Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046635.01.T01 | XP_003609162.2 | 81.818 | 341 | 10 | 1 | 1 | 289 | 7 | 347 | 0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046635.01.T01 | P94111 | 35.855 | 304 | 135 | 6 | 34 | 285 | 27 | 322 | 4.73E-49 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046635.01.T01 | A0A396IE01 | 81.818 | 341 | 10 | 1 | 1 | 289 | 7 | 347 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880046579.01 | MsG0880046635.01 | 0.811991 | 5.307531e-51 | 3.333994e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880046635.01 | MsG0880046636.01 | PPI |
| MsG0880046579.01 | MsG0880046635.01 | PPI |
| MsG0880046635.01 | MsG0280009252.01 | PPI |
| MsG0880046635.01 | MsG0880046580.01 | PPI |
| MsG0880046635.01 | MsG0880046634.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046635.01.T01 | MTR_4g112650 | 81.437 | 334 | 10 | 1 | 8 | 289 | 1 | 334 | 0.0 | 535 |
| MsG0880046635.01.T01 | MTR_4g112620 | 77.346 | 309 | 41 | 4 | 1 | 289 | 1 | 300 | 5.71e-167 | 465 |
| MsG0880046635.01.T01 | MTR_4g112630 | 68.155 | 336 | 44 | 2 | 8 | 290 | 1 | 326 | 1.54e-157 | 442 |
| MsG0880046635.01.T01 | MTR_4g112670 | 66.366 | 333 | 60 | 2 | 8 | 288 | 2 | 334 | 2.31e-151 | 427 |
| MsG0880046635.01.T01 | MTR_2g058450 | 43.934 | 305 | 120 | 2 | 33 | 286 | 28 | 332 | 2.53e-77 | 239 |
| MsG0880046635.01.T01 | MTR_0003s0530 | 54.696 | 181 | 30 | 2 | 152 | 280 | 1 | 181 | 3.88e-57 | 182 |
| MsG0880046635.01.T01 | MTR_7g490330 | 32.923 | 325 | 144 | 6 | 16 | 284 | 13 | 319 | 2.93e-49 | 166 |
| MsG0880046635.01.T01 | MTR_2g058410 | 40.517 | 232 | 87 | 1 | 109 | 289 | 1 | 232 | 3.94e-46 | 155 |
| MsG0880046635.01.T01 | MTR_7g490350 | 28.415 | 366 | 176 | 6 | 2 | 284 | 1 | 363 | 5.16e-46 | 159 |
| MsG0880046635.01.T01 | MTR_5g091980 | 33.677 | 291 | 123 | 5 | 44 | 284 | 47 | 317 | 1.02e-44 | 154 |
| MsG0880046635.01.T01 | MTR_7g090300 | 29.891 | 368 | 162 | 8 | 8 | 284 | 1 | 363 | 1.65e-43 | 152 |
| MsG0880046635.01.T01 | MTR_2g087780 | 31.563 | 339 | 145 | 8 | 32 | 288 | 60 | 393 | 2.09e-39 | 142 |
| MsG0880046635.01.T01 | MTR_7g090320 | 30.612 | 343 | 144 | 8 | 35 | 288 | 48 | 385 | 4.01e-39 | 141 |
| MsG0880046635.01.T01 | MTR_4g050190 | 31.498 | 327 | 138 | 8 | 43 | 288 | 68 | 389 | 2.72e-38 | 139 |
| MsG0880046635.01.T01 | MTR_2g099030 | 26.190 | 336 | 167 | 4 | 33 | 288 | 70 | 404 | 1.65e-36 | 134 |
| MsG0880046635.01.T01 | MTR_7g090310 | 30.275 | 327 | 145 | 7 | 45 | 288 | 58 | 384 | 6.38e-35 | 130 |
| MsG0880046635.01.T01 | MTR_5g077620 | 73.810 | 84 | 19 | 3 | 11 | 94 | 2 | 82 | 2.15e-32 | 117 |
