AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028561.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028561.01.T01 MTR_5g074430 98.291 234 4 0 1 234 1 234 3.11e-174 478
MsG0580028561.01.T01 MTR_5g074430 97.863 234 4 1 1 234 1 233 1.56e-171 471
MsG0580028561.01.T01 MTR_1g055405 94.944 178 8 1 57 234 103 279 1.55e-110 319
MsG0580028561.01.T01 MTR_4g084990 62.025 237 79 4 7 234 11 245 8.71e-100 290
MsG0580028561.01.T01 MTR_4g084990 59.829 234 88 1 7 234 11 244 8.99e-100 290
MsG0580028561.01.T01 MTR_7g108715 57.764 161 57 4 83 234 3 161 3.41e-55 174
MsG0580028561.01.T01 MTR_4g084990 55.714 140 62 0 7 146 11 150 1.13e-53 171
MsG0580028561.01.T01 MTR_3g072860 84.810 79 12 0 46 124 62 140 5.15e-30 109
MsG0580028561.01.T01 MTR_7g108725 64.615 65 23 0 7 71 11 75 2.34e-25 95.9
MsG0580028561.01.T01 MTR_4g085040 64.615 65 23 0 9 73 13 77 7.54e-23 91.3
MsG0580028561.01.T01 MTR_4g085000 63.333 60 22 0 5 64 9 68 1.99e-21 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028561.01.T01 AT2G30260 69.492 236 66 3 1 234 1 232 1.64e-123 350
MsG0580028561.01.T01 AT1G06960 72.222 234 60 2 1 234 1 229 1.08e-120 343
MsG0580028561.01.T01 AT1G06960 69.849 199 55 2 36 234 7 200 2.58e-95 277
MsG0580028561.01.T01 AT2G47580 56.485 239 94 3 5 234 13 250 1.81e-87 259
MsG0580028561.01.T01 AT2G30260 71.631 141 35 1 1 141 1 136 7.03e-72 216
MsG0580028561.01.T01 AT1G06960 78.195 133 29 0 1 133 1 133 2.42e-70 213
MsG0580028561.01.T01 AT1G06960 82.524 103 18 0 1 103 1 103 9.05e-63 192
MsG0580028561.01.T01 AT1G06960 65.789 152 47 2 83 234 4 150 7.23e-61 188
MsG0580028561.01.T01 AT1G06960 75.510 98 24 0 36 133 7 104 5.08e-45 147

Find 66 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCAATATGGAAGGATTT+TGG 0.143011 5:-82370987 MsG0580028561.01.T01:CDS
GCAAAATTTGCTTTGAATAT+TGG 0.195857 5:+82367426 None:intergenic
ATTGAGATTCTTAATGTAAA+TGG 0.200962 5:+82373011 None:intergenic
CATCTGTCGCACTGCATTAC+TGG 0.268948 5:+82370895 None:intergenic
TGCAGAAGTTGTAAGTTTAC+AGG 0.291868 5:-82367369 MsG0580028561.01.T01:three_prime_UTR
TATTGCTTATTCTCTCAATA+TGG 0.294966 5:-82370998 MsG0580028561.01.T01:CDS
AAACCAGAGAGGATGCTTTC+AGG 0.319590 5:-82373054 MsG0580028561.01.T01:exon
TTAATGTAAATGGTTTGATT+TGG 0.322185 5:+82373021 None:intergenic
CTTAGCAAAGTTTATAATCA+TGG 0.324640 5:+82367473 None:intergenic
TGAAAGCATCCTCTCTGGTT+TGG 0.356331 5:+82373056 None:intergenic
GCCTCTTGGGCACCGGACCC+TGG 0.364979 5:+82367708 None:intergenic
CTCTATGAACAAAATATTGT+TGG 0.365120 5:+82367677 None:intergenic
TGTTGGGAGCAGCTGCCTCT+TGG 0.368601 5:+82367694 None:intergenic
GTTGGGAGCAGCTGCCTCTT+GGG 0.371933 5:+82367695 None:intergenic
GCACCATGTGTTCCACCATT+AGG 0.384777 5:+82368243 None:intergenic
CCTCTCTGGTTTGGTTCTGA+TGG 0.397079 5:+82373065 None:intergenic
GCCTCATTCCGTCCAGGGTC+CGG 0.398715 5:-82367720 MsG0580028561.01.T01:CDS
ATGTAAATGGTTTGATTTGG+AGG 0.406769 5:+82373024 None:intergenic
AAACAATCTTCTGTGCCTAA+TGG 0.424244 5:-82368258 MsG0580028561.01.T01:CDS
TCTCAGTTACTTTGTAAACT+AGG 0.426990 5:-82367219 MsG0580028561.01.T01:three_prime_UTR
TGAGAAATCTATCACATTTG+TGG 0.431750 5:-82367321 MsG0580028561.01.T01:three_prime_UTR
AACCAGAGAGGATGCTTTCA+GGG 0.433914 5:-82373053 MsG0580028561.01.T01:exon
AGCAGCTGCCTCTTGGGCAC+CGG 0.444275 5:+82367701 None:intergenic
ACAATCATCCATGGCAATGC+AGG 0.453318 5:-82367529 MsG0580028561.01.T01:CDS
TCTATGAACAAAATATTGTT+GGG 0.458630 5:+82367678 None:intergenic
GACGCCTAAGCTTCGAGGAC+AGG 0.460104 5:-82370948 MsG0580028561.01.T01:CDS
AGAGGGAAGCTTTGTTCCAA+GGG 0.460175 5:-82370298 MsG0580028561.01.T01:CDS
CGCTTGATCGAAGCAAAGCC+AGG 0.463784 5:-82367582 MsG0580028561.01.T01:CDS
GAGAAATCTATCACATTTGT+GGG 0.464095 5:-82367320 MsG0580028561.01.T01:three_prime_UTR
TTAGCAAAGTTTATAATCAT+GGG 0.465775 5:+82367474 None:intergenic
CATGCCTGTCCTCGAAGCTT+AGG 0.475388 5:+82370944 None:intergenic
TCCCCTGAAAGCATCCTCTC+TGG 0.487029 5:+82373051 None:intergenic
ACCGGACCCTGGACGGAATG+AGG 0.501996 5:+82367719 None:intergenic
AAGCGCACTTCCTTAAAACC+TGG 0.502688 5:+82367600 None:intergenic
CAGCAGGCCTCATTCCGTCC+AGG 0.503368 5:-82367726 MsG0580028561.01.T01:CDS
CTAAAGACGCCTAAGCTTCG+AGG 0.510089 5:-82370953 MsG0580028561.01.T01:CDS
AAGAGGGAAGCTTTGTTCCA+AGG 0.510421 5:-82370299 MsG0580028561.01.T01:CDS
ATCCTGCCGGTAGTTTCATA+AGG 0.510992 5:+82367648 None:intergenic
CTTGGGCACCGGACCCTGGA+CGG 0.524347 5:+82367712 None:intergenic
GCTTATTCTCTCAATATGGA+AGG 0.527328 5:-82370994 MsG0580028561.01.T01:CDS
AAATCTACAAATGCGATACC+TGG 0.531054 5:+82367564 None:intergenic
TCCAGGGTCCGGTGCCCAAG+AGG 0.546064 5:-82367709 MsG0580028561.01.T01:CDS
CATTGACCTAGACAATGCTA+TGG 0.547222 5:-82367170 MsG0580028561.01.T01:three_prime_UTR
TGATGTCGATTGATTGTATG+TGG 0.551512 5:-82367272 MsG0580028561.01.T01:three_prime_UTR
AGCAGGCCTCATTCCGTCCA+GGG 0.559600 5:-82367725 MsG0580028561.01.T01:CDS
CAATCTTCTGTGCCTAATGG+TGG 0.560473 5:-82368255 MsG0580028561.01.T01:CDS
TGCCTTATGAAACTACCGGC+AGG 0.562261 5:-82367650 MsG0580028561.01.T01:CDS
ATGGCAATGCAGGCTCTACA+AGG 0.563519 5:-82367519 MsG0580028561.01.T01:CDS
TAAGCTTCGAGGACAGGCAT+GGG 0.574433 5:-82370942 MsG0580028561.01.T01:CDS
CTAAGCTTCGAGGACAGGCA+TGG 0.581122 5:-82370943 MsG0580028561.01.T01:CDS
GATTGTATTGCTAAAGAAGA+GGG 0.592319 5:-82370315 MsG0580028561.01.T01:CDS
