Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046433.01.T01 | XP_003609033.1 | 85.46 | 337 | 14 | 1 | 9 | 310 | 248 | 584 | 0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046433.01.T01 | Q8L4D8 | 43.544 | 333 | 152 | 11 | 9 | 310 | 260 | 587 | 2.07E-51 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046433.01.T01 | G7JQW4 | 85.460 | 337 | 14 | 1 | 9 | 310 | 247 | 583 | 0.0 | 566 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001719.01 | MsG0880046433.01 | 0.835114 | 2.025761e-56 | 2.453066e-53 |
| MsG0880045879.01 | MsG0880046433.01 | 0.823035 | 1.719968e-53 | 1.464314e-50 |
| MsG0880046432.01 | MsG0880046433.01 | 0.814131 | 1.801397e-51 | 1.198675e-48 |
| MsG0180003412.01 | MsG0880046433.01 | 0.810194 | 1.301483e-50 | 7.794440e-48 |
| MsG0180005655.01 | MsG0880046433.01 | 0.824675 | 7.096462e-54 | 6.329757e-51 |
| MsG0780041008.01 | MsG0880046433.01 | 0.800330 | 1.515990e-48 | 7.039790e-46 |
| MsG0880042986.01 | MsG0880046433.01 | 0.865430 | 5.941527e-65 | 1.932324e-61 |
| MsG0380014544.01 | MsG0880046433.01 | 0.802627 | 5.129346e-49 | 2.524707e-46 |
| MsG0480020366.01 | MsG0880046433.01 | 0.835012 | 2.149203e-56 | 2.594739e-53 |
| MsG0480020937.01 | MsG0880046433.01 | 0.814207 | 1.732727e-51 | 1.155342e-48 |
| MsG0480021902.01 | MsG0880046433.01 | 0.824952 | 6.106999e-54 | 5.490222e-51 |
| MsG0480022378.01 | MsG0880046433.01 | 0.828313 | 9.634706e-55 | 9.541450e-52 |
| MsG0480023275.01 | MsG0880046433.01 | 0.810848 | 9.396630e-51 | 5.726736e-48 |
| MsG0480023312.01 | MsG0880046433.01 | 0.808730 | 2.682778e-50 | 1.545604e-47 |
| MsG0580024276.01 | MsG0880046433.01 | 0.810169 | 1.317396e-50 | 7.885107e-48 |
| MsG0380015340.01 | MsG0880046433.01 | 0.826675 | 2.382306e-54 | 2.249257e-51 |
| MsG0380015954.01 | MsG0880046433.01 | 0.810943 | 8.964433e-51 | 5.477393e-48 |
| MsG0380017150.01 | MsG0880046433.01 | 0.804718 | 1.888412e-49 | 9.807772e-47 |
| MsG0280006909.01 | MsG0880046433.01 | 0.822247 | 2.624001e-53 | 2.184338e-50 |
| MsG0280010352.01 | MsG0880046433.01 | 0.800949 | 1.133579e-48 | 5.347338e-46 |
| MsG0780038736.01 | MsG0880046433.01 | 0.814605 | 1.415240e-51 | 9.538992e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046433.01.T01 | MTR_4g108140 | 85.460 | 337 | 14 | 1 | 9 | 310 | 247 | 583 | 0.0 | 566 |
| MsG0880046433.01.T01 | MTR_4g108140 | 85.460 | 337 | 14 | 1 | 9 | 310 | 248 | 584 | 0.0 | 566 |
| MsG0880046433.01.T01 | MTR_5g038620 | 49.107 | 112 | 55 | 1 | 201 | 310 | 614 | 725 | 4.19e-20 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046433.01.T01 | AT1G74690 | 43.544 | 333 | 152 | 11 | 9 | 310 | 260 | 587 | 2.11e-52 | 181 |