| MsG0880046635.01.T01 | MTR_4g112840 | 76.923 | 52 | 12 | 0 | 177 | 228 | 104 | 155 | 2.23e-21 | 89.0 |
| MsG0880046635.01.T01 | MTR_2g058430 | 48.958 | 96 | 40 | 1 | 82 | 177 | 43 | 129 | 5.80e-21 | 90.1 |
| MsG0880046635.01.T01 | MTR_5g093640 | 40.816 | 98 | 12 | 2 | 193 | 290 | 52 | 103 | 9.91e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046635.01.T01 | AT1G74020 | 35.855 | 304 | 135 | 6 | 34 | 285 | 27 | 322 | 4.82e-50 | 168 |
| MsG0880046635.01.T01 | AT3G57030 | 32.492 | 317 | 135 | 4 | 44 | 284 | 55 | 368 | 3.43e-48 | 165 |
| MsG0880046635.01.T01 | AT1G74010 | 35.644 | 303 | 136 | 7 | 34 | 285 | 26 | 320 | 2.31e-46 | 159 |
| MsG0880046635.01.T01 | AT1G74000 | 34.323 | 303 | 141 | 6 | 34 | 285 | 29 | 324 | 4.02e-46 | 158 |
| MsG0880046635.01.T01 | AT3G57010 | 34.711 | 242 | 102 | 3 | 32 | 223 | 41 | 276 | 1.12e-44 | 155 |
| MsG0880046635.01.T01 | AT1G08470 | 33.333 | 321 | 131 | 8 | 43 | 284 | 67 | 383 | 1.09e-43 | 153 |
| MsG0880046635.01.T01 | AT3G57020 | 33.197 | 244 | 107 | 2 | 32 | 225 | 40 | 277 | 1.11e-40 | 145 |
| MsG0880046635.01.T01 | AT5G22020 | 31.902 | 326 | 137 | 10 | 43 | 288 | 73 | 393 | 1.01e-39 | 143 |
| MsG0880046635.01.T01 | AT5G22020 | 31.902 | 326 | 137 | 10 | 43 | 288 | 73 | 393 | 1.01e-39 | 143 |
| MsG0880046635.01.T01 | AT5G22020 | 31.902 | 326 | 137 | 10 | 43 | 288 | 73 | 393 | 1.01e-39 | 143 |
| MsG0880046635.01.T01 | AT2G41290 | 32.407 | 324 | 133 | 10 | 45 | 285 | 51 | 371 | 4.56e-38 | 138 |
| MsG0880046635.01.T01 | AT3G57020 | 31.276 | 243 | 97 | 2 | 32 | 224 | 40 | 262 | 5.40e-36 | 132 |
| MsG0880046635.01.T01 | AT2G41300 | 27.922 | 308 | 140 | 5 | 50 | 281 | 83 | 384 | 8.80e-35 | 130 |
| MsG0880046635.01.T01 | AT3G59530 | 29.508 | 244 | 116 | 3 | 36 | 224 | 75 | 317 | 1.34e-31 | 121 |
| MsG0880046635.01.T01 | AT3G59530 | 29.508 | 244 | 116 | 3 | 36 | 224 | 75 | 317 | 1.34e-31 | 121 |
| MsG0880046635.01.T01 | AT3G59530 | 29.508 | 244 | 116 | 3 | 36 | 224 | 75 | 317 | 1.34e-31 | 121 |
Find 71 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTCAGGAGGCCAATTT+TGG | 0.196374 | 8:+75976726 | MsG0880046635.01.T01:CDS |
| TATGTAGCTGATGCTTATTT+TGG | 0.237520 | 8:+75975935 | MsG0880046635.01.T01:CDS |
| TACTAACTGATATCCAAAAT+TGG | 0.256590 | 8:-75976739 | None:intergenic |
| GAATTCCTCTTGATGTTATC+TGG | 0.291665 | 8:-75976710 | None:intergenic |
| GCAATATGTGGAAGACCTTT+AGG | 0.300362 | 8:+75975881 | MsG0880046635.01.T01:CDS |
| GATAACATCAAGAGGAATTC+AGG | 0.341738 | 8:+75976713 | MsG0880046635.01.T01:CDS |
| AAATATGTTGGTTCAAATGA+AGG | 0.369592 | 8:+75975495 | MsG0880046635.01.T01:CDS |
| CTTGATGTTATCTGGTCTTC+CGG | 0.376966 | 8:-75976702 | None:intergenic |
