AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033625.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033625.01.T02 MTR_1g014140 98.400 500 8 0 1 500 1 500 0.0 1013
MsG0680033625.01.T02 MTR_5g028360 70.238 504 129 4 1 500 62 548 0.0 698
MsG0680033625.01.T02 MTR_2g036600 25.305 328 226 11 83 400 109 427 1.23e-15 80.1
MsG0680033625.01.T02 MTR_7g101050 29.098 244 153 10 271 500 298 535 3.31e-14 75.5
MsG0680033625.01.T02 MTR_4g127770 23.684 304 206 9 87 378 601 890 1.93e-12 70.5
MsG0680033625.01.T02 MTR_8g007295 24.468 282 180 9 90 368 111 362 6.18e-11 65.1
MsG0680033625.01.T02 MTR_8g007295 24.468 282 180 9 90 368 111 362 7.70e-11 65.1
MsG0680033625.01.T01 MTR_1g014140 98.400 500 8 0 1 500 1 500 0.0 1013
MsG0680033625.01.T01 MTR_5g028360 70.238 504 129 4 1 500 62 548 0.0 698
MsG0680033625.01.T01 MTR_2g036600 25.305 328 226 11 83 400 109 427 1.23e-15 80.1
MsG0680033625.01.T01 MTR_7g101050 29.098 244 153 10 271 500 298 535 3.31e-14 75.5
MsG0680033625.01.T01 MTR_4g127770 23.684 304 206 9 87 378 601 890 1.93e-12 70.5
MsG0680033625.01.T01 MTR_8g007295 24.468 282 180 9 90 368 111 362 6.18e-11 65.1
MsG0680033625.01.T01 MTR_8g007295 24.468 282 180 9 90 368 111 362 7.70e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033625.01.T02 AT4G31180 62.984 516 173 4 3 500 2 517 0.0 654
MsG0680033625.01.T02 AT4G31180 62.984 516 173 4 3 500 2 517 0.0 654
MsG0680033625.01.T02 AT4G26870 64.557 474 162 4 28 500 23 491 0.0 619
MsG0680033625.01.T02 AT5G56680 28.814 236 148 8 278 500 303 531 9.83e-17 83.6
MsG0680033625.01.T02 AT4G17300 23.653 427 231 15 122 497 141 523 9.35e-15 77.4
MsG0680033625.01.T02 AT4G17300 23.653 427 231 15 122 497 161 543 1.05e-14 77.0
MsG0680033625.01.T02 AT3G13490 21.655 411 257 14 94 475 136 510 9.97e-11 64.7
MsG0680033625.01.T01 AT4G31180 62.984 516 173 4 3 500 2 517 0.0 654
MsG0680033625.01.T01 AT4G31180 62.984 516 173 4 3 500 2 517 0.0 654
MsG0680033625.01.T01 AT4G26870 64.557 474 162 4 28 500 23 491 0.0 619
MsG0680033625.01.T01 AT5G56680 28.814 236 148 8 278 500 303 531 9.83e-17 83.6
MsG0680033625.01.T01 AT4G17300 23.653 427 231 15 122 497 141 523 9.35e-15 77.4
MsG0680033625.01.T01 AT4G17300 23.653 427 231 15 122 497 161 543 1.05e-14 77.0
MsG0680033625.01.T01 AT3G13490 21.655 411 257 14 94 475 136 510 9.97e-11 64.7

Find 17 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTATCCTGAGTTTGGGC+TGG 0.346815 6:+69725023 None:intergenic
TTCTATCCTGAGTTTGGGCT+GGG 0.403019 6:+69725024 None:intergenic
GATTTGAAGAAGAACGAGAT+TGG 0.431028 6:-69725996 None:intergenic
ATGAGAGTTTCGGAGAAATG+AGG 0.462622 6:-69725926 None:intergenic
CAACAGAGAAAACGAGAAAG+AGG 0.472805 6:-69725100 None:intergenic
AAGAGCGTGAGGGTAAAATA+AGG 0.486098 6:-69725072 None:intergenic
AAATAAGGATTCAGCGGGAT+AGG 0.487687 6:-69725057 None:intergenic
AAGAGGAGTGGAAGAGCGTG+AGG 0.496414 6:-69725083 None:intergenic
TTCTTCTCTGCGATTCATCA+AGG 0.506469 6:+69725135 MsG0680033625.01.T01:five_prime_UTR
TGAGAGTTTCGGAGAAATGA+GGG 0.508206 6:-69725925 None:intergenic
AAGAAGAACGAGATTGGAGA+TGG 0.527588 6:-69725990 None:intergenic
GGAGTGAGTGATGAGAGTTT+CGG 0.536508 6:-69725936 None:intergenic
GGGTAAAATAAGGATTCAGC+GGG 0.572750 6:-69725062 None:intergenic
AGAGGAGTGGAAGAGCGTGA+GGG 0.588493 6:-69725082 None:intergenic
GAGAAAACGAGAAAGAGGAG+TGG 0.619349 6:-69725095 None:intergenic
AGGGTAAAATAAGGATTCAG+CGG 0.649751 6:-69725063 None:intergenic
ACGAGATTGGAGATGGTGTG+TGG 0.706722 6:-69725983 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAATATTAGAGAAAAT+AGG - Chr6:69727997-69728016 None:intergenic 15.0%
!! ATTATATAAATGTCATTGAA+AGG + Chr6:69729112-69729131 MsG0680033625.01.T01:intron 15.0%
!! ATTCTTAAAGAATCTAAAAA+TGG - Chr6:69726392-69726411 None:intergenic 15.0%
!! TAAATTTAATGTAATGACTT+TGG + Chr6:69726221-69726240 MsG0680033625.01.T01:intron 15.0%
!!! GAGTTTAATTTTATCATATA+TGG - Chr6:69726814-69726833 None:intergenic 15.0%
!!! GATTTTGATTTTGATTATAA+TGG + Chr6:69727497-69727516 MsG0680033625.01.T01:intron 15.0%
!!! TTTGATTGAAAATTTTACAA+TGG + Chr6:69726328-69726347 MsG0680033625.01.T01:intron 15.0%
!! AAATTGATGAAAATGTACTT+GGG + Chr6:69729154-69729173 MsG0680033625.01.T01:intron 20.0%
!! AACCAAATAATGTTTACTAT+TGG + Chr6:69729306-69729325 MsG0680033625.01.T01:intron 20.0%
!! AATAGTAAACATTATTTGGT+TGG - Chr6:69729307-69729326 None:intergenic 20.0%
!! AATGAATATATATACCTGAA+TGG - Chr6:69727651-69727670 None:intergenic 20.0%
!! ACCAAATAATGTTTACTATT+GGG + Chr6:69729307-69729326 MsG0680033625.01.T01:intron 20.0%
