AlfalfaGEDB | MsG0880046716.01

M. sativa cultivar ZhongmuNo.1 / MsG0880046716.01

KEGG: K07936
GO: GO:0003924 GO:0005525 GO:0006913
PFAM: PF00071

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046716.01.T01	XP_024637534.1	95.089	224	10	1	8	230	21	244	7.94E-158	447

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046716.01.T01	P38548	85.455	220	32	0	11	230	2	221	1.18E-142	400

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046716.01.T01	G7JV88	91.403	221	8	2	11	230	2	212	2.44e-145	413

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0880046716.01	MsG0880046726.01	0.959273	2.925188e-117	1.152825e-111

PPI

Gene1	Gene2	Type
MsG0880046716.01	MsG0280006351.01	PPI
MsG0880046716.01	MsG0480023719.01	PPI
MsG0580026742.01	MsG0880046716.01	PPI
MsG0880046716.01	MsG0880042987.01	PPI
MsG0880046716.01	MsG0880046390.01	PPI
MsG0880046716.01	MsG0180004652.01	PPI
MsG0880046716.01	MsG0580024324.01	PPI
MsG0780041238.01	MsG0880046716.01	PPI
MsG0880046716.01	MsG0180006070.01	PPI
MsG0480023941.01	MsG0880046716.01	PPI
MsG0880046716.01	MsG0380016183.01	PPI
MsG0880046716.01	MsG0880046726.01	PPI
MsG0880046716.01	MsG0380016864.01	PPI
MsG0880046716.01	MsG0480021844.01	PPI
MsG0880046716.01	MsG0180003984.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046716.01.T01	MTR_4g113620	91.403	221	8	2	11	230	2	212	6.18e-149	413
MsG0880046716.01.T01	MTR_3g107707	85.000	220	33	0	11	230	2	221	2.06e-143	400
MsG0880046716.01.T01	MTR_3g107713	84.545	220	34	0	11	230	2	221	7.43e-143	398
MsG0880046716.01.T01	MTR_3g107717	84.545	220	34	0	11	230	2	221	9.25e-143	398
MsG0880046716.01.T01	MTR_4g098950	30.570	193	125	4	23	212	10	196	3.82e-28	106
MsG0880046716.01.T01	MTR_5g013900	33.929	168	108	3	23	187	10	177	1.51e-27	104
MsG0880046716.01.T01	MTR_8g103550	34.783	161	102	3	24	181	11	171	2.60e-27	103
MsG0880046716.01.T01	MTR_8g031680	31.395	172	115	3	23	191	7	178	3.71e-27	103
MsG0880046716.01.T01	MTR_1g097420	28.877	187	120	4	23	196	9	195	7.18e-27	102
MsG0880046716.01.T01	MTR_3g064390	33.750	160	103	3	24	180	12	171	2.08e-26	101
MsG0880046716.01.T01	MTR_4g088090	29.016	193	131	4	23	209	14	206	2.79e-26	101
MsG0880046716.01.T01	MTR_4g064897	32.597	181	114	3	23	200	13	188	5.24e-26	100
MsG0880046716.01.T01	MTR_8g092020	30.994	171	108	3	23	183	13	183	7.82e-26	100
MsG0880046716.01.T01	MTR_8g031870	31.677	161	107	3	23	180	7	167	1.03e-25	99.4
MsG0880046716.01.T01	MTR_3g087160	32.143	168	111	3	23	187	10	177	2.17e-25	99.0
MsG0880046716.01.T01	MTR_2g014990	29.016	193	131	4	23	209	14	206	2.33e-25	99.4
MsG0880046716.01.T01	MTR_4g079350	29.016	193	131	4	23	209	14	206	2.67e-25	99.0
MsG0880046716.01.T01	MTR_5g076590	33.125	160	104	3	24	180	12	171	5.20e-25	97.8
MsG0880046716.01.T01	MTR_3g069510	35.065	154	97	3	23	173	13	166	7.91e-25	97.8
MsG0880046716.01.T01	MTR_8g090215	32.143	168	111	3	23	187	10	177	9.95e-25	97.4
MsG0880046716.01.T01	MTR_1g068740	30.864	162	108	3	23	180	16	177	1.26e-24	97.4
MsG0880046716.01.T01	MTR_1g115325	30.864	162	108	3	23	180	16	177	1.41e-24	97.1
MsG0880046716.01.T01	MTR_6g079550	34.161	161	103	3	23	180	13	173	2.00e-24	96.7
MsG0880046716.01.T01	MTR_7g100020	30.864	162	108	3	23	180	16	177	2.63e-24	96.7
MsG0880046716.01.T01	MTR_8g089985	29.577	213	136	6	16	222	12	216	3.01e-24	96.7
MsG0880046716.01.T01	MTR_1g068730	30.247	162	109	3	23	180	16	177	3.84e-24	95.9
MsG0880046716.01.T01	MTR_2g083860	34.615	156	95	3	23	173	14	167	7.63e-24	95.5
MsG0880046716.01.T01	MTR_2g090865	32.903	155	101	2	23	174	12	166	7.85e-24	95.1
MsG0880046716.01.T01	MTR_1g029450	36.810	163	97	4	23	180	18	179	9.00e-24	95.1
MsG0880046716.01.T01	MTR_2g005510	35.065	154	97	2	23	173	16	169	9.04e-24	95.1
MsG0880046716.01.T01	MTR_6g021790	31.515	165	110	2	23	184	7	171	1.41e-23	94.4
MsG0880046716.01.T01	MTR_7g081700	31.515	165	110	2	23	184	9	173	1.52e-23	94.0
MsG0880046716.01.T01	MTR_2g075950	33.117	154	100	2	23	173	14	167	1.79e-23	94.4