| MsG0880046433.01.T01 | AT1G18840 | 42.073 | 328 | 153 | 14 | 9 | 310 | 256 | 572 | 2.47e-48 | 170 |
| MsG0880046433.01.T01 | AT1G18840 | 42.073 | 328 | 153 | 14 | 9 | 310 | 256 | 572 | 2.47e-48 | 170 |
| MsG0880046433.01.T01 | AT1G18840 | 42.073 | 328 | 153 | 14 | 9 | 310 | 256 | 572 | 2.47e-48 | 170 |
| MsG0880046433.01.T01 | AT2G02790 | 41.401 | 157 | 88 | 3 | 158 | 310 | 441 | 597 | 3.06e-24 | 103 |
| MsG0880046433.01.T01 | AT2G02790 | 41.401 | 157 | 88 | 3 | 158 | 310 | 441 | 597 | 3.06e-24 | 103 |
| MsG0880046433.01.T01 | AT1G14380 | 30.056 | 356 | 191 | 14 | 1 | 310 | 231 | 574 | 3.02e-22 | 97.4 |
| MsG0880046433.01.T01 | AT2G02790 | 40.940 | 149 | 84 | 3 | 158 | 302 | 441 | 589 | 1.85e-21 | 95.1 |
| MsG0880046433.01.T01 | AT1G14380 | 29.443 | 377 | 194 | 14 | 1 | 310 | 231 | 602 | 1.55e-19 | 89.4 |
| MsG0880046433.01.T01 | AT1G14380 | 29.443 | 377 | 194 | 14 | 1 | 310 | 231 | 602 | 1.55e-19 | 89.4 |
| MsG0880046433.01.T01 | AT1G14380 | 29.443 | 377 | 194 | 14 | 1 | 310 | 231 | 602 | 1.55e-19 | 89.4 |
| MsG0880046433.01.T01 | AT1G14380 | 35.556 | 180 | 97 | 7 | 137 | 310 | 498 | 664 | 6.44e-17 | 81.6 |
| MsG0880046433.01.T01 | AT1G14380 | 35.556 | 180 | 97 | 7 | 137 | 310 | 498 | 664 | 6.44e-17 | 81.6 |
| MsG0880046433.01.T01 | AT1G14380 | 35.556 | 180 | 97 | 7 | 137 | 310 | 498 | 664 | 6.44e-17 | 81.6 |
Find 66 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGTCTCTTCTAAATCTT+TGG | 0.164446 | 8:-73336594 | None:intergenic |
| ATTTCAGGGTTTGCTTGTGC+TGG | 0.273773 | 8:-73336148 | None:intergenic |
| CTTCCATCTTGTACGACTTT+TGG | 0.286258 | 8:-73336824 | None:intergenic |
| GCTGGTCAGCATGTCGGTTT+TGG | 0.307481 | 8:+73335988 | None:intergenic |
| AATTTCCTTGCGTTTCGTTT+TGG | 0.330220 | 8:-73336178 | None:intergenic |
| TGAGATTCCAAAGCCTCATT+TGG | 0.338407 | 8:+73336324 | MsG0880046433.01.T01:CDS |
| GGTTTGCTTGTGCTGGGGCT+AGG | 0.348635 | 8:-73336141 | None:intergenic |
| TTTCAGGGTTTGCTTGTGCT+GGG | 0.354870 | 8:-73336147 | None:intergenic |
| TCCGACGATACCAAGTTATA+TGG | 0.373995 | 8:+73336757 | MsG0880046433.01.T01:CDS |
| TTCCTTTCTGACCATTTCAT+TGG | 0.381888 | 8:-73336401 | None:intergenic |
| GGAACTGCAGCTTCAACAAC+TGG | 0.388236 | 8:-73336286 | None:intergenic |
| ACAGTCTCTTCTAAATCTTT+GGG | 0.399625 | 8:-73336593 | None:intergenic |
| TGCTGTTAGTTGAAGATGGC+AGG | 0.407732 | 8:-73336877 | None:intergenic |
| ACACAGAGACCAGTTCATTC+AGG | 0.415046 | 8:+73336923 | MsG0880046433.01.T01:CDS |
| CAGTTCATTCAGGTGGTAAA+GGG | 0.417415 | 8:+73336933 | MsG0880046433.01.T01:CDS |
| AAGCAGGGTAATATTTCAAC+TGG | 0.419215 | 8:+73336058 | MsG0880046433.01.T01:CDS |