!! CTGTAACTATGATATATAAA+TGG + Chr6:69729518-69729537 MsG0680033625.01.T01:intron 20.0%
!! CTTCTTGAATTAAATTGAAA+AGG - Chr6:69729335-69729354 None:intergenic 20.0%
!! GATTAAGAAACATTATTATG+AGG + Chr6:69728400-69728419 MsG0680033625.01.T01:CDS 20.0%
!! TAAATTGATGAAAATGTACT+TGG + Chr6:69729153-69729172 MsG0680033625.01.T01:intron 20.0%
!! TAAGTACTTGAAAATTTACT+TGG + Chr6:69726686-69726705 MsG0680033625.01.T01:intron 20.0%
!! TCAATTACAACATTTCTAAT+CGG - Chr6:69727675-69727694 None:intergenic 20.0%
!! TGTAATTCTATTTATAGGTA+TGG + Chr6:69729760-69729779 MsG0680033625.01.T01:intron 20.0%
!! TTCTTGAAGAAACTAAAAAT+TGG - Chr6:69726121-69726140 None:intergenic 20.0%
!! TTGAAGAAAAAAATTGCAAT+GGG + Chr6:69726643-69726662 MsG0680033625.01.T01:intron 20.0%
!! TTTGAAGAAAAAAATTGCAA+TGG + Chr6:69726642-69726661 MsG0680033625.01.T01:intron 20.0%
!!! AAGGACATATTATTTTTGAT+TGG + Chr6:69729352-69729371 MsG0680033625.01.T01:intron 20.0%
!!! ATTAAGTTGAGATCAATTTT+TGG + Chr6:69726713-69726732 MsG0680033625.01.T01:intron 20.0%
!!! CAATTTATTTGTTTTGTAGT+GGG + Chr6:69728679-69728698 MsG0680033625.01.T01:intron 20.0%
!!! CATTTCTTAAGTTAGTTTAT+CGG - Chr6:69728081-69728100 None:intergenic 20.0%
!!! CTTTTCAATTTAATTCAAGA+AGG + Chr6:69729333-69729352 MsG0680033625.01.T01:intron 20.0%
!!! GTTGTATTTTTTCGTTTATT+GGG + Chr6:69726243-69726262 MsG0680033625.01.T01:intron 20.0%
!!! TCAATTTATTTGTTTTGTAG+TGG + Chr6:69728678-69728697 MsG0680033625.01.T01:intron 20.0%
!!! TCAATTTTACAAAATAGACA+GGG - Chr6:69728955-69728974 None:intergenic 20.0%
!!! TCTATTTTGTAAAATTGAGA+GGG + Chr6:69728957-69728976 MsG0680033625.01.T01:intron 20.0%
!!! TGTTGTTTTGTTTAATATAC+TGG + Chr6:69727801-69727820 MsG0680033625.01.T01:intron 20.0%
!!! TTTTTTCTCTCTTTCATATT+TGG + Chr6:69725268-69725287 MsG0680033625.01.T01:intron 20.0%
! AAACAAATTAACACCTTTAG+GGG - Chr6:69728620-69728639 None:intergenic 25.0%
! AAAGAGAGAAAAAAAATCCA+TGG - Chr6:69725262-69725281 None:intergenic 25.0%
! AATAGTTAGGAACCTAAATA+AGG - Chr6:69729395-69729414 None:intergenic 25.0%
! ACATTATTATGAGGTACATT+TGG + Chr6:69728409-69728428 MsG0680033625.01.T01:intron 25.0%
! AGGAACAAGAAATTGAATAA+AGG - Chr6:69725353-69725372 None:intergenic 25.0%
! AGGATTAGGGAAAATATAAA+AGG - Chr6:69725184-69725203 None:intergenic 25.0%
! ATCAGAAACAAAAAGCAAAA+AGG + Chr6:69726952-69726971 MsG0680033625.01.T01:CDS 25.0%
! ATGATTAGTACCAAAAATGA+TGG - Chr6:69726771-69726790 None:intergenic 25.0%
! ATTTAGTCATTTCATGATGA+TGG + Chr6:69729232-69729251 MsG0680033625.01.T01:intron 25.0%
! CAAACAAATTAACACCTTTA+GGG - Chr6:69728621-69728640 None:intergenic 25.0%
! CTTAAAGAATCTAAAAATGG+AGG - Chr6:69726389-69726408 None:intergenic 25.0%
! GATAAACAAACAAATGTGAT+AGG + Chr6:69728892-69728911 MsG0680033625.01.T01:intron 25.0%
! TATAAGATTAAACTGTACAC+AGG - Chr6:69729012-69729031 None:intergenic 25.0%
! TCCCAATAGTAAACATTATT+TGG - Chr6:69729311-69729330 None:intergenic 25.0%
! TCGACTGTAATTCTATTTAT+AGG + Chr6:69729755-69729774 MsG0680033625.01.T01:intron 25.0%
! TGAAGAAAAAAATTGCAATG+GGG + Chr6:69726644-69726663 MsG0680033625.01.T01:intron 25.0%
! TTGGTACTAATGTAATTTGA+TGG + Chr6:69726732-69726751 MsG0680033625.01.T01:intron 25.0%
! TTTAAACTTCACTACAAGAT+TGG - Chr6:69729062-69729081 None:intergenic 25.0%
! TTTGAACACAAAATGTAAGA+AGG + Chr6:69728559-69728578 MsG0680033625.01.T01:CDS 25.0%
!! AAAATTTTACACTGATGTTG+TGG + Chr6:69726618-69726637 MsG0680033625.01.T01:intron 25.0%
!! AACTTAAGAAATGCATTTTG+CGG + Chr6:69728088-69728107 MsG0680033625.01.T01:intron 25.0%
!! AATGCTTTGTTATGACAATT+TGG + Chr6:69729925-69729944 MsG0680033625.01.T01:intron 25.0%
!! ACTGATACTTTTGTGTTTTT+TGG + Chr6:69728489-69728508 MsG0680033625.01.T01:intron 25.0%
!! AGATCTTTTCGTTTATTATG+TGG + Chr6:69725620-69725639 MsG0680033625.01.T01:intron 25.0%
!! AGTTATAAAAGATTTGAGAC+AGG - Chr6:69729693-69729712 None:intergenic 25.0%
!! CTAAATGAGATCTCATTTTA+TGG - Chr6:69729218-69729237 None:intergenic 25.0%
!! CTATTTTGTAAAATTGAGAG+GGG + Chr6:69728958-69728977 MsG0680033625.01.T01:intron 25.0%
!! CTCAATTTTACAAAATAGAC+AGG - Chr6:69728956-69728975 None:intergenic 25.0%
!! GATTATCTAACCATCATTTT+TGG + Chr6:69726758-69726777 MsG0680033625.01.T01:intron 25.0%
!! GGAATTTTCAAAAAATTGGA+GGG - Chr6:69729286-69729305 None:intergenic 25.0%
!! GGTATTTGTTAAAAGGATTT+AGG + Chr6:69726501-69726520 MsG0680033625.01.T01:intron 25.0%
!! GGTTGGAATTTTCAAAAAAT+TGG - Chr6:69729290-69729309 None:intergenic 25.0%
!! GTCTATTTTGTAAAATTGAG+AGG + Chr6:69728956-69728975 MsG0680033625.01.T01:intron 25.0%
