Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020366.01.T01 | XP_003605947.1 | 96.979 | 331 | 10 | 0 | 4 | 334 | 208 | 538 | 0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020366.01.T01 | Q00624 | 54.985 | 331 | 144 | 3 | 1 | 327 | 211 | 540 | 7.33E-123 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020366.01.T01 | G7JDL2 | 96.979 | 331 | 10 | 0 | 4 | 334 | 208 | 538 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0480020366.01 | 0.806458 | 8.145292e-50 | 4.423499e-47 |
| MsG0080048258.01 | MsG0480020366.01 | 0.825912 | 3.618796e-54 | 3.343482e-51 |
| MsG0080048781.01 | MsG0480020366.01 | 0.809948 | 1.470320e-50 | 8.749853e-48 |
| MsG0080048797.01 | MsG0480020366.01 | 0.804176 | 2.449588e-49 | 1.254521e-46 |
| MsG0180001293.01 | MsG0480020366.01 | 0.842216 | 2.960224e-58 | 4.456929e-55 |
| MsG0180001588.01 | MsG0480020366.01 | 0.804979 | 1.665465e-49 | 8.708162e-47 |
| MsG0180001719.01 | MsG0480020366.01 | 0.828942 | 6.792288e-55 | 6.850466e-52 |
| MsG0180002281.01 | MsG0480020366.01 | 0.808911 | 2.453632e-50 | 1.420400e-47 |
| MsG0180002397.01 | MsG0480020366.01 | 0.815834 | 7.547055e-52 | 5.259830e-49 |
| MsG0180003698.01 | MsG0480020366.01 | 0.817552 | 3.108146e-52 | 2.270577e-49 |
| MsG0180003857.01 | MsG0480020366.01 | 0.818226 | 2.188954e-52 | 1.628898e-49 |
| MsG0180003905.01 | MsG0480020366.01 | 0.807480 | 4.951736e-50 | 2.761074e-47 |
| MsG0180004102.01 | MsG0480020366.01 | 0.818215 | 2.201511e-52 | 1.637781e-49 |
| MsG0180004120.01 | MsG0480020366.01 | 0.858052 | 1.073190e-62 | 2.703735e-59 |
| MsG0180004538.01 | MsG0480020366.01 | 0.814876 | 1.232291e-51 | 8.366377e-49 |
| MsG0180004583.01 | MsG0480020366.01 | 0.852473 | 4.512829e-61 | 9.439656e-58 |
| MsG0180005048.01 | MsG0480020366.01 | 0.807673 | 4.506108e-50 | 2.525167e-47 |
| MsG0180005553.01 | MsG0480020366.01 | 0.805310 | 1.419834e-49 | 7.487019e-47 |
| MsG0180005633.01 | MsG0480020366.01 | 0.827208 | 1.775673e-54 | 1.702863e-51 |
| MsG0180005655.01 | MsG0480020366.01 | 0.817862 | 2.645943e-52 | 1.949454e-49 |
| MsG0180006062.01 | MsG0480020366.01 | 0.832661 | 8.321272e-56 | 9.363307e-53 |
| MsG0180006133.01 | MsG0480020366.01 | 0.833820 | 4.281701e-56 | 4.988104e-53 |
| MsG0380013636.01 | MsG0480020366.01 | 0.812070 | 5.099724e-51 | 3.210390e-48 |
| MsG0380014542.01 | MsG0480020366.01 | 0.825401 | 4.783518e-54 | 4.355463e-51 |
| MsG0380014544.01 | MsG0480020366.01 | 0.830583 | 2.706081e-55 | 2.863065e-52 |
| MsG0380014666.01 | MsG0480020366.01 | 0.840998 | 6.201059e-58 | 8.987080e-55 |
| MsG0480018526.01 | MsG0480020366.01 | 0.815408 | 9.386308e-52 | 6.466067e-49 |
| MsG0480020365.01 | MsG0480020366.01 | 0.821483 | 3.942937e-53 | 3.211777e-50 |
| MsG0480020366.01 | MsG0480020398.01 | 0.826372 | 2.812172e-54 | 2.632513e-51 |
| MsG0480020366.01 | MsG0480020856.01 | 0.822266 | 2.596309e-53 | 2.162523e-50 |
| MsG0480020366.01 | MsG0480020937.01 | 0.834665 | 2.628288e-56 | 3.140022e-53 |
| MsG0480020366.01 | MsG0480021100.01 | 0.803613 | 3.206931e-49 | 1.618814e-46 |
| MsG0480020366.01 | MsG0480021456.01 | 0.825470 | 4.607277e-54 | 4.203059e-51 |
| MsG0480020366.01 | MsG0480021773.01 | 0.838353 | 3.023890e-57 | 4.039567e-54 |
| MsG0480020366.01 | MsG0480021902.01 | 0.852917 | 3.370204e-61 | 7.153675e-58 |
| MsG0480020366.01 | MsG0480022307.01 | 0.819590 | 1.072026e-52 | 8.284926e-50 |
| MsG0480020366.01 | MsG0480022320.01 | 0.845654 | 3.549928e-59 | 5.957788e-56 |
| MsG0480020366.01 | MsG0480022378.01 | 0.835097 | 2.046425e-56 | 2.476672e-53 |
| MsG0480020366.01 | MsG0480022559.01 | 0.820981 | 5.144980e-53 | 4.133375e-50 |
| MsG0480020366.01 | MsG0480022682.01 | 0.800041 | 1.735443e-48 | 7.999666e-46 |
| MsG0480020366.01 | MsG0480022784.01 | 0.828201 | 1.025531e-54 | 1.012343e-51 |
| MsG0480020366.01 | MsG0480023003.01 | 0.808528 | 2.963781e-50 | 1.698612e-47 |
| MsG0480020366.01 | MsG0480023414.01 | 0.801970 | 7.003904e-49 | 3.389991e-46 |
| MsG0480020366.01 | MsG0480023424.01 | 0.824411 | 8.189817e-54 | 7.248098e-51 |
| MsG0480020366.01 | MsG0480023426.01 | 0.823614 | 1.260000e-53 | 1.090326e-50 |
| MsG0480020366.01 | MsG0480023626.01 | 0.838798 | 2.321495e-57 | 3.143750e-54 |
| MsG0480020366.01 | MsG0480023706.01 | 0.840164 | 1.025126e-57 | 1.448035e-54 |
| MsG0480020366.01 | MsG0480024019.01 | 0.806727 | 7.149436e-50 | 3.909295e-47 |
| MsG0480020366.01 | MsG0580024276.01 | 0.852600 | 4.150533e-61 | 8.717745e-58 |
| MsG0480020366.01 | MsG0580024748.01 | 0.807164 | 5.776703e-50 | 3.194708e-47 |
| MsG0480020366.01 | MsG0580024787.01 | 0.809398 | 1.929580e-50 | 1.131749e-47 |
| MsG0480020366.01 | MsG0580024954.01 | 0.844703 | 6.416007e-59 | 1.044442e-55 |
| MsG0480020366.01 | MsG0580025186.01 | 0.813553 | 2.414448e-51 | 1.581704e-48 |
| MsG0480020366.01 | MsG0580025203.01 | 0.841953 | 3.476084e-58 | 5.190367e-55 |
| MsG0480020366.01 | MsG0580025504.01 | 0.831851 | 1.320621e-55 | 1.450917e-52 |
| MsG0480020366.01 | MsG0580028927.01 | 0.814142 | 1.790755e-51 | 1.191996e-48 |
| MsG0480020366.01 | MsG0580028955.01 | 0.818091 | 2.349300e-52 | 1.741672e-49 |
| MsG0480020366.01 | MsG0580029197.01 | 0.806942 | 6.438315e-50 | 3.540079e-47 |
| MsG0480020366.01 | MsG0580029591.01 | 0.835099 | 2.043444e-56 | 2.473271e-53 |