| ATCGGCAAACATAGTTGAAT+TGG | 0.376978 | 8:-75976017 | None:intergenic |
| AACTATGTTTGCCGATGGTT+TGG | 0.379978 | 8:+75976024 | MsG0880046635.01.T01:CDS |
| TGAGTTGCATTCCCACCATT+GGG | 0.382610 | 8:-75975974 | None:intergenic |
| GAATTATTCATGCTACTTGC+CGG | 0.383828 | 8:+75976683 | MsG0880046635.01.T01:CDS |
| TGAACCTCACTAGCCGCTTC+AGG | 0.389938 | 8:-75976872 | None:intergenic |
| GTGTCTCTTGTTGAAGAGTA+TGG | 0.394726 | 8:+75976848 | MsG0880046635.01.T01:CDS |
| GGATGTTCTACTTTACCTTC+AGG | 0.402383 | 8:+75976788 | MsG0880046635.01.T01:CDS |
| TGTGGAAGACCTTTAGGATT+GGG | 0.405892 | 8:+75975887 | MsG0880046635.01.T01:CDS |
| GGTGTTAGAGTGAATGAAAA+TGG | 0.407349 | 8:+75976809 | MsG0880046635.01.T01:CDS |
| TTGAGTTGCATTCCCACCAT+TGG | 0.429082 | 8:-75975975 | None:intergenic |
| GTAGAACATCCTGGAGATCT+TGG | 0.431021 | 8:-75976776 | None:intergenic |
| GATTTATATATTTACCTGTT+GGG | 0.432026 | 8:-75975543 | None:intergenic |
| GAGTACAATGGAACACTCTA+TGG | 0.432828 | 8:+75976896 | MsG0880046635.01.T01:CDS |
| CGATGGTTTGGATGTAGATC+CGG | 0.453120 | 8:+75976036 | MsG0880046635.01.T01:CDS |
| TGGTTCAAATGAAGGTTTCA+AGG | 0.454128 | 8:+75975503 | MsG0880046635.01.T01:CDS |
| TCAGGTCCTGTCACTGGTGC+TGG | 0.455170 | 8:-75975408 | None:intergenic |
| CTGAAGCTTGTTCAGTAATA+CGG | 0.466301 | 8:-75975382 | None:intergenic |
| CTTGTTAAGGTTGGCCCCAA+TGG | 0.472047 | 8:+75975959 | MsG0880046635.01.T01:CDS |
| AGTAATACGGCTACCGATGA+TGG | 0.472632 | 8:-75975369 | None:intergenic |
| AAGGTCTTCCACATATTGCT+TGG | 0.472662 | 8:-75975877 | None:intergenic |
| TTAGGGACACCAAGATCTCC+AGG | 0.481801 | 8:+75976767 | MsG0880046635.01.T01:CDS |
| ATGCTTACACTTCTCCCAAC+AGG | 0.489728 | 8:+75975529 | MsG0880046635.01.T01:CDS |
| GTTAAGGTTGGCCCCAATGG+TGG | 0.492288 | 8:+75975962 | MsG0880046635.01.T01:CDS |
| ATGTGGAAGACCTTTAGGAT+TGG | 0.494905 | 8:+75975886 | MsG0880046635.01.T01:CDS |
| AAATAAACGACTCCAGTGTC+CGG | 0.502679 | 8:-75976055 | None:intergenic |
| GGGAATGCAACTCAATTAGT+TGG | 0.502687 | 8:+75975983 | MsG0880046635.01.T01:CDS |
| AGTGACTCAGGTCCTGTCAC+TGG | 0.505698 | 8:-75975414 | None:intergenic |
| TCATTCACTCTAACACCTGA+AGG | 0.522134 | 8:-75976803 | None:intergenic |
| CTATCAAATGCAAGTGACTC+AGG | 0.525659 | 8:-75975426 | None:intergenic |
| CCATCAGAAGAAGTAACATA+AGG | 0.525792 | 8:-75975462 | None:intergenic |
| TCTACTGCGTTCTCCATCAT+CGG | 0.525948 | 8:+75975356 | MsG0880046635.01.T01:CDS |
| CCTTATGTTACTTCTTCTGA+TGG | 0.527626 | 8:+75975462 | MsG0880046635.01.T01:CDS |
| GACAGTGACAACCATCGACT+TGG | 0.528736 | 8:-75975316 | None:intergenic |
| TCACTTGCATTTGATAGAAA+CGG | 0.530670 | 8:+75975432 | MsG0880046635.01.T01:CDS |
