AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041306.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041306.01.T01 MTR_4g084990 96.327 245 5 2 1 241 1 245 1.16e-173 478
MsG0780041306.01.T01 MTR_4g084990 95.918 245 5 3 1 241 1 244 6.05e-171 471
MsG0780041306.01.T01 MTR_7g108715 96.226 159 2 2 87 241 3 161 6.07e-107 305
MsG0780041306.01.T01 MTR_4g084990 93.464 153 9 1 1 153 1 152 2.15e-104 300
MsG0780041306.01.T01 MTR_5g074430 62.069 232 83 3 11 241 7 234 3.96e-90 266
MsG0780041306.01.T01 MTR_5g074430 61.373 233 82 3 11 241 7 233 3.75e-89 263
MsG0780041306.01.T01 MTR_1g055405 60.440 182 66 3 61 241 103 279 6.46e-62 196
MsG0780041306.01.T01 MTR_7g108725 97.333 75 2 0 1 75 1 75 2.47e-47 152
MsG0780041306.01.T01 MTR_4g085040 92.308 78 6 0 1 78 1 78 4.74e-45 148
MsG0780041306.01.T01 MTR_4g085000 95.588 68 3 0 1 68 1 68 2.13e-41 136
MsG0780041306.01.T01 MTR_3g072860 72.917 48 13 0 61 108 73 120 3.33e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041306.01.T01 AT2G47580 72.358 246 55 6 2 241 12 250 2.31e-119 340
MsG0780041306.01.T01 AT2G30260 60.606 231 86 2 11 241 7 232 9.64e-100 290
MsG0780041306.01.T01 AT1G06960 58.190 232 87 3 11 241 7 229 4.13e-90 265
MsG0780041306.01.T01 AT1G06960 57.635 203 76 3 40 241 7 200 1.15e-75 228
MsG0780041306.01.T01 AT2G30260 55.000 140 59 1 11 150 7 142 1.55e-50 162
MsG0780041306.01.T01 AT1G06960 54.487 156 61 3 87 241 4 150 3.49e-48 156
MsG0780041306.01.T01 AT1G06960 58.120 117 40 1 11 118 7 123 1.47e-44 147
MsG0780041306.01.T01 AT1G06960 65.979 97 33 0 11 107 7 103 8.48e-44 144
MsG0780041306.01.T01 AT1G06960 56.818 88 29 1 40 118 7 94 3.40e-30 109

Find 55 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGCCTTTGTGGAATA+TGG 0.226538 7:-89433908 MsG0780041306.01.T01:CDS
TGAATAAAGAGAATATTATT+TGG 0.260734 7:+89434025 None:intergenic
CTTCTGCTTCTAATGCTCTT+AGG 0.307963 7:-89438259 MsG0780041306.01.T01:CDS
TACCATGGGCTTATCATAGA+AGG 0.348156 7:+89438220 None:intergenic
CAGCTAAATTAGCGTCGTTT+TGG 0.351681 7:+89434432 None:intergenic
CCTGCTTATGCTGGTGGTTA+CGG 0.390910 7:-89434395 MsG0780041306.01.T01:CDS
CACCAGCATAAGCAGGATTT+AGG 0.401811 7:+89434402 None:intergenic
TATTCCACAAAGGCAATTCC+TGG 0.402314 7:+89433911 None:intergenic
GTTATCCCAGATACCTTATC+CGG 0.404748 7:-89434083 MsG0780041306.01.T01:intron
ATGCTGTTTCTTCAATATCC+TGG 0.406930 7:-89433965 MsG0780041306.01.T01:CDS
TTTCAAAACTCTGAAACATA+AGG 0.414794 7:-89438312 MsG0780041306.01.T01:CDS
GTTGAGATTGTTGATGTAGA+TGG 0.435939 7:+89438496 None:intergenic
TTTGCATAAGTTATCAACAT+AGG 0.436644 7:+89433821 None:intergenic
GACTTTGCACCGCCCGGATA+AGG 0.436680 7:+89434070 None:intergenic
TTTGGTGGTGCAGGAGCCTC+AGG 0.447131 7:+89434043 None:intergenic
GCAATCCACAGTGGCTATGC+AGG 0.457768 7:-89433876 MsG0780041306.01.T01:CDS
AGAATATTATTTGGTGGTGC+AGG 0.462021 7:+89434034 None:intergenic
TCTTCAATATCCTGGATTCA+AGG 0.474103 7:-89433957 MsG0780041306.01.T01:CDS
TTGCATAAGTTATCAACATA+GGG 0.478071 7:+89433822 None:intergenic
ATCATGGGAGTGGTCTCGTT+GGG 0.478382 7:+89433995 None:intergenic
CAAAACGACGCTAATTTAGC+TGG 0.485082 7:-89434431 MsG0780041306.01.T01:CDS
TAAGCCAGGAATTGCCTTTG+TGG 0.487844 7:-89433915 MsG0780041306.01.T01:CDS
TGGATTCAAGGAAGTTAGAA+TGG 0.488429 7:-89433945 MsG0780041306.01.T01:CDS
TTCAAAACTCTGAAACATAA+GGG 0.489274 7:-89438311 MsG0780041306.01.T01:CDS
GAAACATAAGGGTCAAGCTT+GGG 0.490093 7:-89438300 MsG0780041306.01.T01:CDS
ATTCTAACTTCCTTGAATCC+AGG 0.502372 7:+89433947 None:intergenic
TGCAGAGAATACAGTATGCC+AGG 0.509126 7:-89435010 MsG0780041306.01.T01:intron
AGAATGGTTGAAGCTAAGCC+AGG 0.509824 7:-89433929 MsG0780041306.01.T01:CDS
GGCCTAAATCCTGCTTATGC+TGG 0.518486 7:-89434404 MsG0780041306.01.T01:CDS
ACCATGGGCTTATCATAGAA+GGG 0.521161 7:+89438221 None:intergenic
AAACAGCATTTGAAGCATCA+TGG 0.523248 7:+89433979 None:intergenic
GACGCTAATTTAGCTGGAAG+TGG 0.528644 7:-89434425 MsG0780041306.01.T01:CDS
AACAGCATTTGAAGCATCAT+GGG 0.537484 7:+89433980 None:intergenic
TGAAACATAAGGGTCAAGCT+TGG 0.538887 7:-89438301 MsG0780041306.01.T01:CDS
CATCATGGGAGTGGTCTCGT+TGG 0.539108 7:+89433994 None:intergenic
GTGGCTATGCAGGCGCTGCA+AGG 0.546739 7:-89433866 MsG0780041306.01.T01:CDS
GGTAAGGACTTTGCACCGCC+CGG 0.553468 7:+89434064 None:intergenic
ATAAAGAGAATATTATTTGG+TGG 0.560203 7:+89434028 None:intergenic
CTAAATCCTGCTTATGCTGG+TGG 0.563875 7:-89434401 MsG0780041306.01.T01:CDS
CCGTAACCACCAGCATAAGC+AGG 0.564623 7:+89434395 None:intergenic
CGAAAGAGGCACGACGACAA+AGG 0.572729 7:-89434933 MsG0780041306.01.T01:intron
CATTTGAAGCATCATGGGAG+TGG 0.573182 7:+89433985 None:intergenic