| MsG0480020366.01 | MsG0680034415.01 | 0.805052 | 1.608315e-49 | 8.424918e-47 |
| MsG0480020366.01 | MsG0680035792.01 | 0.835421 | 1.694949e-56 | 2.071634e-53 |
| MsG0480020366.01 | MsG0780037371.01 | 0.834955 | 2.221954e-56 | 2.678149e-53 |
| MsG0480020366.01 | MsG0780038306.01 | 0.830428 | 2.952916e-55 | 3.110207e-52 |
| MsG0480020366.01 | MsG0780038736.01 | 0.849664 | 2.795791e-60 | 5.339385e-57 |
| MsG0480020366.01 | MsG0780038952.01 | 0.818381 | 2.019133e-52 | 1.509157e-49 |
| MsG0480020366.01 | MsG0780039536.01 | 0.805153 | 1.531377e-49 | 8.042899e-47 |
| MsG0480020366.01 | MsG0780039861.01 | 0.815240 | 1.023327e-51 | 7.016574e-49 |
| MsG0480020366.01 | MsG0780040364.01 | 0.820889 | 5.403948e-53 | 4.329912e-50 |
| MsG0480020366.01 | MsG0780040620.01 | 0.810411 | 1.168408e-50 | 7.037692e-48 |
| MsG0480020366.01 | MsG0780040641.01 | 0.834449 | 2.977388e-56 | 3.534755e-53 |
| MsG0480020366.01 | MsG0780040899.01 | 0.814896 | 1.219585e-51 | 8.284664e-49 |
| MsG0480020366.01 | MsG0780041008.01 | 0.828359 | 9.394893e-55 | 9.316403e-52 |
| MsG0480020366.01 | MsG0780041273.01 | 0.821437 | 4.040244e-53 | 3.286850e-50 |
| MsG0480020366.01 | MsG0780041359.01 | 0.831849 | 1.322189e-55 | 1.452579e-52 |
| MsG0480020366.01 | MsG0780041701.01 | 0.800339 | 1.509826e-48 | 7.012657e-46 |
| MsG0480020366.01 | MsG0880042906.01 | 0.800305 | 1.533641e-48 | 7.117290e-46 |
| MsG0480020366.01 | MsG0880044989.01 | 0.835280 | 1.839382e-56 | 2.238842e-53 |
| MsG0480020366.01 | MsG0880045015.01 | 0.807017 | 6.206232e-50 | 3.419148e-47 |
| MsG0480020366.01 | MsG0880045439.01 | 0.811073 | 8.401593e-51 | 5.150855e-48 |
| MsG0480020366.01 | MsG0880045584.01 | 0.834160 | 3.518885e-56 | 4.140863e-53 |
| MsG0480020366.01 | MsG0880045612.01 | 0.826107 | 3.251809e-54 | 3.021022e-51 |
| MsG0480020366.01 | MsG0880045647.01 | 0.826753 | 2.281993e-54 | 2.159395e-51 |
| MsG0480020366.01 | MsG0880045989.01 | 0.804971 | 1.672181e-49 | 8.741431e-47 |
| MsG0480020366.01 | MsG0880046319.01 | 0.805217 | 1.484878e-49 | 7.811313e-47 |
| MsG0480020366.01 | MsG0880046433.01 | 0.835012 | 2.149203e-56 | 2.594739e-53 |
| MsG0480020366.01 | MsG0880046529.01 | 0.852959 | 3.278549e-61 | 6.969898e-58 |
| MsG0480020366.01 | MsG0880046904.01 | 0.824282 | 8.783080e-54 | 7.744481e-51 |
| MsG0480020366.01 | MsG0880046905.01 | 0.855466 | 6.190630e-62 | 1.430685e-58 |
| MsG0480020366.01 | MsG0880046993.01 | 0.830780 | 2.421524e-55 | 2.577077e-52 |
| MsG0480020366.01 | MsG0880047649.01 | 0.844069 | 9.495365e-59 | 1.515414e-55 |
| MsG0380015340.01 | MsG0480020366.01 | 0.855128 | 7.762706e-62 | 1.773668e-58 |
| MsG0380015825.01 | MsG0480020366.01 | 0.809878 | 1.522227e-50 | 9.042153e-48 |
| MsG0380015954.01 | MsG0480020366.01 | 0.826844 | 2.170437e-54 | 2.059233e-51 |
| MsG0380016027.01 | MsG0480020366.01 | 0.804031 | 2.624966e-49 | 1.339403e-46 |
| MsG0380016091.01 | MsG0480020366.01 | 0.809654 | 1.700795e-50 | 1.004376e-47 |
| MsG0380016225.01 | MsG0480020366.01 | 0.838709 | 2.447179e-57 | 3.305306e-54 |
| MsG0380017181.01 | MsG0480020366.01 | 0.869592 | 2.758609e-66 | 1.040975e-62 |
| MsG0380017282.01 | MsG0480020366.01 | 0.813314 | 2.725853e-51 | 1.774082e-48 |
| MsG0380017332.01 | MsG0480020366.01 | 0.823547 | 1.306302e-53 | 1.128187e-50 |
| MsG0380017588.01 | MsG0480020366.01 | 0.802294 | 6.005406e-49 | 2.931120e-46 |
| MsG0380017605.01 | MsG0480020366.01 | 0.822312 | 2.534299e-53 | 2.113642e-50 |
| MsG0480018106.01 | MsG0480020366.01 | 0.827714 | 1.342980e-54 | 1.306974e-51 |
| MsG0480018228.01 | MsG0480020366.01 | 0.839860 | 1.231011e-57 | 1.722160e-54 |
| MsG0280006909.01 | MsG0480020366.01 | 0.829427 | 5.178251e-55 | 5.298227e-52 |
| MsG0280006924.01 | MsG0480020366.01 | 0.815900 | 7.294593e-52 | 5.093011e-49 |
| MsG0280007092.01 | MsG0480020366.01 | 0.840298 | 9.460581e-58 | 1.341701e-54 |
| MsG0280008692.01 | MsG0480020366.01 | 0.800136 | 1.660350e-48 | 7.672045e-46 |
| MsG0280009866.01 | MsG0480020366.01 | 0.820344 | 7.209677e-53 | 5.689834e-50 |
| MsG0280010352.01 | MsG0480020366.01 | 0.807088 | 5.994648e-50 | 3.308604e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020366.01.T01 | MTR_4g049390 | 96.979 | 331 | 10 | 0 | 4 | 334 | 208 | 538 | 0.0 | 663 |
| MsG0480020366.01.T01 | MTR_4g048350 | 95.468 | 331 | 15 | 0 | 4 | 334 | 207 | 537 | 0.0 | 654 |
| MsG0480020366.01.T01 | MTR_2g088080 | 88.450 | 329 | 38 | 0 | 4 | 332 | 130 | 458 | 0.0 | 615 |
| MsG0480020366.01.T01 | MTR_2g088080 | 88.450 | 329 | 38 | 0 | 4 | 332 | 211 | 539 | 0.0 | 614 |
| MsG0480020366.01.T01 | MTR_4g075690 | 73.333 | 330 | 88 | 0 | 4 | 333 | 210 | 539 | 0.0 | 521 |
| MsG0480020366.01.T01 | MTR_4g132320 | 72.561 | 328 | 90 | 0 | 4 | 331 | 212 | 539 | 6.03e-175 | 496 |
| MsG0480020366.01.T01 | MTR_3g115050 | 69.091 | 330 | 102 | 0 | 4 | 333 | 211 | 540 | 1.82e-174 | 495 |
| MsG0480020366.01.T01 | MTR_1g026410 | 72.121 | 330 | 92 | 0 | 4 | 333 | 210 | 539 | 2.63e-171 | 487 |
| MsG0480020366.01.T01 | MTR_5g018270 | 63.333 | 330 | 119 | 1 | 4 | 333 | 210 | 537 | 1.38e-150 | 434 |
| MsG0480020366.01.T01 | MTR_8g479390 | 60.725 | 331 | 129 | 1 | 4 | 333 | 210 | 540 | 6.50e-145 | 420 |
| MsG0480020366.01.T01 | MTR_4g075690 | 72.269 | 238 | 66 | 0 | 4 | 241 | 210 | 447 | 3.99e-127 | 371 |
| MsG0480020366.01.T01 | MTR_8g479380 | 54.573 | 328 | 147 | 2 | 3 | 329 | 208 | 534 | 6.14e-127 | 374 |