MsG0880046716.01.T01	MTR_8g031660	31.056	161	108	2	23	180	7	167	3.58e-23	93.2
MsG0880046716.01.T01	MTR_8g006970	33.533	167	104	4	23	184	23	187	4.45e-23	93.2
MsG0880046716.01.T01	MTR_1g097420	26.214	206	137	5	4	196	19	222	5.04e-23	93.6
MsG0880046716.01.T01	MTR_2g102060	31.677	161	107	3	24	181	12	172	5.07e-23	92.8
MsG0880046716.01.T01	MTR_8g006970	33.742	163	101	4	23	180	9	169	5.53e-23	92.0
MsG0880046716.01.T01	MTR_4g012940	30.409	171	109	3	23	183	9	179	6.19e-23	92.8
MsG0880046716.01.T01	MTR_4g069850	30.120	166	106	3	23	178	9	174	7.55e-23	92.4
MsG0880046716.01.T01	MTR_2g101890	30.000	180	116	3	23	192	11	190	7.73e-23	92.4
MsG0880046716.01.T01	MTR_2g096550	30.061	163	109	2	23	180	16	178	7.83e-23	92.4
MsG0880046716.01.T01	MTR_3g086980	28.638	213	135	5	16	214	11	220	8.11e-23	92.8
MsG0880046716.01.T01	MTR_8g031830	32.237	152	100	3	23	171	7	158	9.82e-23	92.0
MsG0880046716.01.T01	MTR_8g036220	30.723	166	112	3	23	185	17	182	1.44e-22	92.0
MsG0880046716.01.T01	MTR_7g405790	28.916	166	115	3	23	185	16	181	3.74e-22	90.9
MsG0880046716.01.T01	MTR_8g107070	33.962	159	98	3	23	176	15	171	4.33e-22	91.7
MsG0880046716.01.T01	MTR_8g093740	33.918	171	106	5	15	180	7	175	5.92e-22	90.1
MsG0880046716.01.T01	MTR_4g063160	30.061	163	108	4	24	180	17	179	5.93e-22	90.1
MsG0880046716.01.T01	MTR_3g096350	33.742	163	102	4	23	180	13	174	1.33e-21	89.0
MsG0880046716.01.T01	MTR_7g103070	32.022	178	108	4	22	194	16	185	1.44e-21	89.4
MsG0880046716.01.T01	MTR_7g051940	28.313	166	116	3	23	185	14	179	3.33e-21	88.2
MsG0880046716.01.T01	MTR_8g027220	32.298	161	106	3	23	180	27	187	3.49e-21	88.6
MsG0880046716.01.T01	MTR_2g027660	30.435	161	109	2	23	180	7	167	4.42e-21	87.8
MsG0880046716.01.T01	MTR_1g062760	30.337	178	110	5	22	194	14	182	4.85e-21	87.8
MsG0880046716.01.T01	MTR_2g005500	29.697	165	113	2	23	184	10	174	5.16e-21	87.4
MsG0880046716.01.T01	MTR_3g064390	34.167	120	78	1	24	142	12	131	5.89e-21	86.3
MsG0880046716.01.T01	MTR_1g078200	30.435	161	109	3	23	180	15	175	8.54e-21	87.4
MsG0880046716.01.T01	MTR_0262s0050	32.484	157	103	3	23	176	16	172	9.80e-21	87.0
MsG0880046716.01.T01	MTR_1g094220	30.435	161	108	4	24	180	33	193	1.19e-20	86.3
MsG0880046716.01.T01	MTR_1g052475	31.098	164	109	3	16	176	10	172	1.44e-20	86.7
MsG0880046716.01.T01	MTR_6g039490	29.070	172	110	4	23	183	9	179	3.80e-20	85.9
MsG0880046716.01.T01	MTR_1g068730	33.621	116	76	1	24	138	17	132	2.92e-19	82.0
MsG0880046716.01.T01	MTR_1g094220	29.630	162	106	5	24	177	33	194	2.98e-19	82.8
MsG0880046716.01.T01	MTR_1g090717	29.508	183	114	6	19	194	11	185	4.83e-19	82.4
MsG0880046716.01.T01	MTR_1g094220	29.870	154	104	4	24	173	33	186	6.72e-19	82.0
MsG0880046716.01.T01	MTR_1g068740	33.621	116	76	1	24	138	17	132	7.41e-19	81.6
MsG0880046716.01.T01	MTR_7g117910	34.884	129	82	2	16	143	15	142	1.17e-18	81.3
MsG0880046716.01.T01	MTR_4g099470	30.657	137	92	2	51	184	13	149	1.39e-18	80.5
MsG0880046716.01.T01	MTR_3g096350	37.288	118	70	3	23	137	13	129	1.58e-18	79.7
MsG0880046716.01.T01	MTR_3g096350	35.659	129	76	4	23	145	13	140	1.79e-18	79.3
MsG0880046716.01.T01	MTR_1g094220	29.870	154	104	4	24	173	33	186	2.51e-18	80.9
MsG0880046716.01.T01	MTR_8g075240	29.752	121	83	2	23	142	7	126	2.20e-14	69.7
MsG0880046716.01.T01	MTR_6g087980	32.203	118	78	2	23	139	7	123	2.22e-14	69.7
MsG0880046716.01.T01	MTR_4g088055	26.829	164	105	4	24	173	8	170	3.78e-14	68.9
MsG0880046716.01.T01	MTR_5g022600	29.752	121	83	2	23	142	7	126	5.07e-14	68.6
MsG0880046716.01.T01	MTR_7g103070	33.846	130	73	4	70	194	8	129	1.54e-13	66.6
MsG0880046716.01.T01	MTR_2g090875	30.328	122	82	3	23	142	7	127	2.80e-13	66.6
MsG0880046716.01.T01	MTR_8g093740	34.483	116	71	3	70	180	27	142	1.10e-12	64.3
MsG0880046716.01.T01	MTR_5g092060	28.485	165	111	1	23	180	105	269	1.89e-12	65.5