!! GTTATGATATCTTGTTACTT+AGG + Chr6:69727419-69727438 MsG0680033625.01.T01:intron 25.0%
!! GTTGTATTTGTTAGCTTAAT+GGG + Chr6:69726523-69726542 MsG0680033625.01.T01:intron 25.0%
!! TGGAATTTTCAAAAAATTGG+AGG - Chr6:69729287-69729306 None:intergenic 25.0%
!! TTTCTTGTTCCTTTTGAATT+TGG + Chr6:69725361-69725380 MsG0680033625.01.T01:intron 25.0%
!!! AATAAGTATTGAAGAACAAC+TGG + Chr6:69725682-69725701 MsG0680033625.01.T01:intron 25.0%
!!! CTAAAGGTGTTAATTTGTTT+GGG + Chr6:69728620-69728639 MsG0680033625.01.T01:intron 25.0%
!!! GGTTGTATTTTTTCGTTTAT+TGG + Chr6:69726242-69726261 MsG0680033625.01.T01:intron 25.0%
!!! TTGATTATAATGGTGTTATG+TGG + Chr6:69727507-69727526 MsG0680033625.01.T01:intron 25.0%
AAAAACATTTCGACATACTC+AGG - Chr6:69725834-69725853 None:intergenic 30.0%
AAAACATTTCGACATACTCA+GGG - Chr6:69725833-69725852 None:intergenic 30.0%
AAATTCAAAGAACACCACTT+AGG - Chr6:69726295-69726314 None:intergenic 30.0%
AAGTGAAGTTGAAATTGAGA+AGG + Chr6:69727625-69727644 MsG0680033625.01.T01:CDS 30.0%
AATACCATAATTGACAGCAA+GGG - Chr6:69727074-69727093 None:intergenic 30.0%
ACACACATCTTTAATCAGAA+AGG - Chr6:69727777-69727796 None:intergenic 30.0%
ACATTTATCAAACACCTAGT+AGG - Chr6:69726272-69726291 None:intergenic 30.0%
CAAAAGAGTTACTGTAGTTT+GGG - Chr6:69729858-69729877 None:intergenic 30.0%
CATGAAACACCAAATTCAAA+AGG - Chr6:69725373-69725392 None:intergenic 30.0%
CCAAACAAATTAACACCTTT+AGG - Chr6:69728622-69728641 None:intergenic 30.0%
TACAAGAGGAAAAATACCAA+AGG - Chr6:69729429-69729448 None:intergenic 30.0%
TACCATTTGAGCACAAAAAA+CGG - Chr6:69726418-69726437 None:intergenic 30.0%
TCAAAAGAGTTACTGTAGTT+TGG - Chr6:69729859-69729878 None:intergenic 30.0%
TGTTTGATAAATGTCCTAAG+TGG + Chr6:69726278-69726297 MsG0680033625.01.T01:intron 30.0%
TTATGAGTCATTCTTCGATA+TGG + Chr6:69725474-69725493 MsG0680033625.01.T01:intron 30.0%
TTCTTAGTCATCAGAGAAAA+TGG + Chr6:69727241-69727260 MsG0680033625.01.T01:CDS 30.0%
TTTACATCAAGACTCAGAAA+AGG + Chr6:69729485-69729504 MsG0680033625.01.T01:intron 30.0%
TTTGTGAGTTGTGATTGTTT+AGG + Chr6:69727475-69727494 MsG0680033625.01.T01:intron 30.0%
! AAATTGGTTTCTACCAATAG+AGG - Chr6:69726105-69726124 None:intergenic 30.0%
! AAGTTAGTGACACCTTATTT+AGG + Chr6:69729380-69729399 MsG0680033625.01.T01:intron 30.0%
! AATTTCAAGCTTTTACTCCA+TGG + Chr6:69725242-69725261 MsG0680033625.01.T01:intron 30.0%
! ACAGTTTTGCATAGAATAGA+TGG + Chr6:69725424-69725443 MsG0680033625.01.T01:intron 30.0%
! ATGTCAATATGTGGTGATTT+TGG + Chr6:69728284-69728303 MsG0680033625.01.T01:CDS 30.0%
! CATTCTAAGAATCGTGTTAT+TGG + Chr6:69725731-69725750 MsG0680033625.01.T01:intron 30.0%
! GGTTGTATTTGTTAGCTTAA+TGG + Chr6:69726522-69726541 MsG0680033625.01.T01:intron 30.0%
! GTTTTCTCACATTGTTTGTT+TGG + Chr6:69726872-69726891 MsG0680033625.01.T01:intron 30.0%
! TATGGAAGTACAAACACATT+TGG - Chr6:69729993-69730012 None:intergenic 30.0%
! TCTTAAGTTAGTTTATCGGT+AGG - Chr6:69728077-69728096 None:intergenic 30.0%
! TGAATCTTGTTTCTTGAGTT+TGG + Chr6:69726449-69726468 MsG0680033625.01.T01:intron 30.0%
! TGTTTGTTAAGTGTTCTAAG+TGG + Chr6:69726558-69726577 MsG0680033625.01.T01:intron 30.0%
!! ATACTTTTGTGTTTTTTGGC+AGG + Chr6:69728493-69728512 MsG0680033625.01.T01:intron 30.0%
!! ATTTCATGATGATGGTAGTT+TGG + Chr6:69729240-69729259 MsG0680033625.01.T01:intron 30.0%
!! CCTAAAGGTGTTAATTTGTT+TGG + Chr6:69728619-69728638 MsG0680033625.01.T01:intron 30.0%
!! TAGCAAGGCATTGTATAAAA+TGG - Chr6:69729829-69729848 None:intergenic 30.0%
!! TTTCATGATGATGGTAGTTT+GGG + Chr6:69729241-69729260 MsG0680033625.01.T01:intron 30.0%
!! TTTCCTCTTGTAGTTAGTTT+TGG + Chr6:69729437-69729456 MsG0680033625.01.T01:intron 30.0%
!!! ATTACTTTTCTAAAACCAGC+TGG - Chr6:69729669-69729688 None:intergenic 30.0%
!!! GTTGATGGTGATTTTTTAAC+TGG + Chr6:69727846-69727865 MsG0680033625.01.T01:intron 30.0%
!!! TATGTGGTTTTGTTCTCTAT+AGG + Chr6:69727523-69727542 MsG0680033625.01.T01:intron 30.0%
!!! TTCCTCTTGTAGTTAGTTTT+GGG + Chr6:69729438-69729457 MsG0680033625.01.T01:intron 30.0%
AACACTTAACAAACACCTAG+AGG - Chr6:69726553-69726572 None:intergenic 35.0%
AAGTGGAGAAAAGAGGATTA+GGG - Chr6:69725197-69725216 None:intergenic 35.0%
ACACTTAACAAACACCTAGA+GGG - Chr6:69726552-69726571 None:intergenic 35.0%
ACTTGAATACTGAAGCAGAA+AGG + Chr6:69729635-69729654 MsG0680033625.01.T01:CDS 35.0%
AGGGTAAAATAAGGATTCAG+CGG - Chr6:69725066-69725085 None:intergenic 35.0%
AGTATCTTCCAAATACTCTG+CGG + Chr6:69728794-69728813 MsG0680033625.01.T01:intron 35.0%