| MsG0480020366.01.T01 | MTR_4g083190 | 51.682 | 327 | 154 | 3 | 4 | 327 | 213 | 538 | 5.85e-117 | 349 |
| MsG0480020366.01.T01 | MTR_4g083210 | 51.988 | 327 | 153 | 3 | 4 | 327 | 207 | 532 | 6.24e-116 | 346 |
| MsG0480020366.01.T01 | MTR_3g083440 | 50.765 | 327 | 157 | 3 | 4 | 327 | 211 | 536 | 3.89e-113 | 339 |
| MsG0480020366.01.T01 | MTR_3g083390 | 50.765 | 327 | 157 | 3 | 4 | 327 | 211 | 536 | 7.06e-113 | 338 |
| MsG0480020366.01.T01 | MTR_3g083410 | 50.765 | 327 | 157 | 3 | 4 | 327 | 175 | 500 | 1.10e-112 | 337 |
| MsG0480020366.01.T01 | MTR_3g083450 | 51.070 | 327 | 156 | 3 | 4 | 327 | 212 | 537 | 2.52e-112 | 337 |
| MsG0480020366.01.T01 | MTR_3g083430 | 50.459 | 327 | 158 | 3 | 4 | 327 | 211 | 536 | 5.06e-112 | 336 |
| MsG0480020366.01.T01 | MTR_3g083400 | 50.459 | 327 | 158 | 3 | 4 | 327 | 211 | 536 | 7.88e-112 | 336 |
| MsG0480020366.01.T01 | MTR_4g101650 | 50.150 | 333 | 157 | 5 | 4 | 328 | 220 | 551 | 3.18e-111 | 335 |
| MsG0480020366.01.T01 | MTR_3g008580 | 48.494 | 332 | 162 | 5 | 4 | 327 | 222 | 552 | 1.27e-102 | 313 |
| MsG0480020366.01.T01 | MTR_7g051440 | 47.273 | 330 | 166 | 6 | 4 | 327 | 222 | 549 | 1.05e-97 | 301 |
| MsG0480020366.01.T01 | MTR_1g090707 | 46.037 | 328 | 174 | 3 | 4 | 328 | 211 | 538 | 9.99e-93 | 288 |
| MsG0480020366.01.T01 | MTR_4g133150 | 64.341 | 129 | 29 | 1 | 4 | 132 | 100 | 211 | 4.26e-46 | 156 |
| MsG0480020366.01.T01 | MTR_4g133160 | 54.128 | 109 | 36 | 2 | 208 | 316 | 1 | 95 | 1.01e-31 | 114 |
| MsG0480020366.01.T01 | MTR_3g078700 | 26.608 | 342 | 219 | 8 | 5 | 327 | 208 | 536 | 7.53e-30 | 119 |
| MsG0480020366.01.T01 | MTR_5g020620 | 31.124 | 347 | 210 | 13 | 4 | 326 | 220 | 561 | 3.18e-27 | 112 |
| MsG0480020366.01.T01 | MTR_3g078740 | 25.344 | 363 | 219 | 8 | 5 | 327 | 235 | 585 | 4.26e-26 | 109 |
| MsG0480020366.01.T01 | MTR_3g078730 | 27.405 | 343 | 215 | 9 | 5 | 327 | 207 | 535 | 8.26e-26 | 108 |
| MsG0480020366.01.T01 | MTR_5g020600 | 29.630 | 351 | 211 | 13 | 4 | 326 | 224 | 566 | 3.40e-25 | 106 |
| MsG0480020366.01.T01 | MTR_5g018290 | 62.121 | 66 | 25 | 0 | 268 | 333 | 5 | 70 | 4.52e-24 | 94.0 |
| MsG0480020366.01.T01 | MTR_8g091390 | 27.701 | 361 | 209 | 10 | 1 | 331 | 234 | 572 | 1.10e-23 | 102 |
| MsG0480020366.01.T01 | MTR_5g081810 | 26.136 | 352 | 223 | 8 | 3 | 326 | 187 | 529 | 4.71e-22 | 97.1 |
| MsG0480020366.01.T01 | MTR_3g462760 | 26.377 | 345 | 224 | 10 | 6 | 326 | 218 | 556 | 6.00e-22 | 97.1 |
| MsG0480020366.01.T01 | MTR_5g069680 | 26.000 | 350 | 224 | 11 | 4 | 326 | 217 | 558 | 1.98e-21 | 95.5 |
| MsG0480020366.01.T01 | MTR_4g015120 | 28.247 | 308 | 194 | 9 | 3 | 286 | 213 | 517 | 8.94e-20 | 90.5 |
| MsG0480020366.01.T01 | MTR_5g073210 | 27.528 | 356 | 221 | 13 | 1 | 326 | 212 | 560 | 1.03e-16 | 81.3 |
| MsG0480020366.01.T01 | MTR_3g101640 | 28.704 | 324 | 178 | 14 | 4 | 286 | 220 | 531 | 1.56e-16 | 80.9 |
| MsG0480020366.01.T01 | MTR_2g008330 | 24.294 | 354 | 235 | 10 | 4 | 326 | 228 | 579 | 1.13e-15 | 78.2 |
| MsG0480020366.01.T01 | MTR_3g071890 | 25.982 | 331 | 214 | 10 | 1 | 303 | 220 | 547 | 1.61e-15 | 77.8 |
| MsG0480020366.01.T01 | MTR_3g101635 | 27.245 | 323 | 182 | 12 | 4 | 286 | 217 | 526 | 8.92e-14 | 72.4 |
| MsG0480020366.01.T01 | MTR_5g083360 | 26.019 | 319 | 197 | 11 | 3 | 286 | 213 | 527 | 4.82e-12 | 67.0 |
| MsG0480020366.01.T01 | MTR_7g458880 | 25.138 | 362 | 228 | 14 | 4 | 326 | 223 | 580 | 2.80e-11 | 64.7 |
| MsG0480020366.01.T01 | MTR_7g058690 | 24.922 | 321 | 200 | 13 | 4 | 286 | 223 | 540 | 7.68e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020366.01.T01 | AT4G22010 | 73.112 | 331 | 88 | 1 | 4 | 333 | 207 | 537 | 2.09e-180 | 510 |
| MsG0480020366.01.T01 | AT1G76160 | 72.340 | 329 | 91 | 0 | 4 | 332 | 208 | 536 | 2.23e-179 | 508 |
| MsG0480020366.01.T01 | AT1G21850 | 68.485 | 330 | 103 | 1 | 4 | 333 | 209 | 537 | 2.70e-170 | 485 |
| MsG0480020366.01.T01 | AT1G41830 | 65.758 | 330 | 113 | 0 | 4 | 333 | 209 | 538 | 1.55e-166 | 475 |
| MsG0480020366.01.T01 | AT1G21860 | 66.667 | 330 | 109 | 1 | 4 | 333 | 209 | 537 | 3.11e-164 | 469 |
| MsG0480020366.01.T01 | AT4G38420 | 64.478 | 335 | 114 | 2 | 4 | 333 | 212 | 546 | 1.76e-153 | 442 |
| MsG0480020366.01.T01 | AT4G28090 | 59.939 | 327 | 130 | 1 | 4 | 329 | 211 | 537 | 3.23e-145 | 421 |
| MsG0480020366.01.T01 | AT5G66920 | 55.455 | 330 | 147 | 0 | 4 | 333 | 216 | 545 | 2.37e-129 | 380 |
| MsG0480020366.01.T01 | AT2G23630 | 55.521 | 326 | 145 | 0 | 4 | 329 | 215 | 540 | 1.42e-123 | 365 |
| MsG0480020366.01.T01 | AT2G23630 | 55.521 | 326 | 145 | 0 | 4 | 329 | 210 | 535 | 1.89e-123 | 365 |
| MsG0480020366.01.T01 | AT1G55570 | 53.433 | 335 | 151 | 3 | 1 | 331 | 212 | 545 | 3.84e-123 | 365 |
| MsG0480020366.01.T01 | AT4G37160 | 52.761 | 326 | 154 | 0 | 4 | 329 | 212 | 537 | 2.21e-122 | 362 |
| MsG0480020366.01.T01 | AT3G13400 | 53.172 | 331 | 151 | 3 | 4 | 331 | 213 | 542 | 4.75e-122 | 362 |
| MsG0480020366.01.T01 | AT3G13400 | 53.172 | 331 | 151 | 3 | 4 | 331 | 213 | 542 | 4.75e-122 | 362 |
| MsG0480020366.01.T01 | AT3G13390 | 53.731 | 335 | 150 | 3 | 1 | 331 | 211 | 544 | 1.18e-121 | 361 |
| MsG0480020366.01.T01 | AT1G55560 | 51.964 | 331 | 155 | 3 | 4 | 331 | 212 | 541 | 4.11e-120 | 357 |
| MsG0480020366.01.T01 | AT4G38420 | 62.593 | 270 | 96 | 2 | 4 | 268 | 212 | 481 | 2.02e-113 | 338 |