TGGTGCAGGAGCCTCAGGTA+AGG 0.588948 7:+89434048 None:intergenic
TATGACATCAGATTTAGTCC+TGG 0.590587 7:+89434992 None:intergenic
CCCCTTCTATGATAAGCCCA+TGG 0.593341 7:-89438222 MsG0780041306.01.T01:intron
TCAATTTGGGAAGATACTTG+AGG 0.598924 7:-89438342 MsG0780041306.01.T01:CDS
AATGCTCTTAGGCAAATGCA+AGG 0.618597 7:-89438248 MsG0780041306.01.T01:CDS
CAGCGCCTGCATAGCCACTG+TGG 0.631864 7:+89433871 None:intergenic
CGGTGCAAAGTCCTTACCTG+AGG 0.634764 7:-89434059 MsG0780041306.01.T01:CDS
CCATGGGCTTATCATAGAAG+GGG 0.644197 7:+89438222 None:intergenic
TTATCCCAGATACCTTATCC+GGG 0.647182 7:-89434082 MsG0780041306.01.T01:intron
CTCATCTCCATATTCCACAA+AGG 0.648390 7:+89433901 None:intergenic
GATGTCATAGCAAAAGCAGA+CGG 0.699134 7:-89434978 MsG0780041306.01.T01:CDS
TCCCAGATACCTTATCCGGG+CGG 0.741643 7:-89434079 MsG0780041306.01.T01:intron
AGATGAGATGCAATCCACAG+TGG 0.772288 7:-89433885 MsG0780041306.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAAATAAATAAATTA+CGG - Chr7:89435718-89435737 MsG0780041306.01.T01:intron 0.0%
!!! TATATTTTTTTTTTTTTTTA+AGG - Chr7:89437460-89437479 MsG0780041306.01.T01:intron 0.0%
!! AAATAAAATTATGTGATGTA+TGG - Chr7:89436558-89436577 MsG0780041306.01.T01:intron 15.0%
!! ATATGTATATCTACTAAAAA+AGG + Chr7:89436281-89436300 None:intergenic 15.0%
!! ATTAAGTTACATAAATTTCA+AGG + Chr7:89435055-89435074 None:intergenic 15.0%
!! CTAATGAAAAATTGATATTA+CGG + Chr7:89433916-89433935 None:intergenic 15.0%
!! GCATAAAAAATATCATTTAT+TGG + Chr7:89437735-89437754 None:intergenic 15.0%
!! TACTAAAAAAGGAATATATT+GGG + Chr7:89436270-89436289 None:intergenic 15.0%
!! TCACTATAAATGTAATTTAA+GGG - Chr7:89435655-89435674 MsG0780041306.01.T01:intron 15.0%
!! TGAATAAAGAGAATATTATT+TGG + Chr7:89438331-89438350 None:intergenic 15.0%
!! TTAAATTACATTTATAGTGA+AGG + Chr7:89435655-89435674 None:intergenic 15.0%
!! TTCACTATAAATGTAATTTA+AGG - Chr7:89435654-89435673 MsG0780041306.01.T01:intron 15.0%
!!! TGATTTAACAAAACATTTTA+TGG + Chr7:89435747-89435766 None:intergenic 15.0%
!!! TTCTATCATAAAACATATTT+TGG + Chr7:89434740-89434759 None:intergenic 15.0%
!!! TTTTTCAGTTAGAATTTTTT+GGG - Chr7:89434218-89434237 MsG0780041306.01.T01:intron 15.0%
!!! TTTTTTCAGTTAGAATTTTT+TGG - Chr7:89434217-89434236 MsG0780041306.01.T01:intron 15.0%
!! AAAAAACCTAAGAAATATAC+TGG + Chr7:89437600-89437619 None:intergenic 20.0%
!! AATATATCTTGATGTACATT+TGG - Chr7:89435914-89435933 MsG0780041306.01.T01:intron 20.0%
!! ACAAATCAAGCAATTATTAT+CGG + Chr7:89436679-89436698 None:intergenic 20.0%
!! ACTAAAAAAGGAATATATTG+GGG + Chr7:89436269-89436288 None:intergenic 20.0%
!! AGAAAAAAAGTCATGATAAA+TGG + Chr7:89435797-89435816 None:intergenic 20.0%
!! AGATTTGAAAAATATCAAAC+AGG + Chr7:89436785-89436804 None:intergenic 20.0%
!! ATAAAGAGAATATTATTTGG+TGG + Chr7:89438328-89438347 None:intergenic 20.0%
!! ATAACTTATGCAAAGAAATA+GGG - Chr7:89438541-89438560 MsG0780041306.01.T01:CDS 20.0%
!! ATATATCTTGATGTACATTT+GGG - Chr7:89435915-89435934 MsG0780041306.01.T01:intron 20.0%
!! ATTCAACAAAATTATAGTGA+AGG + Chr7:89436145-89436164 None:intergenic 20.0%
!! CTACTAAAAAAGGAATATAT+TGG + Chr7:89436271-89436290 None:intergenic 20.0%
!! GTAAGAAGAAGAATATATTT+AGG + Chr7:89435233-89435252 None:intergenic 20.0%
!! TAATACATTAACAATGAAGA+AGG - Chr7:89437702-89437721 MsG0780041306.01.T01:intron 20.0%
!!! AAATAGGAAGATATTTTTCT+TGG - Chr7:89435414-89435433 MsG0780041306.01.T01:intron 20.0%
!!! AATAGATTAGAGATTTGTTA+TGG + Chr7:89436953-89436972 None:intergenic 20.0%
!!! ATACTCTTATTTGATGTTAA+GGG + Chr7:89435873-89435892 None:intergenic 20.0%
!!! ATAGATTAGAGATTTGTTAT+GGG + Chr7:89436952-89436971 None:intergenic 20.0%
!!! GTTTCTCTTATAATTTTTCT+AGG + Chr7:89434684-89434703 None:intergenic 20.0%
!!! TAACTAAGTGTTTTGTTTTT+GGG - Chr7:89435028-89435047 MsG0780041306.01.T01:intron 20.0%
!!! TATTTTTCTTGGAATGATAA+TGG - Chr7:89435425-89435444 MsG0780041306.01.T01:intron 20.0%
!!! TCATAATTTTAACCGTTTTA+TGG - Chr7:89438088-89438107 MsG0780041306.01.T01:intron 20.0%
!!! TTAACTAAGTGTTTTGTTTT+TGG - Chr7:89435027-89435046 MsG0780041306.01.T01:intron 20.0%
!!! TTGTAGTTTATTTTAGACAA+TGG - Chr7:89438010-89438029 MsG0780041306.01.T01:intron 20.0%
!!! TTTTTTTTTGTTGATGTTGT+CGG - Chr7:89437621-89437640 MsG0780041306.01.T01:intron 20.0%
! AACGAAAAAATCAAAATCGA+CGG - Chr7:89433877-89433896 MsG0780041306.01.T01:CDS 25.0%
! AAGATTGACCATTAATACAT+AGG - Chr7:89436208-89436227 MsG0780041306.01.T01:intron 25.0%
! ACGAAAAATAACACAAATCA+CGG + Chr7:89436752-89436771 None:intergenic 25.0%
! AGAAGAAGAATATATTTAGG+TGG + Chr7:89435230-89435249 None:intergenic 25.0%