| ATTCCCAACCCAAGAAAATC+CGG | 0.422393 | 8:+73336017 | MsG0880046433.01.T01:CDS |
| CCAACCCTCAGATCCTTTGC+TGG | 0.428090 | 8:+73336207 | MsG0880046433.01.T01:CDS |
| CCAGTTCATTCAGGTGGTAA+AGG | 0.435174 | 8:+73336932 | MsG0880046433.01.T01:CDS |
| GGTCATTAGTTCCAATGAAA+TGG | 0.435488 | 8:+73336390 | MsG0880046433.01.T01:CDS |
| TCCAAAGCCTCATTTGGAAA+AGG | 0.453121 | 8:+73336330 | MsG0880046433.01.T01:CDS |
| AACCTCAACTGGAGCTAAGC+AGG | 0.486487 | 8:+73336706 | MsG0880046433.01.T01:CDS |
| CCTGTGGGTACGTTTAGACT+TGG | 0.491203 | 8:-73336095 | None:intergenic |
| TCAGTTGCTGCCATATAACT+TGG | 0.495488 | 8:-73336767 | None:intergenic |
| ATCTGCCAAGGCAAAATTGA+GGG | 0.504867 | 8:+73336790 | MsG0880046433.01.T01:CDS |
| GAAAATTCTCACTTAACAAA+CGG | 0.505003 | 8:+73336626 | MsG0880046433.01.T01:CDS |
| CCTTTACCACCTGAATGAAC+TGG | 0.505962 | 8:-73336932 | None:intergenic |
| AAGCAGGAACGTGCAGAGAA+TGG | 0.508732 | 8:+73336722 | MsG0880046433.01.T01:CDS |
| TGAACTGGTCTCTGTGTCCT+AGG | 0.511569 | 8:-73336917 | None:intergenic |
| GCCATATAACTTGGTATCGT+CGG | 0.514618 | 8:-73336758 | None:intergenic |
| AATCACAAGGAAGATCAAAC+AGG | 0.515319 | 8:+73336656 | MsG0880046433.01.T01:CDS |
| GAAAGGTAGTTCAAGCAGAA+TGG | 0.521415 | 8:+73337438 | MsG0880046433.01.T01:CDS |
| TCTTCTTCTAGAGATGGAAA+TGG | 0.527477 | 8:+73336980 | MsG0880046433.01.T01:CDS |
| TTACTTGTAATATCTGTCAA+AGG | 0.531696 | 8:-73336533 | None:intergenic |
| TAGTTCAAGCAGAATGGAAG+AGG | 0.532628 | 8:+73337444 | MsG0880046433.01.T01:CDS |
| CCAGCAAAGGATCTGAGGGT+TGG | 0.534674 | 8:-73336207 | None:intergenic |
| TTCAGGGTTTGCTTGTGCTG+GGG | 0.535737 | 8:-73336146 | None:intergenic |
| GCAGTATCTTCTTCTAGAGA+TGG | 0.536198 | 8:+73336974 | MsG0880046433.01.T01:CDS |
| AGTGTTGGTGTTTCAGAACA+AGG | 0.547511 | 8:+73336367 | MsG0880046433.01.T01:CDS |
| AAAGGATCTGAGGGTTGGCT+AGG | 0.547702 | 8:-73336202 | None:intergenic |
| ATCTCAGATTCAACTTCTGA+CGG | 0.550258 | 8:-73336307 | None:intergenic |
| AATCTGCCAAGGCAAAATTG+AGG | 0.553435 | 8:+73336789 | MsG0880046433.01.T01:CDS |
| ACCTTCTCAAGCTCAATCTG+TGG | 0.557585 | 8:-73336235 | None:intergenic |
| TTCCTGCTTAGCTCCAGTTG+AGG | 0.558184 | 8:-73336708 | None:intergenic |
| AAGGCAAAATTGAGGGCTCA+AGG | 0.562761 | 8:+73336797 | MsG0880046433.01.T01:CDS |
| TCACCAAAAGTCGTACAAGA+TGG | 0.566333 | 8:+73336821 | MsG0880046433.01.T01:CDS |
| GAAACAGTTGCCTCAAGTGT+TGG | 0.566616 | 8:+73336352 | MsG0880046433.01.T01:CDS |
| TTCTGAAACACCAACACTTG+AGG | 0.567359 | 8:-73336362 | None:intergenic |
| TTGCAGTAGGAAGCTTCCTG+TGG | 0.578038 | 8:-73336111 | None:intergenic |
| TCCACAGATTGAGCTTGAGA+AGG | 0.582817 | 8:+73336234 | MsG0880046433.01.T01:CDS |