GAGCATTTCGAGCATCCTGC+CGG 0.593424 5:+82367635 None:intergenic
TTGTAGAGCCTGCATTGCCA+TGG 0.596181 5:+82367521 None:intergenic
GGAAGTTAGATTAAAGTAGA+CGG 0.596942 5:-82367348 MsG0580028561.01.T01:three_prime_UTR
AGCGCACTTCCTTAAAACCT+GGG 0.597463 5:+82367601 None:intergenic
GTGCCTAATGGTGGAACACA+TGG 0.600600 5:-82368246 MsG0580028561.01.T01:CDS
ATGCTCTTCGAACAATACCC+AGG 0.603681 5:-82367618 MsG0580028561.01.T01:CDS
GGGAAGATTGAGATAGTGCT+TGG 0.619587 5:-82367300 MsG0580028561.01.T01:three_prime_UTR
AGATGAGGCACAATCATCCA+TGG 0.621792 5:-82367538 MsG0580028561.01.T01:CDS
AATTTGCCTTATGAAACTAC+CGG 0.623907 5:-82367654 MsG0580028561.01.T01:CDS
AATGAAAAGATCAAGAAAGA+CGG 0.624809 5:-82372991 MsG0580028561.01.T01:intron
GGAACACATGGTGCAAGTAA+TGG 0.626001 5:-82368234 MsG0580028561.01.T01:CDS
AGATTGTATTGCTAAAGAAG+AGG 0.631624 5:-82370316 MsG0580028561.01.T01:CDS
ACCAGAGAGGATGCTTTCAG+GGG 0.636302 5:-82373052 MsG0580028561.01.T01:exon
CCATCAGAACCAAACCAGAG+AGG 0.711349 5:-82373065 MsG0580028561.01.T01:five_prime_UTR
ACACATGGTGCAAGTAATGG+TGG 0.721642 5:-82368231 MsG0580028561.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGTAAATATTTATACATA+AGG + Chr5:82368462-82368481 None:intergenic 10.0%
!!! AATTTTTTGTTGAATTATTA+GGG - Chr5:82367436-82367455 MsG0580028561.01.T01:three_prime_UTR 10.0%
!!! TGTATATACTTTATATTTTA+AGG - Chr5:82371434-82371453 MsG0580028561.01.T01:intron 10.0%
!! AAATAATAATTCAAAAAGTG+AGG + Chr5:82370033-82370052 None:intergenic 15.0%
!! AAATTAATGTTTAGTACAAA+AGG + Chr5:82370701-82370720 None:intergenic 15.0%
!! CAAAAATGATAGAAAATATT+AGG - Chr5:82370180-82370199 MsG0580028561.01.T01:intron 15.0%
!! TAAAAAGTTAATGAAAATTG+TGG - Chr5:82368061-82368080 MsG0580028561.01.T01:intron 15.0%
!! TAATAATCAACATAGATTAA+AGG + Chr5:82372044-82372063 None:intergenic 15.0%
!!! AAAATTTAGTTTAATTGAAC+TGG - Chr5:82367538-82367557 MsG0580028561.01.T01:CDS 15.0%
!!! AAATTTAGTTTAATTGAACT+GGG - Chr5:82367539-82367558 MsG0580028561.01.T01:CDS 15.0%
!!! CACTTTTTGAATTATTATTT+GGG - Chr5:82370033-82370052 MsG0580028561.01.T01:intron 15.0%
!!! CTAATATTTTCTATCATTTT+TGG + Chr5:82370182-82370201 None:intergenic 15.0%
!!! GAATTTTTTGTTGAATTATT+AGG - Chr5:82367435-82367454 MsG0580028561.01.T01:three_prime_UTR 15.0%
!!! TCACTTTTTGAATTATTATT+TGG - Chr5:82370032-82370051 MsG0580028561.01.T01:intron 15.0%
!!! TTACTTTTTACTACTTTTTT+AGG - Chr5:82367324-82367343 MsG0580028561.01.T01:three_prime_UTR 15.0%
!! ATAAATCATGTACACAAAAT+AGG + Chr5:82371335-82371354 None:intergenic 20.0%
!! ATACAAGTCCAATATATATA+TGG + Chr5:82369040-82369059 None:intergenic 20.0%
!! ATATAACAGATCCTATATAT+AGG - Chr5:82368272-82368291 MsG0580028561.01.T01:CDS 20.0%
!! ATATATATATTGGACTTGTA+TGG - Chr5:82369039-82369058 MsG0580028561.01.T01:intron 20.0%
!! ATATATCATTGTCATATGTA+CGG - Chr5:82368498-82368517 MsG0580028561.01.T01:intron 20.0%
!! ATTGAGATTCTTAATGTAAA+TGG + Chr5:82367227-82367246 None:intergenic 20.0%
!! ATTTAACAAAATTAGAGAAG+AGG + Chr5:82370888-82370907 None:intergenic 20.0%
!! CATATTATAACAACATAGAT+TGG - Chr5:82371607-82371626 MsG0580028561.01.T01:intron 20.0%
!! TAATATAACCAACAATAGAT+TGG + Chr5:82367887-82367906 None:intergenic 20.0%
!! TACAAGTCCAATATATATAT+GGG + Chr5:82369039-82369058 None:intergenic 20.0%
!! TAGAAAAGTAAGAAAAACAT+GGG + Chr5:82367296-82367315 None:intergenic 20.0%
!! TATAACAGATCCTATATATA+GGG - Chr5:82368273-82368292 MsG0580028561.01.T01:CDS 20.0%
!! TCTATGAACAAAATATTGTT+GGG + Chr5:82372560-82372579 None:intergenic 20.0%
!! TGTATTACAAAATTCAATGT+TGG - Chr5:82368413-82368432 MsG0580028561.01.T01:intron 20.0%
!! TGTTAAACGTTGTTAAATAA+CGG - Chr5:82372120-82372139 MsG0580028561.01.T01:intron 20.0%
!! TTAATGTAAATGGTTTGATT+TGG + Chr5:82367217-82367236 None:intergenic 20.0%
!! TTAGCAAAGTTTATAATCAT+GGG + Chr5:82372764-82372783 None:intergenic 20.0%
!!! AATAAGAACCTTTAATTTGA+TGG - Chr5:82368097-82368116 MsG0580028561.01.T01:intron 20.0%
!!! ATATTATGTTTAGCTTTCTT+TGG - Chr5:82369684-82369703 MsG0580028561.01.T01:intron 20.0%
!!! ATCATTGTATAACTTTTTAC+CGG + Chr5:82368310-82368329 None:intergenic 20.0%
!!! ATTCATTTTATTTTGCAATG+TGG - Chr5:82371219-82371238 MsG0580028561.01.T01:intron 20.0%
!!! CTTTATATTTTAAGGATCTT+AGG - Chr5:82371442-82371461 MsG0580028561.01.T01:intron 20.0%
!!! TATGGTTAGAAATTTTAACT+GGG - Chr5:82367409-82367428 MsG0580028561.01.T01:three_prime_UTR 20.0%
!!! TTATGGTTAGAAATTTTAAC+TGG - Chr5:82367408-82367427 MsG0580028561.01.T01:three_prime_UTR 20.0%
!!! TTCTCTAATTTTGTTAAATG+TGG - Chr5:82370889-82370908 MsG0580028561.01.T01:CDS 20.0%
! AAAAATAAGCCAATCCAAAT+GGG - Chr5:82367767-82367786 MsG0580028561.01.T01:intron 25.0%
! AAACTCCATCATTCAAATTA+GGG - Chr5:82371724-82371743 MsG0580028561.01.T01:intron 25.0%
! AATGAAAAGATCAAGAAAGA+CGG - Chr5:82367244-82367263 MsG0580028561.01.T01:three_prime_UTR 25.0%
! ACAAGTCCAATATATATATG+GGG + Chr5:82369038-82369057 None:intergenic 25.0%
! AGTATATCAGTGTAATACAT+GGG - Chr5:82368352-82368371 MsG0580028561.01.T01:intron 25.0%
! ATAATCCCTAATTTGAATGA+TGG + Chr5:82371732-82371751 None:intergenic 25.0%
! ATATAACAGATCCTATATGT+AGG - Chr5:82368328-82368347 MsG0580028561.01.T01:intron 25.0%
! ATATGTTTCAATTTAACTCG+TGG - Chr5:82372403-82372422 MsG0580028561.01.T01:intron 25.0%
! ATTGAGAGTAATATAAGAAG+AGG - Chr5:82370357-82370376 MsG0580028561.01.T01:intron 25.0%