| MsG0480020366.01.T01 | AT4G12420 | 49.096 | 332 | 160 | 5 | 4 | 327 | 218 | 548 | 9.99e-106 | 321 |
| MsG0480020366.01.T01 | AT4G12420 | 49.096 | 332 | 160 | 5 | 4 | 327 | 218 | 548 | 9.99e-106 | 321 |
| MsG0480020366.01.T01 | AT4G25240 | 48.949 | 333 | 159 | 7 | 4 | 327 | 221 | 551 | 2.68e-103 | 315 |
| MsG0480020366.01.T01 | AT4G25240 | 48.949 | 333 | 159 | 7 | 4 | 327 | 221 | 551 | 2.68e-103 | 315 |
| MsG0480020366.01.T01 | AT5G48450 | 48.036 | 331 | 164 | 7 | 4 | 328 | 216 | 544 | 6.38e-102 | 311 |
| MsG0480020366.01.T01 | AT5G48450 | 48.036 | 331 | 164 | 7 | 4 | 328 | 216 | 544 | 1.03e-101 | 312 |
| MsG0480020366.01.T01 | AT1G75790 | 47.181 | 337 | 167 | 3 | 4 | 329 | 208 | 544 | 1.72e-100 | 306 |
| MsG0480020366.01.T01 | AT5G51480 | 47.748 | 333 | 164 | 7 | 4 | 327 | 220 | 551 | 2.10e-100 | 308 |
| MsG0480020366.01.T01 | AT4G38420 | 62.140 | 243 | 87 | 2 | 4 | 241 | 212 | 454 | 4.94e-100 | 302 |
| MsG0480020366.01.T01 | AT4G37160 | 54.622 | 238 | 108 | 0 | 4 | 241 | 212 | 449 | 4.89e-89 | 274 |
| MsG0480020366.01.T01 | AT5G21105 | 28.286 | 350 | 203 | 11 | 5 | 327 | 57 | 385 | 5.33e-32 | 124 |
| MsG0480020366.01.T01 | AT5G21105 | 28.286 | 350 | 203 | 11 | 5 | 327 | 248 | 576 | 4.57e-31 | 123 |
| MsG0480020366.01.T01 | AT5G21105 | 29.642 | 307 | 173 | 10 | 5 | 284 | 248 | 538 | 1.38e-29 | 119 |
| MsG0480020366.01.T01 | AT4G39830 | 26.857 | 350 | 223 | 8 | 1 | 328 | 144 | 482 | 1.50e-28 | 115 |
| MsG0480020366.01.T01 | AT4G39830 | 26.857 | 350 | 223 | 8 | 1 | 328 | 146 | 484 | 1.53e-28 | 115 |
| MsG0480020366.01.T01 | AT4G39830 | 26.857 | 350 | 223 | 8 | 1 | 328 | 133 | 471 | 2.01e-28 | 115 |
| MsG0480020366.01.T01 | AT4G39830 | 26.857 | 350 | 223 | 8 | 1 | 328 | 241 | 579 | 3.83e-28 | 115 |
| MsG0480020366.01.T01 | AT5G21100 | 24.855 | 346 | 222 | 9 | 5 | 327 | 231 | 561 | 1.00e-24 | 105 |
| MsG0480020366.01.T01 | AT5G58910 | 27.920 | 351 | 224 | 9 | 3 | 326 | 175 | 523 | 1.66e-23 | 101 |
| MsG0480020366.01.T01 | AT5G58910 | 27.920 | 351 | 224 | 9 | 3 | 326 | 218 | 566 | 1.85e-23 | 101 |
| MsG0480020366.01.T01 | AT5G58910 | 27.920 | 351 | 224 | 9 | 3 | 326 | 219 | 567 | 1.92e-23 | 101 |
| MsG0480020366.01.T01 | AT2G38080 | 25.496 | 353 | 223 | 10 | 4 | 326 | 216 | 558 | 3.17e-19 | 89.0 |
| MsG0480020366.01.T01 | AT5G01190 | 24.157 | 356 | 227 | 11 | 3 | 326 | 200 | 544 | 6.76e-19 | 87.8 |
| MsG0480020366.01.T01 | AT5G01190 | 24.157 | 356 | 227 | 11 | 3 | 326 | 214 | 558 | 7.67e-19 | 87.8 |
| MsG0480020366.01.T01 | AT5G03260 | 26.705 | 352 | 221 | 11 | 3 | 326 | 215 | 557 | 1.48e-18 | 87.0 |
| MsG0480020366.01.T01 | AT5G01050 | 26.087 | 368 | 220 | 14 | 4 | 328 | 212 | 570 | 5.38e-16 | 79.3 |
| MsG0480020366.01.T01 | AT2G30210 | 25.857 | 321 | 198 | 13 | 1 | 286 | 215 | 530 | 2.50e-14 | 74.3 |
| MsG0480020366.01.T01 | AT5G05390 | 24.920 | 313 | 203 | 8 | 3 | 286 | 216 | 525 | 3.18e-14 | 73.9 |
| MsG0480020366.01.T01 | AT5G01040 | 25.697 | 323 | 192 | 12 | 4 | 286 | 212 | 526 | 1.71e-13 | 71.6 |
| MsG0480020366.01.T01 | AT5G48100 | 26.730 | 318 | 192 | 11 | 4 | 286 | 212 | 523 | 3.62e-13 | 70.9 |
| MsG0480020366.01.T01 | AT2G40370 | 23.926 | 326 | 203 | 9 | 3 | 286 | 218 | 540 | 5.25e-13 | 70.1 |
| MsG0480020366.01.T01 | AT2G29130 | 23.659 | 317 | 205 | 11 | 4 | 286 | 220 | 533 | 4.78e-11 | 64.3 |
Find 97 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTGCTGGAAGTGTTTC+TGG | 0.146839 | 4:+39862548 | MsG0480020366.01.T01:CDS |
| GAATTGGGCAAGACAGTATT+TGG | 0.172946 | 4:+39864282 | MsG0480020366.01.T01:CDS |
| TGGTAGGTTCCTTGTGGATT+TGG | 0.297781 | 4:-39863322 | None:intergenic |
| GACTCACTTGACATTCATTT+GGG | 0.313425 | 4:+39862410 | MsG0480020366.01.T01:CDS |
| CCACAAGGAACCTACCATTA+TGG | 0.317959 | 4:+39863328 | MsG0480020366.01.T01:CDS |
| CCGCCACCGGTGGGGTTGTC+CGG | 0.319670 | 4:-39863514 | None:intergenic |
| TGACTCACTTGACATTCATT+TGG | 0.322743 | 4:+39862409 | MsG0480020366.01.T01:CDS |
| CAGGGAAGACTTACAGATTC+CGG | 0.326068 | 4:+39862285 | MsG0480020366.01.T01:CDS |
| AATACACTCTAAGATAAAAT+TGG | 0.336664 | 4:-39864309 | None:intergenic |
| GTTCCTTGTGGATTTGGTCT+TGG | 0.355975 | 4:-39863316 | None:intergenic |
| CTCCACAAAACCTCGAAAAT+CGG | 0.365811 | 4:-39863566 | None:intergenic |
| TTGCAATCATGGCACATTGA+TGG | 0.376663 | 4:+39863616 | MsG0480020366.01.T01:CDS |
| TGAAGTGCATTGCTTGGAAT+AGG | 0.394371 | 4:-39864361 | None:intergenic |
| TCATCTCTCGATGAATTTGC+AGG | 0.394878 | 4:-39864334 | None:intergenic |
| CTGAAGATACTTTGCAATCA+TGG | 0.396158 | 4:+39863605 | MsG0480020366.01.T01:CDS |
| TTGAACAAGCTCGCTCTCTA+AGG | 0.396269 | 4:+39862612 | MsG0480020366.01.T01:CDS |
| CAAGCTTCATCTTATGCCCT+TGG | 0.398188 | 4:-39862349 | None:intergenic |
| GTTTCTGGTCCTCTTCCTGC+TGG | 0.399456 | 4:+39862563 | MsG0480020366.01.T01:CDS |
| TAAAGTGCTTGATTGTTTGC+AGG | 0.406584 | 4:+39862266 | None:intergenic |
| GGACATAGCTTCTTTGTAGT+AGG | 0.408807 | 4:+39863637 | MsG0480020366.01.T01:CDS |
| CATGATTGCAAAGTATCTTC+AGG | 0.417916 | 4:-39863604 | None:intergenic |
| GGGGCAGACGTATTCTGTAT+TGG | 0.447694 | 4:+39862430 | MsG0480020366.01.T01:CDS |
| CCCTTGGATTCTGAAATTGA+TGG | 0.448632 | 4:-39862333 | None:intergenic |
| GGAATGTGAGGTCTGAGAAT+TGG | 0.449805 | 4:+39864266 | MsG0480020366.01.T01:CDS |