! AGATTTAGAGATTAATGAGT+TGG - Chr7:89434713-89434732 MsG0780041306.01.T01:intron 25.0%
! ATTCAACAAAATTATAGCGA+AGG + Chr7:89435103-89435122 None:intergenic 25.0%
! ATTTCCATAAAACTATTCTC+AGG - Chr7:89437291-89437310 MsG0780041306.01.T01:intron 25.0%
! CAATTAAAATAAAGCTCCAA+CGG + Chr7:89436703-89436722 None:intergenic 25.0%
! CGAGAAAAAATACCATAAAA+CGG + Chr7:89438103-89438122 None:intergenic 25.0%
! CTTAAATGCTATCTATCAAA+GGG - Chr7:89437095-89437114 MsG0780041306.01.T01:intron 25.0%
! CTTAACATCAAATAAGAGTA+TGG - Chr7:89435872-89435891 MsG0780041306.01.T01:intron 25.0%
! CTTTGATAGATAGCATTTAA+GGG + Chr7:89437096-89437115 None:intergenic 25.0%
! GAAAACAAAAAGGAATGTTT+CGG - Chr7:89434383-89434402 MsG0780041306.01.T01:CDS 25.0%
! GATAACTTATGCAAAGAAAT+AGG - Chr7:89438540-89438559 MsG0780041306.01.T01:CDS 25.0%
! GTGCTTAGATACTTATTAAT+TGG + Chr7:89437061-89437080 None:intergenic 25.0%
! TGTTAAGTTTAAGCTCATAT+TGG - Chr7:89437492-89437511 MsG0780041306.01.T01:intron 25.0%
! TTAAATGCTATCTATCAAAG+GGG - Chr7:89437096-89437115 MsG0780041306.01.T01:intron 25.0%
! TTAGACAATGGTCATATTAT+AGG - Chr7:89438022-89438041 MsG0780041306.01.T01:intron 25.0%
! TTATTAATTGGTATCACAAC+TGG + Chr7:89437049-89437068 None:intergenic 25.0%
! TTGATCAAAATTGAACTTGA+TGG + Chr7:89435551-89435570 None:intergenic 25.0%
! TTGCATAAGTTATCAACATA+GGG + Chr7:89438534-89438553 None:intergenic 25.0%
! TTGGATTTGAGAAAACAAAA+AGG - Chr7:89434373-89434392 MsG0780041306.01.T01:intron 25.0%
! TTGTCTATATCACAATATGA+GGG + Chr7:89437209-89437228 None:intergenic 25.0%
! TTTGCATAAGTTATCAACAT+AGG + Chr7:89438535-89438554 None:intergenic 25.0%
!! AAAAAATTGTTGTGTTGTTG+TGG - Chr7:89436334-89436353 MsG0780041306.01.T01:intron 25.0%
!! AAATAAGAGTATGGTTTAGA+GGG - Chr7:89435881-89435900 MsG0780041306.01.T01:intron 25.0%
!! ATGTAATTTAAGGGTATGTT+AGG - Chr7:89435664-89435683 MsG0780041306.01.T01:intron 25.0%
!! ATTGTGTTCTATGCTATTTA+TGG - Chr7:89434561-89434580 MsG0780041306.01.T01:intron 25.0%
!! CATACTCTTATTTGATGTTA+AGG + Chr7:89435874-89435893 None:intergenic 25.0%
!! GCAACTCTTTTAATGAATAT+CGG - Chr7:89437818-89437837 MsG0780041306.01.T01:intron 25.0%
!! TATTTTGTTCATTGAGTGTA+GGG + Chr7:89435399-89435418 None:intergenic 25.0%
!!! AACTAAGTGTTTTGTTTTTG+GGG - Chr7:89435029-89435048 MsG0780041306.01.T01:intron 25.0%
!!! AACTTTTTGTTTTGTCTGTT+TGG - Chr7:89437232-89437251 MsG0780041306.01.T01:intron 25.0%
!!! ATTTTAATTGGTCATATGCA+TGG - Chr7:89436713-89436732 MsG0780041306.01.T01:intron 25.0%
!!! TAGATTAGAGATTTGTTATG+GGG + Chr7:89436951-89436970 None:intergenic 25.0%
!!! TATCCAATTACATTTTTCAG+CGG - Chr7:89437882-89437901 MsG0780041306.01.T01:intron 25.0%
!!! TTACTATTTTTCTAGTGTTC+TGG + Chr7:89435469-89435488 None:intergenic 25.0%
!!! TTCAAAACTCTGAAACATAA+GGG - Chr7:89434042-89434061 MsG0780041306.01.T01:CDS 25.0%
!!! TTTCAAAACTCTGAAACATA+AGG - Chr7:89434041-89434060 MsG0780041306.01.T01:CDS 25.0%
!!! TTTTGTTTTCTCAAATCCAA+TGG + Chr7:89434373-89434392 None:intergenic 25.0%
!!! TTTTTTTTGTTGATGTTGTC+GGG - Chr7:89437622-89437641 MsG0780041306.01.T01:intron 25.0%
AAAAGGCCAGTATATTTCTT+AGG - Chr7:89437591-89437610 MsG0780041306.01.T01:intron 30.0%
AAATAGTAAAACTGATGCCA+AGG - Chr7:89435480-89435499 MsG0780041306.01.T01:intron 30.0%
AAATCTTTGAATCACGACTT+TGG + Chr7:89436412-89436431 None:intergenic 30.0%
AACAATCTTCAACATGACAT+AGG - Chr7:89434302-89434321 MsG0780041306.01.T01:intron 30.0%
AATCTTTGAATCACGACTTT+GGG + Chr7:89436411-89436430 None:intergenic 30.0%
AGAGAAAAAATTCATGTTGC+TGG + Chr7:89436808-89436827 None:intergenic 30.0%
AGGGATTATGATAGAGATTT+GGG + Chr7:89437190-89437209 None:intergenic 30.0%
ATCAAGTAGTATGGAATGTT+TGG + Chr7:89436914-89436933 None:intergenic 30.0%
ATTGACCATTAATACATAGG+CGG - Chr7:89436211-89436230 MsG0780041306.01.T01:intron 30.0%
CCTTAAATGCTATCTATCAA+AGG - Chr7:89437094-89437113 MsG0780041306.01.T01:intron 30.0%
CCTTTGATAGATAGCATTTA+AGG + Chr7:89437097-89437116 None:intergenic 30.0%
CGAAAAATAACACAAATCAC+GGG + Chr7:89436751-89436770 None:intergenic 30.0%
CTAACAGAGAATTTATTCCA+CGG + Chr7:89435358-89435377 None:intergenic 30.0%
CTACACTCAATGAACAAAAT+AGG - Chr7:89435398-89435417 MsG0780041306.01.T01:intron 30.0%
CTATCCATTCTAAGTACTTA+GGG - Chr7:89436833-89436852 MsG0780041306.01.T01:intron 30.0%
CTCCTCTATAGATATTATGT+TGG - Chr7:89434443-89434462 MsG0780041306.01.T01:CDS 30.0%
GACCAACATAATATCTATAG+AGG + Chr7:89434448-89434467 None:intergenic 30.0%
GTTGTCTATATCACAATATG+AGG + Chr7:89437210-89437229 None:intergenic 30.0%
TAAATATGACAAGTCGTACT+CGG + Chr7:89435511-89435530 None:intergenic 30.0%