| AGGTTGCATAAGAAGCAAGC+AGG | 0.532375 | 8:-75976925 | None:intergenic |
| ATTCAGCGAGTGTGGTTGAA+AGG | 0.546046 | 8:+75976641 | MsG0880046635.01.T01:CDS |
| TCAGTAGTCCAAGCAATATG+TGG | 0.548585 | 8:+75975869 | MsG0880046635.01.T01:CDS |
| AATTCTGATGAATTTGCTCT+CGG | 0.549648 | 8:-75976665 | None:intergenic |
| CAGCTACCAGCACCAGTGAC+AGG | 0.551193 | 8:+75975402 | MsG0880046635.01.T01:CDS |
| GAAGGTAAAGTAGAACATCC+TGG | 0.568828 | 8:-75976785 | None:intergenic |
| AATTCAACTATGTTTGCCGA+TGG | 0.570302 | 8:+75976019 | MsG0880046635.01.T01:CDS |
| CAAACAGAATTCAGCGAGTG+TGG | 0.570481 | 8:+75976633 | MsG0880046635.01.T01:CDS |
| TAATACCATGTCCAAGTCGA+TGG | 0.572475 | 8:+75975305 | MsG0880046635.01.T01:CDS |
| TTAAGGTTGGCCCCAATGGT+GGG | 0.574022 | 8:+75975963 | MsG0880046635.01.T01:CDS |
| TTGGATGTAGATCCGGACAC+TGG | 0.580301 | 8:+75976043 | MsG0880046635.01.T01:CDS |
| TGATTGAAACCCAATCCTAA+AGG | 0.582627 | 8:-75975896 | None:intergenic |
| TGGTCCTGAAGCGGCTAGTG+AGG | 0.589941 | 8:+75976868 | MsG0880046635.01.T01:CDS |
| ATAGTTGAATTGGCTTGTGT+CGG | 0.596354 | 8:-75976007 | None:intergenic |
| GGTTGCATAAGAAGCAAGCA+GGG | 0.600341 | 8:-75976924 | None:intergenic |
| CTTGTAATTAGAGCTAGCTA+TGG | 0.601850 | 8:-75976080 | None:intergenic |
| AAAACTCTAGGGAGTAAATG+AGG | 0.602595 | 8:-75976945 | None:intergenic |
| CGGATCTACATCCAAACCAT+CGG | 0.609491 | 8:-75976035 | None:intergenic |
| GACAACCATCGACTTGGACA+TGG | 0.613511 | 8:-75975310 | None:intergenic |
| GCATTTGATAGAAACGGTGG+AGG | 0.636595 | 8:+75975438 | MsG0880046635.01.T01:CDS |
| AGGAATAGGACAGTCTGTGA+TGG | 0.636740 | 8:+75975833 | MsG0880046635.01.T01:intron |
| GAGTTGCATTCCCACCATTG+GGG | 0.641897 | 8:-75975973 | None:intergenic |
| CTTGCATTTGATAGAAACGG+TGG | 0.644459 | 8:+75975435 | MsG0880046635.01.T01:CDS |
| GAAGACCAGATAACATCAAG+AGG | 0.646688 | 8:+75976705 | MsG0880046635.01.T01:CDS |
| TACAATGGAACACTCTATGG+TGG | 0.656288 | 8:+75976899 | MsG0880046635.01.T01:CDS |
| AGTGAGGTTCAAGAGTACAA+TGG | 0.673039 | 8:+75976884 | MsG0880046635.01.T01:CDS |
| TGAAGAGTATGGTCCTGAAG+CGG | 0.674281 | 8:+75976859 | MsG0880046635.01.T01:CDS |
| GGACTACTGAGAAGTCAGCA+AGG | 0.682750 | 8:-75975856 | None:intergenic |
| AACATCAAGAGGAATTCAGG+AGG | 0.698815 | 8:+75976716 | MsG0880046635.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTATATTATTGTTTA+TGG | + | Chr8:75976410-75976429 | MsG0880046635.01.T01:intron | 10.0% |
| !!! | ATGACTGTTTTTTATTTTTT+TGG | + | Chr8:75975807-75975826 | MsG0880046635.01.T01:intron | 15.0% |
| !! | AAGCAAAAATAGAAAATAAC+AGG | - | Chr8:75976366-75976385 | None:intergenic | 20.0% |