| GTGTTGGTGTTTCAGAACAA+GGG | 0.584151 | 8:+73336368 | MsG0880046433.01.T01:CDS |
| TTCCCAACCCAAGAAAATCC+GGG | 0.584450 | 8:+73336018 | MsG0880046433.01.T01:CDS |
| GCTGTTAGTTGAAGATGGCA+GGG | 0.593744 | 8:-73336876 | None:intergenic |
| GGTTAAACGTAACTTGCGAA+AGG | 0.597673 | 8:+73336255 | MsG0880046433.01.T01:CDS |
| AAACAGTTATCAGGTGAATG+TGG | 0.598436 | 8:+73336502 | MsG0880046433.01.T01:intron |
| TGTTGGTGTTTCAGAACAAG+GGG | 0.614686 | 8:+73336369 | MsG0880046433.01.T01:CDS |
| GCTAGGTCAAAATTTGCAGT+AGG | 0.616714 | 8:-73336124 | None:intergenic |
| TGCAGTAGGAAGCTTCCTGT+GGG | 0.618293 | 8:-73336110 | None:intergenic |
| GGCAGCAACTGAATCTGCCA+AGG | 0.626694 | 8:+73336778 | MsG0880046433.01.T01:CDS |
| AGTTCATTCAGGTGGTAAAG+GGG | 0.630964 | 8:+73336934 | MsG0880046433.01.T01:CDS |
| AAATCAGTTCGCATTCACCT+AGG | 0.645810 | 8:+73336900 | MsG0880046433.01.T01:CDS |
| CCAAGTCTAAACGTACCCAC+AGG | 0.666876 | 8:+73336095 | MsG0880046433.01.T01:CDS |
| GAACTGCAGCTTCAACAACT+GGG | 0.667414 | 8:-73336285 | None:intergenic |
| AAACGGAGATTTGAATCACA+AGG | 0.671822 | 8:+73336643 | MsG0880046433.01.T01:CDS |
| GTTCATTCAGGTGGTAAAGG+GGG | 0.677817 | 8:+73336935 | MsG0880046433.01.T01:CDS |
| CAGAGACCAGTTCATTCAGG+TGG | 0.680292 | 8:+73336926 | MsG0880046433.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTACATTCAAATAACAATA+CGG | + | Chr8:73337228-73337247 | MsG0880046433.01.T01:intron | 20.0% |
| !!! | ATATTTTCAAAGCACTTTTT+TGG | - | Chr8:73337040-73337059 | None:intergenic | 20.0% |
| !!! | TATTCTATCAAGTTGTTTTA+CGG | - | Chr8:73337267-73337286 | None:intergenic | 20.0% |
| ! | AAATCCATGTTTGTTTATTC+TGG | + | Chr8:73337350-73337369 | MsG0880046433.01.T01:intron | 25.0% |
| ! | ATACATATTGTTTAGAAAGG+AGG | - | Chr8:73337168-73337187 | None:intergenic | 25.0% |
| ! | CAGTAAAAATATCAACTTAG+TGG | + | Chr8:73337110-73337129 | MsG0880046433.01.T01:intron | 25.0% |
| ! | CTCATACATATTGTTTAGAA+AGG | - | Chr8:73337171-73337190 | None:intergenic | 25.0% |
| ! | GAAAATTCTCACTTAACAAA+CGG | + | Chr8:73336626-73336645 | MsG0880046433.01.T01:CDS | 25.0% |
| ! | TTACTTGTAATATCTGTCAA+AGG | - | Chr8:73336536-73336555 | None:intergenic | 25.0% |
| ! | TTTGTCATACTTATGAAACA+AGG | - | Chr8:73337140-73337159 | None:intergenic | 25.0% |
| !!! | GTCATTTTTACGTGATATTA+TGG | - | Chr8:73337086-73337105 | None:intergenic | 25.0% |
| !!! | GTTTTGGTTTTTCAATTTCA+GGG | - | Chr8:73336165-73336184 | None:intergenic | 25.0% |
| !!! | TTCGTTTTTAACTTCATCAT+CGG | - | Chr8:73336573-73336592 | None:intergenic | 25.0% |
| AACAGTCTCTTCTAAATCTT+TGG | - | Chr8:73336597-73336616 | None:intergenic | 30.0% | |