! CAATTCAACCATCAAATTAA+AGG + Chr5:82368108-82368127 None:intergenic 25.0%
! CAATTCACAACACTAAAATT+GGG - Chr5:82372305-82372324 MsG0580028561.01.T01:intron 25.0%
! CAGTATAACTTTAATACCAT+AGG + Chr5:82369390-82369409 None:intergenic 25.0%
! CTCTATGAACAAAATATTGT+TGG + Chr5:82372561-82372580 None:intergenic 25.0%
! CTTAGCAAAGTTTATAATCA+TGG + Chr5:82372765-82372784 None:intergenic 25.0%
! GAATTCTTGGTTAAACATTA+TGG - Chr5:82369584-82369603 MsG0580028561.01.T01:intron 25.0%
! GGTTGAATTGATGAAATTAA+GGG - Chr5:82368118-82368137 MsG0580028561.01.T01:intron 25.0%
! GTACACAAATTAACAGATAT+AGG + Chr5:82369413-82369432 None:intergenic 25.0%
! GTAGAAAAGTAAGAAAAACA+TGG + Chr5:82367297-82367316 None:intergenic 25.0%
! TAAACTCCATCATTCAAATT+AGG - Chr5:82371723-82371742 MsG0580028561.01.T01:intron 25.0%
! TAATTTCTCTTAATGTCCAT+TGG - Chr5:82369515-82369534 MsG0580028561.01.T01:intron 25.0%
! TACAAAATTCAATGTTGGAT+GGG - Chr5:82368418-82368437 MsG0580028561.01.T01:intron 25.0%
! TACGTAATATTGTGAAATAG+CGG - Chr5:82372217-82372236 MsG0580028561.01.T01:intron 25.0%
! TATAACAGATCCTATATGTA+GGG - Chr5:82368329-82368348 MsG0580028561.01.T01:intron 25.0%
! TATAGATACTCCCTATATAT+AGG + Chr5:82368286-82368305 None:intergenic 25.0%
! TATATCATTGTCATATGTAC+GGG - Chr5:82368499-82368518 MsG0580028561.01.T01:intron 25.0%
! TATTAGAGAAACTATCAAGA+AGG - Chr5:82368800-82368819 MsG0580028561.01.T01:intron 25.0%
! TATTATTCATAAGCTTGTCA+AGG - Chr5:82367636-82367655 MsG0580028561.01.T01:CDS 25.0%
! TATTGCTTATTCTCTCAATA+TGG - Chr5:82369237-82369256 MsG0580028561.01.T01:intron 25.0%
! TGGTTGAATTGATGAAATTA+AGG - Chr5:82368117-82368136 MsG0580028561.01.T01:intron 25.0%
! TTACAAAATTCAATGTTGGA+TGG - Chr5:82368417-82368436 MsG0580028561.01.T01:intron 25.0%
! TTCTAATGAATGACTAGTAT+TGG + Chr5:82370159-82370178 None:intergenic 25.0%
! TTGAGAGTAATATAAGAAGA+GGG - Chr5:82370358-82370377 MsG0580028561.01.T01:intron 25.0%
!! ACCATAGGTTTTTCATAAAA+TGG + Chr5:82369375-82369394 None:intergenic 25.0%
!! ATCATTGCATAACTTTTTAC+CGG + Chr5:82368254-82368273 None:intergenic 25.0%
!! CCATAGGTTTTTCATAAAAT+GGG + Chr5:82369374-82369393 None:intergenic 25.0%
!! CGTTAGTTTCTTTATTGAAT+TGG - Chr5:82371878-82371897 MsG0580028561.01.T01:intron 25.0%
!! GCAAAATTTGCTTTGAATAT+TGG + Chr5:82372812-82372831 None:intergenic 25.0%
!! GTTTCTCTAATAGTTTTTGT+AGG + Chr5:82368792-82368811 None:intergenic 25.0%
!! TTATAATCATGGGATTTTGA+GGG + Chr5:82372754-82372773 None:intergenic 25.0%
!! TTCTTATGCTGAATGTTTTT+AGG - Chr5:82367503-82367522 MsG0580028561.01.T01:CDS 25.0%
!! TTGAATTATTAGGGTAGTTT+TGG - Chr5:82367445-82367464 MsG0580028561.01.T01:three_prime_UTR 25.0%
!! TTTATAATCATGGGATTTTG+AGG + Chr5:82372755-82372774 None:intergenic 25.0%
!! TTTCTACCATCTTTTCTAAT+AGG + Chr5:82368669-82368688 None:intergenic 25.0%
!!! ACTACTTTTTTAGGTTACAA+CGG - Chr5:82367333-82367352 MsG0580028561.01.T01:three_prime_UTR 25.0%
!!! ATTTGTAGATTTTGAAGATG+AGG - Chr5:82372682-82372701 MsG0580028561.01.T01:intron 25.0%
!!! CTTGTTTTTGTATGAAGTTA+CGG - Chr5:82369798-82369817 MsG0580028561.01.T01:intron 25.0%
!!! TCGTTGAATAACTTTTTTAC+TGG - Chr5:82368385-82368404 MsG0580028561.01.T01:intron 25.0%
!!! TTGTTTTTGTATGAAGTTAC+GGG - Chr5:82369799-82369818 MsG0580028561.01.T01:intron 25.0%
!!! TTTGAAATCTTTTGTCATGT+TGG - Chr5:82369707-82369726 MsG0580028561.01.T01:intron 25.0%
!!! TTTTAGAAGCATATCATTGA+TGG + Chr5:82369847-82369866 None:intergenic 25.0%
AAAAAGAAACAAGAGGAGAA+AGG - Chr5:82369965-82369984 MsG0580028561.01.T01:intron 30.0%
AAAACGTGATAAAACACAAC+AGG + Chr5:82369448-82369467 None:intergenic 30.0%
AAATGTACTCTTATATCAGC+AGG - Chr5:82372493-82372512 MsG0580028561.01.T01:intron 30.0%
AACTTGCAAACAAAGACTAA+AGG + Chr5:82370220-82370239 None:intergenic 30.0%
AAGAATGAGAATGAAAGATG+TGG - Chr5:82369746-82369765 MsG0580028561.01.T01:intron 30.0%
AATTTGCCTTATGAAACTAC+CGG - Chr5:82372581-82372600 MsG0580028561.01.T01:intron 30.0%
AGATTGTATTGCTAAAGAAG+AGG - Chr5:82369919-82369938 MsG0580028561.01.T01:intron 30.0%
AGTAATATAAGAAGAGGGAA+AGG - Chr5:82370363-82370382 MsG0580028561.01.T01:intron 30.0%
ATATTGTGAAATAGCGGTTA+TGG - Chr5:82372223-82372242 MsG0580028561.01.T01:intron 30.0%
ATTGTGTCTCATATATTGCT+TGG - Chr5:82370628-82370647 MsG0580028561.01.T01:intron 30.0%
CAAAAATAAGCCAATCCAAA+TGG - Chr5:82367766-82367785 MsG0580028561.01.T01:intron 30.0%
CGAAAATAAGTCAATCCAAA+CGG + Chr5:82367588-82367607 None:intergenic 30.0%
GAAAAACATGGGAATGTAAA+TGG + Chr5:82367285-82367304 None:intergenic 30.0%
GAAATGACAACATTAGAGAA+AGG - Chr5:82368633-82368652 MsG0580028561.01.T01:intron 30.0%
GAGAAATCTATCACATTTGT+GGG - Chr5:82372915-82372934 MsG0580028561.01.T01:intron 30.0%
GAGTATATCAGTGTAATACA+TGG - Chr5:82368351-82368370 MsG0580028561.01.T01:intron 30.0%
GATTGTATTGCTAAAGAAGA+GGG - Chr5:82369920-82369939 MsG0580028561.01.T01:intron 30.0%
GCAATTCACAACACTAAAAT+TGG - Chr5:82372304-82372323 MsG0580028561.01.T01:intron 30.0%
GCGTATTATGTATGAGAAAA+GGG - Chr5:82367789-82367808 MsG0580028561.01.T01:intron 30.0%
GGAAGTTAGATTAAAGTAGA+CGG - Chr5:82372887-82372906 MsG0580028561.01.T01:intron 30.0%
TAAAAACCATAGCATTGTCT+AGG + Chr5:82373074-82373093 None:intergenic 30.0%
TAACCAAGAATTCTTACAAG+CGG + Chr5:82369577-82369596 None:intergenic 30.0%
TCAAAAAGTGAGGATGATTA+TGG + Chr5:82370023-82370042 None:intergenic 30.0%