| !! | GATTTATATATTTACCTGTT+GGG | - | Chr8:75975546-75975565 | None:intergenic | 20.0% |
| !! | TGATTTATATATTTACCTGT+TGG | - | Chr8:75975547-75975566 | None:intergenic | 20.0% |
| !!! | ATATCAGTTAGTAGTTTTTT+AGG | + | Chr8:75976749-75976768 | MsG0880046635.01.T01:CDS | 20.0% |
| !!! | GATATTTTATGAGAAGAAAT+GGG | - | Chr8:75976164-75976183 | None:intergenic | 20.0% |
| !!! | GTTTTTTATTTTTTTGGTTC+AGG | + | Chr8:75975813-75975832 | MsG0880046635.01.T01:intron | 20.0% |
| !!! | TATCAGTTAGTAGTTTTTTA+GGG | + | Chr8:75976750-75976769 | MsG0880046635.01.T01:CDS | 20.0% |
| !!! | TGATATTTTATGAGAAGAAA+TGG | - | Chr8:75976165-75976184 | None:intergenic | 20.0% |
| ! | TACTAACTGATATCCAAAAT+TGG | - | Chr8:75976742-75976761 | None:intergenic | 25.0% |
| !! | GGAAGAATTTTCAAATATGT+TGG | + | Chr8:75975483-75975502 | MsG0880046635.01.T01:CDS | 25.0% |
| !!! | AAATATGTTGGTTCAAATGA+AGG | + | Chr8:75975495-75975514 | MsG0880046635.01.T01:CDS | 25.0% |
| !!! | TATTTTTTTGGTTCAGGAAT+AGG | + | Chr8:75975819-75975838 | MsG0880046635.01.T01:intron | 25.0% |
| TCACTTGCATTTGATAGAAA+CGG | + | Chr8:75975432-75975451 | MsG0880046635.01.T01:CDS | 30.0% | |
| TGAATCCTACAAATTATTCG+AGG | - | Chr8:75976394-75976413 | None:intergenic | 30.0% | |
| ! | AATTCTGATGAATTTGCTCT+CGG | - | Chr8:75976668-75976687 | None:intergenic | 30.0% |
| ! | AGATGCTTTCTAAAAGAACA+CGG | - | Chr8:75975675-75975694 | None:intergenic | 30.0% |
| ! | TATGTAGCTGATGCTTATTT+TGG | + | Chr8:75975935-75975954 | MsG0880046635.01.T01:CDS | 30.0% |
| ! | TCTTTCCTCGAATAATTTGT+AGG | + | Chr8:75976386-75976405 | MsG0880046635.01.T01:intron | 30.0% |
| !!! | TATTTTGGACTTGTTAAGGT+TGG | + | Chr8:75975950-75975969 | MsG0880046635.01.T01:CDS | 30.0% |
| !!! | TGCTTATTTTGGACTTGTTA+AGG | + | Chr8:75975946-75975965 | MsG0880046635.01.T01:CDS | 30.0% |
| AACGATCACTTGATTCATGT+TGG | - | Chr8:75975586-75975605 | None:intergenic | 35.0% | |
| AATTCAACTATGTTTGCCGA+TGG | + | Chr8:75976019-75976038 | MsG0880046635.01.T01:CDS | 35.0% | |
| ACCTCAATATCTTACATGGA+TGG | + | Chr8:75976334-75976353 | MsG0880046635.01.T01:intron | 35.0% | |
| ACGATCACTTGATTCATGTT+GGG | - | Chr8:75975585-75975604 | None:intergenic | 35.0% | |
| ATCGGCAAACATAGTTGAAT+TGG | - | Chr8:75976020-75976039 | None:intergenic | 35.0% | |
| CCATCAGAAGAAGTAACATA+AGG | - | Chr8:75975465-75975484 | None:intergenic | 35.0% | |
| CTTGTAATTAGAGCTAGCTA+TGG | - | Chr8:75976083-75976102 | None:intergenic | 35.0% | |
| GAATTCCTCTTGATGTTATC+TGG | - | Chr8:75976713-75976732 | None:intergenic | 35.0% | |
| GATAACATCAAGAGGAATTC+AGG | + | Chr8:75976713-75976732 | MsG0880046635.01.T01:CDS | 35.0% | |