ATAATTCAAGCTCAGCAAGA+GGG + Chr6:69726839-69726858 MsG0680033625.01.T01:intron 35.0%
ATACCATAATTGACAGCAAG+GGG - Chr6:69727073-69727092 None:intergenic 35.0%
ATGTGTTAATCAACTTCGCA+TGG + Chr6:69725592-69725611 MsG0680033625.01.T01:intron 35.0%
CAAATGTGATAGGATGATGA+TGG + Chr6:69728902-69728921 MsG0680033625.01.T01:intron 35.0%
CAATACCATAATTGACAGCA+AGG - Chr6:69727075-69727094 None:intergenic 35.0%
CACAAGCAAATGTCAATATG+TGG + Chr6:69728275-69728294 MsG0680033625.01.T01:CDS 35.0%
CACATATGACATCATTTCGT+TGG - Chr6:69725577-69725596 None:intergenic 35.0%
CACCATCAACATTCATGTAA+GGG - Chr6:69727836-69727855 None:intergenic 35.0%
CAGAAGATTCCTTTACTCAT+AGG + Chr6:69728339-69728358 MsG0680033625.01.T01:CDS 35.0%
CTATTGTTGAGGAATTCCTT+TGG + Chr6:69729410-69729429 MsG0680033625.01.T01:intron 35.0%
GAAAAAAATTGCAATGGGGT+TGG + Chr6:69726648-69726667 MsG0680033625.01.T01:intron 35.0%
GAAACTGTATTGTGTGAGTA+AGG + Chr6:69727562-69727581 MsG0680033625.01.T01:CDS 35.0%
GAAGATACTGCACATTCATA+GGG - Chr6:69728783-69728802 None:intergenic 35.0%
GACAGGATATGATAAGAGTT+TGG - Chr6:69725783-69725802 None:intergenic 35.0%
GATTTGAAGAAGAACGAGAT+TGG - Chr6:69725999-69726018 None:intergenic 35.0%
GGAATTCCTCAACAATAGTT+AGG - Chr6:69729408-69729427 None:intergenic 35.0%
GTAGATAGAGAAGGATTAAG+AGG + Chr6:69725530-69725549 MsG0680033625.01.T01:intron 35.0%
TAACCTTCGATTTCCTCTAT+TGG + Chr6:69726089-69726108 MsG0680033625.01.T01:intron 35.0%
TACAGGTCTTGATGTTGAAA+TGG + Chr6:69728376-69728395 MsG0680033625.01.T01:CDS 35.0%
TAGGTTCCTAACTATTGTTG+AGG + Chr6:69729399-69729418 MsG0680033625.01.T01:intron 35.0%
TATAATTCAAGCTCAGCAAG+AGG + Chr6:69726838-69726857 MsG0680033625.01.T01:intron 35.0%
TCACCATCAACATTCATGTA+AGG - Chr6:69727837-69727856 None:intergenic 35.0%
TCAGTATTCAAGTCACCAAA+AGG - Chr6:69729628-69729647 None:intergenic 35.0%
TTACATTTCCAACTTGAGAC+TGG - Chr6:69727972-69727991 None:intergenic 35.0%
TTCACGAAAACCAAACTCTT+AGG + Chr6:69725498-69725517 MsG0680033625.01.T01:intron 35.0%
TTTAACAAATACCAGCACAG+AGG - Chr6:69726494-69726513 None:intergenic 35.0%
! CTATTCAATCCTTGTTGCTT+AGG + Chr6:69730049-69730068 MsG0680033625.01.T01:intron 35.0%
! CTGTGCTGGTATTTGTTAAA+AGG + Chr6:69726494-69726513 MsG0680033625.01.T01:intron 35.0%
! GAATCGCAGAGAAGAATTTT+AGG - Chr6:69725131-69725150 None:intergenic 35.0%
! GAGTAATGATTTTGCTTTGC+AGG + Chr6:69729582-69729601 MsG0680033625.01.T01:intron 35.0%
! TAAAATGGTCTTACAGCCAA+CGG - Chr6:69729814-69729833 None:intergenic 35.0%
! TATAGGTTGAAATCCAAGTG+AGG + Chr6:69727540-69727559 MsG0680033625.01.T01:intron 35.0%
! TCACATTGTTTGTTTGGTTC+AGG + Chr6:69726878-69726897 MsG0680033625.01.T01:intron 35.0%
! TCCATAAAGCTGAAGCTTTT+GGG + Chr6:69730007-69730026 MsG0680033625.01.T01:intron 35.0%
! TCTTTTGATGTCTTCATTCG+AGG + Chr6:69729871-69729890 MsG0680033625.01.T01:CDS 35.0%
! TGGAAGTTTAAGCACTGTTA+GGG + Chr6:69728981-69729000 MsG0680033625.01.T01:intron 35.0%
! TGGCTTTCTATTTTCACGAT+CGG + Chr6:69725751-69725770 MsG0680033625.01.T01:intron 35.0%
! TTCCATAAAGCTGAAGCTTT+TGG + Chr6:69730006-69730025 MsG0680033625.01.T01:intron 35.0%
! TTTGCGTTTGAAATTGTCGA+GGG + Chr6:69728452-69728471 MsG0680033625.01.T01:intron 35.0%
! TTTGGTTTACGTTCAATTGC+TGG + Chr6:69725286-69725305 MsG0680033625.01.T01:intron 35.0%
! TTTTGTAAAATTGAGAGGGG+TGG + Chr6:69728961-69728980 MsG0680033625.01.T01:intron 35.0%
!! TTCATGATGATGGTAGTTTG+GGG + Chr6:69729242-69729261 MsG0680033625.01.T01:intron 35.0%
!!! TTCCGTTTTTTGTGCTCAAA+TGG + Chr6:69726413-69726432 MsG0680033625.01.T01:intron 35.0%
!!! TTGTGTTTTTTGGCAGGTTA+TGG + Chr6:69728499-69728518 MsG0680033625.01.T01:intron 35.0%
AAATAAGGATTCAGCGGGAT+AGG - Chr6:69725060-69725079 None:intergenic 40.0%
AAGAAGAACGAGATTGGAGA+TGG - Chr6:69725993-69726012 None:intergenic 40.0%
AAGAGAGAAGTGGAGAAAAG+AGG - Chr6:69725204-69725223 None:intergenic 40.0%
AATCATTGAGAGCCTCAACT+CGG - Chr6:69727150-69727169 None:intergenic 40.0%
ACCCAAAAGCTTCAGCTTTA+TGG - Chr6:69730011-69730030 None:intergenic 40.0%
ACTGAAGCAGAAAGGAAACT+AGG + Chr6:69729643-69729662 MsG0680033625.01.T01:CDS 40.0%
ATCATAACCAACCTGTTGTG+AGG - Chr6:69727407-69727426 None:intergenic 40.0%
ATCATATATGGTGCAGTCAC+TGG - Chr6:69726802-69726821 None:intergenic 40.0%
ATGAGAGTTTCGGAGAAATG+AGG - Chr6:69725929-69725948 None:intergenic 40.0%
ATTAATCGGCAGAGTAGGAA+TGG - Chr6:69727588-69727607 None:intergenic 40.0%
CAACAGAGAAAACGAGAAAG+AGG - Chr6:69725103-69725122 None:intergenic 40.0%
CAACGACTAGTAGATAGAGA+AGG + Chr6:69725521-69725540 MsG0680033625.01.T01:intron 40.0%