TCTCTACTCAACAAATTATG+AGG + Chr5:82370843-82370862 None:intergenic 30.0%
TGAGAAATCTATCACATTTG+TGG - Chr5:82372914-82372933 MsG0580028561.01.T01:intron 30.0%
TTAATCTTGACGTATGATAG+AGG - Chr5:82369005-82369024 MsG0580028561.01.T01:intron 30.0%
TTACGTACTAAATAGCGTAT+CGG + Chr5:82372204-82372223 None:intergenic 30.0%
TTCAGAGGGATAAATGATAA+TGG + Chr5:82370078-82370097 None:intergenic 30.0%
TTGAATTGCCAATCTATTGT+TGG - Chr5:82367876-82367895 MsG0580028561.01.T01:intron 30.0%
TTTGCAAGTTAGGAGATAAA+GGG - Chr5:82370230-82370249 MsG0580028561.01.T01:intron 30.0%
! AATAGCAGTTTGTTCAAACT+CGG + Chr5:82372273-82372292 None:intergenic 30.0%
! CAAAATTAGAGAAGAGGTAT+AGG + Chr5:82370882-82370901 None:intergenic 30.0%
! CATAACTTTTTACCGGATAT+AGG + Chr5:82368247-82368266 None:intergenic 30.0%
! CCCATTTTATGAAAAACCTA+TGG - Chr5:82369371-82369390 MsG0580028561.01.T01:intron 30.0%
! TATAATCATGGGATTTTGAG+GGG + Chr5:82372753-82372772 None:intergenic 30.0%
! TCTCAGTTACTTTGTAAACT+AGG - Chr5:82373016-82373035 MsG0580028561.01.T01:CDS 30.0%
! TTAGTCTTTGTTTGCAAGTT+AGG - Chr5:82370220-82370239 MsG0580028561.01.T01:intron 30.0%
! TTGCTCTTGATTTTCCATTT+CGG - Chr5:82369065-82369084 MsG0580028561.01.T01:intron 30.0%
! TTTTGAGCTAACCTATCATT+AGG - Chr5:82370923-82370942 MsG0580028561.01.T01:CDS 30.0%
!! ATATAGGGAGTATCTATATC+CGG - Chr5:82368288-82368307 MsG0580028561.01.T01:CDS 30.0%
!! ATGTAAATGGTTTGATTTGG+AGG + Chr5:82367214-82367233 None:intergenic 30.0%
!! TGGGGTTTATTTTTCTTCAT+AGG + Chr5:82370475-82370494 None:intergenic 30.0%
!! TGTTTTTGTATGAAGTTACG+GGG - Chr5:82369800-82369819 MsG0580028561.01.T01:intron 30.0%
!! TTATTTTATGAAGTCTCGCA+TGG - Chr5:82368035-82368054 MsG0580028561.01.T01:intron 30.0%
!! TTGGTTCTGATTGGTTTATT+TGG - Chr5:82371048-82371067 MsG0580028561.01.T01:intron 30.0%
!!! GTAATTGGATTTTGTTTTGC+TGG - Chr5:82369097-82369116 MsG0580028561.01.T01:intron 30.0%
AAACAATCTTCTGTGCCTAA+TGG - Chr5:82371977-82371996 MsG0580028561.01.T01:intron 35.0%
AAACTAGACTTAGGTGGTTT+GGG - Chr5:82368686-82368705 MsG0580028561.01.T01:intron 35.0%
AAATCCAGTGATGGTAGTTA+AGG + Chr5:82371098-82371117 None:intergenic 35.0%
AAATCTACAAATGCGATACC+TGG + Chr5:82372674-82372693 None:intergenic 35.0%
AACACTAAAATTGGGTCATC+GGG - Chr5:82372313-82372332 MsG0580028561.01.T01:intron 35.0%
AAGGAAGAAGGAAAGAGAAA+TGG + Chr5:82371763-82371782 None:intergenic 35.0%
ACAAGATCAGAAAGTGATGA+TGG + Chr5:82371844-82371863 None:intergenic 35.0%
ACAGAATTCATGATGTCCAA+TGG + Chr5:82369534-82369553 None:intergenic 35.0%
ACAGCTTAACAGTTTATGTC+TGG + Chr5:82371417-82371436 None:intergenic 35.0%
ACATGAATTGAGAGAAGACT+TGG + Chr5:82370423-82370442 None:intergenic 35.0%
ACTACAAAATCCCCCATATT+TGG + Chr5:82371692-82371711 None:intergenic 35.0%
AGATGGTAGAAACTAGACTT+AGG - Chr5:82368677-82368696 MsG0580028561.01.T01:intron 35.0%
AGTATCCGTATAACAGAACA+GGG + Chr5:82371145-82371164 None:intergenic 35.0%
AGTCAAATCACTAGAGGTAA+GGG - Chr5:82368762-82368781 MsG0580028561.01.T01:intron 35.0%
AGTTAGGAGAGTAGATTAGT+GGG - Chr5:82368738-82368757 MsG0580028561.01.T01:intron 35.0%
ATAAGAAGAGGGAAAGGATA+TGG - Chr5:82370369-82370388 MsG0580028561.01.T01:intron 35.0%
ATTACGTTGCTTGAGAGTTA+TGG - Chr5:82367391-82367410 MsG0580028561.01.T01:three_prime_UTR 35.0%
CAACACTAAAATTGGGTCAT+CGG - Chr5:82372312-82372331 MsG0580028561.01.T01:intron 35.0%
CAAGATCAGAAAGTGATGAT+GGG + Chr5:82371843-82371862 None:intergenic 35.0%
CTAACTCCCAAAAAAACCTT+CGG - Chr5:82370533-82370552 MsG0580028561.01.T01:intron 35.0%
CTACAAAATCCCCCATATTT+GGG + Chr5:82371691-82371710 None:intergenic 35.0%
CTGATATACTCCCTACATAT+AGG + Chr5:82368342-82368361 None:intergenic 35.0%
GAACTCAAGAAATGTATTGG+AGG + Chr5:82371667-82371686 None:intergenic 35.0%
GAGGATGATTATGGTTTGAA+AGG + Chr5:82370014-82370033 None:intergenic 35.0%
GCTTATTCTCTCAATATGGA+AGG - Chr5:82369241-82369260 MsG0580028561.01.T01:intron 35.0%
GGAGAAGAAAAAGAAACAAG+AGG - Chr5:82369958-82369977 MsG0580028561.01.T01:intron 35.0%
GGATCTAGATATCAATGAGT+TGG - Chr5:82368821-82368840 MsG0580028561.01.T01:intron 35.0%
GGCGTATTATGTATGAGAAA+AGG - Chr5:82367788-82367807 MsG0580028561.01.T01:intron 35.0%
GTAAACTCTATGCAATCTAG+AGG + Chr5:82372097-82372116 None:intergenic 35.0%
GTAGCACCTATTAGAAAAGA+TGG - Chr5:82368660-82368679 MsG0580028561.01.T01:intron 35.0%
GTTCAACTGAACCATATTTC+TGG - Chr5:82371024-82371043 MsG0580028561.01.T01:intron 35.0%
GTTTGCAAGTTAGGAGATAA+AGG - Chr5:82370229-82370248 MsG0580028561.01.T01:intron 35.0%
GTTTGTTTGGGAGTTAAAGA+GGG + Chr5:82371806-82371825 None:intergenic 35.0%
TACAAAATCCCCCATATTTG+GGG + Chr5:82371690-82371709 None:intergenic 35.0%
TACGTACTAAATAGCGTATC+GGG + Chr5:82372203-82372222 None:intergenic 35.0%
TAGTATCCGTATAACAGAAC+AGG + Chr5:82371146-82371165 None:intergenic 35.0%
TAGTTAGGAGAGTAGATTAG+TGG - Chr5:82368737-82368756 MsG0580028561.01.T01:intron 35.0%
TCAGAACCAAACCAGAAATA+TGG + Chr5:82371038-82371057 None:intergenic 35.0%
TCATACATAATACGCCCATT+TGG + Chr5:82367784-82367803 None:intergenic 35.0%
TCTAAAAACACACCCAAACA+AGG + Chr5:82370295-82370314 None:intergenic 35.0%
TCTTACAAGCGGCTATATTT+GGG + Chr5:82369566-82369585 None:intergenic 35.0%
TGATACAGGTATCCTATATC+CGG - Chr5:82368232-82368251 MsG0580028561.01.T01:CDS 35.0%
TGCAGAAGTTGTAAGTTTAC+AGG - Chr5:82372866-82372885 MsG0580028561.01.T01:intron 35.0%