| GGTGTTAGAGTGAATGAAAA+TGG | + | Chr8:75976809-75976828 | MsG0880046635.01.T01:CDS | 35.0% | |
| TCCATCCATGTAAGATATTG+AGG | - | Chr8:75976338-75976357 | None:intergenic | 35.0% | |
| TGACAAATGTGAATGTCACT+TGG | + | Chr8:75976434-75976453 | MsG0880046635.01.T01:intron | 35.0% | |
| TGATTGAAACCCAATCCTAA+AGG | - | Chr8:75975899-75975918 | None:intergenic | 35.0% | |
| TGCTTGGATCATATCTCAAT+AGG | - | Chr8:75976518-75976537 | None:intergenic | 35.0% | |
| TGGTTCAAATGAAGGTTTCA+AGG | + | Chr8:75975503-75975522 | MsG0880046635.01.T01:CDS | 35.0% | |
| TTCTTAGCAACACTGTTGTT+TGG | - | Chr8:75976544-75976563 | None:intergenic | 35.0% | |
| ! | CCTTATGTTACTTCTTCTGA+TGG | + | Chr8:75975462-75975481 | MsG0880046635.01.T01:CDS | 35.0% |
| ! | CTGAAGCTTGTTCAGTAATA+CGG | - | Chr8:75975385-75975404 | None:intergenic | 35.0% |
| ! | GAATTATTCATGCTACTTGC+CGG | + | Chr8:75976683-75976702 | MsG0880046635.01.T01:CDS | 35.0% |
| !! | ATAGTTGAATTGGCTTGTGT+CGG | - | Chr8:75976010-75976029 | None:intergenic | 35.0% |
| AAATAAACGACTCCAGTGTC+CGG | - | Chr8:75976058-75976077 | None:intergenic | 40.0% | |
| AACATCAAGAGGAATTCAGG+AGG | + | Chr8:75976716-75976735 | MsG0880046635.01.T01:CDS | 40.0% | |
| AACTATGTTTGCCGATGGTT+TGG | + | Chr8:75976024-75976043 | MsG0880046635.01.T01:CDS | 40.0% | |
| AAGGTCTTCCACATATTGCT+TGG | - | Chr8:75975880-75975899 | None:intergenic | 40.0% | |
| AGAAATCTTACAGTGCCATC+TGG | + | Chr8:75976560-75976579 | MsG0880046635.01.T01:intron | 40.0% | |
| CTATCAAATGCAAGTGACTC+AGG | - | Chr8:75975429-75975448 | None:intergenic | 40.0% | |
| CTTGCATTTGATAGAAACGG+TGG | + | Chr8:75975435-75975454 | MsG0880046635.01.T01:CDS | 40.0% | |
| GAAGACCAGATAACATCAAG+AGG | + | Chr8:75976705-75976724 | MsG0880046635.01.T01:CDS | 40.0% | |
| GAAGGTAAAGTAGAACATCC+TGG | - | Chr8:75976788-75976807 | None:intergenic | 40.0% | |
| GAGTACAATGGAACACTCTA+TGG | + | Chr8:75976896-75976915 | MsG0880046635.01.T01:CDS | 40.0% | |
| GCAATATGTGGAAGACCTTT+AGG | + | Chr8:75975881-75975900 | MsG0880046635.01.T01:CDS | 40.0% | |
| GGATGTTCTACTTTACCTTC+AGG | + | Chr8:75976788-75976807 | MsG0880046635.01.T01:CDS | 40.0% | |
| GGGAATGCAACTCAATTAGT+TGG | + | Chr8:75975983-75976002 | MsG0880046635.01.T01:CDS | 40.0% | |
| GTGTCTCTTGTTGAAGAGTA+TGG | + | Chr8:75976848-75976867 | MsG0880046635.01.T01:CDS | 40.0% | |
| TAATACCATGTCCAAGTCGA+TGG | + | Chr8:75975305-75975324 | MsG0880046635.01.T01:CDS | 40.0% | |
| TACAATGGAACACTCTATGG+TGG | + | Chr8:75976899-75976918 | MsG0880046635.01.T01:CDS | 40.0% | |
| TCAGTAGTCCAAGCAATATG+TGG | + | Chr8:75975869-75975888 | MsG0880046635.01.T01:CDS | 40.0% | |