CACAATACAGTTTCCTCACT+TGG - Chr6:69727556-69727575 None:intergenic 40.0%
CACCATATCAAAGAGAGAAG+TGG - Chr6:69725214-69725233 None:intergenic 40.0%
CAGAGTTCTATATCCTTCAC+CGG + Chr6:69729785-69729804 MsG0680033625.01.T01:CDS 40.0%
CTACAATCAAGATGAGAGTG+TGG + Chr6:69727709-69727728 MsG0680033625.01.T01:intron 40.0%
CTACCAATAGAGGAAATCGA+AGG - Chr6:69726095-69726114 None:intergenic 40.0%
CTAGATCCAGCAATCAACTT+AGG - Chr6:69728182-69728201 None:intergenic 40.0%
CTCCACTTCTCTCTTTGATA+TGG + Chr6:69725209-69725228 MsG0680033625.01.T01:intron 40.0%
CTCCCAAAACTAACTACAAG+AGG - Chr6:69729443-69729462 None:intergenic 40.0%
CTCCCTTACATGAATGTTGA+TGG + Chr6:69727831-69727850 MsG0680033625.01.T01:intron 40.0%
CTTTCAACTTTCCCTCAGTA+CGG - Chr6:69725652-69725671 None:intergenic 40.0%
GAAAATGTACTTGGGTAGAC+AGG + Chr6:69729162-69729181 MsG0680033625.01.T01:intron 40.0%
GAAGTGGAGAAAAGAGGATT+AGG - Chr6:69725198-69725217 None:intergenic 40.0%
GACAGGGATAAAAGACGTAA+AGG - Chr6:69728939-69728958 None:intergenic 40.0%
GACATTTGCTTGTGAAGTTG+AGG - Chr6:69728269-69728288 None:intergenic 40.0%
GAGGGAAAGTTGAAAGAAGA+TGG + Chr6:69725656-69725675 MsG0680033625.01.T01:intron 40.0%
GCACGTTCTTCCAAAAATTC+AGG - Chr6:69730112-69730131 None:intergenic 40.0%
GCAGCATCCTCGATATTAAT+CGG - Chr6:69727602-69727621 None:intergenic 40.0%
GGAAGATACTGCACATTCAT+AGG - Chr6:69728784-69728803 None:intergenic 40.0%
GGGTAAAATAAGGATTCAGC+GGG - Chr6:69725065-69725084 None:intergenic 40.0%
TCGATATTAATCGGCAGAGT+AGG - Chr6:69727593-69727612 None:intergenic 40.0%
TCTTTAGGCTGGACTACAAA+GGG + Chr6:69728219-69728238 MsG0680033625.01.T01:CDS 40.0%
TGAAATTGAGAAGGCCATTC+AGG + Chr6:69727634-69727653 MsG0680033625.01.T01:CDS 40.0%
TGAGAGTTTCGGAGAAATGA+GGG - Chr6:69725928-69725947 None:intergenic 40.0%
TTAGGCGAGGAGATAATATC+AGG + Chr6:69730067-69730086 MsG0680033625.01.T01:intron 40.0%
TTCTTCTCTGCGATTCATCA+AGG + Chr6:69725135-69725154 MsG0680033625.01.T01:five_prime_UTR 40.0%
TTGATTGCTGGATCTAGTGA+GGG + Chr6:69728185-69728204 MsG0680033625.01.T01:CDS 40.0%
! AAAATGGTCTTACAGCCAAC+GGG - Chr6:69729813-69729832 None:intergenic 40.0%
! AACACCTTTAGGGGTTCAAA+CGG - Chr6:69728611-69728630 None:intergenic 40.0%
! AAGAGCGTGAGGGTAAAATA+AGG - Chr6:69725075-69725094 None:intergenic 40.0%
! ACAACTTGTTCGTGTGAATC+AGG + Chr6:69727882-69727901 MsG0680033625.01.T01:CDS 40.0%
! ACACATTTGGAGAAGCATGA+TGG - Chr6:69729980-69729999 None:intergenic 40.0%
! ATGCATTTTGCGGTGTGATA+CGG + Chr6:69728098-69728117 MsG0680033625.01.T01:intron 40.0%
! CTTTCTCGTTTTCTCTGTTG+CGG + Chr6:69725103-69725122 MsG0680033625.01.T01:five_prime_UTR 40.0%
! GAATCTTCTGCTCTAAACAC+GGG - Chr6:69728329-69728348 None:intergenic 40.0%
! GATTTTGCTTTGCAGGAAGT+TGG + Chr6:69729589-69729608 MsG0680033625.01.T01:intron 40.0%
! GGAATCTTCTGCTCTAAACA+CGG - Chr6:69728330-69728349 None:intergenic 40.0%
! GGAGTAGAGATTGAACCTTT+TGG + Chr6:69729610-69729629 MsG0680033625.01.T01:CDS 40.0%
! GGCTTTCTATTTTCACGATC+GGG + Chr6:69725752-69725771 MsG0680033625.01.T01:intron 40.0%
! GTGGAAGTTTAAGCACTGTT+AGG + Chr6:69728980-69728999 MsG0680033625.01.T01:intron 40.0%
! GTTGCTGCTTGTAAGTTTGT+TGG + Chr6:69728043-69728062 MsG0680033625.01.T01:intron 40.0%
! GTTTGCGTTTGAAATTGTCG+AGG + Chr6:69728451-69728470 MsG0680033625.01.T01:intron 40.0%
! TACTCTGCCGATTAATATCG+AGG + Chr6:69727592-69727611 MsG0680033625.01.T01:CDS 40.0%
! TATCCACGTGCCTGAATTTT+TGG + Chr6:69730099-69730118 MsG0680033625.01.T01:CDS 40.0%
! TATGTAAGCCGCAGAGTATT+TGG - Chr6:69728805-69728824 None:intergenic 40.0%
! TGTTGTGAGGCACCTTTAAT+AGG - Chr6:69727394-69727413 None:intergenic 40.0%
! TTTTCACAGTTGTCAGCACT+TGG - Chr6:69725900-69725919 None:intergenic 40.0%
!! AGAAGGTATTCAGATGCTCA+AGG + Chr6:69728828-69728847 MsG0680033625.01.T01:CDS 40.0%
!! ATGTGATAGGATGATGATGG+CGG + Chr6:69728905-69728924 MsG0680033625.01.T01:intron 40.0%
!! CGGAAAATTCCTTGATTTGC+TGG - Chr6:69727946-69727965 None:intergenic 40.0%
!! CTGCTTACATCGATTCTTTC+AGG + Chr6:69730164-69730183 MsG0680033625.01.T01:CDS 40.0%
!! TAGTTTGGGTTGTCATAGCA+AGG - Chr6:69729844-69729863 None:intergenic 40.0%
!! TATTAAAGGTGCCTCACAAC+AGG + Chr6:69727393-69727412 MsG0680033625.01.T01:CDS 40.0%
!!! ATTTTTTAACTGGTGCAGGC+TGG + Chr6:69727856-69727875 MsG0680033625.01.T01:intron 40.0%
!!! GGTGATTTTTTAACTGGTGC+AGG + Chr6:69727852-69727871 MsG0680033625.01.T01:intron 40.0%
!!! TTTGGCCGTGTTTTTGAGAT+TGG + Chr6:69728302-69728321 MsG0680033625.01.T01:CDS 40.0%
AAGCAAAAAGGCCTCCAAGA+AGG + Chr6:69726964-69726983 MsG0680033625.01.T01:CDS 45.0%