TAGAATAGTTAACATGCCAT+TGG - Chr7:89434354-89434373 MsG0780041306.01.T01:intron 30.0%
TATTCTGTTCAATAAGGGAA+GGG + Chr7:89434867-89434886 None:intergenic 30.0%
TATTCTTCTTCTTACTGTGA+AGG - Chr7:89435238-89435257 MsG0780041306.01.T01:intron 30.0%
TCTATCCATTCTAAGTACTT+AGG - Chr7:89436832-89436851 MsG0780041306.01.T01:intron 30.0%
TGATGTATGGTCTATCTTAA+TGG - Chr7:89436571-89436590 MsG0780041306.01.T01:intron 30.0%
TGTAATGCTTATTTAGTGTC+CGG - Chr7:89434414-89434433 MsG0780041306.01.T01:CDS 30.0%
TGTATTAATGGTCAATCTTG+TGG + Chr7:89436207-89436226 None:intergenic 30.0%
TGTTGTGAACAACTACTAAT+AGG - Chr7:89436470-89436489 MsG0780041306.01.T01:intron 30.0%
TTACCCAATCAAAGACAAAA+AGG + Chr7:89436171-89436190 None:intergenic 30.0%
TTCCCTTATTGAACAGAATA+GGG - Chr7:89434867-89434886 MsG0780041306.01.T01:intron 30.0%
TTCTATAATACACAGAAGCA+CGG - Chr7:89438202-89438221 MsG0780041306.01.T01:intron 30.0%
TTGCTAAATGAAAATGCAGA+AGG - Chr7:89434468-89434487 MsG0780041306.01.T01:intron 30.0%
! AATTTAAGGGTATGTTAGGA+TGG - Chr7:89435668-89435687 MsG0780041306.01.T01:intron 30.0%
! ACGTTTTCTCTTCAAAATGA+GGG - Chr7:89437537-89437556 MsG0780041306.01.T01:intron 30.0%
! ATTTTGTTCATTGAGTGTAG+GGG + Chr7:89435398-89435417 None:intergenic 30.0%
! CAAATAAGAGTATGGTTTAG+AGG - Chr7:89435880-89435899 MsG0780041306.01.T01:intron 30.0%
! CTATTTTGTTCATTGAGTGT+AGG + Chr7:89435400-89435419 None:intergenic 30.0%
! GAATAGGGAGATATTTTTCT+TGG - Chr7:89434882-89434901 MsG0780041306.01.T01:intron 30.0%
! GTATGTTTTCTGATAAAAGC+TGG - Chr7:89438128-89438147 MsG0780041306.01.T01:intron 30.0%
! TAGCCTTTTTGTCTTTGATT+GGG - Chr7:89436165-89436184 MsG0780041306.01.T01:intron 30.0%
! TATTTTTCTTGGAAGGATAG+TGG - Chr7:89434893-89434912 MsG0780041306.01.T01:intron 30.0%
! TTCTCTAGCTGAATTTTGTT+TGG - Chr7:89434326-89434345 MsG0780041306.01.T01:intron 30.0%
!! ATCCAATTACATTTTTCAGC+GGG - Chr7:89437883-89437902 MsG0780041306.01.T01:intron 30.0%
!! TTAGCCTTTTTGTCTTTGAT+TGG - Chr7:89436164-89436183 MsG0780041306.01.T01:intron 30.0%
!! TTATCAACATAGGGTTTTGT+GGG + Chr7:89438525-89438544 None:intergenic 30.0%
!!! ATTTGTGTTATTTTTCGTGC+TGG - Chr7:89436754-89436773 MsG0780041306.01.T01:intron 30.0%
!!! CGTTGGAGCTTTATTTTAAT+TGG - Chr7:89436701-89436720 MsG0780041306.01.T01:intron 30.0%
!!! TATGGTATTTTTTCTCGAAC+TGG - Chr7:89438106-89438125 MsG0780041306.01.T01:intron 30.0%
!!! TTTTTTTGTTGATGTTGTCG+GGG - Chr7:89437623-89437642 MsG0780041306.01.T01:intron 30.0%
AAACTTTATCCCACTAGATG+GGG + Chr7:89434794-89434813 None:intergenic 35.0%
AAATAGCAAAACTGATGCCA+AGG - Chr7:89434943-89434962 MsG0780041306.01.T01:CDS 35.0%
AAGATCCGCCTATGTATTAA+TGG + Chr7:89436219-89436238 None:intergenic 35.0%
AAGTAGTATGGAATGTTTGG+TGG + Chr7:89436911-89436930 None:intergenic 35.0%
ACATTCCATACTACTTGATG+TGG - Chr7:89436915-89436934 MsG0780041306.01.T01:intron 35.0%
ACTAAATACAGACTTGTACG+TGG - Chr7:89435585-89435604 MsG0780041306.01.T01:intron 35.0%
AGAATCAATTCCTGAAACTC+TGG + Chr7:89436379-89436398 None:intergenic 35.0%
AGAGCATATGATAGTACCAT+GGG + Chr7:89434150-89434169 None:intergenic 35.0%
AGCTAAGTTAACTATATCCG+TGG - Chr7:89435338-89435357 MsG0780041306.01.T01:intron 35.0%
ATCTTTGAATCACGACTTTG+GGG + Chr7:89436410-89436429 None:intergenic 35.0%
ATTCTAACTTCCTTGAATCC+AGG + Chr7:89438409-89438428 None:intergenic 35.0%
ATTCTGTTCAATAAGGGAAG+GGG + Chr7:89434866-89434885 None:intergenic 35.0%
ATTTATCAGATCACTAGAGG+TGG - Chr7:89434651-89434670 MsG0780041306.01.T01:intron 35.0%
CAAACTTTATCCCACTAGAT+GGG + Chr7:89434795-89434814 None:intergenic 35.0%
CATATTTATCCCCAATGTCA+AGG - Chr7:89435523-89435542 MsG0780041306.01.T01:intron 35.0%
CATTCCATACTACTTGATGT+GGG - Chr7:89436916-89436935 MsG0780041306.01.T01:intron 35.0%
CTATTCTGTTCAATAAGGGA+AGG + Chr7:89434868-89434887 None:intergenic 35.0%
CTCCCTATTCTGTTCAATAA+GGG + Chr7:89434872-89434891 None:intergenic 35.0%
CTTCCCTTATTGAACAGAAT+AGG - Chr7:89434866-89434885 MsG0780041306.01.T01:intron 35.0%
GAATCAATTCCTGAAACTCT+GGG + Chr7:89436378-89436397 None:intergenic 35.0%
GAGGGATTATGATAGAGATT+TGG + Chr7:89437191-89437210 None:intergenic 35.0%
GATAGATAGCATTTAAGGGA+TGG + Chr7:89437092-89437111 None:intergenic 35.0%
GCTATTTATCAGATCACTAG+AGG - Chr7:89434648-89434667 MsG0780041306.01.T01:intron 35.0%
GTATGGTCTATCTTAATGGA+TGG - Chr7:89436575-89436594 MsG0780041306.01.T01:intron 35.0%
GTTGAGATTGTTGATGTAGA+TGG + Chr7:89433860-89433879 None:intergenic 35.0%
TAATCTCATGGCCATTCTTA+CGG + Chr7:89436118-89436137 None:intergenic 35.0%
TATGACATCAGATTTAGTCC+TGG + Chr7:89437364-89437383 None:intergenic 35.0%