| TCATTCACTCTAACACCTGA+AGG | - | Chr8:75976806-75976825 | None:intergenic | 40.0% | |
| TTACAGAGATTTCCAGACAG+TGG | + | Chr8:75976461-75976480 | MsG0880046635.01.T01:intron | 40.0% | |
| ! | AGTGAGGTTCAAGAGTACAA+TGG | + | Chr8:75976884-75976903 | MsG0880046635.01.T01:CDS | 40.0% |
| ! | CTTGATGTTATCTGGTCTTC+CGG | - | Chr8:75976705-75976724 | None:intergenic | 40.0% |
| ! | TTAGCAACACTGTTGTTTGG+TGG | - | Chr8:75976541-75976560 | None:intergenic | 40.0% |
| !! | ATGTGGAAGACCTTTAGGAT+TGG | + | Chr8:75975886-75975905 | MsG0880046635.01.T01:CDS | 40.0% |
| !! | TGTGGAAGACCTTTAGGATT+GGG | + | Chr8:75975887-75975906 | MsG0880046635.01.T01:CDS | 40.0% |
| AGGAATAGGACAGTCTGTGA+TGG | + | Chr8:75975833-75975852 | MsG0880046635.01.T01:intron | 45.0% | |
| AGGTTGCATAAGAAGCAAGC+AGG | - | Chr8:75976928-75976947 | None:intergenic | 45.0% | |
| AGTAATACGGCTACCGATGA+TGG | - | Chr8:75975372-75975391 | None:intergenic | 45.0% | |
| AGTGGCAGTGGAGATAATTC+AGG | + | Chr8:75976489-75976508 | MsG0880046635.01.T01:intron | 45.0% | |
| ATGCTTACACTTCTCCCAAC+AGG | + | Chr8:75975529-75975548 | MsG0880046635.01.T01:CDS | 45.0% | |
| ATTCAGCGAGTGTGGTTGAA+AGG | + | Chr8:75976641-75976660 | MsG0880046635.01.T01:CDS | 45.0% | |
| CAAACAGAATTCAGCGAGTG+TGG | + | Chr8:75976633-75976652 | MsG0880046635.01.T01:CDS | 45.0% | |
| CGGATCTACATCCAAACCAT+CGG | - | Chr8:75976038-75976057 | None:intergenic | 45.0% | |
| GCATTTGATAGAAACGGTGG+AGG | + | Chr8:75975438-75975457 | MsG0880046635.01.T01:CDS | 45.0% | |
| GCGCACCTCAATATCTTACA+TGG | + | Chr8:75976330-75976349 | MsG0880046635.01.T01:intron | 45.0% | |
| GGTTGCATAAGAAGCAAGCA+GGG | - | Chr8:75976927-75976946 | None:intergenic | 45.0% | |
| GTAGAACATCCTGGAGATCT+TGG | - | Chr8:75976779-75976798 | None:intergenic | 45.0% | |
| TCTACTGCGTTCTCCATCAT+CGG | + | Chr8:75975356-75975375 | MsG0880046635.01.T01:CDS | 45.0% | |
| TGAGTTGCATTCCCACCATT+GGG | - | Chr8:75975977-75975996 | None:intergenic | 45.0% | |
| ! | CGATGGTTTGGATGTAGATC+CGG | + | Chr8:75976036-75976055 | MsG0880046635.01.T01:CDS | 45.0% |
| ! | GGAATTCAGGAGGCCAATTT+TGG | + | Chr8:75976726-75976745 | MsG0880046635.01.T01:CDS | 45.0% |
| ! | TGAAGAGTATGGTCCTGAAG+CGG | + | Chr8:75976859-75976878 | MsG0880046635.01.T01:CDS | 45.0% |
| ! | TTGAGTTGCATTCCCACCAT+TGG | - | Chr8:75975978-75975997 | None:intergenic | 45.0% |
| GAGTTGCATTCCCACCATTG+GGG | - | Chr8:75975976-75975995 | None:intergenic | 50.0% | |
| GGACTACTGAGAAGTCAGCA+AGG | - | Chr8:75975859-75975878 | None:intergenic | 50.0% | |
| GGAGTGGCAGTAAGCAAAGA+TGG | + | Chr8:75976581-75976600 | MsG0880046635.01.T01:intron | 50.0% | |