TTCTTACAAGCGGCTATATT+TGG + Chr5:82369567-82369586 None:intergenic 35.0%
TTTGTTTGGGAGTTAAAGAG+GGG + Chr5:82371805-82371824 None:intergenic 35.0%
! AATGTATTGGAGGAAGCTTT+TGG + Chr5:82371657-82371676 None:intergenic 35.0%
! ACTGAGCAGAATTAGTTCTT+TGG + Chr5:82370976-82370995 None:intergenic 35.0%
! ATAGGTTAGCTCAAAAAGCT+TGG + Chr5:82370919-82370938 None:intergenic 35.0%
! CTCTCAATATGGAAGGATTT+TGG - Chr5:82369248-82369267 MsG0580028561.01.T01:intron 35.0%
! GAGAAGACTTGGAAATGTTT+TGG + Chr5:82370412-82370431 None:intergenic 35.0%
! GCAAATTTTGCGTACTGTAT+TGG - Chr5:82372821-82372840 MsG0580028561.01.T01:intron 35.0%
! GCATACTTAAGGGTTTGTTT+GGG + Chr5:82371818-82371837 None:intergenic 35.0%
! TATCATTTATCCCTCTGAAG+TGG - Chr5:82370079-82370098 MsG0580028561.01.T01:intron 35.0%
! TGATGTCGATTGATTGTATG+TGG - Chr5:82372963-82372982 MsG0580028561.01.T01:intron 35.0%
! TGCTCTTGATTTTCCATTTC+GGG - Chr5:82369066-82369085 MsG0580028561.01.T01:intron 35.0%
! TGTTTCTTTTTCTTCTCCCT+TGG + Chr5:82369956-82369975 None:intergenic 35.0%
! TTGGAGAAAGACATGGTTTT+CGG - Chr5:82368840-82368859 MsG0580028561.01.T01:intron 35.0%
! TTTTTGCTGGAGAGAAAATC+AGG + Chr5:82372069-82372088 None:intergenic 35.0%
!! AACTGTGAGTTTTGTGATAC+AGG - Chr5:82368218-82368237 MsG0580028561.01.T01:intron 35.0%
!! ACTGAACCATATTTCTGGTT+TGG - Chr5:82371029-82371048 MsG0580028561.01.T01:intron 35.0%
!! ATTTCTGGTTTGGTTCTGAT+TGG - Chr5:82371039-82371058 MsG0580028561.01.T01:intron 35.0%
!! CCTAGTTTTCCATATTGTGT+GGG + Chr5:82371309-82371328 None:intergenic 35.0%
!! TGTTCTATTTGTTGTCGTTG+TGG - Chr5:82369194-82369213 MsG0580028561.01.T01:intron 35.0%
!!! AATGCATCCGAAGGTTTTTT+TGG + Chr5:82370543-82370562 None:intergenic 35.0%
!!! ATGCATCCGAAGGTTTTTTT+GGG + Chr5:82370542-82370561 None:intergenic 35.0%
!!! ATTTTGTTTTGCTGGTCTTG+GGG - Chr5:82369105-82369124 MsG0580028561.01.T01:intron 35.0%
!!! GATTTTGTTTTGCTGGTCTT+GGG - Chr5:82369104-82369123 MsG0580028561.01.T01:intron 35.0%
!!! GGTAGTTTTGGATTTGTGTT+AGG - Chr5:82367457-82367476 MsG0580028561.01.T01:exon 35.0%
!!! TTGTTTGGGTGTGTTTTTAG+AGG - Chr5:82370294-82370313 MsG0580028561.01.T01:CDS 35.0%
!!! TTTTAGGTTACAACGGTTCT+TGG - Chr5:82367340-82367359 MsG0580028561.01.T01:three_prime_UTR 35.0%
AACAGACATTACCACTTCAG+AGG + Chr5:82370093-82370112 None:intergenic 40.0%
AAGAGGAGAAAGGTGAAGAA+TGG - Chr5:82369975-82369994 MsG0580028561.01.T01:intron 40.0%
AATTAAGCGTAGCAGAGATG+AGG - Chr5:82368559-82368578 MsG0580028561.01.T01:intron 40.0%
ACAAAATCCCCCATATTTGG+GGG + Chr5:82371689-82371708 None:intergenic 40.0%
ACAGACATTACCACTTCAGA+GGG + Chr5:82370092-82370111 None:intergenic 40.0%
ACCAGAACAGACCTAATGAT+AGG + Chr5:82370937-82370956 None:intergenic 40.0%
ACCTATCATTAGGTCTGTTC+TGG - Chr5:82370933-82370952 MsG0580028561.01.T01:CDS 40.0%
ACGTACTAAATAGCGTATCG+GGG + Chr5:82372202-82372221 None:intergenic 40.0%
AGGATGTTGCATACTTGCAT+TGG - Chr5:82368579-82368598 MsG0580028561.01.T01:intron 40.0%
ATTACAATATCCCCCCGAAA+TGG + Chr5:82369082-82369101 None:intergenic 40.0%
CAATAGTAGTCAACATGTCG+CGG - Chr5:82371184-82371203 MsG0580028561.01.T01:intron 40.0%
CACTGTAAGATAACTTGAGC+AGG + Chr5:82369478-82369497 None:intergenic 40.0%
CAGTGATGGTAGTTAAGGTT+GGG + Chr5:82371093-82371112 None:intergenic 40.0%
CATAATACGCCCATTTGGAT+TGG + Chr5:82367779-82367798 None:intergenic 40.0%
CATTGACCTAGACAATGCTA+TGG - Chr5:82373065-82373084 MsG0580028561.01.T01:five_prime_UTR 40.0%
CCCACACAATATGGAAAACT+AGG - Chr5:82371306-82371325 MsG0580028561.01.T01:intron 40.0%
CGTCTGATATGCAACTAACT+TGG - Chr5:82370997-82371016 MsG0580028561.01.T01:CDS 40.0%
CTACCATCACTGGATTTCAT+TGG - Chr5:82371101-82371120 MsG0580028561.01.T01:intron 40.0%
CTCGGTCCCCATATATATAT+TGG - Chr5:82369029-82369048 MsG0580028561.01.T01:intron 40.0%
GAAAAATAAACCCCAACGCA+AGG - Chr5:82370480-82370499 MsG0580028561.01.T01:intron 40.0%
GAAACTAGACTTAGGTGGTT+TGG - Chr5:82368685-82368704 MsG0580028561.01.T01:intron 40.0%
GAGTCAAATCACTAGAGGTA+AGG - Chr5:82368761-82368780 MsG0580028561.01.T01:intron 40.0%
GGGGAACTCAAGAAATGTAT+TGG + Chr5:82371670-82371689 None:intergenic 40.0%
GTGAGTATGTGAGAAAGAGA+GGG - Chr5:82370797-82370816 MsG0580028561.01.T01:intron 40.0%
GTGTCTCATATATTGCTTGG+TGG - Chr5:82370631-82370650 MsG0580028561.01.T01:intron 40.0%
GTGTTGTGAATTGCAGATTG+TGG + Chr5:82372298-82372317 None:intergenic 40.0%
GTTAGGAGAGTAGATTAGTG+GGG - Chr5:82368739-82368758 MsG0580028561.01.T01:intron 40.0%
TAGCCGCTTGTAAGAATTCT+TGG - Chr5:82369571-82369590 MsG0580028561.01.T01:intron 40.0%
TAGGACTAAAACCCCCAATA+TGG + Chr5:82370456-82370475 None:intergenic 40.0%
TCGAAGAGTAACTTTGAGCA+GGG + Chr5:82368171-82368190 None:intergenic 40.0%
TCTGTACAGCTGAGAAAAAG+AGG - Chr5:82371939-82371958 MsG0580028561.01.T01:intron 40.0%
TCTTGAGTTCCCCCAAATAT+GGG - Chr5:82371677-82371696 MsG0580028561.01.T01:intron 40.0%
TGAACTGGGCATTTCTTAGT+TGG - Chr5:82367553-82367572 MsG0580028561.01.T01:CDS 40.0%
TGAGTATGTGAGAAAGAGAG+GGG - Chr5:82370798-82370817 MsG0580028561.01.T01:intron 40.0%
TGCTTAGGGTAAAAGGAAGA+AGG + Chr5:82371775-82371794 None:intergenic 40.0%
TGGTAGAAACTAGACTTAGG+TGG - Chr5:82368680-82368699 MsG0580028561.01.T01:intron 40.0%
TGTCATATGTACGGGACAAA+GGG - Chr5:82368507-82368526 MsG0580028561.01.T01:intron 40.0%
