T01:CDS 70.0%
!! GCCTCTTGGGCACCGGACCC+TGG - Chr8:61622150-61622169 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 61620031 61622410 61620031 ID=MsG0880045602.01;Name=MsG0880045602.01
Chr8 mRNA 61620031 61622410 61620031 ID=MsG0880045602.01.T01;Parent=MsG0880045602.01;Name=MsG0880045602.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.5|1|1|2|0|245
Chr8 exon 61620031 61620082 61620031 ID=MsG0880045602.01.T01:exon:23500;Parent=MsG0880045602.01.T01
Chr8 exon 61621725 61622410 61621725 ID=MsG0880045602.01.T01:exon:23501;Parent=MsG0880045602.01.T01
Chr8 CDS 61620031 61620082 61620031 ID=MsG0880045602.01.T01:cds;Parent=MsG0880045602.01.T01
Chr8 CDS 61621725 61622410 61621725 ID=MsG0880045602.01.T01:cds;Parent=MsG0880045602.01.T01
Gene Sequence

>MsG0880045602.01.T01

ATGTCTGAACCCACTTACTGTGATTTTGGTAACACACCTAATAAGCTTTTTGCTTGCAGGAATCAAACCATTTACATTAAGAATCTCAATGAAAATATCAAGAAAGACGAGTTAAAGAGATCTCTGTATTGCTTATTCTCTCAATATGGAAGGATTTTGGACATCATTGCTCTAAAGACACCTAAGCTTCGAGGACAGACATGGATTTGTTTTAGTGAAGTAACTGCTGCCAGTAATGCAGTCCGACAGATGCAAAACTTCCCATTTTATGAAAAATCTATGAGAATTCAATATGCAAAAACAAAGTCAGACTATATTGCTAAAGGAGAGGGAAGCTTTGTTCCAAGGGAAAAGAAAAAGAAACAAGAGGAGAAAGCTGAGAAAAAGAGGTATGTTGATGAATCAAAACAATCCGCCGTGCCTAATGGAACGCATGGTGCAAGTAATGGTGGCTCAACACAGGCCTCGTTCTGTCCAGGGTCCGGTGCCCAAGAGGCAGCTGCTCCCAACAATATTTTGTTCATAGAGACTTTGCCTTATGAAATTATCGGTAGGATGCTCGAAATGCTCTTTGAAAAATACCCAGGTTTTAAGGAAGTGCGCTTGATCAAAGCAAAGCCAGGTATCGCGTTTATAGATTTCGAAGATGAGGGGCAATCATCCATGGCAATGCAGGCTCTTCAAGGCTTCAAAATCACCCCACAAAATCCCATGATTATAAACTTTGCTAAAAAGTAA
Protein sequence

>MsG0880045602.01.T01

MSEPTYCDFGNTPNKLFACRNQTIYIKNLNENIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQTWICFSEVTAASNAVRQMQNFPFYEKSMRIQYAKTKSDYIAKGEGSFVPREKKKKQEEKAEKKRYVDESKQSAVPNGTHGASNGGSTQASFCPGSGAQEAAAPNNILFIETLPYEIIGRMLEMLFEKYPGFKEVRLIKAKPGIAFIDFEDEGQSSMAMQALQGFKITPQNPMIINFAKK*