| ACAGTCTCTTCTAAATCTTT+GGG | - | Chr8:73336596-73336615 | None:intergenic | 30.0% | |
| ACCTTAGTAACTAAATCTCT+AGG | - | Chr8:73336469-73336488 | None:intergenic | 30.0% | |
| TCCTAGAGATTTAGTTACTA+AGG | + | Chr8:73336465-73336484 | MsG0880046433.01.T01:intron | 30.0% | |
| TTTCTCCAAAATTTGATTGC+AGG | + | Chr8:73337195-73337214 | MsG0880046433.01.T01:intron | 30.0% | |
| ! | GGTGTGATATTTTCTTTTTC+AGG | - | Chr8:73337065-73337084 | None:intergenic | 30.0% |
| ! | TTGAACCTGCAATCAAATTT+TGG | - | Chr8:73337203-73337222 | None:intergenic | 30.0% |
| !!! | ATTTTGCTGTTAGTTGAAGA+TGG | - | Chr8:73336884-73336903 | None:intergenic | 30.0% |
| !!! | CGTTTTGGTTTTTCAATTTC+AGG | - | Chr8:73336166-73336185 | None:intergenic | 30.0% |
| AAAAACCAAAACGAAACGCA+AGG | + | Chr8:73336173-73336192 | MsG0880046433.01.T01:CDS | 35.0% | |
| AAACAGTTATCAGGTGAATG+TGG | + | Chr8:73336502-73336521 | MsG0880046433.01.T01:intron | 35.0% | |
| AAACGGAGATTTGAATCACA+AGG | + | Chr8:73336643-73336662 | MsG0880046433.01.T01:CDS | 35.0% | |
| AACTATTCCGTTATTCTTGC+AGG | + | Chr8:73337416-73337435 | MsG0880046433.01.T01:intron | 35.0% | |
| AAGCAGGGTAATATTTCAAC+TGG | + | Chr8:73336058-73336077 | MsG0880046433.01.T01:CDS | 35.0% | |
| AATCACAAGGAAGATCAAAC+AGG | + | Chr8:73336656-73336675 | MsG0880046433.01.T01:CDS | 35.0% | |
| ACATTCACCTGATAACTGTT+TGG | - | Chr8:73336503-73336522 | None:intergenic | 35.0% | |
| ACTAAGTCTCAGAAAAAGCA+GGG | + | Chr8:73336043-73336062 | MsG0880046433.01.T01:CDS | 35.0% | |
| ATCTCAGATTCAACTTCTGA+CGG | - | Chr8:73336310-73336329 | None:intergenic | 35.0% | |
| GGTCATTAGTTCCAATGAAA+TGG | + | Chr8:73336390-73336409 | MsG0880046433.01.T01:CDS | 35.0% | |
| TACCTTTCCTGCAAGAATAA+CGG | - | Chr8:73337426-73337445 | None:intergenic | 35.0% | |
| TACGCCAGAATAAACAAACA+TGG | - | Chr8:73337357-73337376 | None:intergenic | 35.0% | |
| TACTAAGTCTCAGAAAAAGC+AGG | + | Chr8:73336042-73336061 | MsG0880046433.01.T01:CDS | 35.0% | |
| TTCCAATGAAATGGTCAGAA+AGG | + | Chr8:73336399-73336418 | MsG0880046433.01.T01:intron | 35.0% | |
| TTCCTTTCTGACCATTTCAT+TGG | - | Chr8:73336404-73336423 | None:intergenic | 35.0% | |
| ! | AATTTCCTTGCGTTTCGTTT+TGG | - | Chr8:73336181-73336200 | None:intergenic | 35.0% |
| ! | ACTGTTTCCTTTTCCAAATG+AGG | - | Chr8:73336340-73336359 | None:intergenic | 35.0% |
| ! | TCTTCTTCTAGAGATGGAAA+TGG | + | Chr8:73336980-73336999 | MsG0880046433.01.T01:CDS | 35.0% |
| ! | TGGTGAATTTTCTATGCAGA+AGG | - | Chr8:73337020-73337039 | None:intergenic | 35.0% |
| ! | TTAGTATCCCGGATTTTCTT+GGG | - | Chr8:73336028-73336047 | None:intergenic | 35.0% |