TGTGAGTATGTGAGAAAGAG+AGG - Chr5:82370796-82370815 MsG0580028561.01.T01:intron 40.0%
TTCTTGAGTTCCCCCAAATA+TGG - Chr5:82371676-82371695 MsG0580028561.01.T01:intron 40.0%
TTGACGTATGATAGAGGACT+CGG - Chr5:82369011-82369030 MsG0580028561.01.T01:intron 40.0%
TTGTCATATGTACGGGACAA+AGG - Chr5:82368506-82368525 MsG0580028561.01.T01:intron 40.0%
TTGTGAAATAGCGGTTATGG+AGG - Chr5:82372226-82372245 MsG0580028561.01.T01:intron 40.0%
TTTCGGGGGGATATTGTAAT+TGG - Chr5:82369082-82369101 MsG0580028561.01.T01:intron 40.0%
! AGTTTTCCATATTGTGTGGG+AGG + Chr5:82371306-82371325 None:intergenic 40.0%
! ATGATGGGAGGCATACTTAA+GGG + Chr5:82371828-82371847 None:intergenic 40.0%
! ATGTTCGAGTTCCTCCATAT+TGG - Chr5:82370439-82370458 MsG0580028561.01.T01:intron 40.0%
! CAATGAGTTGGAGAAAGACA+TGG - Chr5:82368833-82368852 MsG0580028561.01.T01:intron 40.0%
! CGAACAATACCCAGGTTTTA+AGG - Chr5:82372625-82372644 MsG0580028561.01.T01:intron 40.0%
! CTCTTGATTTTCCATTTCGG+GGG - Chr5:82369068-82369087 MsG0580028561.01.T01:intron 40.0%
! GCGACATGTTGACTACTATT+GGG + Chr5:82371185-82371204 None:intergenic 40.0%
! GCTCTTGATTTTCCATTTCG+GGG - Chr5:82369067-82369086 MsG0580028561.01.T01:intron 40.0%
! GGCATACTTAAGGGTTTGTT+TGG + Chr5:82371819-82371838 None:intergenic 40.0%
! GGTTTGTTTGGGAGTTAAAG+AGG + Chr5:82371807-82371826 None:intergenic 40.0%
! GTTTTCCATATTGTGTGGGA+GGG + Chr5:82371305-82371324 None:intergenic 40.0%
! TATTGGAGGAAGCTTTTGGA+GGG + Chr5:82371653-82371672 None:intergenic 40.0%
! TCTAGAGGCAAAGTTTTTGC+TGG + Chr5:82372082-82372101 None:intergenic 40.0%
! TCTTGATTTTCCATTTCGGG+GGG - Chr5:82369069-82369088 MsG0580028561.01.T01:intron 40.0%
! TGGGGGATTTTGTAGTATGA+AGG - Chr5:82371696-82371715 MsG0580028561.01.T01:intron 40.0%
! TGGTTTTCGGTAGAACACTA+TGG - Chr5:82368853-82368872 MsG0580028561.01.T01:intron 40.0%
! TGTTCGAGTTCCTCCATATT+GGG - Chr5:82370440-82370459 MsG0580028561.01.T01:intron 40.0%
!! GCCTAGTTTTCCATATTGTG+TGG + Chr5:82371310-82371329 None:intergenic 40.0%
!! TTTTGCGTACTGTATTGGTG+TGG - Chr5:82372826-82372845 MsG0580028561.01.T01:intron 40.0%
!!! ACATGGGGTGGATTTTTTCT+AGG + Chr5:82371281-82371300 None:intergenic 40.0%
!!! AGGTTTTTTTGGGAGTTAGG+TGG + Chr5:82370532-82370551 None:intergenic 40.0%
!!! CGAAGGTTTTTTTGGGAGTT+AGG + Chr5:82370535-82370554 None:intergenic 40.0%
!!! GGATTTTGTTTTGCTGGTCT+TGG - Chr5:82369103-82369122 MsG0580028561.01.T01:intron 40.0%
!!! TTTTGTTTTGCTGGTCTTGG+GGG - Chr5:82369106-82369125 MsG0580028561.01.T01:intron 40.0%
AAACCAGAGAGGATGCTTTC+AGG - Chr5:82367181-82367200 MsG0580028561.01.T01:three_prime_UTR 45.0%
AAAGGGAGGTGAGAGCTTTA+GGG - Chr5:82370247-82370266 MsG0580028561.01.T01:intron 45.0%
AAATAAACCCCAACGCAAGG+TGG - Chr5:82370483-82370502 MsG0580028561.01.T01:intron 45.0%
AACCAGAGAGGATGCTTTCA+GGG - Chr5:82367182-82367201 MsG0580028561.01.T01:three_prime_UTR 45.0%
AAGCGCACTTCCTTAAAACC+TGG + Chr5:82372638-82372657 None:intergenic 45.0%
AATAAACCCCAACGCAAGGT+GGG - Chr5:82370484-82370503 MsG0580028561.01.T01:intron 45.0%
ACAATCATCCATGGCAATGC+AGG - Chr5:82372706-82372725 MsG0580028561.01.T01:intron 45.0%
ACACATGGTGCAAGTAATGG+TGG - Chr5:82372004-82372023 MsG0580028561.01.T01:intron 45.0%
AGATGAGGCACAATCATCCA+TGG - Chr5:82372697-82372716 MsG0580028561.01.T01:intron 45.0%
AGCGCACTTCCTTAAAACCT+GGG + Chr5:82372637-82372656 None:intergenic 45.0%
AGTTGGACAATGTGTCCGTT+TGG - Chr5:82367570-82367589 MsG0580028561.01.T01:CDS 45.0%
ATATGTACGGGACAAAGGGT+TGG - Chr5:82368511-82368530 MsG0580028561.01.T01:intron 45.0%
ATATTGTGTGGGAGGGAACA+TGG + Chr5:82371298-82371317 None:intergenic 45.0%
ATCCTGCCGGTAGTTTCATA+AGG + Chr5:82372590-82372609 None:intergenic 45.0%
ATGCTCTTCGAACAATACCC+AGG - Chr5:82372617-82372636 MsG0580028561.01.T01:intron 45.0%
ATGTTCCCTCCCACACAATA+TGG - Chr5:82371297-82371316 MsG0580028561.01.T01:intron 45.0%
CAAACTCGGCTACACAACAA+TGG + Chr5:82372259-82372278 None:intergenic 45.0%
CAATCTTCTGTGCCTAATGG+TGG - Chr5:82371980-82371999 MsG0580028561.01.T01:intron 45.0%
CCAACCTTAACTACCATCAC+TGG - Chr5:82371091-82371110 MsG0580028561.01.T01:intron 45.0%
CCAGTGATGGTAGTTAAGGT+TGG + Chr5:82371094-82371113 None:intergenic 45.0%
CTCGAAGAGTAACTTTGAGC+AGG + Chr5:82368172-82368191 None:intergenic 45.0%
CTCTAGTTGCGAGTTTGTAG+TGG - Chr5:82371465-82371484 MsG0580028561.01.T01:intron 45.0%
CTTGAGTTCCCCCAAATATG+GGG - Chr5:82371678-82371697 MsG0580028561.01.T01:intron 45.0%
GACAACATTAGAGAAAGGCG+AGG - Chr5:82368638-82368657 MsG0580028561.01.T01:intron 45.0%
GACTAAAACCCCCAATATGG+AGG + Chr5:82370453-82370472 None:intergenic 45.0%
GATGTGTGGTAAGACTAGAC+TGG - Chr5:82368601-82368620 MsG0580028561.01.T01:intron 45.0%
GCAAGTTAGGAGATAAAGGG+AGG - Chr5:82370233-82370252 MsG0580028561.01.T01:intron 45.0%
GCATACTTGCATTGGATGTG+TGG - Chr5:82368587-82368606 MsG0580028561.01.T01:intron 45.0%
GGAACACATGGTGCAAGTAA+TGG - Chr5:82372001-82372020 MsG0580028561.01.T01:intron 45.0%
GGGAAGATTGAGATAGTGCT+TGG - Chr5:82372935-82372954 MsG0580028561.01.T01:intron 45.0%
TAAAGGGAGGTGAGAGCTTT+AGG - Chr5:82370246-82370265 MsG0580028561.01.T01:intron 45.0%
TAACGGCTACAGTAGTGCTA+TGG - Chr5:82372137-82372156 MsG0580028561.01.T01:intron 45.0%
TAGTTGCGAGTTTGTAGTGG+AGG - Chr5:82371468-82371487 MsG0580028561.01.T01:intron 45.0%
TATGTGAGAAAGAGAGGGGA+GGG - Chr5:82370802-82370821 MsG0580028561.01.T01:intron 45.0%