MsG0880046716.01.T01	MTR_3g078260	29.825	114	78	2	24	136	10	122	3.03e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046716.01.T01	AT5G55190	84.545	220	34	0	11	230	2	221	1.00e-143	400
MsG0880046716.01.T01	AT5G20010	84.545	220	34	0	11	230	2	221	1.64e-142	397
MsG0880046716.01.T01	AT5G20020	85.000	220	33	0	11	230	2	221	1.07e-136	383
MsG0880046716.01.T01	AT5G55080	66.351	211	66	1	11	221	2	207	1.35e-100	291
MsG0880046716.01.T01	AT4G39890	36.585	164	100	3	23	182	10	173	4.12e-29	108
MsG0880046716.01.T01	AT2G44610	32.738	168	110	3	23	187	10	177	3.12e-27	103
MsG0880046716.01.T01	AT1G07410	32.086	187	119	3	23	206	13	194	8.68e-27	102
MsG0880046716.01.T01	AT5G39620	32.749	171	105	3	23	183	6	176	2.66e-26	101
MsG0880046716.01.T01	AT2G21880	31.361	169	106	3	19	177	6	174	5.28e-26	100
MsG0880046716.01.T01	AT4G18430	30.052	193	129	4	23	209	14	206	8.14e-26	100
MsG0880046716.01.T01	AT5G45130	33.750	160	103	3	24	180	12	171	1.33e-25	99.4
MsG0880046716.01.T01	AT5G59840	32.099	162	106	3	23	180	16	177	1.56e-25	99.8
MsG0880046716.01.T01	AT4G09720	28.723	188	116	4	23	192	9	196	2.34e-25	99.4
MsG0880046716.01.T01	AT3G53610	29.834	181	119	4	23	199	16	192	2.89e-25	99.0
MsG0880046716.01.T01	AT3G53610	29.834	181	119	4	23	199	16	192	2.89e-25	99.0
MsG0880046716.01.T01	AT3G53610	29.834	181	119	4	23	199	16	192	2.89e-25	99.0
MsG0880046716.01.T01	AT2G22290	32.515	163	107	3	23	182	10	172	3.22e-25	98.6
MsG0880046716.01.T01	AT4G09720	27.957	186	115	4	23	192	9	191	3.25e-25	98.6
MsG0880046716.01.T01	AT5G45750	35.897	156	93	3	23	173	14	167	3.56e-25	99.0
MsG0880046716.01.T01	AT5G10260	33.333	168	109	3	23	187	10	177	4.34e-25	98.2
MsG0880046716.01.T01	AT1G22740	30.409	171	109	4	23	183	9	179	4.93e-25	98.2
MsG0880046716.01.T01	AT5G60860	29.016	193	131	4	23	209	14	206	5.92e-25	98.2
MsG0880046716.01.T01	AT4G18800	33.149	181	109	4	23	198	14	187	7.44e-25	97.8
MsG0880046716.01.T01	AT3G15060	33.766	154	99	3	23	173	14	167	8.21e-25	97.8
MsG0880046716.01.T01	AT4G09720	27.411	197	113	4	23	192	9	202	1.36e-24	97.4
MsG0880046716.01.T01	AT1G09630	35.065	154	97	2	23	173	13	166	1.41e-24	97.4
MsG0880046716.01.T01	AT5G45130	32.911	158	103	3	26	180	22	179	2.87e-24	96.3
MsG0880046716.01.T01	AT4G39990	32.738	168	106	3	23	185	18	183	3.18e-24	96.7
MsG0880046716.01.T01	AT4G19640	33.750	160	103	3	24	180	12	171	3.50e-24	95.9
MsG0880046716.01.T01	AT3G46060	30.864	162	108	3	23	180	16	177	3.59e-24	96.3
MsG0880046716.01.T01	AT3G46060	30.864	162	108	3	23	180	16	177	3.59e-24	96.3
MsG0880046716.01.T01	AT3G46060	30.864	162	108	3	23	180	16	177	3.59e-24	96.3
MsG0880046716.01.T01	AT5G59150	34.416	154	98	2	23	173	13	166	6.40e-24	95.5
MsG0880046716.01.T01	AT5G65270	32.984	191	114	7	13	198	10	191	9.69e-24	95.1
MsG0880046716.01.T01	AT3G18820	31.928	166	103	3	23	178	9	174	1.36e-23	94.4
MsG0880046716.01.T01	AT1G18200	31.056	161	108	3	23	180	14	174	1.38e-23	95.1
MsG0880046716.01.T01	AT3G46830	35.065	154	97	2	23	173	13	166	1.42e-23	94.7
MsG0880046716.01.T01	AT3G46830	35.065	154	97	2	23	173	13	166	1.42e-23	94.7
MsG0880046716.01.T01	AT4G17530	30.909	165	111	2	23	184	9	173	1.84e-23	94.0
MsG0880046716.01.T01	AT1G02130	32.727	165	108	3	23	184	9	173	2.42e-23	93.6
MsG0880046716.01.T01	AT5G03530	32.022	178	107	5	22	194	13	181	2.89e-23	93.6
MsG0880046716.01.T01	AT5G03530	32.022	178	107	5	22	194	13	181	2.89e-23	93.6
MsG0880046716.01.T01	AT5G47200	30.909	165	111	2	23	184	9	173	3.05e-23	93.6
MsG0880046716.01.T01	AT1G06400	34.810	158	92	3	23	173	14	167	4.71e-23	93.2
MsG0880046716.01.T01	AT1G73640	31.677	161	107	3	23	180	14	174	8.28e-23	93.2
MsG0880046716.01.T01	AT1G28550	33.117	154	100	3	23	173	14	167	8.31e-23	92.8
MsG0880046716.01.T01	AT2G33870	33.766	154	99	3	23	173	14	167	8.49e-23	92.8
MsG0880046716.01.T01	AT5G47960	33.537	164	101	4	16	174	10	170	3.01e-22	91.3
MsG0880046716.01.T01	AT4G35860	30.303	165	112	2	23	184	7	171	3.41e-22	90.9
MsG0880046716.01.T01	AT1G16920	33.333	156	97	3	23	173	14	167	3.84e-22	90.9