| !! | GTAACTAAATCTCTAGGACT+AGG | - | Chr8:73336463-73336482 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGACTTAGTATCC+CGG | - | Chr8:73336039-73336058 | None:intergenic | 35.0% |
| AAATCAGTTCGCATTCACCT+AGG | + | Chr8:73336900-73336919 | MsG0880046433.01.T01:CDS | 40.0% | |
| AATCTGCCAAGGCAAAATTG+AGG | + | Chr8:73336789-73336808 | MsG0880046433.01.T01:CDS | 40.0% | |
| AGTTCATTCAGGTGGTAAAG+GGG | + | Chr8:73336934-73336953 | MsG0880046433.01.T01:CDS | 40.0% | |
| ATCTGCCAAGGCAAAATTGA+GGG | + | Chr8:73336790-73336809 | MsG0880046433.01.T01:CDS | 40.0% | |
| ATTCCCAACCCAAGAAAATC+CGG | + | Chr8:73336017-73336036 | MsG0880046433.01.T01:CDS | 40.0% | |
| CAGTTCATTCAGGTGGTAAA+GGG | + | Chr8:73336933-73336952 | MsG0880046433.01.T01:CDS | 40.0% | |
| GAAAGGTAGTTCAAGCAGAA+TGG | + | Chr8:73337438-73337457 | MsG0880046433.01.T01:CDS | 40.0% | |
| GCCATATAACTTGGTATCGT+CGG | - | Chr8:73336761-73336780 | None:intergenic | 40.0% | |
| GCTAGGTCAAAATTTGCAGT+AGG | - | Chr8:73336127-73336146 | None:intergenic | 40.0% | |
| GTGAGAAAAACAACAGTGCT+CGG | + | Chr8:73336846-73336865 | MsG0880046433.01.T01:CDS | 40.0% | |
| TAGTTCAAGCAGAATGGAAG+AGG | + | Chr8:73337444-73337463 | MsG0880046433.01.T01:CDS | 40.0% | |
| TCACCAAAAGTCGTACAAGA+TGG | + | Chr8:73336821-73336840 | MsG0880046433.01.T01:CDS | 40.0% | |
| TCAGTTGCTGCCATATAACT+TGG | - | Chr8:73336770-73336789 | None:intergenic | 40.0% | |
| TCCAAAGCCTCATTTGGAAA+AGG | + | Chr8:73336330-73336349 | MsG0880046433.01.T01:CDS | 40.0% | |
| TCCGACGATACCAAGTTATA+TGG | + | Chr8:73336757-73336776 | MsG0880046433.01.T01:CDS | 40.0% | |
| TGACACTCCAAACAGTTATC+AGG | + | Chr8:73336493-73336512 | MsG0880046433.01.T01:intron | 40.0% | |
| TGAGATTCCAAAGCCTCATT+TGG | + | Chr8:73336324-73336343 | MsG0880046433.01.T01:CDS | 40.0% | |
| TTCCGTTATTCTTGCAGGAA+AGG | + | Chr8:73337421-73337440 | MsG0880046433.01.T01:intron | 40.0% | |
| ! | ATCTGTGGATTTTCCAGCAA+AGG | - | Chr8:73336223-73336242 | None:intergenic | 40.0% |
| ! | ATTTTCCAGCAAAGGATCTG+AGG | - | Chr8:73336215-73336234 | None:intergenic | 40.0% |
| ! | CTTAGTATCCCGGATTTTCT+TGG | - | Chr8:73336029-73336048 | None:intergenic | 40.0% |
| ! | CTTCCATCTTGTACGACTTT+TGG | - | Chr8:73336827-73336846 | None:intergenic | 40.0% |
| ! | GCAGTATCTTCTTCTAGAGA+TGG | + | Chr8:73336974-73336993 | MsG0880046433.01.T01:CDS | 40.0% |
| ! | GGTTAAACGTAACTTGCGAA+AGG | + | Chr8:73336255-73336274 | MsG0880046433.01.T01:CDS | 40.0% |
| ! | GTGTTGGTGTTTCAGAACAA+GGG | + | Chr8:73336368-73336387 | MsG0880046433.01.T01:CDS | 40.0% |
| ! | TAGCTCCAGTTGAGGTTTTT+CGG | - | Chr8:73336703-73336722 | None:intergenic | 40.0% |