TATTGTGTGGGAGGGAACAT+GGG + Chr5:82371297-82371316 None:intergenic 45.0%
TTGAGTTCCCCCAAATATGG+GGG - Chr5:82371679-82371698 MsG0580028561.01.T01:intron 45.0%
! AGTTGCGAGTTTGTAGTGGA+GGG - Chr5:82371469-82371488 MsG0580028561.01.T01:intron 45.0%
! AGTTTGTAGTGGAGGGCTTT+GGG - Chr5:82371476-82371495 MsG0580028561.01.T01:intron 45.0%
! CGCGACATGTTGACTACTAT+TGG + Chr5:82371186-82371205 None:intergenic 45.0%
! GTATTGGAGGAAGCTTTTGG+AGG + Chr5:82371654-82371673 None:intergenic 45.0%
! GTTCGAGTTCCTCCATATTG+GGG - Chr5:82370441-82370460 MsG0580028561.01.T01:intron 45.0%
! TGTGTCTGAAATGCATCCGA+AGG + Chr5:82370552-82370571 None:intergenic 45.0%
! TTCGAGTTCCTCCATATTGG+GGG - Chr5:82370442-82370461 MsG0580028561.01.T01:intron 45.0%
!! AAGAGGGAAGCTTTGTTCCA+AGG - Chr5:82369936-82369955 MsG0580028561.01.T01:intron 45.0%
!! AGAGGGAAGCTTTGTTCCAA+GGG - Chr5:82369937-82369956 MsG0580028561.01.T01:intron 45.0%
!! AGGAGAGTGCTTAGGGTAAA+AGG + Chr5:82371782-82371801 None:intergenic 45.0%
!! GATCAGAAAGTGATGATGGG+AGG + Chr5:82371840-82371859 None:intergenic 45.0%
!! GATGATGGGAGGCATACTTA+AGG + Chr5:82371829-82371848 None:intergenic 45.0%
!! TGAAAGCATCCTCTCTGGTT+TGG + Chr5:82367182-82367201 None:intergenic 45.0%
!!! GGGGTGGATTTTTTCTAGGT+GGG + Chr5:82371277-82371296 None:intergenic 45.0%
!!! GGGTGGATTTTTTCTAGGTG+GGG + Chr5:82371276-82371295 None:intergenic 45.0%
!!! GGTGGATTTTTTCTAGGTGG+GGG + Chr5:82371275-82371294 None:intergenic 45.0%
!!! TGGGGTGGATTTTTTCTAGG+TGG + Chr5:82371278-82371297 None:intergenic 45.0%
!!! TTTTTTCTAGGTGGGGGATG+AGG + Chr5:82371269-82371288 None:intergenic 45.0%
AAACACACCCAAACAAGGCG+AGG + Chr5:82370290-82370309 None:intergenic 50.0%
ACCAGAGAGGATGCTTTCAG+GGG - Chr5:82367183-82367202 MsG0580028561.01.T01:three_prime_UTR 50.0%
ATAAACCCCAACGCAAGGTG+GGG - Chr5:82370485-82370504 MsG0580028561.01.T01:intron 50.0%
ATAGTTCCCCACCTTGCGTT+GGG + Chr5:82370494-82370513 None:intergenic 50.0%
ATGGCAATGCAGGCTCTACA+AGG - Chr5:82372716-82372735 MsG0580028561.01.T01:intron 50.0%
ATTGTGTGGGAGGGAACATG+GGG + Chr5:82371296-82371315 None:intergenic 50.0%
CATCTGTCGCACTGCATTAC+TGG + Chr5:82369343-82369362 None:intergenic 50.0%
CCATCAGAACCAAACCAGAG+AGG - Chr5:82367170-82367189 MsG0580028561.01.T01:three_prime_UTR 50.0%
CGGCCAATGAAATCCAGTGA+TGG + Chr5:82371107-82371126 None:intergenic 50.0%
CTAAAGACGCCTAAGCTTCG+AGG - Chr5:82369282-82369301 MsG0580028561.01.T01:intron 50.0%
GAGTTAGGTGGAGACAGGAA+AGG + Chr5:82370520-82370539 None:intergenic 50.0%
GCACCATGTGTTCCACCATT+AGG + Chr5:82371995-82372014 None:intergenic 50.0%
GCATGTAGAGAGAAGACCTG+GGG - Chr5:82368708-82368727 MsG0580028561.01.T01:intron 50.0%
GCTATGGCGCTATTGCATAG+CGG - Chr5:82372153-82372172 MsG0580028561.01.T01:intron 50.0%
GGCATGTAGAGAGAAGACCT+GGG - Chr5:82368707-82368726 MsG0580028561.01.T01:intron 50.0%
GTATGTGAGAAAGAGAGGGG+AGG - Chr5:82370801-82370820 MsG0580028561.01.T01:intron 50.0%
GTGGGGAGTCAAATCACTAG+AGG - Chr5:82368756-82368775 MsG0580028561.01.T01:intron 50.0%
GTTTGGGAGTTAAAGAGGGG+AGG + Chr5:82371802-82371821 None:intergenic 50.0%
TAAGCTTCGAGGACAGGCAT+GGG - Chr5:82369293-82369312 MsG0580028561.01.T01:intron 50.0%
TGCCTTATGAAACTACCGGC+AGG - Chr5:82372585-82372604 MsG0580028561.01.T01:intron 50.0%
TTAGAGGTGAGCAGTCGAGA+AGG - Chr5:82370310-82370329 MsG0580028561.01.T01:CDS 50.0%
TTGTAGAGCCTGCATTGCCA+TGG + Chr5:82372717-82372736 None:intergenic 50.0%
TTTGGGAGTTAGGTGGAGAC+AGG + Chr5:82370525-82370544 None:intergenic 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + Chr5:82368902-82368921 None:intergenic 50.0%
! CAAGCCTTATCCCACCAAGT+GGG + Chr5:82368903-82368922 None:intergenic 50.0%
! GAGTTTGTAGTGGAGGGCTT+TGG - Chr5:82371475-82371494 MsG0580028561.01.T01:intron 50.0%
! GTGCCTAATGGTGGAACACA+TGG - Chr5:82371989-82372008 MsG0580028561.01.T01:intron 50.0%
! GTTTGTAGTGGAGGGCTTTG+GGG - Chr5:82371477-82371496 MsG0580028561.01.T01:intron 50.0%
! TTTGTAGTGGAGGGCTTTGG+GGG - Chr5:82371478-82371497 MsG0580028561.01.T01:intron 50.0%
!! AGAGCTTTAGGGAGAGACGA+GGG - Chr5:82370258-82370277 MsG0580028561.01.T01:intron 50.0%
!! CCTCTCTGGTTTGGTTCTGA+TGG + Chr5:82367173-82367192 None:intergenic 50.0%
!! GGGAATACCTCGCCTTGTTT+GGG - Chr5:82370280-82370299 MsG0580028561.01.T01:CDS 50.0%
AAAGAGAGGGGAGGGAAGAG+GGG - Chr5:82370810-82370829 MsG0580028561.01.T01:intron 55.0%
AGAAAGAGAGGGGAGGGAAG+AGG - Chr5:82370808-82370827 MsG0580028561.01.T01:intron 55.0%
CATGCCTGTCCTCGAAGCTT+AGG + Chr5:82369294-82369313 None:intergenic 55.0%
CGCTTGATCGAAGCAAAGCC+AGG - Chr5:82372653-82372672 MsG0580028561.01.T01:intron 55.0%
CTAAGCTTCGAGGACAGGCA+TGG - Chr5:82369292-82369311 MsG0580028561.01.T01:intron 55.0%
CTCCTAACTACAGCATCCCC+AGG + Chr5:82368727-82368746 None:intergenic 55.0%
CTTATCCCACCAAGTGGGGT+CGG + Chr5:82368898-82368917 None:intergenic 55.0%
GAAAGAGAGGGGAGGGAAGA+GGG - Chr5:82370809-82370828 MsG0580028561.01.T01:intron 55.0%
GACCTGGGGATGCTGTAGTT+AGG - Chr5:82368722-82368741 MsG0580028561.01.T01:intron 55.0%
GAGCATTTCGAGCATCCTGC+CGG + Chr5:82372603-82372622 None:intergenic 55.0%
GATAGTTCCCCACCTTGCGT+TGG + Chr5:82370495-82370514 None:intergenic 55.0%
GGGCATGTAGAGAGAAGACC+TGG - Chr5:82368706-82368725 MsG0580028561.01.T01:intron 55.0%
GGTTGGGCACAGTTCAGTTC+AGG + Chr5:82371077-82371096 None:intergenic 55.0%