MsG0880046716.01.T01	AT1G49300	30.864	162	102	3	23	174	9	170	4.24e-22	90.5
MsG0880046716.01.T01	AT1G49300	30.864	162	102	3	23	174	9	170	4.24e-22	90.5
MsG0880046716.01.T01	AT5G47520	31.677	161	107	3	23	180	15	175	4.58e-22	90.9
MsG0880046716.01.T01	AT1G52280	30.120	166	106	3	23	178	9	174	5.94e-22	90.1
MsG0880046716.01.T01	AT5G64990	29.609	179	115	3	23	194	8	182	7.17e-22	89.7
MsG0880046716.01.T01	AT3G12160	32.317	164	107	4	16	176	10	172	1.05e-21	89.7
MsG0880046716.01.T01	AT3G16100	30.000	180	116	3	23	192	9	188	1.34e-21	89.4
MsG0880046716.01.T01	AT1G05810	31.677	161	93	4	23	173	13	166	2.11e-21	89.0
MsG0880046716.01.T01	AT1G43890	33.520	179	105	6	23	196	14	183	2.39e-21	88.6
MsG0880046716.01.T01	AT1G43890	33.520	179	105	6	23	196	14	183	2.39e-21	88.6
MsG0880046716.01.T01	AT1G43890	33.520	179	105	6	23	196	14	183	2.39e-21	88.6
MsG0880046716.01.T01	AT1G01200	28.804	184	127	3	23	202	29	212	2.88e-21	89.0
MsG0880046716.01.T01	AT4G17160	29.193	161	111	2	23	180	7	167	3.21e-21	88.2
MsG0880046716.01.T01	AT3G07410	29.545	176	117	3	23	193	13	186	3.63e-21	88.2
MsG0880046716.01.T01	AT1G05810	31.677	161	93	4	23	173	59	212	5.91e-21	88.6
MsG0880046716.01.T01	AT4G17170	30.435	161	109	2	23	180	7	167	6.88e-21	87.4
MsG0880046716.01.T01	AT5G03520	29.444	180	119	4	23	198	16	191	8.55e-21	87.4
MsG0880046716.01.T01	AT2G43130	29.480	173	105	4	23	185	13	178	1.17e-20	87.0
MsG0880046716.01.T01	AT3G11730	29.775	178	118	3	23	193	9	186	1.69e-20	86.3
MsG0880046716.01.T01	AT4G19640	34.921	126	80	2	24	147	12	137	3.67e-20	84.0
MsG0880046716.01.T01	AT2G31680	28.902	173	106	4	23	185	13	178	4.28e-20	85.5
MsG0880046716.01.T01	AT3G54840	29.814	161	109	4	24	180	35	195	4.75e-20	85.1
MsG0880046716.01.T01	AT3G09900	28.889	180	120	4	23	198	16	191	5.06e-20	85.1
MsG0880046716.01.T01	AT4G19640	33.333	141	91	3	24	161	12	152	8.24e-20	84.0
MsG0880046716.01.T01	AT3G54840	29.375	160	109	4	25	180	2	161	9.60e-20	83.2
MsG0880046716.01.T01	AT5G64990	28.495	186	115	4	23	194	8	189	4.07e-19	82.8
MsG0880046716.01.T01	AT2G21880	30.201	149	94	3	39	177	1	149	7.91e-19	81.3
MsG0880046716.01.T01	AT2G21880	30.201	149	94	3	39	177	1	149	7.91e-19	81.3
MsG0880046716.01.T01	AT3G09910	30.939	181	115	5	22	197	13	188	1.11e-18	81.3
MsG0880046716.01.T01	AT3G09910	30.939	181	115	5	22	197	13	188	1.11e-18	81.3
MsG0880046716.01.T01	AT3G54840	29.870	154	104	4	24	173	35	188	1.13e-18	81.3
MsG0880046716.01.T01	AT3G09910	30.899	178	109	5	22	194	13	181	3.90e-18	80.1
MsG0880046716.01.T01	AT3G09910	30.899	178	109	5	22	194	13	181	3.90e-18	80.1
MsG0880046716.01.T01	AT3G09910	30.899	178	109	5	22	194	13	181	3.90e-18	80.1
MsG0880046716.01.T01	AT4G09720	28.205	156	99	4	50	192	2	157	5.06e-18	79.0
MsG0880046716.01.T01	AT4G09720	28.205	156	99	4	50	192	2	157	5.06e-18	79.0
MsG0880046716.01.T01	AT4G09720	28.205	156	99	4	50	192	2	157	5.06e-18	79.0
MsG0880046716.01.T01	AT2G21880	27.219	169	105	4	19	177	6	166	1.26e-17	78.6
MsG0880046716.01.T01	AT5G03520	30.075	133	85	4	70	198	53	181	6.66e-16	73.9
MsG0880046716.01.T01	AT4G35860	31.624	117	77	2	71	184	9	125	1.42e-15	72.0
MsG0880046716.01.T01	AT4G35950	30.579	121	82	2	23	142	7	126	1.96e-14	69.7
MsG0880046716.01.T01	AT2G17800	30.579	121	82	2	23	142	7	126	2.02e-14	69.7
MsG0880046716.01.T01	AT2G17800	30.579	121	82	2	23	142	7	126	2.02e-14	69.7
MsG0880046716.01.T01	AT3G51300	30.833	120	81	2	24	142	8	126	2.60e-14	69.3
MsG0880046716.01.T01	AT4G28950	28.834	163	103	4	23	173	7	168	6.22e-14	68.6
MsG0880046716.01.T01	AT5G59150	33.019	106	68	2	71	173	10	115	1.18e-13	67.0
MsG0880046716.01.T01	AT4G35020	28.926	121	84	2	23	142	7	126	1.31e-13	67.4
MsG0880046716.01.T01	AT4G35020	28.926	121	84	2	23	142	7	126	1.31e-13	67.4
MsG0880046716.01.T01	AT4G35020	28.926	121	84	2	23	142	7	126	1.31e-13	67.4
MsG0880046716.01.T01	AT1G75840	28.926	121	84	2	23	142	7	126	2.42e-13	66.6
MsG0880046716.01.T01	AT2G44690	26.667	165	106	4	23	173	19	182	6.07e-12	63.2