| GAAGTGCATTGCTTGGAATA+GGG | 0.450911 | 4:-39864360 | None:intergenic |
| CGCCACCGGTGGGGTTGTCC+GGG | 0.453611 | 4:-39863513 | None:intergenic |
| TTGTGTTTATCATTCCATAA+TGG | 0.454708 | 4:-39863342 | None:intergenic |
| GAATGTGAGGTCTGAGAATT+GGG | 0.454791 | 4:+39864267 | MsG0480020366.01.T01:CDS |
| ATTTCAGTGGTTGGTCCAGC+AGG | 0.462597 | 4:-39862578 | None:intergenic |
| CCGGACAACCCCACCGGTGG+CGG | 0.466606 | 4:+39863514 | MsG0480020366.01.T01:CDS |
| AATTGGGCAAGACAGTATTT+GGG | 0.467279 | 4:+39864283 | MsG0480020366.01.T01:CDS |
| CCACACTGAAGTGCATTGCT+TGG | 0.471125 | 4:-39864367 | None:intergenic |
| TACAGTGCAGTCCATGACTT+TGG | 0.473369 | 4:-39864217 | None:intergenic |
| AATTCTGCTCCAATTATCAA+TGG | 0.480816 | 4:+39863385 | MsG0480020366.01.T01:CDS |
| GACAACCCCACCGGTGGCGG+CGG | 0.483320 | 4:+39863517 | MsG0480020366.01.T01:CDS |
| TAATCCCCACATTTGATATC+CGG | 0.487792 | 4:-39862304 | None:intergenic |
| CTTCATTACAGTAACTCTGC+TGG | 0.493285 | 4:+39862536 | MsG0480020366.01.T01:CDS |
| ATGAAGCTTGTTGAGGTGGA+AGG | 0.497246 | 4:+39862362 | MsG0480020366.01.T01:CDS |
| AGTTTGAGTGGTGTATCAGC+AGG | 0.498988 | 4:-39863445 | None:intergenic |
| CACAACAAGGTTCACGTCAC+AGG | 0.499799 | 4:+39862493 | MsG0480020366.01.T01:CDS |
| AATTGCTCGTAGTACAGTTC+AGG | 0.508901 | 4:+39863927 | MsG0480020366.01.T01:CDS |
| ACAACAATGTAGTAGTCATT+TGG | 0.512474 | 4:-39862470 | None:intergenic |
| GACATAGCTTCTTTGTAGTA+GGG | 0.514001 | 4:+39863638 | MsG0480020366.01.T01:CDS |
| ATTGGAATTTGCAGGATGGA+TGG | 0.516169 | 4:+39863856 | MsG0480020366.01.T01:intron |
| AGAGTTACTGTAATGAAGAA+TGG | 0.523401 | 4:-39862531 | None:intergenic |
| TCCATCAATTTCAGAATCCA+AGG | 0.526236 | 4:+39862332 | MsG0480020366.01.T01:CDS |
| CATCTCTCGATGAATTTGCA+GGG | 0.529157 | 4:-39864333 | None:intergenic |
| ACTTCAGTGTGGCAAGGCAG+TGG | 0.529238 | 4:+39864378 | MsG0480020366.01.T01:CDS |
| GACTGCACTGTACATGCCAT+TGG | 0.535391 | 4:+39864228 | MsG0480020366.01.T01:CDS |
| AAGATAACCGCCGCCACCGG+TGG | 0.541603 | 4:-39863524 | None:intergenic |
| GTTTATCATTCCATAATGGT+AGG | 0.542317 | 4:-39863338 | None:intergenic |
| CAGATTCCGGATATCAAATG+TGG | 0.551399 | 4:+39862298 | MsG0480020366.01.T01:CDS |
| CTTCAGTGTGGCAAGGCAGT+GGG | 0.552136 | 4:+39864379 | MsG0480020366.01.T01:CDS |
| CTGATTACTTCAAGATCCAA+GGG | 0.552515 | 4:+39863470 | MsG0480020366.01.T01:CDS |
| AGATAACCGCCGCCACCGGT+GGG | 0.552834 | 4:-39863523 | None:intergenic |
| GTGGTTGGTCCAGCAGGAAG+AGG | 0.553379 | 4:-39862572 | None:intergenic |
| TTATCTTCAGACTTCTGTCA+TGG | 0.553926 | 4:+39863540 | MsG0480020366.01.T01:CDS |
| CCATAATGGTAGGTTCCTTG+TGG | 0.554362 | 4:-39863328 | None:intergenic |
| TTCCAAGTGAAAACACCCCT+TGG | 0.556437 | 4:-39863486 | None:intergenic |
| GACCAACCACTGAAATCGAT+TGG | 0.557851 | 4:+39862585 | MsG0480020366.01.T01:CDS |
| CTGAAGATAACCGCCGCCAC+CGG | 0.560760 | 4:-39863527 | None:intergenic |
| AGGAGGAATCTTACAGCAAG+TGG | 0.561277 | 4:+39863292 | MsG0480020366.01.T01:intron |
| ACACTCTAAGATAAAATTGG+TGG | 0.562579 | 4:-39864306 | None:intergenic |
| GCTGATTACTTCAAGATCCA+AGG | 0.566624 | 4:+39863469 | MsG0480020366.01.T01:CDS |
| CACATTCCCACATTATCCAA+TGG | 0.568508 | 4:-39864244 | None:intergenic |
| AGTATCCCGGACAACCCCAC+CGG | 0.569660 | 4:+39863508 | MsG0480020366.01.T01:CDS |
| TAAGATGAAGCTTGTTGAGG+TGG | 0.574215 | 4:+39862358 | MsG0480020366.01.T01:CDS |
| CACAGGTGTATCCAAAGTCA+TGG | 0.575020 | 4:+39864206 | MsG0480020366.01.T01:intron |
| ACAATGTAGTAGTCATTTGG+TGG | 0.577035 | 4:-39862467 | None:intergenic |
| GATTCTGAAATTGATGGATG+TGG | 0.586463 | 4:-39862327 | None:intergenic |
| AAGTAATCAGCTAGTTTGAG+TGG | 0.592921 | 4:-39863457 | None:intergenic |
| GACCAATCGATTTCAGTGGT+TGG | 0.598810 | 4:-39862587 | None:intergenic |
| ATGTGGGAATGTGGAATGTG+AGG | 0.600216 | 4:+39864254 | MsG0480020366.01.T01:CDS |
| AAAGTGCTTGATTGTTTGCA+GGG | 0.606583 | 4:+39862267 | None:intergenic |
| AGATTCCGGATATCAAATGT+GGG | 0.607158 | 4:+39862299 | MsG0480020366.01.T01:CDS |
| ACTACATTGTTGTCACAACA+AGG | 0.609823 | 4:+39862480 | MsG0480020366.01.T01:CDS |
| GGAATTTGCAGGATGGATGG+AGG | 0.610007 | 4:+39863859 | MsG0480020366.01.T01:intron |
| GATAACCGCCGCCACCGGTG+GGG | 0.610031 | 4:-39863522 | None:intergenic |
| ATCCCGGACAACCCCACCGG+TGG | 0.615788 | 4:+39863511 | MsG0480020366.01.T01:CDS |
| AACGGACCAATCGATTTCAG+TGG | 0.617391 | 4:-39862591 | None:intergenic |
| CAATGCACTTCAGTGTGGCA+AGG | 0.617833 | 4:+39864372 | MsG0480020366.01.T01:CDS |
| ATCTCTCGATGAATTTGCAG+GGG | 0.618315 | 4:-39864332 | None:intergenic |
| GTACATGCCATTGGATAATG+TGG | 0.618969 | 4:+39864237 | MsG0480020366.01.T01:CDS |
| TAGAGAGCGAGCTTGTTCAA+CGG | 0.637365 | 4:-39862609 | None:intergenic |
| GCATAAGATGAAGCTTGTTG+AGG | 0.650000 | 4:+39862355 | MsG0480020366.01.T01:CDS |
| CCATCAATTTCAGAATCCAA+GGG | 0.653636 | 4:+39862333 | MsG0480020366.01.T01:CDS |
| GCAGGATGGATGGAGGACAA+TGG | 0.655581 | 4:+39863866 | MsG0480020366.01.T01:intron |
| GTATTCTGTATTGGTTACTG+CGG | 0.660650 | 4:+39862439 | MsG0480020366.01.T01:CDS |
| GTTTGAGTGGTGTATCAGCA+GGG | 0.670319 | 4:-39863444 | None:intergenic |
| CATTGGATAATGTGGGAATG+TGG | 0.674160 | 4:+39864245 | MsG0480020366.01.T01:CDS |
| TCTTCAGACTTCTGTCATGG+CGG | 0.691399 | 4:+39863543 | MsG0480020366.01.T01:CDS |
| CCAAGCAATGCACTTCAGTG+TGG | 0.697000 | 4:+39864367 | MsG0480020366.01.T01:CDS |