ATCATTGAGAGCCTCAACTC+GGG - Chr6:69727149-69727168 None:intergenic 45.0%
ATCTGCGGACTCACTAAATC+AGG - Chr6:69727298-69727317 None:intergenic 45.0%
ATTCCAGCCGCTCCTATTAA+AGG + Chr6:69727379-69727398 MsG0680033625.01.T01:CDS 45.0%
ATTGCAATGGGGTTGGAATG+AGG + Chr6:69726655-69726674 MsG0680033625.01.T01:intron 45.0%
CACAAGCTATTCGACCAGTT+GGG + Chr6:69727206-69727225 MsG0680033625.01.T01:CDS 45.0%
CAGCAATCAACTTAGGAGTG+TGG - Chr6:69728175-69728194 None:intergenic 45.0%
CGACATCGACAATAGACTCA+CGG - Chr6:69727345-69727364 None:intergenic 45.0%
CGGGACCAATCTCAAAAACA+CGG - Chr6:69728310-69728329 None:intergenic 45.0%
CTAGTCGTTGCCTAAGAGTT+TGG - Chr6:69725511-69725530 None:intergenic 45.0%
CTGCGGCTTACATATGAAGA+AGG + Chr6:69728811-69728830 MsG0680033625.01.T01:CDS 45.0%
CTTCCAAAAATTCAGGCACG+TGG - Chr6:69730105-69730124 None:intergenic 45.0%
GAGAAAACGAGAAAGAGGAG+TGG - Chr6:69725098-69725117 None:intergenic 45.0%
GAGTCTATTGTCGATGTCGA+AGG + Chr6:69727346-69727365 MsG0680033625.01.T01:CDS 45.0%
GCACAGATGCCTATGAGTAA+AGG - Chr6:69728351-69728370 None:intergenic 45.0%
GGAGTGAGTGATGAGAGTTT+CGG - Chr6:69725939-69725958 None:intergenic 45.0%
GGCGAAGAAGAAAAAGAACG+CGG - Chr6:69725965-69725984 None:intergenic 45.0%
GTCTTTAGGCTGGACTACAA+AGG + Chr6:69728218-69728237 MsG0680033625.01.T01:CDS 45.0%
GTTGATTGCTGGATCTAGTG+AGG + Chr6:69728184-69728203 MsG0680033625.01.T01:CDS 45.0%
GTTTCTGATCCTTCCGATGA+CGG - Chr6:69726941-69726960 None:intergenic 45.0%
TAAGAAGGATCTCGAAGCTG+TGG + Chr6:69728574-69728593 MsG0680033625.01.T01:CDS 45.0%
TATTGTCGATGTCGAAGGTG+TGG + Chr6:69727351-69727370 MsG0680033625.01.T01:CDS 45.0%
TCATTACTCGCTGCAAGACA+AGG - Chr6:69729571-69729590 None:intergenic 45.0%
TCCAGTCGTTGACATTGACA+GGG - Chr6:69727126-69727145 None:intergenic 45.0%
TGAGGCTCTCAATGATTCAC+TGG + Chr6:69727153-69727172 MsG0680033625.01.T01:CDS 45.0%
TGATTCACTGGAGAACAAGC+CGG + Chr6:69727165-69727184 MsG0680033625.01.T01:CDS 45.0%
TGATTTAGTGAGTCCGCAGA+TGG + Chr6:69727297-69727316 MsG0680033625.01.T01:CDS 45.0%
TTCCAACTTGAGACTGGATG+CGG - Chr6:69727966-69727985 None:intergenic 45.0%
TTCGATTGGAGCTCAATGAG+CGG - Chr6:69727100-69727119 None:intergenic 45.0%
TTGCAATGGGGTTGGAATGA+GGG + Chr6:69726656-69726675 MsG0680033625.01.T01:intron 45.0%
TTTAATAGGAGCGGCTGGAA+TGG - Chr6:69727380-69727399 None:intergenic 45.0%
! ACACCTTTAGGGGTTCAAAC+GGG - Chr6:69728610-69728629 None:intergenic 45.0%
! CGTTTATTGGGTTGCCTACT+AGG + Chr6:69726255-69726274 MsG0680033625.01.T01:intron 45.0%
! GATCCCCTTGCTGTCAATTA+TGG + Chr6:69727067-69727086 MsG0680033625.01.T01:CDS 45.0%
! TGAGGCACCTTTAATAGGAG+CGG - Chr6:69727389-69727408 None:intergenic 45.0%
!! CACACTCCTAAGTTGATTGC+TGG + Chr6:69728173-69728192 MsG0680033625.01.T01:CDS 45.0%
!! AAGATAAAAAAAAAAAAAAA+TGG - Chr6:69725314-69725333 None:intergenic 5.0%
AACGCCATCTTCTTCCCAAC+TGG - Chr6:69727223-69727242 None:intergenic 50.0%
AATAGACTCACGGCTGAGAG+CGG - Chr6:69727335-69727354 None:intergenic 50.0%
ACGAGATTGGAGATGGTGTG+TGG - Chr6:69725986-69726005 None:intergenic 50.0%
AGAAAGGAAACTAGGCCAGC+TGG + Chr6:69729651-69729670 MsG0680033625.01.T01:CDS 50.0%
AGAAGAAAAAGAACGCGGCG+AGG - Chr6:69725960-69725979 None:intergenic 50.0%
AGAGAGAGTCGATGTAGCAG+AGG - Chr6:69727038-69727057 None:intergenic 50.0%
AGGCATCTGTGCGAGTTTAC+AGG + Chr6:69728359-69728378 MsG0680033625.01.T01:CDS 50.0%
ATCTCCTCGCCTAAGCAACA+AGG - Chr6:69730061-69730080 None:intergenic 50.0%
ATTGCTGGATCTAGTGAGGG+TGG + Chr6:69728188-69728207 MsG0680033625.01.T01:CDS 50.0%
CATACTCAGGGTGCGTTTGA+TGG - Chr6:69725821-69725840 None:intergenic 50.0%
CATTGACAGGGGTCTTCGAT+TGG - Chr6:69727114-69727133 None:intergenic 50.0%
CCAGTCGTTGACATTGACAG+GGG - Chr6:69727125-69727144 None:intergenic 50.0%
CTGCGAACACCAGCAAATCA+AGG + Chr6:69727934-69727953 MsG0680033625.01.T01:CDS 50.0%
GAAGAACGTGCACAAGCTTG+CGG + Chr6:69730121-69730140 MsG0680033625.01.T01:CDS 50.0%
GCACAAGCTATTCGACCAGT+TGG + Chr6:69727205-69727224 MsG0680033625.01.T01:CDS 50.0%
GCGGCAAATTTCACCATCTG+CGG - Chr6:69727313-69727332 None:intergenic 50.0%
GGTCAGGATAGGATAGAGAC+AGG - Chr6:69725800-69725819 None:intergenic 50.0%
GTACCCGTTTGAACCCCTAA+AGG + Chr6:69728604-69728623 MsG0680033625.01.T01:CDS 50.0%
GTCCAGTCGTTGACATTGAC+AGG - Chr6:69727127-69727146 None:intergenic 50.0%
TCAACTTTCCCTCAGTACGG+AGG - Chr6:69725649-69725668 None:intergenic 50.0%
TCGACCAGTTGGGAAGAAGA+TGG + Chr6:69727216-69727235 MsG0680033625.01.T01:CDS 50.0%