Find 46 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGCATTTGAGTAAACTTTA+AGG	0.158330	8:+77269007	MsG0880046716.01.T01:exon
CAATTACCCTGCAAGTTTCT+TGG	0.245682	8:-77268645	None:intergenic
TACCTTGCCAAGAAACTTGC+AGG	0.321892	8:+77268638	MsG0880046716.01.T01:CDS
ACTTTCAAGCTTGTCCTTGT+AGG	0.329790	8:+77267673	MsG0880046716.01.T01:CDS
TAGCATAAATGCAGCCTTGC+AGG	0.332223	8:-77269174	None:intergenic
TTTGTTAAAAGACATCTAAC+TGG	0.376672	8:+77267845	MsG0880046716.01.T01:CDS
GCTATATCAAAGGCGACTTC+CGG	0.381760	8:-77268808	None:intergenic
TAATATGAACCTTCACTTTG+TGG	0.385685	8:+77268765	MsG0880046716.01.T01:CDS
GATGCCTGCTCTTGCTCCTC+CGG	0.427720	8:+77268789	MsG0880046716.01.T01:CDS
TACAAGGACAAGCTTGAAAG+TGG	0.442467	8:-77267671	None:intergenic
TGCATTTATGCTATATGTAA+TGG	0.460264	8:+77269184	MsG0880046716.01.T01:three_prime_UTR
TTGTTTCCACACAGGACAAT+GGG	0.468993	8:-77268497	None:intergenic
CTTGTAGGCGATGGAGGAAC+TGG	0.470211	8:+77267688	MsG0880046716.01.T01:CDS
TCAGGAAGAGGCTGAAATGC+TGG	0.480587	8:-77268973	None:intergenic
TTTAATTGCTGGGACACTGC+TGG	0.481104	8:+77268058	MsG0880046716.01.T01:CDS
CAAAGCAAGTTATATTTCAC+AGG	0.493248	8:+77268549	MsG0880046716.01.T01:CDS
AATGCTTCATCATCGTCATC+AGG	0.493441	8:-77268991	None:intergenic
CGAATTATGTGCAGCACTCA+AGG	0.496143	8:+77268259	MsG0880046716.01.T01:intron
AAGCTTGTCCTTGTAGGCGA+TGG	0.503724	8:+77267679	MsG0880046716.01.T01:CDS
CAGTTCCTCCATCGCCTACA+AGG	0.504419	8:-77267687	None:intergenic
TTCTTGGCAAGGTATAAGAA+AGG	0.513350	8:-77268629	None:intergenic
AGGGAGAGCCTGTATAGAAA+CGG	0.516875	8:-77267626	None:intergenic
GGGAGAGCCTGTATAGAAAC+GGG	0.517611	8:-77267625	None:intergenic
ACCCTGCAAGTTTCTTGGCA+AGG	0.522554	8:-77268640	None:intergenic
ACTTCCGGAGGAGCAAGAGC+AGG	0.529548	8:-77268793	None:intergenic
CTTGTCCTTGTAGGCGATGG+AGG	0.530236	8:+77267682	MsG0880046716.01.T01:CDS
CTTGTTTCCACACAGGACAA+TGG	0.543166	8:-77268498	None:intergenic
TAGTTAACAATTTGCTGCTG+AGG	0.544537	8:-77267646	None:intergenic
TGCAATACAACAGCTACCAT+TGG	0.545890	8:+77267986	MsG0880046716.01.T01:intron
CATTGTCCTGTGTGGAAACA+AGG	0.562819	8:+77268499	MsG0880046716.01.T01:CDS
TCATCATCGTCATCAGGAAG+AGG	0.571509	8:-77268985	None:intergenic
AGTTAACAATTTGCTGCTGA+GGG	0.583105	8:-77267645	None:intergenic
AACAGCTACCATTGGTGTGG+AGG	0.584491	8:+77267994	MsG0880046716.01.T01:intron
CATCAACCTTGTTTCCACAC+AGG	0.607307	8:-77268505	None:intergenic
TTCTTGCGCAGCTATATCAA+AGG	0.620843	8:-77268818	None:intergenic
CAATTTGTATAAAAGTCTAG+TGG	0.622613	8:-77268022	None:intergenic
TACAACAGCTACCATTGGTG+TGG	0.624469	8:+77267991	MsG0880046716.01.T01:intron
GTGATATCTCTGTGCCATGT+TGG	0.627254	8:-77268337	None:intergenic
ATATCAAAGGCGACTTCCGG+AGG	0.631596	8:-77268805	None:intergenic
TGGATGAACCTCCACACCAA+TGG	0.632515	8:-77268002	None:intergenic
CATGGCACAGAGATATCACT+CGG	0.637693	8:+77268341	MsG0880046716.01.T01:CDS
CAGGCATCTCCACAAAGTGA+AGG	0.643544	8:-77268774	None:intergenic
ACAAGGACAAGCTTGAAAGT+GGG	0.656622	8:-77267670	None:intergenic
ACCTTGCCAAGAAACTTGCA+GGG	0.657492	8:+77268639	MsG0880046716.01.T01:CDS
CATACAGAAATGTTCCAACA+TGG	0.666208	8:+77268323	MsG0880046716.01.T01:CDS
AATATACCCATTGTCCTGTG+TGG	0.680204	8:+77268491	MsG0880046716.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTAATATATATTGTTTAAGT+TGG	+	Chr8:77267891-77267910	MsG0880046716.01.T01:intron	15.0%
!!!	ATGATATTGTTATTTGTTTA+TGG	+	Chr8:77267805-77267824	MsG0880046716.01.T01:intron	15.0%
!!!	TAGACAAAAGTTATTTTTAT+TGG	+	Chr8:77269144-77269163	MsG0880046716.01.T01:three_prime_UTR	15.0%
!!!	TATTGATTTATATTCTTTAC+AGG	+	Chr8:77268929-77268948	MsG0880046716.01.T01:intron	15.0%
!!!	TGATATTGTTATTTGTTTAT+GGG	+	Chr8:77267806-77267825	MsG0880046716.01.T01:intron	15.0%
!!	AAATCAGTAACAAACTAATT+AGG	-	Chr8:77268900-77268919	None:intergenic	20.0%
!!	AATCAGTAACAAACTAATTA+GGG	-	Chr8:77268899-77268918	None:intergenic	20.0%
!!	ATTAAGAACTAAATTGGTAA+GGG	-	Chr8:77268168-77268187	None:intergenic	20.0%
!!	GATATGATTAAGAACTAAAT+TGG	-	Chr8:77268174-77268193	None:intergenic	20.0%