| GATTCCGGATATCAAATGTG+GGG | 0.700602 | 4:+39862300 | MsG0480020366.01.T01:CDS |
| ACTCACTTGACATTCATTTG+GGG | 0.703591 | 4:+39862411 | MsG0480020366.01.T01:CDS |
| GGACCAAGACCAAATCCACA+AGG | 0.716812 | 4:+39863313 | MsG0480020366.01.T01:CDS |
| TACATGCCATTGGATAATGT+GGG | 0.717897 | 4:+39864238 | MsG0480020366.01.T01:CDS |
| TGATTACTTCAAGATCCAAG+GGG | 0.751364 | 4:+39863471 | MsG0480020366.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTTTTTTTTCCGA+TGG | + | Chr4:39862707-39862726 | MsG0480020366.01.T01:intron | 15.0% |
| !!! | TGATAATATGGATATTTTAT+TGG | + | Chr4:39863838-39863857 | MsG0480020366.01.T01:intron | 15.0% |
| !! | AAATATCCATATTATCAGAA+TGG | - | Chr4:39863835-39863854 | None:intergenic | 20.0% |
| !! | AAATTAAGAATGAGTATTAG+AGG | - | Chr4:39864046-39864065 | None:intergenic | 20.0% |
| !! | AACAAATGATTAATTGAATC+AGG | + | Chr4:39863272-39863291 | MsG0480020366.01.T01:intron | 20.0% |
| !! | ATATAAATTACTGCACATAT+CGG | + | Chr4:39863177-39863196 | MsG0480020366.01.T01:intron | 20.0% |
| !!! | AATACACTCTAAGATAAAAT+TGG | - | Chr4:39864312-39864331 | None:intergenic | 20.0% |
| !!! | CATATTACTGATAATGATTT+TGG | + | Chr4:39864143-39864162 | MsG0480020366.01.T01:intron | 20.0% |
| !!! | TATTTTCCATTCTGATAATA+TGG | + | Chr4:39863826-39863845 | MsG0480020366.01.T01:intron | 20.0% |
| ! | AAACTAATTCATGGTAGTTA+AGG | + | Chr4:39863078-39863097 | MsG0480020366.01.T01:intron | 25.0% |
| ! | AAAGTAAGCAAACTAATTCA+TGG | + | Chr4:39863069-39863088 | MsG0480020366.01.T01:intron | 25.0% |
| ! | AAATGATTAATTGAATCAGG+AGG | + | Chr4:39863275-39863294 | MsG0480020366.01.T01:intron | 25.0% |
| ! | ATTTCGAAGAAAAAAATCGT+TGG | + | Chr4:39863130-39863149 | MsG0480020366.01.T01:intron | 25.0% |
| ! | TTGTGTTTATCATTCCATAA+TGG | - | Chr4:39863345-39863364 | None:intergenic | 25.0% |
| !! | ATGCATTGACATAATTTGAT+TGG | + | Chr4:39862862-39862881 | MsG0480020366.01.T01:intron | 25.0% |
| !! | GATATTTTATTGGAATTTGC+AGG | + | Chr4:39863848-39863867 | MsG0480020366.01.T01:intron | 25.0% |
| !! | TTGGTCTTTAACATGATTAA+GGG | + | Chr4:39864162-39864181 | MsG0480020366.01.T01:intron | 25.0% |
| !! | TTTGGTCTTTAACATGATTA+AGG | + | Chr4:39864161-39864180 | MsG0480020366.01.T01:intron | 25.0% |
| !!! | AGTTTGCTTACTTTTCATTT+CGG | - | Chr4:39863063-39863082 | None:intergenic | 25.0% |
| !!! | CTTTGTTTTCCATTGATAAT+TGG | - | Chr4:39863397-39863416 | None:intergenic | 25.0% |
| AATTCTGCTCCAATTATCAA+TGG | + | Chr4:39863385-39863404 | MsG0480020366.01.T01:CDS | 30.0% | |
| ACAACAATGTAGTAGTCATT+TGG | - | Chr4:39862473-39862492 | None:intergenic | 30.0% | |
| AGAGTTACTGTAATGAAGAA+TGG | - | Chr4:39862534-39862553 | None:intergenic | 30.0% | |
| CATCATAGATCATATGTCAA+TGG | - | Chr4:39864021-39864040 | None:intergenic | 30.0% | |
| CGAATTCAATTCTTATCCAT+CGG | - | Chr4:39862726-39862745 | None:intergenic | 30.0% | |
| CGATGGATAAGAATTGAATT+CGG | + | Chr4:39862724-39862743 | MsG0480020366.01.T01:intron | 30.0% | |
| GTTTATCATTCCATAATGGT+AGG | - | Chr4:39863341-39863360 | None:intergenic | 30.0% | |
| TCTTTCAATGTTTCTTACAC+AGG | + | Chr4:39864189-39864208 | MsG0480020366.01.T01:intron | 30.0% | |
| ! | ATCATTTGTTAAAGTCAGCA+TGG | - | Chr4:39863262-39863281 | None:intergenic | 30.0% |
| ! | TCATTTGTTAAAGTCAGCAT+GGG | - | Chr4:39863261-39863280 | None:intergenic | 30.0% |
| ! | TTTTATTGGAATTTGCAGGA+TGG | + | Chr4:39863852-39863871 | MsG0480020366.01.T01:intron | 30.0% |
| !! | ACACTCTAAGATAAAATTGG+TGG | - | Chr4:39864309-39864328 | None:intergenic | 30.0% |
| AATTGAATTCGGCAGTACTT+AGG | + | Chr4:39862735-39862754 | MsG0480020366.01.T01:intron | 35.0% | |
| AATTGGGCAAGACAGTATTT+GGG | + | Chr4:39864283-39864302 | MsG0480020366.01.T01:CDS | 35.0% | |
| ACAATGTAGTAGTCATTTGG+TGG | - | Chr4:39862470-39862489 | None:intergenic | 35.0% | |
| ACTACATTGTTGTCACAACA+AGG | + | Chr4:39862480-39862499 | MsG0480020366.01.T01:CDS | 35.0% | |
| ACTCACTTGACATTCATTTG+GGG | + | Chr4:39862411-39862430 | MsG0480020366.01.T01:CDS | 35.0% | |
| AGATTCCGGATATCAAATGT+GGG | + | Chr4:39862299-39862318 | MsG0480020366.01.T01:CDS | 35.0% | |
| ATTGAATTCGGCAGTACTTA+GGG | + | Chr4:39862736-39862755 | MsG0480020366.01.T01:intron | 35.0% | |
| CATTTATTTAACTACCACCG+AGG | - | Chr4:39862807-39862826 | None:intergenic | 35.0% | |
| CCATCAATTTCAGAATCCAA+GGG | + | Chr4:39862333-39862352 | MsG0480020366.01.T01:CDS | 35.0% | |
| CTGAAGATACTTTGCAATCA+TGG | + | Chr4:39863605-39863624 | MsG0480020366.01.T01:CDS | 35.0% | |
| CTGATTACTTCAAGATCCAA+GGG | + | Chr4:39863470-39863489 | MsG0480020366.01.T01:CDS | 35.0% | |
| GAAATACTGGAAAACATGCT+CGG | - | Chr4:39862904-39862923 | None:intergenic | 35.0% | |
| GACATAGCTTCTTTGTAGTA+GGG | + | Chr4:39863638-39863657 | MsG0480020366.01.T01:CDS | 35.0% | |
| GACTCACTTGACATTCATTT+GGG | + | Chr4:39862410-39862429 | MsG0480020366.01.T01:CDS | 35.0% | |
| TAATCCCCACATTTGATATC+CGG | - | Chr4:39862307-39862326 | None:intergenic | 35.0% | |
| TACATGCCATTGGATAATGT+GGG | + | Chr4:39864238-39864257 | MsG0480020366.01.T01:CDS | 35.0% | |
| TCCATCAATTTCAGAATCCA+AGG | + | Chr4:39862332-39862351 | MsG0480020366.01.T01:CDS | 35.0% | |
| TCTTCGAAATTGCGTATGTT+AGG | - | Chr4:39863120-39863139 | None:intergenic | 35.0% | |
| TGACTCACTTGACATTCATT+TGG | + | Chr4:39862409-39862428 | MsG0480020366.01.T01:CDS | 35.0% | |