TCAATTTGGGAAGATACTTG+AGG - Chr7:89434011-89434030 MsG0780041306.01.T01:CDS 35.0%
TCTCCCTATTCTGTTCAATA+AGG + Chr7:89434873-89434892 None:intergenic 35.0%
TCTTCAATATCCTGGATTCA+AGG - Chr7:89438396-89438415 MsG0780041306.01.T01:intron 35.0%
TGGATTCAAGGAAGTTAGAA+TGG - Chr7:89438408-89438427 MsG0780041306.01.T01:intron 35.0%
TTGACTGTGTCTGATGTTTA+GGG - Chr7:89435628-89435647 MsG0780041306.01.T01:intron 35.0%
TTGATGTTAAGGGTCTGTTT+AGG + Chr7:89435863-89435882 None:intergenic 35.0%
! AAACAGCATTTGAAGCATCA+TGG + Chr7:89438377-89438396 None:intergenic 35.0%
! AACAGCATTTGAAGCATCAT+GGG + Chr7:89438376-89438395 None:intergenic 35.0%
! AAGAGCATATGATAGTACCA+TGG + Chr7:89434151-89434170 None:intergenic 35.0%
! AGGGAGATATTTTTCTTGGA+AGG - Chr7:89434886-89434905 MsG0780041306.01.T01:intron 35.0%
! ATGTAGATGGTCATGTTTTG+AGG + Chr7:89433847-89433866 None:intergenic 35.0%
! CACGTTTTCTCTTCAAAATG+AGG - Chr7:89437536-89437555 MsG0780041306.01.T01:intron 35.0%
! GTGGATTTTAGACATAGTGT+AGG - Chr7:89434912-89434931 MsG0780041306.01.T01:intron 35.0%
! GTTATCAACATAGGGTTTTG+TGG + Chr7:89438526-89438545 None:intergenic 35.0%
! TATGTTTGGGAATTGGGTTT+TGG + Chr7:89436082-89436101 None:intergenic 35.0%
!! ACGCTGTTTTCAGTCAATTT+GGG - Chr7:89433998-89434017 MsG0780041306.01.T01:CDS 35.0%
!! AGAATATTATTTGGTGGTGC+AGG + Chr7:89438322-89438341 None:intergenic 35.0%
!! ATGCTGTTTCTTCAATATCC+TGG - Chr7:89438388-89438407 MsG0780041306.01.T01:intron 35.0%
!! ATTTTTCAGCGGGCAAAAAA+AGG - Chr7:89437893-89437912 MsG0780041306.01.T01:intron 35.0%
!! CTTGCCTGAGAATAGTTTTA+TGG + Chr7:89437298-89437317 None:intergenic 35.0%
!! TATCAACATAGGGTTTTGTG+GGG + Chr7:89438524-89438543 None:intergenic 35.0%
!! TGTAGATGGTCATGTTTTGA+GGG + Chr7:89433846-89433865 None:intergenic 35.0%
!! TGTTTGGTGGTGTAATTAAG+TGG + Chr7:89436898-89436917 None:intergenic 35.0%
!!! AACATGAAAGTCACTTTTGC+CGG + Chr7:89435316-89435335 None:intergenic 35.0%
!!! TTTTTTGTTGATGTTGTCGG+GGG - Chr7:89437624-89437643 MsG0780041306.01.T01:intron 35.0%
AAAACGACCACTTGAACACT+TGG + Chr7:89435000-89435019 None:intergenic 40.0%
AAACGACCACTTGAACACTT+GGG + Chr7:89434999-89435018 None:intergenic 40.0%
AAGATCAGCCTATGGATCAA+TGG + Chr7:89435185-89435204 None:intergenic 40.0%
AAGTCCCACATCAAGTAGTA+TGG + Chr7:89436923-89436942 None:intergenic 40.0%
AATCTCATGGCCATTCTTAC+GGG + Chr7:89436117-89436136 None:intergenic 40.0%
AATGCTCTTAGGCAAATGCA+AGG - Chr7:89434105-89434124 MsG0780041306.01.T01:intron 40.0%
AATTCCCAAACATAGCCTAC+GGG - Chr7:89436088-89436107 MsG0780041306.01.T01:intron 40.0%
ACAAACTATTGCACATCCGA+TGG + Chr7:89437260-89437279 None:intergenic 40.0%
ACCATGGGCTTATCATAGAA+GGG + Chr7:89434135-89434154 None:intergenic 40.0%
AGTCTGTTCTTTGCTGATGA+AGG + Chr7:89437761-89437780 None:intergenic 40.0%
AGTGAAGGAAGCTAATCTCA+TGG + Chr7:89436130-89436149 None:intergenic 40.0%
ATACTACTTGATGTGGGACT+TGG - Chr7:89436922-89436941 MsG0780041306.01.T01:intron 40.0%
ATAGAGATTTGGGCAGTATG+GGG + Chr7:89437180-89437199 None:intergenic 40.0%
ATGTTAAGGGTCTGTTTAGG+AGG + Chr7:89435860-89435879 None:intergenic 40.0%
ATTGAGTAGTATGGGATGCT+CGG + Chr7:89437148-89437167 None:intergenic 40.0%
CAAAACGACGCTAATTTAGC+TGG - Chr7:89437922-89437941 MsG0780041306.01.T01:intron 40.0%
CAAACTATTGCACATCCGAT+GGG + Chr7:89437259-89437278 None:intergenic 40.0%
CAATCTTGTGGCTATGCTTA+TGG + Chr7:89436195-89436214 None:intergenic 40.0%
CAATTCCCAAACATAGCCTA+CGG - Chr7:89436087-89436106 MsG0780041306.01.T01:intron 40.0%
CATCCCATACTACTCAATGT+GGG - Chr7:89437150-89437169 MsG0780041306.01.T01:intron 40.0%
CCAAACTTTATCCCACTAGA+TGG + Chr7:89434796-89434815 None:intergenic 40.0%
CCATCTAGTGGGATAAAGTT+TGG - Chr7:89434793-89434812 MsG0780041306.01.T01:intron 40.0%
CTCATCTCCATATTCCACAA+AGG + Chr7:89438455-89438474 None:intergenic 40.0%
CTTCTGCTTCTAATGCTCTT+AGG - Chr7:89434094-89434113 MsG0780041306.01.T01:intron 40.0%
GAAACATAAGGGTCAAGCTT+GGG - Chr7:89434053-89434072 MsG0780041306.01.T01:CDS 40.0%
GAGCTTAAACTTAACAGTGC+AGG + Chr7:89437488-89437507 None:intergenic 40.0%
GATAGAGATTTGGGCAGTAT+GGG + Chr7:89437181-89437200 None:intergenic 40.0%
GATGTCATAGCAAAAGCAGA+CGG - Chr7:89437375-89437394 MsG0780041306.01.T01:intron 40.0%
GGAATTGCCTTTGTGGAATA+TGG - Chr7:89438445-89438464 MsG0780041306.01.T01:intron 40.0%
GGTGGTGTAATTAAGTGGTT+TGG + Chr7:89436893-89436912 None:intergenic 40.0%
GGTTCCCTAAGTACTTAGAA+TGG + Chr7:89436840-89436859 None:intergenic 40.0%
GTAGGCTATGTTTGGGAATT+GGG + Chr7:89436088-89436107 None:intergenic 40.0%
GTTATCCCAGATACCTTATC+CGG - Chr7:89438270-89438289 MsG0780041306.01.T01:CDS 40.0%