!!!	AAAAATTCGTTTTAATTGCT+GGG	+	Chr8:77268048-77268067	MsG0880046716.01.T01:CDS	20.0%
!!!	AATTTTGAAGCATAATTAAG+TGG	-	Chr8:77267747-77267766	None:intergenic	20.0%
!	AAGCATTTGAGTAAACTTTA+AGG	+	Chr8:77269007-77269026	MsG0880046716.01.T01:exon	25.0%
!	CAATTTGTATAAAAGTCTAG+TGG	-	Chr8:77268025-77268044	None:intergenic	25.0%
!	GATTAAGAACTAAATTGGTA+AGG	-	Chr8:77268169-77268188	None:intergenic	25.0%
!	GTAGCAAATTATTTACTGAT+TGG	+	Chr8:77268721-77268740	MsG0880046716.01.T01:intron	25.0%
!	TGCATTTATGCTATATGTAA+TGG	+	Chr8:77269184-77269203	MsG0880046716.01.T01:three_prime_UTR	25.0%
!	TTTGTTAAAAGACATCTAAC+TGG	+	Chr8:77267845-77267864	MsG0880046716.01.T01:CDS	25.0%
!!	ATTTTCATCACAAAGAGATT+TGG	+	Chr8:77269071-77269090	MsG0880046716.01.T01:three_prime_UTR	25.0%
!!	CTAGACTTTTATACAAATTG+TGG	+	Chr8:77268025-77268044	MsG0880046716.01.T01:CDS	25.0%
!!	TAGATGTCTTTTAACAAAAG+TGG	-	Chr8:77267843-77267862	None:intergenic	25.0%
!!	TCAACTAGAGTATTTCTTAA+TGG	+	Chr8:77268214-77268233	MsG0880046716.01.T01:intron	25.0%
!!!	AATTTTAGCTAGTGTAGTTA+AGG	+	Chr8:77269114-77269133	MsG0880046716.01.T01:three_prime_UTR	25.0%
!!!	ATTTTAGCTAGTGTAGTTAA+GGG	+	Chr8:77269115-77269134	MsG0880046716.01.T01:three_prime_UTR	25.0%
!!!	GAAAAATTCGTTTTAATTGC+TGG	+	Chr8:77268047-77268066	MsG0880046716.01.T01:CDS	25.0%
	AAAGTGAAGGTTCATATTAC+TGG	-	Chr8:77268764-77268783	None:intergenic	30.0%
	AGCATAATTAAGTGGAACTT+TGG	-	Chr8:77267739-77267758	None:intergenic	30.0%
	AGGTTCATATTACTGGAAAT+TGG	-	Chr8:77268757-77268776	None:intergenic	30.0%
	CAAAGCAAGTTATATTTCAC+AGG	+	Chr8:77268549-77268568	MsG0880046716.01.T01:CDS	30.0%
	TAATATGAACCTTCACTTTG+TGG	+	Chr8:77268765-77268784	MsG0880046716.01.T01:CDS	30.0%
	TCTTAGCTGAGTGATAATTT+GGG	+	Chr8:77268431-77268450	MsG0880046716.01.T01:intron	30.0%
	TGTGGAATCAATACGTAAAT+TGG	-	Chr8:77267917-77267936	None:intergenic	30.0%
	TTAGACATGCATATATAGTG+TGG	-	Chr8:77267935-77267954	None:intergenic	30.0%
	TTCTTAGCTGAGTGATAATT+TGG	+	Chr8:77268430-77268449	MsG0880046716.01.T01:intron	30.0%
!	ATAATTCGTAGGTTTTCATC+AGG	-	Chr8:77268247-77268266	None:intergenic	30.0%
!!	CTGTGTTTTTATCTGCATTT+AGG	+	Chr8:77268860-77268879	MsG0880046716.01.T01:intron	30.0%
!!!	TTATTGGTTTTATTCCTGCA+AGG	+	Chr8:77269160-77269179	MsG0880046716.01.T01:three_prime_UTR	30.0%
	CATACAGAAATGTTCCAACA+TGG	+	Chr8:77268323-77268342	MsG0880046716.01.T01:CDS	35.0%
	TTCTTGGCAAGGTATAAGAA+AGG	-	Chr8:77268632-77268651	None:intergenic	35.0%
!	CTAAATTGGTAAGGGAGTTT+TGG	-	Chr8:77268160-77268179	None:intergenic	35.0%
!	TGAGACCACCAAATTTTTCT+TGG	-	Chr8:77268084-77268103	None:intergenic	35.0%
!	TGTTATTTGTTTATGGGTGC+AGG	+	Chr8:77267812-77267831	MsG0880046716.01.T01:intron	35.0%
!!	AGTTAACAATTTGCTGCTGA+GGG	-	Chr8:77267648-77267667	None:intergenic	35.0%
!!	TAGTTAACAATTTGCTGCTG+AGG	-	Chr8:77267649-77267668	None:intergenic	35.0%
	AATATACCCATTGTCCTGTG+TGG	+	Chr8:77268491-77268510	MsG0880046716.01.T01:CDS	40.0%
	AATGCTTCATCATCGTCATC+AGG	-	Chr8:77268994-77269013	None:intergenic	40.0%
	ACAAGGACAAGCTTGAAAGT+GGG	-	Chr8:77267673-77267692	None:intergenic	40.0%
	ACTGCTGGCCAAGAAAAATT+TGG	+	Chr8:77268073-77268092	MsG0880046716.01.T01:CDS	40.0%
	ACTTTCAAGCTTGTCCTTGT+AGG	+	Chr8:77267673-77267692	MsG0880046716.01.T01:CDS	40.0%
	CAATTACCCTGCAAGTTTCT+TGG	-	Chr8:77268648-77268667	None:intergenic	40.0%
	CCAGTGTCATGATTGATGAA+TGG	+	Chr8:77268699-77268718	MsG0880046716.01.T01:intron	40.0%
	CCATTCATCAATCATGACAC+TGG	-	Chr8:77268702-77268721	None:intergenic	40.0%
	TACAAGGACAAGCTTGAAAG+TGG	-	Chr8:77267674-77267693	None:intergenic	40.0%
	TGCAATACAACAGCTACCAT+TGG	+	Chr8:77267986-77268005	MsG0880046716.01.T01:intron	40.0%
	TTCTTGCGCAGCTATATCAA+AGG	-	Chr8:77268821-77268840	None:intergenic	40.0%
	TTGTTTCCACACAGGACAAT+GGG	-	Chr8:77268500-77268519	None:intergenic	40.0%
!	GTTTTGTCCCGTTTCTATAC+AGG	+	Chr8:77267618-77267637	MsG0880046716.01.T01:CDS	40.0%
	ACCTTGCCAAGAAACTTGCA+GGG	+	Chr8:77268639-77268658	MsG0880046716.01.T01:CDS	45.0%