| TGATTACTTCAAGATCCAAG+GGG | + | Chr4:39863471-39863490 | MsG0480020366.01.T01:CDS | 35.0% | |
| TTATCTTCAGACTTCTGTCA+TGG | + | Chr4:39863540-39863559 | MsG0480020366.01.T01:CDS | 35.0% | |
| ! | AAGCATTAAGCCTTATCACA+AGG | - | Chr4:39863971-39863990 | None:intergenic | 35.0% |
| ! | AAGTAATCAGCTAGTTTGAG+TGG | - | Chr4:39863460-39863479 | None:intergenic | 35.0% |
| ! | AGCATGTTTTCCAGTATTTC+CGG | + | Chr4:39862904-39862923 | MsG0480020366.01.T01:intron | 35.0% |
| ! | AGCATTAAGCCTTATCACAA+GGG | - | Chr4:39863970-39863989 | None:intergenic | 35.0% |
| ! | CATGATTGCAAAGTATCTTC+AGG | - | Chr4:39863607-39863626 | None:intergenic | 35.0% |
| !! | GATTCTGAAATTGATGGATG+TGG | - | Chr4:39862330-39862349 | None:intergenic | 35.0% |
| !! | GTATTCTGTATTGGTTACTG+CGG | + | Chr4:39862439-39862458 | MsG0480020366.01.T01:CDS | 35.0% |
| AATTGCTCGTAGTACAGTTC+AGG | + | Chr4:39863927-39863946 | MsG0480020366.01.T01:CDS | 40.0% | |
| ATCTCTCGATGAATTTGCAG+GGG | - | Chr4:39864335-39864354 | None:intergenic | 40.0% | |
| ATGGAGGATACATGGTTTAC+GGG | - | Chr4:39863736-39863755 | None:intergenic | 40.0% | |
| ATTGGAATTTGCAGGATGGA+TGG | + | Chr4:39863856-39863875 | MsG0480020366.01.T01:intron | 40.0% | |
| CACATTCCCACATTATCCAA+TGG | - | Chr4:39864247-39864266 | None:intergenic | 40.0% | |
| CAGATTCCGGATATCAAATG+TGG | + | Chr4:39862298-39862317 | MsG0480020366.01.T01:CDS | 40.0% | |
| CATCTCTCGATGAATTTGCA+GGG | - | Chr4:39864336-39864355 | None:intergenic | 40.0% | |
| CATGGAGGATACATGGTTTA+CGG | - | Chr4:39863737-39863756 | None:intergenic | 40.0% | |
| CATTGGATAATGTGGGAATG+TGG | + | Chr4:39864245-39864264 | MsG0480020366.01.T01:CDS | 40.0% | |
| CTCCACAAAACCTCGAAAAT+CGG | - | Chr4:39863569-39863588 | None:intergenic | 40.0% | |
| CTTCATTACAGTAACTCTGC+TGG | + | Chr4:39862536-39862555 | MsG0480020366.01.T01:CDS | 40.0% | |
| GAAGTGCATTGCTTGGAATA+GGG | - | Chr4:39864363-39864382 | None:intergenic | 40.0% | |
| GAATGTGAGGTCTGAGAATT+GGG | + | Chr4:39864267-39864286 | MsG0480020366.01.T01:CDS | 40.0% | |
| GAATTGGGCAAGACAGTATT+TGG | + | Chr4:39864282-39864301 | MsG0480020366.01.T01:CDS | 40.0% | |
| GATTCCGGATATCAAATGTG+GGG | + | Chr4:39862300-39862319 | MsG0480020366.01.T01:CDS | 40.0% | |
| GCTGATTACTTCAAGATCCA+AGG | + | Chr4:39863469-39863488 | MsG0480020366.01.T01:CDS | 40.0% | |
| GGACATAGCTTCTTTGTAGT+AGG | + | Chr4:39863637-39863656 | MsG0480020366.01.T01:CDS | 40.0% | |
| GTACATGCCATTGGATAATG+TGG | + | Chr4:39864237-39864256 | MsG0480020366.01.T01:CDS | 40.0% | |
| GTTAAGTGTGCACTATGTTC+CGG | - | Chr4:39862926-39862945 | None:intergenic | 40.0% | |
| TATTTCGATCATGTTGCGCA+TGG | - | Chr4:39863755-39863774 | None:intergenic | 40.0% | |
| TCATCTCTCGATGAATTTGC+AGG | - | Chr4:39864337-39864356 | None:intergenic | 40.0% | |
| TGAAGTGCATTGCTTGGAAT+AGG | - | Chr4:39864364-39864383 | None:intergenic | 40.0% | |
| TGTTCAACGATTGTCAGCAA+TGG | - | Chr4:39863206-39863225 | None:intergenic | 40.0% | |
| TTGAATTCGGCAGTACTTAG+GGG | + | Chr4:39862737-39862756 | MsG0480020366.01.T01:intron | 40.0% | |
| TTGCAATCATGGCACATTGA+TGG | + | Chr4:39863616-39863635 | MsG0480020366.01.T01:CDS | 40.0% | |
| ! | ACACTCGTGAATTTTCACGA+AGG | - | Chr4:39862961-39862980 | None:intergenic | 40.0% |
| !! | CCCTTGGATTCTGAAATTGA+TGG | - | Chr4:39862336-39862355 | None:intergenic | 40.0% |
| !! | GCATAAGATGAAGCTTGTTG+AGG | + | Chr4:39862355-39862374 | MsG0480020366.01.T01:CDS | 40.0% |
| !! | TAAGATGAAGCTTGTTGAGG+TGG | + | Chr4:39862358-39862377 | MsG0480020366.01.T01:CDS | 40.0% |
| !!! | GTTTTCACTTGGAAGTATCC+CGG | + | Chr4:39863495-39863514 | MsG0480020366.01.T01:CDS | 40.0% |
| AGGAGGAATCTTACAGCAAG+TGG | + | Chr4:39863292-39863311 | MsG0480020366.01.T01:intron | 45.0% | |
| AGTTTGAGTGGTGTATCAGC+AGG | - | Chr4:39863448-39863467 | None:intergenic | 45.0% | |
| ATGTGGGAATGTGGAATGTG+AGG | + | Chr4:39864254-39864273 | MsG0480020366.01.T01:CDS | 45.0% | |
| CAAGCTTCATCTTATGCCCT+TGG | - | Chr4:39862352-39862371 | None:intergenic | 45.0% | |
| CACAGGTGTATCCAAAGTCA+TGG | + | Chr4:39864206-39864225 | MsG0480020366.01.T01:intron | 45.0% | |
| CAGGGAAGACTTACAGATTC+CGG | + | Chr4:39862285-39862304 | MsG0480020366.01.T01:CDS | 45.0% | |
| CCACAAGGAACCTACCATTA+TGG | + | Chr4:39863328-39863347 | MsG0480020366.01.T01:CDS | 45.0% | |
| CCATAATGGTAGGTTCCTTG+TGG | - | Chr4:39863331-39863350 | None:intergenic | 45.0% | |
| GACCAACCACTGAAATCGAT+TGG | + | Chr4:39862585-39862604 | MsG0480020366.01.T01:CDS | 45.0% | |
| GCACTATGTTCCGGAAATAC+TGG | - | Chr4:39862917-39862936 | None:intergenic | 45.0% | |
| GGAATGTGAGGTCTGAGAAT+TGG | + | Chr4:39864266-39864285 | MsG0480020366.01.T01:CDS | 45.0% | |
| GTTAAAGTCAGCATGGGACA+CGG | - | Chr4:39863255-39863274 | None:intergenic | 45.0% | |
| GTTCGCTATCCCTTGTGATA+AGG | + | Chr4:39863958-39863977 | MsG0480020366.01.T01:intron | 45.0% | |
| GTTTGAGTGGTGTATCAGCA+GGG | - | Chr4:39863447-39863466 | None:intergenic | 45.0% | |
| TACAGTGCAGTCCATGACTT+TGG | - | Chr4:39864220-39864239 | None:intergenic | 45.0% | |
| TCTTCAGACTTCTGTCATGG+CGG | + | Chr4:39863543-39863562 | MsG0480020366.01.T01:CDS | 45.0% | |
| TGGTAGGTTCCTTGTGGATT+TGG | - | Chr4:39863325-39863344 | None:intergenic | 45.0% | |
| TTCCAAGTGAAAACACCCCT+TGG | - | Chr4:39863489-39863508 | None:intergenic | 45.0% | |