TCGATTGGAGCTCAATGAGC+GGG - Chr6:69727099-69727118 None:intergenic 50.0%
TGGTTTCACCGTACAGTGCT+TGG + Chr6:69727261-69727280 MsG0680033625.01.T01:CDS 50.0%
TTCCGCATCCAGTCTCAAGT+TGG + Chr6:69727961-69727980 MsG0680033625.01.T01:CDS 50.0%
TTGCGGTGTGATACGGTGTT+GGG + Chr6:69728105-69728124 MsG0680033625.01.T01:intron 50.0%
TTTGCGGTGTGATACGGTGT+TGG + Chr6:69728104-69728123 MsG0680033625.01.T01:intron 50.0%
! AACAAGCCGGTTCTAATCCG+TGG + Chr6:69727178-69727197 MsG0680033625.01.T01:CDS 50.0%
! ACAAGCCGGTTCTAATCCGT+GGG + Chr6:69727179-69727198 MsG0680033625.01.T01:CDS 50.0%
! CAATCCTTGTTGCTTAGGCG+AGG + Chr6:69730054-69730073 MsG0680033625.01.T01:intron 50.0%
! GTGCGTTTGATGGTCAGGAT+AGG - Chr6:69725811-69725830 None:intergenic 50.0%
! TGCCTGAACCAAGCACTGTA+CGG - Chr6:69727272-69727291 None:intergenic 50.0%
!! AAAGGTGCCTCACAACAGGT+TGG + Chr6:69727397-69727416 MsG0680033625.01.T01:intron 50.0%
!! AGCTTAATGGGTTGCCCTCT+AGG + Chr6:69726535-69726554 MsG0680033625.01.T01:intron 50.0%
!! CTTGATTTGCTGGTGTTCGC+AGG - Chr6:69727936-69727955 None:intergenic 50.0%
!!! GCGTTGCTTTTCCAGCTTTG+CGG - Chr6:69726993-69727012 None:intergenic 50.0%
AGGGTGGAGCTGCTGTCTTT+AGG + Chr6:69728204-69728223 MsG0680033625.01.T01:CDS 55.0%
AGTCGATGTAGCAGAGGTGG+CGG - Chr6:69727032-69727051 None:intergenic 55.0%
ATGTGGTCTCCTCCGTACTG+AGG + Chr6:69725637-69725656 MsG0680033625.01.T01:intron 55.0%
CAAGAAGGATGCCGCAAAGC+TGG + Chr6:69726979-69726998 MsG0680033625.01.T01:CDS 55.0%
CACCGTACAGTGCTTGGTTC+AGG + Chr6:69727267-69727286 MsG0680033625.01.T01:CDS 55.0%
CAGCTTTGCGGCATCCTTCT+TGG - Chr6:69726981-69727000 None:intergenic 55.0%
CCCCTGTCAATGTCAACGAC+TGG + Chr6:69727122-69727141 MsG0680033625.01.T01:CDS 55.0%
CTTTGCGGCATCCTTCTTGG+AGG - Chr6:69726978-69726997 None:intergenic 55.0%
GAAGTTGAGGTGACTGAGCC+AGG - Chr6:69728256-69728275 None:intergenic 55.0%
GAGAGTCGATGTAGCAGAGG+TGG - Chr6:69727035-69727054 None:intergenic 55.0%
GCACCTTTAATAGGAGCGGC+TGG - Chr6:69727385-69727404 None:intergenic 55.0%
GTCTTACAGCCAACGGGTAC+CGG - Chr6:69729807-69729826 None:intergenic 55.0%
GTGATGTGATGCCTCTGTGC+TGG + Chr6:69726480-69726499 MsG0680033625.01.T01:intron 55.0%
TATCCTTCACCGGTACCCGT+TGG + Chr6:69729795-69729814 MsG0680033625.01.T01:CDS 55.0%
TCAAGAGCCGACACCGTCAT+CGG + Chr6:69726925-69726944 MsG0680033625.01.T01:CDS 55.0%
TGCACAAGCTTGCGGCATTG+AGG + Chr6:69730129-69730148 MsG0680033625.01.T01:CDS 55.0%
TGGAGCTGCTGTCTTTAGGC+TGG + Chr6:69728208-69728227 MsG0680033625.01.T01:CDS 55.0%
TGTGGTCTCCTCCGTACTGA+GGG + Chr6:69725638-69725657 MsG0680033625.01.T01:intron 55.0%
! AAGAGGAGTGGAAGAGCGTG+AGG - Chr6:69725086-69725105 None:intergenic 55.0%
! AGAGGAGTGGAAGAGCGTGA+GGG - Chr6:69725085-69725104 None:intergenic 55.0%
! GAATAGCTTGTGCCCTCCCA+CGG - Chr6:69727198-69727217 None:intergenic 55.0%
! GATCCTTCCGATGACGGTGT+CGG - Chr6:69726935-69726954 None:intergenic 55.0%
! GGTGTGATACGGTGTTGGGT+AGG + Chr6:69728109-69728128 MsG0680033625.01.T01:intron 55.0%
! TCAGGGTGCGTTTGATGGTC+AGG - Chr6:69725816-69725835 None:intergenic 55.0%
CAAAGGGCAACCTGCATGCC+TGG + Chr6:69728235-69728254 MsG0680033625.01.T01:CDS 60.0%
CAACGACTGGACCCGAGTTG+AGG + Chr6:69727135-69727154 MsG0680033625.01.T01:CDS 60.0%
! AGCCGGTTCTAATCCGTGGG+AGG + Chr6:69727182-69727201 MsG0680033625.01.T01:CDS 60.0%
! GCCGGTTCTAATCCGTGGGA+GGG + Chr6:69727183-69727202 MsG0680033625.01.T01:CDS 60.0%
!! GCCCTCCCACGGATTAGAAC+CGG - Chr6:69727187-69727206 None:intergenic 60.0%
AGACTCACGGCTGAGAGCGG+CGG - Chr6:69727332-69727351 None:intergenic 65.0%
GAGCCGACACCGTCATCGGA+AGG + Chr6:69726929-69726948 MsG0680033625.01.T01:CDS 65.0%
GGTGACTGAGCCAGGCATGC+AGG - Chr6:69728248-69728267 None:intergenic 65.0%
! AGGTGGCGGCGGCAACTTCT+CGG - Chr6:69727018-69727037 None:intergenic 65.0%
! CGATGTAGCAGAGGTGGCGG+CGG - Chr6:69727029-69727048 None:intergenic 65.0%
!! CAGCCAACGGGTACCGGTGA+AGG - Chr6:69729801-69729820 None:intergenic 65.0%
TGGCGGCGGCAACTTCTCGG+CGG - Chr6:69727015-69727034 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 69725033 69730189 69725033 ID=MsG0680033625.01;Name=MsG0680033625.01
Chr6 mRNA 69725033 69730189 69725033 ID=MsG0680033625.01.T01;Parent=MsG0680033625.01;Name=MsG0680033625.01.T01;_AED=0.47;_eAED=0.47;_QI=132|1|0.9|1|0.88|0.8|10|0|500
Chr6 exon 69725033 69725156 69725033 ID=MsG0680033625.01.T01:exon:2180;Parent=MsG0680033625.01.T01
Chr6 five_prime_UTR 69725033 69725156 69725033 ID=MsG0680033625.01.T01:five_prime_utr;Parent=MsG0680033625.01.T01