	AGGGAGAGCCTGTATAGAAA+CGG	-	Chr8:77267629-77267648	None:intergenic	45.0%
	ATAGCTGCGCAAGAATCGTA+AGG	+	Chr8:77268826-77268845	MsG0880046716.01.T01:intron	45.0%
	CATGGCACAGAGATATCACT+CGG	+	Chr8:77268341-77268360	MsG0880046716.01.T01:CDS	45.0%
	CATTGTCCTGTGTGGAAACA+AGG	+	Chr8:77268499-77268518	MsG0880046716.01.T01:CDS	45.0%
	CGAATTATGTGCAGCACTCA+AGG	+	Chr8:77268259-77268278	MsG0880046716.01.T01:intron	45.0%
	CTTGTTTCCACACAGGACAA+TGG	-	Chr8:77268501-77268520	None:intergenic	45.0%
	GCTATATCAAAGGCGACTTC+CGG	-	Chr8:77268811-77268830	None:intergenic	45.0%
	GCTGGCCAAGAAAAATTTGG+TGG	+	Chr8:77268076-77268095	MsG0880046716.01.T01:CDS	45.0%
	GTGATATCTCTGTGCCATGT+TGG	-	Chr8:77268340-77268359	None:intergenic	45.0%
	TACAACAGCTACCATTGGTG+TGG	+	Chr8:77267991-77268010	MsG0880046716.01.T01:intron	45.0%
	TACCTTGCCAAGAAACTTGC+AGG	+	Chr8:77268638-77268657	MsG0880046716.01.T01:CDS	45.0%
	TAGCATAAATGCAGCCTTGC+AGG	-	Chr8:77269177-77269196	None:intergenic	45.0%
	TCATCATCGTCATCAGGAAG+AGG	-	Chr8:77268988-77269007	None:intergenic	45.0%
	TTTAATTGCTGGGACACTGC+TGG	+	Chr8:77268058-77268077	MsG0880046716.01.T01:CDS	45.0%
!	CATCAACCTTGTTTCCACAC+AGG	-	Chr8:77268508-77268527	None:intergenic	45.0%
!	GAGTGCTGCACATAATTCGT+AGG	-	Chr8:77268258-77268277	None:intergenic	45.0%
	AACAGCTACCATTGGTGTGG+AGG	+	Chr8:77267994-77268013	MsG0880046716.01.T01:intron	50.0%
	AAGCTTGTCCTTGTAGGCGA+TGG	+	Chr8:77267679-77267698	MsG0880046716.01.T01:CDS	50.0%
	ACCCTGCAAGTTTCTTGGCA+AGG	-	Chr8:77268643-77268662	None:intergenic	50.0%
	ATATCAAAGGCGACTTCCGG+AGG	-	Chr8:77268808-77268827	None:intergenic	50.0%
	CAGGCATCTCCACAAAGTGA+AGG	-	Chr8:77268777-77268796	None:intergenic	50.0%
	GGGAGAGCCTGTATAGAAAC+GGG	-	Chr8:77267628-77267647	None:intergenic	50.0%
	TCAGGAAGAGGCTGAAATGC+TGG	-	Chr8:77268976-77268995	None:intergenic	50.0%
	TGGATGAACCTCCACACCAA+TGG	-	Chr8:77268005-77268024	None:intergenic	50.0%
	CAGTTCCTCCATCGCCTACA+AGG	-	Chr8:77267690-77267709	None:intergenic	55.0%
	CTTGTAGGCGATGGAGGAAC+TGG	+	Chr8:77267688-77267707	MsG0880046716.01.T01:CDS	55.0%
	CTTGTCCTTGTAGGCGATGG+AGG	+	Chr8:77267682-77267701	MsG0880046716.01.T01:CDS	55.0%
	ACTTCCGGAGGAGCAAGAGC+AGG	-	Chr8:77268796-77268815	None:intergenic	60.0%
	GATGCCTGCTCTTGCTCCTC+CGG	+	Chr8:77268789-77268808	MsG0880046716.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	77267610	77269214	77267610	ID=MsG0880046716.01;Name=MsG0880046716.01
Chr8	mRNA	77267610	77269214	77267610	ID=MsG0880046716.01.T01;Parent=MsG0880046716.01;Name=MsG0880046716.01.T01;_AED=0.27;_eAED=0.29;_QI=0\|0.66\|0.28\|1\|1\|1\|7\|194\|230
Chr8	exon	77267610	77267709	77267610	ID=MsG0880046716.01.T01:exon:32692;Parent=MsG0880046716.01.T01
Chr8	exon	77267834	77267890	77267834	ID=MsG0880046716.01.T01:exon:32693;Parent=MsG0880046716.01.T01
Chr8	exon	77267999	77268116	77267999	ID=MsG0880046716.01.T01:exon:32694;Parent=MsG0880046716.01.T01
Chr8	exon	77268273	77268362	77268273	ID=MsG0880046716.01.T01:exon:32695;Parent=MsG0880046716.01.T01
Chr8	exon	77268481	77268660	77268481	ID=MsG0880046716.01.T01:exon:32696;Parent=MsG0880046716.01.T01
Chr8	exon	77268765	77268842	77268765	ID=MsG0880046716.01.T01:exon:32697;Parent=MsG0880046716.01.T01
Chr8	exon	77268951	77269214	77268951	ID=MsG0880046716.01.T01:exon:32698;Parent=MsG0880046716.01.T01
Chr8	CDS	77267610	77267709	77267610	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77267834	77267890	77267834	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77267999	77268116	77267999	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77268273	77268362	77268273	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77268481	77268660	77268481	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77268765	77268842	77268765	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	CDS	77268951	77269020	77268951	ID=MsG0880046716.01.T01:cds;Parent=MsG0880046716.01.T01
Chr8	three_prime_UTR	77269021	77269214	77269021	ID=MsG0880046716.01.T01:three_prime_utr;Parent=MsG0880046716.01.T01