| TCTTACAGTGCCATCTGGAG+TGG | + | Chr8:75976565-75976584 | MsG0880046635.01.T01:intron | 50.0% | |
| TTAGGGACACCAAGATCTCC+AGG | + | Chr8:75976767-75976786 | MsG0880046635.01.T01:CDS | 50.0% | |
| TTCCAGACAGTGGTAGCTAG+TGG | + | Chr8:75976471-75976490 | MsG0880046635.01.T01:intron | 50.0% | |
| TTGCTTACTGCCACTCCAGA+TGG | - | Chr8:75976578-75976597 | None:intergenic | 50.0% | |
| TTGGATGTAGATCCGGACAC+TGG | + | Chr8:75976043-75976062 | MsG0880046635.01.T01:CDS | 50.0% | |
| ! | CTTGTTAAGGTTGGCCCCAA+TGG | + | Chr8:75975959-75975978 | MsG0880046635.01.T01:CDS | 50.0% |
| ! | GACAGTGACAACCATCGACT+TGG | - | Chr8:75975319-75975338 | None:intergenic | 50.0% |
| ! | TTAAGGTTGGCCCCAATGGT+GGG | + | Chr8:75975963-75975982 | MsG0880046635.01.T01:CDS | 50.0% |
| !! | CACTGTTGTTTGGTGGTGCT+TGG | - | Chr8:75976534-75976553 | None:intergenic | 50.0% |
| !! | GACAACCATCGACTTGGACA+TGG | - | Chr8:75975313-75975332 | None:intergenic | 50.0% |
| ACAGTGGTAGCTAGTGGCAG+TGG | + | Chr8:75976477-75976496 | MsG0880046635.01.T01:intron | 55.0% | |
| AGTGACTCAGGTCCTGTCAC+TGG | - | Chr8:75975417-75975436 | None:intergenic | 55.0% | |
| TGAACCTCACTAGCCGCTTC+AGG | - | Chr8:75976875-75976894 | None:intergenic | 55.0% | |
| TGCCACTAGCTACCACTGTC+TGG | - | Chr8:75976476-75976495 | None:intergenic | 55.0% | |
| ! | GTTAAGGTTGGCCCCAATGG+TGG | + | Chr8:75975962-75975981 | MsG0880046635.01.T01:CDS | 55.0% |
| CAGCTACCAGCACCAGTGAC+AGG | + | Chr8:75975402-75975421 | MsG0880046635.01.T01:CDS | 60.0% | |
| TCAGGTCCTGTCACTGGTGC+TGG | - | Chr8:75975411-75975430 | None:intergenic | 60.0% | |
| TGGTCCTGAAGCGGCTAGTG+AGG | + | Chr8:75976868-75976887 | MsG0880046635.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 75975291 | 75976961 | 75975291 | ID=MsG0880046635.01;Name=MsG0880046635.01 |
| Chr8 | mRNA | 75975291 | 75976961 | 75975291 | ID=MsG0880046635.01.T01;Parent=MsG0880046635.01;Name=MsG0880046635.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|290 |
| Chr8 | exon | 75975291 | 75975550 | 75975291 | ID=MsG0880046635.01.T01:exon:32390;Parent=MsG0880046635.01.T01 |
| Chr8 | exon | 75975835 | 75976107 | 75975835 | ID=MsG0880046635.01.T01:exon:32391;Parent=MsG0880046635.01.T01 |
| Chr8 | exon | 75976622 | 75976961 | 75976622 | ID=MsG0880046635.01.T01:exon:32392;Parent=MsG0880046635.01.T01 |
| Chr8 | CDS | 75975291 | 75975550 | 75975291 | ID=MsG0880046635.01.T01:cds;Parent=MsG0880046635.01.T01 |
| Chr8 | CDS | 75975835 | 75976107 | 75975835 | ID=MsG0880046635.01.T01:cds;Parent=MsG0880046635.01.T01 |
| Chr8 | CDS | 75976622 | 75976961 | 75976622 | ID=MsG0880046635.01.T01:cds;Parent=MsG0880046635.01.T01 |
| Gene Sequence |
| Protein sequence |