Chr6 five_prime_UTR 69726900 69726907 69726900 ID=MsG0680033625.01.T01:five_prime_utr;Parent=MsG0680033625.01.T01
Chr6 CDS 69726908 69727414 69726908 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69727545 69727655 69727545 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69727874 69727987 69727874 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69728131 69728421 69728131 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69728515 69728625 69728515 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69728796 69728849 69728796 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69729604 69729683 69729604 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69729777 69729892 69729777 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 CDS 69730071 69730189 69730071 ID=MsG0680033625.01.T01:cds;Parent=MsG0680033625.01.T01
Chr6 mRNA 69725910 69730189 69725910 ID=MsG0680033625.01.T02;Parent=MsG0680033625.01;Name=MsG0680033625.01.T02;_AED=0.47;_eAED=0.47;_QI=119|1|0.9|1|0.88|0.8|10|0|500
Chr6 exon 69725910 69726020 69725910 ID=MsG0680033625.01.T02:exon:2190;Parent=MsG0680033625.01.T02
Chr6 five_prime_UTR 69725910 69726020 69725910 ID=MsG0680033625.01.T02:five_prime_utr;Parent=MsG0680033625.01.T02
Chr6 five_prime_UTR 69726900 69726907 69726900 ID=MsG0680033625.01.T02:five_prime_utr;Parent=MsG0680033625.01.T02
Chr6 CDS 69726908 69727414 69726908 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69727545 69727655 69727545 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69727874 69727987 69727874 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69728131 69728421 69728131 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69728515 69728625 69728515 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69728796 69728849 69728796 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69729604 69729683 69729604 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69729777 69729892 69729777 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Chr6 CDS 69730071 69730189 69730071 ID=MsG0680033625.01.T02:cds;Parent=MsG0680033625.01.T02
Gene Sequence

>MsG0680033625.01.T02

ATGTCAACTTCAGAATCTCAAGAGCCGACACCGTCATCGGAAGGATCAGAAACAAAAAGCAAAAAGGCCTCCAAGAAGGATGCCGCAAAGCTGGAAAAGCAACGCCGCCGAGAAGTTGCCGCCGCCACCTCTGCTACATCGACTCTCTCTGTCGAAGATGATCCCCTTGCTGTCAATTATGGTATTGTCCCGCTCATTGAGCTCCAATCGAAGACCCCTGTCAATGTCAACGACTGGACCCGAGTTGAGGCTCTCAATGATTCACTGGAGAACAAGCCGGTTCTAATCCGTGGGAGGGCACAAGCTATTCGACCAGTTGGGAAGAAGATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTCAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCGCATCCAGTCTCAAGTTGGAAATGCGTTCAGACAATTTTTATTAGCTGAAAGCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCCGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTATGGAACAGAGTTCTATATCCTTCACCGGTACCCGTTGGCTGTAAGACCATTTTATACAATGCCTTGCTATGACAACCCAAACTACAGTAACTCTTTTGATGTCTTCATTCGAGGCGAGGAGATAATATCAGGAGCTCAGCGTATCCACGTGCCTGAATTTTTGGAAGAACGTGCACAAGCTTGCGGCATTGAGGTCAAGACAATATCTGCTTACATCGATTCTTTCAGGTAA

>MsG0680033625.01.T01

ATGTCAACTTCAGAATCTCAAGAGCCGACACCGTCATCGGAAGGATCAGAAACAAAAAGCAAAAAGGCCTCCAAGAAGGATGCCGCAAAGCTGGAAAAGCAACGCCGCCGAGAAGTTGCCGCCGCCACCTCTGCTACATCGACTCTCTCTGTCGAAGATGATCCCCTTGCTGTCAATTATGGTATTGTCCCGCTCATTGAGCTCCAATCGAAGACCCCTGTCAATGTCAACGACTGGACCCGAGTTGAGGCTCTCAATGATTCACTGGAGAACAAGCCGGTTCTAATCCGTGGGAGGGCACAAGCTATTCGACCAGTTGGGAAGAAGATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTCAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCGCATCCAGTCTCAAGTTGGAAATGCGTTCAGACAATTTTTATTAGCTGAAAGCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCCGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTATGGAACAGAGTTCTATATCCTTCACCGGTACCCGTTGGCTGTAAGACCATTTTATACAATGCCTTGCTATGACAACCCAAACTACAGTAACTCTTTTGATGTCTTCATTCGAGGCGAGGAGATAATATCAGGAGCTCAGCGTATCCACGTGCCTGAATTTTTGGAAGAACGTGCACAAGCTTGCGGCATTGAGGTCAAGACAATATCTGCTTACATCGATTCTTTCAGGTAA
Protein sequence

>MsG0680033625.01.T02

MSTSESQEPTPSSEGSETKSKKASKKDAAKLEKQRRREVAAATSATSTLSVEDDPLAVNYGIVPLIELQSKTPVNVNDWTRVEALNDSLENKPVLIRGRAQAIRPVGKKMAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFRIQSQVGNAFRQFLLAESFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPNYSNSFDVFIRGEEIISGAQRIHVPEFLEERAQACGIEVKTISAYIDSFR*

>MsG0680033625.01.T01

MSTSESQEPTPSSEGSETKSKKASKKDAAKLEKQRRREVAAATSATSTLSVEDDPLAVNYGIVPLIELQSKTPVNVNDWTRVEALNDSLENKPVLIRGRAQAIRPVGKKMAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFRIQSQVGNAFRQFLLAESFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPNYSNSFDVFIRGEEIISGAQRIHVPEFLEERAQACGIEVKTISAYIDSFR*