GTTGACTGTGTCTGATGTTT+AGG - Chr7:89435627-89435646 MsG0780041306.01.T01:intron 40.0%
TACCATGGGCTTATCATAGA+AGG + Chr7:89434136-89434155 None:intergenic 40.0%
TACTACTTGATGTGGGACTT+GGG - Chr7:89436923-89436942 MsG0780041306.01.T01:intron 40.0%
TAGACATAGTGTAGGACACT+AGG - Chr7:89434920-89434939 MsG0780041306.01.T01:intron 40.0%
TATGTTAGGATGGAGGGTTT+AGG - Chr7:89435678-89435697 MsG0780041306.01.T01:intron 40.0%
TATTCCACAAAGGCAATTCC+TGG + Chr7:89438445-89438464 None:intergenic 40.0%
TCTATCAAAGGGGAAGAACA+AGG - Chr7:89437106-89437125 MsG0780041306.01.T01:intron 40.0%
TCTTGTGATGATTGACACTG+TGG - Chr7:89434527-89434546 MsG0780041306.01.T01:intron 40.0%
TGAAACATAAGGGTCAAGCT+TGG - Chr7:89434052-89434071 MsG0780041306.01.T01:CDS 40.0%
TGACTGTGTCTGATGTTTAG+GGG - Chr7:89435629-89435648 MsG0780041306.01.T01:intron 40.0%
TGATAGAGATTTGGGCAGTA+TGG + Chr7:89437182-89437201 None:intergenic 40.0%
TGCCCAATAATGGCAACAAA+AGG - Chr7:89437574-89437593 MsG0780041306.01.T01:intron 40.0%
TGCCCGCTGAAAAATGTAAT+TGG + Chr7:89437888-89437907 None:intergenic 40.0%
TGTTAAGGGTCTGTTTAGGA+GGG + Chr7:89435859-89435878 None:intergenic 40.0%
TTATCCCAGATACCTTATCC+GGG - Chr7:89438271-89438290 MsG0780041306.01.T01:CDS 40.0%
TTCCCTTAGCTAGCAATCAA+GGG - Chr7:89436860-89436879 MsG0780041306.01.T01:intron 40.0%
TTTATCCCCAAGTGTTCAAG+TGG - Chr7:89434990-89435009 MsG0780041306.01.T01:CDS 40.0%
! ACTTGATGGATCCTTGACAT+TGG + Chr7:89435537-89435556 None:intergenic 40.0%
! AGTCTCATGGCTATGCTTTT+GGG + Chr7:89435160-89435179 None:intergenic 40.0%
! CAGCTAAATTAGCGTCGTTT+TGG + Chr7:89437924-89437943 None:intergenic 40.0%
! CTTGATGGATCCTTGACATT+GGG + Chr7:89435536-89435555 None:intergenic 40.0%
! GGCCTTTTGTTGCCATTATT+GGG + Chr7:89437579-89437598 None:intergenic 40.0%
! GTCTATCTTAATGGATGGTG+TGG - Chr7:89436580-89436599 MsG0780041306.01.T01:intron 40.0%
! TAAGGGTATGTTAGGATGGA+GGG - Chr7:89435672-89435691 MsG0780041306.01.T01:intron 40.0%
! TCAAGCTTGGGTGATTTTTG+AGG - Chr7:89434065-89434084 MsG0780041306.01.T01:CDS 40.0%
! TCTTAATGGATGGTGTGGTA+TGG - Chr7:89436585-89436604 MsG0780041306.01.T01:intron 40.0%
! TGGCCTTTTGTTGCCATTAT+TGG + Chr7:89437580-89437599 None:intergenic 40.0%
! TTAAGGGTATGTTAGGATGG+AGG - Chr7:89435671-89435690 MsG0780041306.01.T01:intron 40.0%
! TTGATGGATCCTTGACATTG+GGG + Chr7:89435535-89435554 None:intergenic 40.0%
! TTTTGTCTGTTTGGACCCAT+CGG - Chr7:89437241-89437260 MsG0780041306.01.T01:intron 40.0%
!! AATTGCTTGATTTGTGCCGT+TGG - Chr7:89436684-89436703 MsG0780041306.01.T01:intron 40.0%
!! CACGCTGTTTTCAGTCAATT+TGG - Chr7:89433997-89434016 MsG0780041306.01.T01:CDS 40.0%
!! CTAGCTTTGTCACAAGTTTG+TGG - Chr7:89436503-89436522 MsG0780041306.01.T01:intron 40.0%
!! GTAGATGGTCATGTTTTGAG+GGG + Chr7:89433845-89433864 None:intergenic 40.0%
!! TGTTTGGTTTGGTTGCCAAA+GGG - Chr7:89437651-89437670 MsG0780041306.01.T01:intron 40.0%
!! TTGTTTGGTTTGGTTGCCAA+AGG - Chr7:89437650-89437669 MsG0780041306.01.T01:intron 40.0%
!!! AATTGGGTTTTGGAGGGAAA+GGG + Chr7:89436072-89436091 None:intergenic 40.0%
!!! TAGATGGTCATGTTTTGAGG+GGG + Chr7:89433844-89433863 None:intergenic 40.0%
!!! TTTGGGAATTGGGTTTTGGA+GGG + Chr7:89436078-89436097 None:intergenic 40.0%
AACGACCACTTGAACACTTG+GGG + Chr7:89434998-89435017 None:intergenic 45.0%
ACAGCAGAGAAACTTACAGC+TGG + Chr7:89437991-89438010 None:intergenic 45.0%
ACTAGAACTGAGTCAGTCCT+TGG + Chr7:89434963-89434982 None:intergenic 45.0%
ACTCACTGAGTGCCCAATAA+TGG - Chr7:89437564-89437583 MsG0780041306.01.T01:intron 45.0%
AGAATGGTTGAAGCTAAGCC+AGG - Chr7:89438424-89438443 MsG0780041306.01.T01:intron 45.0%
AGATGAGATGCAATCCACAG+TGG - Chr7:89438468-89438487 MsG0780041306.01.T01:intron 45.0%
AGCGAAGGAAGCTAATCTCT+TGG + Chr7:89435088-89435107 None:intergenic 45.0%
ATCTATAGAGGAGACACGAC+CGG + Chr7:89434436-89434455 None:intergenic 45.0%
CACCAGCATAAGCAGGATTT+AGG + Chr7:89437954-89437973 None:intergenic 45.0%
CCATGGGCTTATCATAGAAG+GGG + Chr7:89434134-89434153 None:intergenic 45.0%
CGTAGGCTATGTTTGGGAAT+TGG + Chr7:89436089-89436108 None:intergenic 45.0%
CTAAATCCTGCTTATGCTGG+TGG - Chr7:89437952-89437971 MsG0780041306.01.T01:intron 45.0%
CTTCCCTTAGCTAGCAATCA+AGG - Chr7:89436859-89436878 MsG0780041306.01.T01:intron 45.0%
CTTGATTGCTAGCTAAGGGA+AGG + Chr7:89436861-89436880 None:intergenic 45.0%
GACGCTAATTTAGCTGGAAG+TGG - Chr7:89437928-89437947 MsG0780041306.01.T01:intron 45.0%
GAGACTGACCATTGATCCAT+AGG - Chr7:89435174-89435193 MsG0780041306.01.T01:intron 45.0%
GATACCCGTAGGCTATGTTT+GGG + Chr7:89436095-89436114 None:intergenic 45.0%