GTACGGGACAAAGGGTTGGA+CGG - Chr5:82368515-82368534 MsG0580028561.01.T01:intron 55.0%
GTGGGGGATGAGGAAACTGA+TGG + Chr5:82371259-82371278 None:intergenic 55.0%
TAGTTCCCCACCTTGCGTTG+GGG + Chr5:82370493-82370512 None:intergenic 55.0%
TCGAGAAGGAGGCTTACGAG+TGG - Chr5:82370324-82370343 MsG0580028561.01.T01:CDS 55.0%
TGTATGTAGCCGACCCCACT+TGG - Chr5:82368886-82368905 MsG0580028561.01.T01:intron 55.0%
TTTGGGGGGAGGGAAGTAGA+GGG - Chr5:82371493-82371512 MsG0580028561.01.T01:intron 55.0%
! CCAAGCCTTATCCCACCAAG+TGG + Chr5:82368904-82368923 None:intergenic 55.0%
! CCACTTGGTGGGATAAGGCT+TGG - Chr5:82368901-82368920 MsG0580028561.01.T01:intron 55.0%
! GGGGAATACCTCGCCTTGTT+TGG - Chr5:82370279-82370298 MsG0580028561.01.T01:CDS 55.0%
!! AAGAGGGGAGGAGAGTGCTT+AGG + Chr5:82371790-82371809 None:intergenic 55.0%
!! AGAGGGGAGGAGAGTGCTTA+GGG + Chr5:82371789-82371808 None:intergenic 55.0%
!! AGCTTTAGGGAGAGACGAGG+GGG - Chr5:82370260-82370279 MsG0580028561.01.T01:intron 55.0%
!! GAGAGCTTTAGGGAGAGACG+AGG - Chr5:82370257-82370276 MsG0580028561.01.T01:intron 55.0%
!! GAGCTTTAGGGAGAGACGAG+GGG - Chr5:82370259-82370278 MsG0580028561.01.T01:intron 55.0%
!! TCCCCTGAAAGCATCCTCTC+TGG + Chr5:82367187-82367206 None:intergenic 55.0%
!! TTGTAGTGGAGGGCTTTGGG+GGG - Chr5:82371479-82371498 MsG0580028561.01.T01:intron 55.0%
AGCAGGCCTCATTCCGTCCA+GGG - Chr5:82372510-82372529 MsG0580028561.01.T01:intron 60.0%
ATGTAGCCGACCCCACTTGG+TGG - Chr5:82368889-82368908 MsG0580028561.01.T01:intron 60.0%
GACGCCTAAGCTTCGAGGAC+AGG - Chr5:82369287-82369306 MsG0580028561.01.T01:intron 60.0%
GAGGTGAGCAGTCGAGAAGG+AGG - Chr5:82370313-82370332 MsG0580028561.01.T01:CDS 60.0%
GTTGGGAGCAGCTGCCTCTT+GGG + Chr5:82372543-82372562 None:intergenic 60.0%
TGTAGCCGACCCCACTTGGT+GGG - Chr5:82368890-82368909 MsG0580028561.01.T01:intron 60.0%
TGTTGGGAGCAGCTGCCTCT+TGG + Chr5:82372544-82372563 None:intergenic 60.0%
! CGACCCCACTTGGTGGGATA+AGG - Chr5:82368896-82368915 MsG0580028561.01.T01:intron 60.0%
! CTTTGGGGGGAGGGAAGTAG+AGG - Chr5:82371492-82371511 MsG0580028561.01.T01:intron 60.0%
ACCGGACCCTGGACGGAATG+AGG + Chr5:82372519-82372538 None:intergenic 65.0%
AGCAGCTGCCTCTTGGGCAC+CGG + Chr5:82372537-82372556 None:intergenic 65.0%
CAGCAGGCCTCATTCCGTCC+AGG - Chr5:82372509-82372528 MsG0580028561.01.T01:intron 65.0%
GCCTCATTCCGTCCAGGGTC+CGG - Chr5:82372515-82372534 MsG0580028561.01.T01:intron 65.0%
GTGTGGGAGGGAACATGGGG+TGG + Chr5:82371293-82371312 None:intergenic 65.0%
!! AGTGGAGGGCTTTGGGGGGA+GGG - Chr5:82371483-82371502 MsG0580028561.01.T01:intron 65.0%
!! TAGTGGAGGGCTTTGGGGGG+AGG - Chr5:82371482-82371501 MsG0580028561.01.T01:intron 65.0%
TCCAGGGTCCGGTGCCCAAG+AGG - Chr5:82372526-82372545 MsG0580028561.01.T01:intron 70.0%
!! CTTGGGCACCGGACCCTGGA+CGG + Chr5:82372526-82372545 None:intergenic 70.0%
!! GCCTCTTGGGCACCGGACCC+TGG + Chr5:82372530-82372549 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 82367145 82373112 82367145 ID=MsG0580028561.01;Name=MsG0580028561.01
Chr5 mRNA 82367145 82373112 82367145 ID=MsG0580028561.01.T01;Parent=MsG0580028561.01;Name=MsG0580028561.01.T01;_AED=0.41;_eAED=0.41;_QI=48|1|1|1|1|1|5|322|234
Chr5 exon 82367145 82367745 82367145 ID=MsG0580028561.01.T01:exon:33122;Parent=MsG0580028561.01.T01
Chr5 exon 82368224 82368309 82368224 ID=MsG0580028561.01.T01:exon:33121;Parent=MsG0580028561.01.T01
Chr5 exon 82370271 82370364 82370271 ID=MsG0580028561.01.T01:exon:33120;Parent=MsG0580028561.01.T01
Chr5 exon 82370865 82371037 82370865 ID=MsG0580028561.01.T01:exon:33119;Parent=MsG0580028561.01.T01
Chr5 exon 82372992 82373112 82372992 ID=MsG0580028561.01.T01:exon:33118;Parent=MsG0580028561.01.T01
Chr5 five_prime_UTR 82373065 82373112 82373065 ID=MsG0580028561.01.T01:five_prime_utr;Parent=MsG0580028561.01.T01
Chr5 CDS 82372992 82373064 82372992 ID=MsG0580028561.01.T01:cds;Parent=MsG0580028561.01.T01
Chr5 CDS 82370865 82371037 82370865 ID=MsG0580028561.01.T01:cds;Parent=MsG0580028561.01.T01
Chr5 CDS 82370271 82370364 82370271 ID=MsG0580028561.01.T01:cds;Parent=MsG0580028561.01.T01
Chr5 CDS 82368224 82368309 82368224 ID=MsG0580028561.01.T01:cds;Parent=MsG0580028561.01.T01
Chr5 CDS 82367467 82367745 82367467 ID=MsG0580028561.01.T01:cds;Parent=MsG0580028561.01.T01
Chr5 three_prime_UTR 82367145 82367466 82367145 ID=MsG0580028561.01.T01:three_prime_utr;Parent=MsG0580028561.01.T01
Gene Sequence

>MsG0580028561.01.T01

ATGCTTTCAGGGGATATACCTCCAAATCAAACCATTTACATTAAGAATCTCAATGAAAAGATCAAGAAAGACGAGTTAAAGAGATCTCTGTATTGCTTATTCTCTCAATATGGAAGGATTTTGGACATTATTGCTCTAAAGACGCCTAAGCTTCGAGGACAGGCATGGGTTTGTTTTAGCGAAGTAACTGCTGCCAGTAATGCAGTGCGACAGATGCAAAACTTCCCATTTTATGAAAAACCTATGAGAATTCAATATGCAAAAACAAAGTCAGATTGTATTGCTAAAGAAGAGGGAAGCTTTGTTCCAAGGGAGAAGAAAAAGAAACAAGAGGAGAAAGCTGAGAAAAAGAGGTATGCTGATGAATCAAAACAATCTTCTGTGCCTAATGGTGGAACACATGGTGCAAGTAATGGTGGCTCAACACAGGCCTCATTCCGTCCAGGGTCCGGTGCCCAAGAGGCAGCTGCTCCCAACAATATTTTGTTCATAGAGAATTTGCCTTATGAAACTACCGGCAGGATGCTCGAAATGCTCTTCGAACAATACCCAGGTTTTAAGGAAGTGCGCTTGATCGAAGCAAAGCCAGGTATCGCATTTGTAGATTTTGAAGATGAGGCACAATCATCCATGGCAATGCAGGCTCTACAAGGCTTCAAAATCACCCCTCAAAATCCCATGATTATAAACTTTGCTAAGAAGTAA
Protein sequence

>MsG0580028561.01.T01

MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKRYADESKQSSVPNGGTHGASNGGSTQASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDEAQSSMAMQALQGFKITPQNPMIINFAKK*