Gene Sequence

>MsG0880046716.01.T01

ATGCTTTTGTTTTGTCCCGTTTCTATACAGGCTCTCCCTCAGCAGCAAATTGTTAACTATCCCACTTTCAAGCTTGTCCTTGTAGGCGATGGAGGAACTGGAAAAACCACTTTTGTTAAAAGACATCTAACTGGCGAATTTGAGAAGAGATATGAACCTACCATTGGTGTGGAGGTTCATCCACTAGACTTTTATACAAATTGTGGAAAAATTCGTTTTAATTGCTGGGACACTGCTGGCCAAGAAAAATTTGGTGGTCTCAGAGATGCTTATTACACTCAAGGACAATGTGCTATTATTATGTTCGATGTAACTGCTCGTTTGACATACAGAAATGTTCCAACATGGCACAGAGATATCACTCGTGTGTGTGAGAATATACCCATTGTCCTGTGTGGAAACAAGGTTGATGTGAAGAATAGACAGATTAAAGCAAAGCAAGTTATATTTCACAGGAAGAAGAATCTACAATACTATGAAATATCTGCAAAGAGTAACTATAATTTTGAGAAACCTTTCTTATACCTTGCCAAGAAACTTGCAGGTAATATGAACCTTCACTTTGTGGAGATGCCTGCTCTTGCTCCTCCGGAAGTCGCCTTTGATATAGCTGCGCAAGAATCGATTGAACATGAGATATGTATGCCAGCATTTCAGCCTCTTCCTGATGACGATGATGAAGCATTTGAGTAA

Protein sequence

>MsG0880046716.01.T01

MLLFCPVSIQALPQQQIVNYPTFKLVLVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFYTNCGKIRFNCWDTAGQEKFGGLRDAYYTQGQCAIIMFDVTARLTYRNVPTWHRDITRVCENIPIVLCGNKVDVKNRQIKAKQVIFHRKKNLQYYEISAKSNYNFEKPFLYLAKKLAGNMNLHFVEMPALAPPEVAFDIAAQESIEHEICMPAFQPLPDDDDEAFE*