GCATCCCATACTACTCAATG+TGG - Chr7:89437149-89437168 MsG0780041306.01.T01:intron 45.0%
GGTCCCACATTGAGTAGTAT+GGG + Chr7:89437156-89437175 None:intergenic 45.0%
GTAAAACTGATGCCAAGGAC+TGG - Chr7:89435485-89435504 MsG0780041306.01.T01:intron 45.0%
GTCATGATATCTCCGTCCAT+CGG + Chr7:89435208-89435227 None:intergenic 45.0%
TAAGCCAGGAATTGCCTTTG+TGG - Chr7:89438438-89438457 MsG0780041306.01.T01:intron 45.0%
TACATAGGCGGATCTTCTCA+TGG - Chr7:89436223-89436242 MsG0780041306.01.T01:intron 45.0%
TATCAGATCACTAGAGGTGG+AGG - Chr7:89434654-89434673 MsG0780041306.01.T01:intron 45.0%
TCCCTTAGCTAGCAATCAAG+GGG - Chr7:89436861-89436880 MsG0780041306.01.T01:intron 45.0%
TGCAGAGAATACAGTATGCC+AGG - Chr7:89437343-89437362 MsG0780041306.01.T01:intron 45.0%
TGCTCTTGTCTTGTGATGAC+CGG - Chr7:89435294-89435313 MsG0780041306.01.T01:intron 45.0%
TGGATCAATGGTCAGTCTCA+TGG + Chr7:89435173-89435192 None:intergenic 45.0%
TGGTCCCACATTGAGTAGTA+TGG + Chr7:89437157-89437176 None:intergenic 45.0%
TGTTCAATAAGGGAAGGGGA+GGG + Chr7:89434862-89434881 None:intergenic 45.0%
TGTTCATTGAGTGTAGGGGA+AGG + Chr7:89435394-89435413 None:intergenic 45.0%
TTAGGATGGAGGGTTTAGGA+GGG - Chr7:89435682-89435701 MsG0780041306.01.T01:intron 45.0%
TTATTGGGCACTCAGTGAGT+TGG + Chr7:89437564-89437583 None:intergenic 45.0%
TTCAGCGGGCAAAAAAAGGA+AGG - Chr7:89437897-89437916 MsG0780041306.01.T01:intron 45.0%
TTCCTCGGGAAAAACGAAAG+AGG - Chr7:89437406-89437425 MsG0780041306.01.T01:intron 45.0%
TTGAGTGTAGGGGAAGGATT+TGG + Chr7:89435388-89435407 None:intergenic 45.0%
TTGGTATCACAACTGGTCGT+CGG + Chr7:89437042-89437061 None:intergenic 45.0%
TTGTAAAGAGCTACCGACAG+AGG + Chr7:89437015-89437034 None:intergenic 45.0%
TTTATCCCACTAGATGGGGT+TGG + Chr7:89434790-89434809 None:intergenic 45.0%
! AAGGACTGACTCAGTTCTAG+TGG - Chr7:89434962-89434981 MsG0780041306.01.T01:CDS 45.0%
! AGACGGTACTTTTGTTCCTC+GGG - Chr7:89437392-89437411 MsG0780041306.01.T01:intron 45.0%
! CAGACGGTACTTTTGTTCCT+CGG - Chr7:89437391-89437410 MsG0780041306.01.T01:intron 45.0%
! CAGTCTCATGGCTATGCTTT+TGG + Chr7:89435161-89435180 None:intergenic 45.0%
! CATTTGAAGCATCATGGGAG+TGG + Chr7:89438371-89438390 None:intergenic 45.0%
! GTTTTGCAACCCAGAGTTTC+AGG - Chr7:89436366-89436385 MsG0780041306.01.T01:intron 45.0%
! TCTGTTTAGGAGGGCTTTAG+AGG + Chr7:89435850-89435869 None:intergenic 45.0%
! TGTTGTCGGGGGTTTTTGTT+TGG - Chr7:89437635-89437654 MsG0780041306.01.T01:intron 45.0%
! TTGGTTGCCAAAGGGCTTTT+GGG - Chr7:89437659-89437678 MsG0780041306.01.T01:intron 45.0%
! TTTGAATCACGACTTTGGGG+AGG + Chr7:89436407-89436426 None:intergenic 45.0%
! TTTGGTTGCCAAAGGGCTTT+TGG - Chr7:89437658-89437677 MsG0780041306.01.T01:intron 45.0%
!! CTGTTTAGGAGGGCTTTAGA+GGG + Chr7:89435849-89435868 None:intergenic 45.0%
!! GTTTGGGAATTGGGTTTTGG+AGG + Chr7:89436079-89436098 None:intergenic 45.0%
!! TCGGGGGTTTTTGTTTGGTT+TGG - Chr7:89437640-89437659 MsG0780041306.01.T01:intron 45.0%
!!! GAATTGGGTTTTGGAGGGAA+AGG + Chr7:89436073-89436092 None:intergenic 45.0%
ATCATGGGAGTGGTCTCGTT+GGG + Chr7:89438361-89438380 None:intergenic 50.0%
ATGTAGCCAACCCCATCTAG+TGG - Chr7:89434781-89434800 MsG0780041306.01.T01:intron 50.0%
CATTCTTACGGGATACCCGT+AGG + Chr7:89436106-89436125 None:intergenic 50.0%
CCCCCTTGATTGCTAGCTAA+GGG + Chr7:89436865-89436884 None:intergenic 50.0%
CCCCTTCTATGATAAGCCCA+TGG - Chr7:89434131-89434150 MsG0780041306.01.T01:intron 50.0%
CCCTTAGCTAGCAATCAAGG+GGG - Chr7:89436862-89436881 MsG0780041306.01.T01:intron 50.0%
CCTGCTTATGCTGGTGGTTA+CGG - Chr7:89437958-89437977 MsG0780041306.01.T01:intron 50.0%
CTACGGGTATCCCGTAAGAA+TGG - Chr7:89436104-89436123 MsG0780041306.01.T01:intron 50.0%
CTGTTCAATAAGGGAAGGGG+AGG + Chr7:89434863-89434882 None:intergenic 50.0%
GGATACCCGTAGGCTATGTT+TGG + Chr7:89436096-89436115 None:intergenic 50.0%
GGCCTAAATCCTGCTTATGC+TGG - Chr7:89437949-89437968 MsG0780041306.01.T01:intron 50.0%
GTTAGGATGGAGGGTTTAGG+AGG - Chr7:89435681-89435700 MsG0780041306.01.T01:intron 50.0%
TAGGATGGAGGGTTTAGGAG+GGG - Chr7:89435683-89435702 MsG0780041306.01.T01:intron 50.0%
TAGGCTGATCTTCCGATGGA+CGG - Chr7:89435193-89435212 MsG0780041306.01.T01:intron 50.0%
TCATGACCCCAAAAGCCCTT+TGG + Chr7:89437669-89437688 None:intergenic 50.0%
TCCATAGGCTGATCTTCCGA+TGG - Chr7:89435189-89435208 MsG0780041306.01.T01:intron 50.0%
TCCATCGGAAGATCAGCCTA+TGG + Chr7:89435193-89435212 None:intergenic 50.0%
TCCCCCTTGATTGCTAGCTA+AGG + Chr7:89436866-89436885 None:intergenic 50.0%
TGTAGCCAACCCCATCTAGT+GGG - Chr7:89434782-89434801 MsG0780041306.01.T01:intron 50.0%
TTTGAGGGGGTTCGGGATTA+GGG + Chr7:89433831-89433850 None:intergenic 50.0%