| ! | TCCTTTTCCAAATGAGGCTT+TGG | - | Chr8:73336334-73336353 | None:intergenic | 40.0% |
| ! | TGTTGGTGTTTCAGAACAAG+GGG | + | Chr8:73336369-73336388 | MsG0880046433.01.T01:CDS | 40.0% |
| ! | TTTTCCAGCAAAGGATCTGA+GGG | - | Chr8:73336214-73336233 | None:intergenic | 40.0% |
| !! | AGTGTTGGTGTTTCAGAACA+AGG | + | Chr8:73336367-73336386 | MsG0880046433.01.T01:CDS | 40.0% |
| !! | TTCTGAAACACCAACACTTG+AGG | - | Chr8:73336365-73336384 | None:intergenic | 40.0% |
| !!! | GATTTTCTTGGGTTGGGAAT+TGG | - | Chr8:73336017-73336036 | None:intergenic | 40.0% |
| AAGGCAAAATTGAGGGCTCA+AGG | + | Chr8:73336797-73336816 | MsG0880046433.01.T01:CDS | 45.0% | |
| ACACAGAGACCAGTTCATTC+AGG | + | Chr8:73336923-73336942 | MsG0880046433.01.T01:CDS | 45.0% | |
| ACCTTCTCAAGCTCAATCTG+TGG | - | Chr8:73336238-73336257 | None:intergenic | 45.0% | |
| CCAGTTCATTCAGGTGGTAA+AGG | + | Chr8:73336932-73336951 | MsG0880046433.01.T01:CDS | 45.0% | |
| CCTTTACCACCTGAATGAAC+TGG | - | Chr8:73336935-73336954 | None:intergenic | 45.0% | |
| CTAGGAGTAATTCCCATCTC+TGG | - | Chr8:73336445-73336464 | None:intergenic | 45.0% | |
| GAAACAGTTGCCTCAAGTGT+TGG | + | Chr8:73336352-73336371 | MsG0880046433.01.T01:CDS | 45.0% | |
| GAACTGCAGCTTCAACAACT+GGG | - | Chr8:73336288-73336307 | None:intergenic | 45.0% | |
| GCTGTTAGTTGAAGATGGCA+GGG | - | Chr8:73336879-73336898 | None:intergenic | 45.0% | |
| GTTCATTCAGGTGGTAAAGG+GGG | + | Chr8:73336935-73336954 | MsG0880046433.01.T01:CDS | 45.0% | |
| TCCACAGATTGAGCTTGAGA+AGG | + | Chr8:73336234-73336253 | MsG0880046433.01.T01:CDS | 45.0% | |
| TGCTGTTAGTTGAAGATGGC+AGG | - | Chr8:73336880-73336899 | None:intergenic | 45.0% | |
| TTAACCAGTGAGCCAGAGAT+GGG | + | Chr8:73336430-73336449 | MsG0880046433.01.T01:intron | 45.0% | |
| TTCCCAACCCAAGAAAATCC+GGG | + | Chr8:73336018-73336037 | MsG0880046433.01.T01:CDS | 45.0% | |
| ! | AGCTCCAGTTGAGGTTTTTC+GGG | - | Chr8:73336702-73336721 | None:intergenic | 45.0% |
| ! | ATCCCGGATTTTCTTGGGTT+GGG | - | Chr8:73336023-73336042 | None:intergenic | 45.0% |
| ! | ATTTCAGGGTTTGCTTGTGC+TGG | - | Chr8:73336151-73336170 | None:intergenic | 45.0% |
| ! | TATCCCGGATTTTCTTGGGT+TGG | - | Chr8:73336024-73336043 | None:intergenic | 45.0% |
| ! | TTGAGCCCTCAATTTTGCCT+TGG | - | Chr8:73336798-73336817 | None:intergenic | 45.0% |
| ! | TTTCAGGGTTTGCTTGTGCT+GGG | - | Chr8:73336150-73336169 | None:intergenic | 45.0% |
| !!! | AGGTTTTTCGGGTTGGTTTC+TGG | - | Chr8:73336691-73336710 | None:intergenic | 45.0% |
| AACCTCAACTGGAGCTAAGC+AGG | + | Chr8:73336706-73336725 | MsG0880046433.01.T01:CDS | 50.0% | |
| AAGCAGGAACGTGCAGAGAA+TGG | + | Chr8:73336722-73336741 | MsG0880046433.01.T01:CDS | 50.0% | |
| CAGAGACCAGTTCATTCAGG+TGG | + | Chr8:73336926-73336945 | MsG0880046433.01.T01:CDS | 50.0% | |
| CCAACCCGAAAAACCTCAAC+TGG | + | Chr8:73336695-73336714 | MsG0880046433.01.T01:CDS | 50.0% | |
| CCAAGTCTAAACGTACCCAC+AGG | + | Chr8:73336095-73336114 | MsG0880046433.01.T01:CDS | 50.0% | |
| CCTGTGGGTACGTTTAGACT+TGG | - | Chr8:73336098-73336117 | None:intergenic | 50.0% | |
| GGAACTGCAGCTTCAACAAC+TGG | - | Chr8:73336289-73336308 | None:intergenic | 50.0% | |
| GTTAACCAGTGAGCCAGAGA+TGG | + | Chr8:73336429-73336448 | MsG0880046433.01.T01:intron | 50.0% | |
| TGCAGTAGGAAGCTTCCTGT+GGG | - | Chr8:73336113-73336132 | None:intergenic | 50.0% | |
| TTCCTGCTTAGCTCCAGTTG+AGG | - | Chr8:73336711-73336730 | None:intergenic | 50.0% | |
| TTGCAGTAGGAAGCTTCCTG+TGG | - | Chr8:73336114-73336133 | None:intergenic | 50.0% | |
| ! | AATTCCCATCTCTGGCTCAC+TGG | - | Chr8:73336437-73336456 | None:intergenic | 50.0% |
| ! | TGAACTGGTCTCTGTGTCCT+AGG | - | Chr8:73336920-73336939 | None:intergenic | 50.0% |
| ! | TTCAGGGTTTGCTTGTGCTG+GGG | - | Chr8:73336149-73336168 | None:intergenic | 50.0% |
| !! | AAAGGATCTGAGGGTTGGCT+AGG | - | Chr8:73336205-73336224 | None:intergenic | 50.0% |
| !!! | CCAGTTGAGGTTTTTCGGGT+TGG | - | Chr8:73336698-73336717 | None:intergenic | 50.0% |
| CCAACCCTCAGATCCTTTGC+TGG | + | Chr8:73336207-73336226 | MsG0880046433.01.T01:CDS | 55.0% | |
| CCAGCAAAGGATCTGAGGGT+TGG | - | Chr8:73336210-73336229 | None:intergenic | 55.0% | |
| GGCAGCAACTGAATCTGCCA+AGG | + | Chr8:73336778-73336797 | MsG0880046433.01.T01:CDS | 55.0% | |
| ! | GGTTTGCTTGTGCTGGGGCT+AGG | - | Chr8:73336144-73336163 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 73335998 | 73337469 | 73335998 | ID=MsG0880046433.01;Name=MsG0880046433.01 |
| Chr8 | mRNA | 73335998 | 73337469 | 73335998 | ID=MsG0880046433.01.T01;Parent=MsG0880046433.01;Name=MsG0880046433.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0.5|0.33|3|0|310 |
| Chr8 | exon | 73335998 | 73336411 | 73335998 | ID=MsG0880046433.01.T01:exon:1029;Parent=MsG0880046433.01.T01 |
| Chr8 | exon | 73336515 | 73337001 | 73336515 | ID=MsG0880046433.01.T01:exon:1030;Parent=MsG0880046433.01.T01 |
| Chr8 | exon | 73337438 | 73337469 | 73337438 | ID=MsG0880046433.01.T01:exon:1031;Parent=MsG0880046433.01.T01 |
| Chr8 | CDS | 73335998 | 73336411 | 73335998 | ID=MsG0880046433.01.T01:cds;Parent=MsG0880046433.01.T01 |
| Chr8 | CDS | 73336515 | 73337001 | 73336515 | ID=MsG0880046433.01.T01:cds;Parent=MsG0880046433.01.T01 |
| Chr8 | CDS | 73337438 | 73337469 | 73337438 | ID=MsG0880046433.01.T01:cds;Parent=MsG0880046433.01.T01 |
| Gene Sequence |
| Protein sequence |