| TTGAACAAGCTCGCTCTCTA+AGG | + | Chr4:39862612-39862631 | MsG0480020366.01.T01:CDS | 45.0% | |
| ! | AACGGACCAATCGATTTCAG+TGG | - | Chr4:39862594-39862613 | None:intergenic | 45.0% |
| ! | CTTGAGATCGAAAGCGTGTT+TGG | - | Chr4:39863229-39863248 | None:intergenic | 45.0% |
| ! | GACCAATCGATTTCAGTGGT+TGG | - | Chr4:39862590-39862609 | None:intergenic | 45.0% |
| ! | GTTCCTTGTGGATTTGGTCT+TGG | - | Chr4:39863319-39863338 | None:intergenic | 45.0% |
| ! | TAGAGAGCGAGCTTGTTCAA+CGG | - | Chr4:39862612-39862631 | None:intergenic | 45.0% |
| !! | AACTCTGCTGGAAGTGTTTC+TGG | + | Chr4:39862548-39862567 | MsG0480020366.01.T01:CDS | 45.0% |
| !! | ATGAAGCTTGTTGAGGTGGA+AGG | + | Chr4:39862362-39862381 | MsG0480020366.01.T01:CDS | 45.0% |
| !! | CGATTTTCGAGGTTTTGTGG+AGG | + | Chr4:39863567-39863586 | MsG0480020366.01.T01:CDS | 45.0% |
| !!! | ATCCAAGGGGTGTTTTCACT+TGG | + | Chr4:39863484-39863503 | MsG0480020366.01.T01:CDS | 45.0% |
| !!! | ATTCTTAATTTTTTTTAAAA+TGG | + | Chr4:39864055-39864074 | MsG0480020366.01.T01:intron | 5.0% |
| CAACCACTTGCACTAGACCT+CGG | + | Chr4:39862787-39862806 | MsG0480020366.01.T01:intron | 50.0% | |
| CAATGCACTTCAGTGTGGCA+AGG | + | Chr4:39864372-39864391 | MsG0480020366.01.T01:CDS | 50.0% | |
| CACAACAAGGTTCACGTCAC+AGG | + | Chr4:39862493-39862512 | MsG0480020366.01.T01:CDS | 50.0% | |
| CCAAGCAATGCACTTCAGTG+TGG | + | Chr4:39864367-39864386 | MsG0480020366.01.T01:CDS | 50.0% | |
| CCACACTGAAGTGCATTGCT+TGG | - | Chr4:39864370-39864389 | None:intergenic | 50.0% | |
| GACTGCACTGTACATGCCAT+TGG | + | Chr4:39864228-39864247 | MsG0480020366.01.T01:CDS | 50.0% | |
| GGAATTTGCAGGATGGATGG+AGG | + | Chr4:39863859-39863878 | MsG0480020366.01.T01:intron | 50.0% | |
| GGACCAAGACCAAATCCACA+AGG | + | Chr4:39863313-39863332 | MsG0480020366.01.T01:CDS | 50.0% | |
| GGGGCAGACGTATTCTGTAT+TGG | + | Chr4:39862430-39862449 | MsG0480020366.01.T01:CDS | 50.0% | |
| TGTTGCGCATGGAGGATACA+TGG | - | Chr4:39863744-39863763 | None:intergenic | 50.0% | |
| TTCGATCATGTTGCGCATGG+AGG | - | Chr4:39863752-39863771 | None:intergenic | 50.0% | |
| ! | ATTTCAGTGGTTGGTCCAGC+AGG | - | Chr4:39862581-39862600 | None:intergenic | 50.0% |
| !! | GGCCGATTTTCGAGGTTTTG+TGG | + | Chr4:39863564-39863583 | MsG0480020366.01.T01:CDS | 50.0% |
| ACTTCAGTGTGGCAAGGCAG+TGG | + | Chr4:39864378-39864397 | MsG0480020366.01.T01:CDS | 55.0% | |
| CGAGGTCTAGTGCAAGTGGT+TGG | - | Chr4:39862789-39862808 | None:intergenic | 55.0% | |
| CTGGAAAACATGCTCGGCAG+TGG | - | Chr4:39862898-39862917 | None:intergenic | 55.0% | |
| CTTCAGTGTGGCAAGGCAGT+GGG | + | Chr4:39864379-39864398 | MsG0480020366.01.T01:CDS | 55.0% | |
| GCAGGATGGATGGAGGACAA+TGG | + | Chr4:39863866-39863885 | MsG0480020366.01.T01:intron | 55.0% | |
| !! | GTTTCTGGTCCTCTTCCTGC+TGG | + | Chr4:39862563-39862582 | MsG0480020366.01.T01:CDS | 55.0% |
| AGTATCCCGGACAACCCCAC+CGG | + | Chr4:39863508-39863527 | MsG0480020366.01.T01:CDS | 60.0% | |
| CCACCGAGGTCTAGTGCAAG+TGG | - | Chr4:39862793-39862812 | None:intergenic | 60.0% | |
| CCACTTGCACTAGACCTCGG+TGG | + | Chr4:39862790-39862809 | MsG0480020366.01.T01:intron | 60.0% | |
| CTGAAGATAACCGCCGCCAC+CGG | - | Chr4:39863530-39863549 | None:intergenic | 60.0% | |
| ! | GTGGTTGGTCCAGCAGGAAG+AGG | - | Chr4:39862575-39862594 | None:intergenic | 60.0% |
| !! | GTCATGGCGGCCGATTTTCG+AGG | + | Chr4:39863556-39863575 | MsG0480020366.01.T01:CDS | 60.0% |
| AAGATAACCGCCGCCACCGG+TGG | - | Chr4:39863527-39863546 | None:intergenic | 65.0% | |
| AGATAACCGCCGCCACCGGT+GGG | - | Chr4:39863526-39863545 | None:intergenic | 65.0% | |
| ATCCCGGACAACCCCACCGG+TGG | + | Chr4:39863511-39863530 | MsG0480020366.01.T01:CDS | 70.0% | |
| GATAACCGCCGCCACCGGTG+GGG | - | Chr4:39863525-39863544 | None:intergenic | 70.0% | |
| CCGCCACCGGTGGGGTTGTC+CGG | - | Chr4:39863517-39863536 | None:intergenic | 75.0% | |
| CCGGACAACCCCACCGGTGG+CGG | + | Chr4:39863514-39863533 | MsG0480020366.01.T01:CDS | 75.0% | |
| CGCCACCGGTGGGGTTGTCC+GGG | - | Chr4:39863516-39863535 | None:intergenic | 75.0% | |
| ! | GACAACCCCACCGGTGGCGG+CGG | + | Chr4:39863517-39863536 | MsG0480020366.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 39862278 | 39864414 | 39862278 | ID=MsG0480020366.01;Name=MsG0480020366.01 |
| Chr4 | mRNA | 39862278 | 39864414 | 39862278 | ID=MsG0480020366.01.T01;Parent=MsG0480020366.01;Name=MsG0480020366.01.T01;_AED=0.40;_eAED=0.41;_QI=0|0|0|1|1|1|4|0|334 |
| Chr4 | exon | 39862278 | 39862633 | 39862278 | ID=MsG0480020366.01.T01:exon:16746;Parent=MsG0480020366.01.T01 |
| Chr4 | exon | 39863294 | 39863659 | 39863294 | ID=MsG0480020366.01.T01:exon:16747;Parent=MsG0480020366.01.T01 |
| Chr4 | exon | 39863870 | 39863948 | 39863870 | ID=MsG0480020366.01.T01:exon:16748;Parent=MsG0480020366.01.T01 |
| Chr4 | exon | 39864211 | 39864414 | 39864211 | ID=MsG0480020366.01.T01:exon:16749;Parent=MsG0480020366.01.T01 |
| Chr4 | CDS | 39862278 | 39862633 | 39862278 | ID=MsG0480020366.01.T01:cds;Parent=MsG0480020366.01.T01 |
| Chr4 | CDS | 39863294 | 39863659 | 39863294 | ID=MsG0480020366.01.T01:cds;Parent=MsG0480020366.01.T01 |
| Chr4 | CDS | 39863870 | 39863948 | 39863870 | ID=MsG0480020366.01.T01:cds;Parent=MsG0480020366.01.T01 |
| Chr4 | CDS | 39864211 | 39864414 | 39864211 | ID=MsG0480020366.01.T01:cds;Parent=MsG0480020366.01.T01 |
| Gene Sequence |
| Protein sequence |