! TGGTTGCCAAAGGGCTTTTG+GGG - Chr7:89437660-89437679 MsG0780041306.01.T01:intron 50.0%
!! TGCCTCTTTCGTTTTTCCCG+AGG + Chr7:89437411-89437430 None:intergenic 50.0%
!! TTTTGAGGGGGTTCGGGATT+AGG + Chr7:89433832-89433851 None:intergenic 50.0%
!!! GGTCATGTTTTGAGGGGGTT+CGG + Chr7:89433839-89433858 None:intergenic 50.0%
!!! GTCATGTTTTGAGGGGGTTC+GGG + Chr7:89433838-89433857 None:intergenic 50.0%
CATCATGGGAGTGGTCTCGT+TGG + Chr7:89438362-89438381 None:intergenic 55.0%
CCGTAACCACCAGCATAAGC+AGG + Chr7:89437961-89437980 None:intergenic 55.0%
CGGTGCAAAGTCCTTACCTG+AGG - Chr7:89438294-89438313 MsG0780041306.01.T01:CDS 55.0%
GAGATTTGGGCAGTATGGGG+TGG + Chr7:89437177-89437196 None:intergenic 55.0%
GAGTAGTATGGGATGCTCGG+TGG + Chr7:89437145-89437164 None:intergenic 55.0%
GCAATCCACAGTGGCTATGC+AGG - Chr7:89438477-89438496 MsG0780041306.01.T01:CDS 55.0%
GGCGGATCTTCTCATGGACA+CGG - Chr7:89436229-89436248 MsG0780041306.01.T01:intron 55.0%
TCCCAGATACCTTATCCGGG+CGG - Chr7:89438274-89438293 MsG0780041306.01.T01:CDS 55.0%
TTTCCGCTCTGCTCCTCTGT+CGG - Chr7:89436999-89437018 MsG0780041306.01.T01:intron 55.0%
! ACCGCCCGGATAAGGTATCT+GGG + Chr7:89438278-89438297 None:intergenic 55.0%
! CGAAAGAGGCACGACGACAA+AGG - Chr7:89437420-89437439 MsG0780041306.01.T01:intron 55.0%
!!! GGGTTTTGGAGGGAAAGGGA+GGG + Chr7:89436068-89436087 None:intergenic 55.0%
!!! GGTTTTGGAGGGAAAGGGAG+GGG + Chr7:89436067-89436086 None:intergenic 55.0%
!!! TGGGTTTTGGAGGGAAAGGG+AGG + Chr7:89436069-89436088 None:intergenic 55.0%
AGTCGTACTCGGCCAGTCCT+TGG + Chr7:89435500-89435519 None:intergenic 60.0%
CTACCGACAGAGGAGCAGAG+CGG + Chr7:89437005-89437024 None:intergenic 60.0%
GACAGAGGAGCAGAGCGGAA+AGG + Chr7:89437000-89437019 None:intergenic 60.0%
GACTTTGCACCGCCCGGATA+AGG + Chr7:89438286-89438305 None:intergenic 60.0%
GGTAAGGACTTTGCACCGCC+CGG + Chr7:89438292-89438311 None:intergenic 60.0%
TGGTGCAGGAGCCTCAGGTA+AGG + Chr7:89438308-89438327 None:intergenic 60.0%
! CACCGCCCGGATAAGGTATC+TGG + Chr7:89438279-89438298 None:intergenic 60.0%
!! TTTGGTGGTGCAGGAGCCTC+AGG + Chr7:89438313-89438332 None:intergenic 60.0%
CAGCGCCTGCATAGCCACTG+TGG + Chr7:89438485-89438504 None:intergenic 65.0%
! GTGGCTATGCAGGCGCTGCA+AGG - Chr7:89438487-89438506 MsG0780041306.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 89433814 89438561 89433814 ID=MsG0780041306.01;Name=MsG0780041306.01
Chr7 mRNA 89433814 89438561 89433814 ID=MsG0780041306.01.T01;Parent=MsG0780041306.01;Name=MsG0780041306.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|241
Chr7 exon 89438477 89438561 89438477 ID=MsG0780041306.01.T01:exon:15654;Parent=MsG0780041306.01.T01
Chr7 exon 89438223 89438395 89438223 ID=MsG0780041306.01.T01:exon:15653;Parent=MsG0780041306.01.T01
Chr7 exon 89434934 89435027 89434934 ID=MsG0780041306.01.T01:exon:15652;Parent=MsG0780041306.01.T01
Chr7 exon 89434382 89434473 89434382 ID=MsG0780041306.01.T01:exon:15651;Parent=MsG0780041306.01.T01
Chr7 exon 89433814 89434095 89433814 ID=MsG0780041306.01.T01:exon:15650;Parent=MsG0780041306.01.T01
Chr7 CDS 89438477 89438561 89438477 ID=MsG0780041306.01.T01:cds;Parent=MsG0780041306.01.T01
Chr7 CDS 89438223 89438395 89438223 ID=MsG0780041306.01.T01:cds;Parent=MsG0780041306.01.T01
Chr7 CDS 89434934 89435027 89434934 ID=MsG0780041306.01.T01:cds;Parent=MsG0780041306.01.T01
Chr7 CDS 89434382 89434473 89434382 ID=MsG0780041306.01.T01:cds;Parent=MsG0780041306.01.T01
Chr7 CDS 89433814 89434095 89433814 ID=MsG0780041306.01.T01:cds;Parent=MsG0780041306.01.T01
Gene Sequence

>MsG0780041306.01.T01

ATGGCTGAAGTTAACCCTAATCCCGAACCCCCTCAAAACATGACCATCTACATCAACAATCTCAACGAAAAAATCAAAATCGACGAGTTGAAGAAATCTTTGCACGCTGTTTTCAGTCAATTTGGGAAGATACTTGAGGTTTTAGCTTTCAAAACTCTGAAACATAAGGGTCAAGCTTGGGTGATTTTTGAGGATGTTACTTCTGCTTCTAATGCTCTTAGGCAAATGCAAGGTTTCCCCTTCTATGATAAGCCCATGAGAATACAGTATGCCAGGACTAAATCTGATGTCATAGCAAAAGCAGACGGTACTTTTGTTCCTCGGGAAAAACGAAAGAGGCACGACGACAAAGCGGGCAAAAAAAGGAAGGACCAAAACGACGCTAATTTAGCTGGAAGTGGCCTAAATCCTGCTTATGCTGGTGGTTACGGTGCTACTCCAGCTATACCTTATCCGGGCGGTGCAAAGTCCTTACCTGAGGCTCCTGCACCACCAAATAATATTCTCTTTATTCAGAATCTTCCCAACGAGACCACTCCCATGATGCTTCAAATGCTGTTTCTTCAATATCCTGGATTCAAGGAAGTTAGAATGGTTGAAGCTAAGCCAGGAATTGCCTTTGTGGAATATGGAGATGAGATGCAATCCACAGTGGCTATGCAGGCGCTGCAAGGTTTCAAGATAGCCCCACAAAACCCTATGTTGATAACTTATGCAAAGAAATAG
Protein sequence

>MsG0780041306.01.T01

MAEVNPNPEPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNALRQMQGFPFYDKPMRIQYARTKSDVIAKADGTFVPREKRKRHDDKAGKKRKDQNDANLAGSGLNPAYAGGYGATPAIPYPGGAKSLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQALQGFKIAPQNPMLITYAKK*