AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041238.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041238.01.T01 MTR_7g107400 92.607 257 10 1 1 248 1 257 2.34e-164 457
MsG0780041238.01.T01 MTR_3g095810 89.754 244 15 2 5 239 9 251 3.21e-148 416
MsG0780041238.01.T01 MTR_3g095810 89.754 244 15 2 5 239 9 251 4.30e-148 416
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041238.01.T01 AT3G04770 74.419 258 44 6 3 247 9 257 7.96e-132 374
MsG0780041238.01.T01 AT1G72370 73.705 251 44 4 2 231 7 256 1.26e-130 371
MsG0780041238.01.T01 AT1G72370 73.705 251 44 4 2 231 7 256 1.66e-130 371
MsG0780041238.01.T01 AT3G04770 89.840 187 19 0 2 188 8 194 1.40e-126 362

Find 87 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAGTGAGGTTGAGATTA+GGG 0.200518 7:-88624316 None:intergenic
AGGGATTTATATTATAAATC+TGG 0.244718 7:+88624576 MsG0780041238.01.T01:intron
ATCCAGATTTATGGATGTTT+TGG 0.251034 7:+88629344 MsG0780041238.01.T01:three_prime_UTR
CTCAAATTTGCTCAGTATAC+TGG 0.267475 7:+88624706 MsG0780041238.01.T01:CDS
ATCGATCAAGTACCAGCTTC+TGG 0.268097 7:-88626196 None:intergenic
CCAAGAGCAGCTTCCTTGAT+TGG 0.286416 7:-88625664 None:intergenic
GTTCAATCTGCTAGACCTTA+TGG 0.290724 7:+88624670 MsG0780041238.01.T01:CDS
TGCTTGCCCTTGTTGTTGGC+AGG 0.316997 7:-88625751 None:intergenic
CCAGCAGTTCTGCTGTCAAC+TGG 0.356678 7:+88626168 MsG0780041238.01.T01:CDS
AACCAAAACATCCATAAATC+TGG 0.357955 7:-88629346 None:intergenic
TCTTGCTCCTTTGCCTCCTC+AGG 0.364214 7:-88626021 None:intergenic
ACTGTGCTTGCCCTTGTTGT+TGG 0.371019 7:-88625755 None:intergenic
ACAGTATAGGATGTCTGTTT+TGG 0.375538 7:+88625773 MsG0780041238.01.T01:CDS
GAACTGCATCATTCCATGTT+TGG 0.376849 7:-88626134 None:intergenic
AGCAGAGTGAGGTTGAGATT+AGG 0.378530 7:-88624317 None:intergenic
GAAACCTGATGATCAGTTCT+TGG 0.383788 7:-88624823 None:intergenic
GTTGAGATTAGGGTTATGTA+TGG 0.392297 7:-88624306 None:intergenic
ATGGAGCAACTTCAACAGTT+AGG 0.396196 7:-88624287 None:intergenic
GGGATTTATATTATAAATCT+GGG 0.401340 7:+88624577 MsG0780041238.01.T01:intron
CATCGGCGGCAAGCATCATC+TGG 0.408335 7:-88624393 None:intergenic
AGCAGGCCATTGTCCATCAT+TGG 0.409891 7:-88626103 None:intergenic
ATCAGTGAGGATAAGAAGCC+TGG 0.410991 7:-88624800 None:intergenic
GCAGGCCATTGTCCATCATT+GGG 0.413746 7:-88626102 None:intergenic
ACTGGTGCCAATGCTATTGC+TGG 0.415426 7:+88624724 MsG0780041238.01.T01:CDS
CCAATCAAGGAAGCTGCTCT+TGG 0.415479 7:+88625664 MsG0780041238.01.T01:CDS
TTACCATGACATCCCACTTA+AGG 0.419417 7:-88625842 None:intergenic
TCGAATTTGCAGAGGAATGA+AGG 0.421307 7:+88629261 MsG0780041238.01.T01:three_prime_UTR
ACGAGGGGCGGCCATGGTGG+CGG 0.425429 7:-88624344 None:intergenic
GAATGAAACTTGCATCTGAT+TGG 0.451068 7:-88624770 None:intergenic
TCGATCAAGTACCAGCTTCT+GGG 0.456752 7:-88626195 None:intergenic
GACAGCAGAACTGCTGGAAT+AGG 0.466911 7:-88626162 None:intergenic
TGATCCAAGAACTGATCATC+AGG 0.468742 7:+88624819 MsG0780041238.01.T01:CDS
AAGTCAGTAATAGCATAATC+TGG 0.469421 7:-88626063 None:intergenic
ACCATTCGCCTGGCCTTAAG+TGG 0.472381 7:+88625829 MsG0780041238.01.T01:CDS
GCTATTACTGACTTTAATGC+AGG 0.477186 7:+88626072 MsG0780041238.01.T01:CDS
GTATCACAGAAAGCAATTGT+TGG 0.479071 7:-88625694 None:intergenic
GAGTTGACGAGGGGCGGCCA+TGG 0.483920 7:-88624350 None:intergenic
CCAGTTGACAGCAGAACTGC+TGG 0.486840 7:-88626168 None:intergenic
ATTGAACAATCATATCTTGT+GGG 0.493138 7:-88624654 None:intergenic
TGGAGCAACTTCAACAGTTA+GGG 0.498418 7:-88624286 None:intergenic
CATGTTTGGTCGATAGCAGC+AGG 0.511174 7:-88626120 None:intergenic
TGTTTGTGTGCAGCCAATCA+AGG 0.514122 7:+88625651 MsG0780041238.01.T01:intron
AGAACAGCTCTCTGTCCATA+AGG 0.514765 7:-88624685 None:intergenic
GCTTGCCCTTGTTGTTGGCA+GGG 0.514834 7:-88625750 None:intergenic
GCAGGTTCTATCCCCAATGA+TGG 0.524423 7:+88626090 MsG0780041238.01.T01:CDS
ATCTTCAAGCGCCGTAACGA+TGG 0.529765 7:+88624460 MsG0780041238.01.T01:CDS
CAGCAGTTCTGCTGTCAACT+GGG 0.531767 7:+88626169 MsG0780041238.01.T01:CDS
GATGCGTGGAACCATTCGCC+TGG 0.531915 7:+88625819 MsG0780041238.01.T01:CDS
AGAACTGCTGGAATAGGCTC+TGG 0.537075 7:-88626156 None:intergenic
TAGAGAACCTGAGGAGGCAA+AGG 0.541067 7:+88626014 MsG0780041238.01.T01:intron
ATGGAATGTTACCATCGTTA+CGG 0.545997 7:-88624471 None:intergenic
GTAATAGCATAATCTGGTGC+AGG 0.546158 7:-88626057 None:intergenic
AACAAGGGCAAGCACAGTAT+AGG 0.547955 7:+88625760 MsG0780041238.01.T01:CDS
TTGACGAGGGGCGGCCATGG+TGG 0.548180 7:-88624347 None:intergenic
CAACTGGGCAGCCCAGAAGC+TGG 0.552277 7:+88626184 MsG0780041238.01.T01:CDS
CTGCTGCTATCGACCAAACA+TGG 0.557904 7:+88626121 MsG0780041238.01.T01:CDS
GATTGAACAATCATATCTTG+TGG 0.558514 7:-88624655 None:intergenic
CCCACTTAAGGCCAGGCGAA+TGG 0.560571 7:-88625830 None:intergenic
TTTAGTACCGAGATGGACAT+CGG 0.561895 7:-88624410 None:intergenic
ATGACATCCCACTTAAGGCC+AGG 0.567244 7:-88625837 None:intergenic
CTGAGAGAGTTGACGAGGGG+CGG 0.567420 7:-88624356 None:intergenic
ATCTGATTGGTAAAAGTACC+AGG 0.569249 7:-88624757 None:intergenic
ATTGCTGGAAGGCACACGCC+TGG 0.569818 7:+88624739 MsG0780041238.01.T01:CDS
CCTATGCGATATGTCGACAT+TGG 0.570541 7:+88625724 MsG0780041238.01.T01:CDS
CTCTGCTACTTCCGCCACCA+TGG 0.571384 7:+88624333 MsG0780041238.01.T01:exon
TTCGAAATTCGAATTTGCAG+AGG 0.576893 7:+88629253 MsG0780041238.01.T01:three_prime_UTR
AAGTTTCATTCAGTGAGCCC+AGG 0.582162 7:+88624782 MsG0780041238.01.T01:CDS
GTGCCTTCCAGCAATAGCAT+TGG 0.585941 7:-88624731 None:intergenic
TGAGGAGGCAAAGGAGCAAG+AGG 0.586597 7:+88626023 MsG0780041238.01.T01:CDS
TGGAATCCCTGCCAACAACA+AGG 0.586772 7:+88625744 MsG0780041238.01.T01:CDS
CTTGCCGCCGATGTCCATCT+CGG 0.588724 7:+88624403 MsG0780041238.01.T01:CDS
CTTTCTGAGAGAGTTGACGA+GGG 0.590646 7:-88624360 None:intergenic
AGGATGGGGTTGCAGATGCG+TGG 0.594395 7:+88625805 MsG0780041238.01.T01:CDS
TCAGTGAGGATAAGAAGCCT+GGG 0.611983 7:-88624799 None:intergenic
GGAATCCCTGCCAACAACAA+GGG 0.619315 7:+88625745 MsG0780041238.01.T01:CDS
TCTTTCTGAGAGAGTTGACG+AGG 0.626351 7:-88624361 None:intergenic
GTGCCAATGCTATTGCTGGA+AGG 0.638251 7:+88624728 MsG0780041238.01.T01:CDS
TGTTCTTTATAGAGAACCTG+AGG 0.649169 7:+88626005 MsG0780041238.01.T01:intron
CCATTCGCCTGGCCTTAAGT+GGG 0.650130 7:+88625830 MsG0780041238.01.T01:CDS
TTTCTGAGAGAGTTGACGAG+GGG 0.657247 7:-88624359 None:intergenic
TCTTTATAGAGAACCTGAGG+AGG 0.657660 7:+88626008 MsG0780041238.01.T01:intron
CTATCCCCAATGATGGACAA+TGG 0.660054 7:+88626097 MsG0780041238.01.T01:CDS
CAGGCCATTGTCCATCATTG+GGG 0.668561 7:-88626101 None:intergenic
CCAATGTCGACATATCGCAT+AGG 0.669426 7:-88625724 None:intergenic
GTGGCGGAAGTAGCAGAGTG+AGG 0.695124 7:-88624328 None:intergenic
GATCAGTTCTTGGATCAGTG+AGG 0.719669 7:-88624813 None:intergenic
AGTACCGAGATGGACATCGG+CGG 0.738432 7:-88624407 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTATTAAATAATAAT+TGG + Chr7:88627487-88627506 MsG0780041238.01.T01:intron 0.0%
!! ATATTGTATTATAAGAAATT+TGG + Chr7:88625610-88625629 MsG0780041238.01.T01:intron 10.0%
!! ATGAAAATATGAATTTATTT+AGG - Chr7:88628434-88628453 None:intergenic 10.0%
!! TAAAACATTAATAAAATCTA+TGG - Chr7:88628578-88628597 None:intergenic 10.0%
!! TGAAAATATGAATTTATTTA+GGG - Chr7:88628433-88628452 None:intergenic 10.0%
!!! ATAACAAAAATATTAGTTTT+GGG + Chr7:88627979-88627998 MsG0780041238.01.T01:intron 10.0%
!!! GAAAAACATATATTTTTTTT+AGG - Chr7:88627933-88627952 None:intergenic 10.0%
!!! TATAACAAAAATATTAGTTT+TGG + Chr7:88627978-88627997 MsG0780041238.01.T01:intron 10.0%
!! AAGAAAAATAGTTTAATCAA+AGG - Chr7:88628027-88628046 None:intergenic 15.0%
!! ATATTATTAAAACAGCTTAT+AGG - Chr7:88625440-88625459 None:intergenic 15.0%
!! TGCATTTGTTTATTTATTTA+GGG + Chr7:88624557-88624576 MsG0780041238.01.T01:intron 15.0%
!!! AAGTTTTTTTATTTTAGCTT+TGG + Chr7:88624984-88625003 MsG0780041238.01.T01:intron 15.0%
!!! ACTATTTTTTTCTTTTGTAA+CGG + Chr7:88625865-88625884 MsG0780041238.01.T01:intron 15.0%
!!! ATAGTAGAAATAATTTTTGA+AGG - Chr7:88627184-88627203 None:intergenic 15.0%
!!! ATTAATTTTTGACTACATTT+TGG - Chr7:88624525-88624544 None:intergenic 15.0%
!!! CTTGATTTTATATTCTATTA+TGG - Chr7:88625106-88625125 None:intergenic 15.0%
!!! GATCATTTTATATGTTAAAA+TGG + Chr7:88628170-88628189 MsG0780041238.01.T01:intron 15.0%
!!! GTATTTGTTAAAATATTTGA+AGG + Chr7:88628273-88628292 MsG0780041238.01.T01:intron 15.0%
!!! TAGGTTTTTTTTCAATTTTA+GGG - Chr7:88629193-88629212 None:intergenic 15.0%
!!! TGTTTTAATAATATATTGTG+TGG + Chr7:88625446-88625465 MsG0780041238.01.T01:intron 15.0%
!!! TTAGGTTTTTTTTCAATTTT+AGG - Chr7:88629194-88629213 None:intergenic 15.0%
!!! TTGTTTTTTTATGTTATTGT+GGG + Chr7:88625154-88625173 MsG0780041238.01.T01:intron 15.0%
!!! TTTTATTAAATAAAAACCGT+TGG + Chr7:88628615-88628634 MsG0780041238.01.T01:intron 15.0%
!! AAAAAAGAAATCCAGATTTA+TGG + Chr7:88629335-88629354 MsG0780041238.01.T01:three_prime_UTR 20.0%
!! AAAGCAAACAAAAATTAGTT+TGG - Chr7:88628677-88628696 None:intergenic 20.0%
!! AAATTTGATTGTTATGATTC+TGG - Chr7:88629096-88629115 None:intergenic 20.0%
!! AACATTAATAAAATCTATGG+TGG - Chr7:88628575-88628594 None:intergenic 20.0%
!! AAGTTAACGAAATAAAATGT+TGG - Chr7:88626377-88626396 None:intergenic 20.0%
!! AATTTGATTGTTATGATTCT+GGG - Chr7:88629095-88629114 None:intergenic 20.0%
!! ACTAATATGTTATCCAAAAT+TGG - Chr7:88625011-88625030 None:intergenic 20.0%
!! AGGGATTTATATTATAAATC+TGG + Chr7:88624576-88624595 MsG0780041238.01.T01:intron 20.0%
!! AGTTAACGAAATAAAATGTT+GGG - Chr7:88626376-88626395 None:intergenic 20.0%
!! ATGAAATTAAGAATAAGATG+AGG - Chr7:88628710-88628729 None:intergenic 20.0%
!! ATTAAGATGTTTATCCAAAA+AGG - Chr7:88625334-88625353 None:intergenic 20.0%
!! ATTGGTGAATAAATTGAAAT+TGG - Chr7:88629226-88629245 None:intergenic 20.0%
!! CATGTATATATATGAATATG+CGG - Chr7:88625057-88625076 None:intergenic 20.0%
!! CTAATATGTTATCCAAAATT+GGG - Chr7:88625010-88625029 None:intergenic 20.0%
!! GAAGGTAAATATAAATTGAA+GGG - Chr7:88626625-88626644 None:intergenic 20.0%
!! GGGATTTATATTATAAATCT+GGG + Chr7:88624577-88624596 MsG0780041238.01.T01:intron 20.0%
!! GTAATAATAAGTGCTTATAT+AGG - Chr7:88625388-88625407 None:intergenic 20.0%
!! GTGCATTTGTTTATTTATTT+AGG + Chr7:88624556-88624575 MsG0780041238.01.T01:intron 20.0%
!! TAAGTAATAGTATACAAGTA+AGG + Chr7:88628297-88628316 MsG0780041238.01.T01:intron 20.0%
!! TGAACCAATTAGAAAAATTT+AGG + Chr7:88628390-88628409 MsG0780041238.01.T01:intron 20.0%
!! TTAAGATGTTTATCCAAAAA+GGG - Chr7:88625333-88625352 None:intergenic 20.0%
!! TTATGATATGTCAATTTAGT+GGG + Chr7:88627536-88627555 MsG0780041238.01.T01:intron 20.0%
!! TTCATTTAACCATAAATCAA+AGG + Chr7:88628838-88628857 MsG0780041238.01.T01:intron 20.0%
!! TTCCCACAAATATATAAAAA+GGG + Chr7:88628458-88628477 MsG0780041238.01.T01:intron 20.0%
!! TTGGTGAATAAATTGAAATT+GGG - Chr7:88629225-88629244 None:intergenic 20.0%
!! TTTATGATATGTCAATTTAG+TGG + Chr7:88627535-88627554 MsG0780041238.01.T01:intron 20.0%
!!! AGGTTTTTTTTCAATTTTAG+GGG - Chr7:88629192-88629211 None:intergenic 20.0%
!!! GTTGTTTTTTTATGTTATTG+TGG + Chr7:88625153-88625172 MsG0780041238.01.T01:intron 20.0%
!!! GTTTCTTTTATGTTCTTTTT+TGG + Chr7:88627372-88627391 MsG0780041238.01.T01:intron 20.0%
!!! TAAGCCTAAATTTTTCTAAT+TGG - Chr7:88628397-88628416 None:intergenic 20.0%
!!! TAATTTTTCTGGTTTTGATT+AGG - Chr7:88629012-88629031 None:intergenic 20.0%
!!! TGTTTTTTTATGTTATTGTG+GGG + Chr7:88625155-88625174 MsG0780041238.01.T01:intron 20.0%
!!! TTTCTATTGCTTTTAATTTG+AGG - Chr7:88627333-88627352 None:intergenic 20.0%
!!! TTTTATATGAAAGATGATGA+AGG - Chr7:88628747-88628766 None:intergenic 20.0%
!!! TTTTTTACAAAACAATAGAC+AGG + Chr7:88627800-88627819 MsG0780041238.01.T01:intron 20.0%
! AATAGTTAAACCCAATAGAA+TGG + Chr7:88628075-88628094 MsG0780041238.01.T01:intron 25.0%
! AATGTGATTTCCATTCTATT+GGG - Chr7:88628088-88628107 None:intergenic 25.0%
! AATGTTTGAAAGAGGAAATT+AGG - Chr7:88627280-88627299 None:intergenic 25.0%
! ATAAATTGAAATTGGGGAAA+AGG - Chr7:88629218-88629237 None:intergenic 25.0%
! ATAATATAGTCTGTAGTTTG+TGG - Chr7:88627116-88627135 None:intergenic 25.0%
! ATTAAGGAAACACCAAAATA+TGG + Chr7:88627033-88627052 MsG0780041238.01.T01:intron 25.0%
! ATTCTCTATTAAGATTTGTC+AGG + Chr7:88626401-88626420 MsG0780041238.01.T01:intron 25.0%
! ATTGAACAATCATATCTTGT+GGG - Chr7:88624657-88624676 None:intergenic 25.0%
! ATTTAGGCTTATTAGATCAT+TGG + Chr7:88628406-88628425 MsG0780041238.01.T01:intron 25.0%
! GGAAGGTAAATATAAATTGA+AGG - Chr7:88626626-88626645 None:intergenic 25.0%
! GTTCCCACAAATATATAAAA+AGG + Chr7:88628457-88628476 MsG0780041238.01.T01:intron 25.0%
! TAAACTAAGCAAATCATAGA+TGG - Chr7:88626909-88626928 None:intergenic 25.0%
! TAAATTGAAATTGGGGAAAA+GGG - Chr7:88629217-88629236 None:intergenic 25.0%
! TATAAATCTGGGAAAAACAT+GGG + Chr7:88624588-88624607 MsG0780041238.01.T01:CDS 25.0%
! TATAATTTCAGAATGTGTTG+AGG + Chr7:88626786-88626805 MsG0780041238.01.T01:intron 25.0%
! TGGTGAAATTGGATAATTTA+GGG - Chr7:88624505-88624524 None:intergenic 25.0%
! TGGTGAATAAATTGAAATTG+GGG - Chr7:88629224-88629243 None:intergenic 25.0%
! TTAACCATAAATCAAAGGTA+TGG + Chr7:88628843-88628862 MsG0780041238.01.T01:intron 25.0%
! TTATAAATCTGGGAAAAACA+TGG + Chr7:88624587-88624606 MsG0780041238.01.T01:CDS 25.0%
! TTCTCTATTAAGATTTGTCA+GGG + Chr7:88626402-88626421 MsG0780041238.01.T01:intron 25.0%
! TTGGTGAAATTGGATAATTT+AGG - Chr7:88624506-88624525 None:intergenic 25.0%
!! AAACAAAAATTAGTTTGGTG+TGG - Chr7:88628672-88628691 None:intergenic 25.0%
!! AAATTGCATTTTTGTGATTC+TGG - Chr7:88629157-88629176 None:intergenic 25.0%
!! AAATTGGATAATTTAGGGTT+TGG - Chr7:88624500-88624519 None:intergenic 25.0%
!! ATAATTTAGGGTTTGGAAAA+TGG - Chr7:88624493-88624512 None:intergenic 25.0%
!! CTATACATTATTTGAGATGT+GGG + Chr7:88626870-88626889 MsG0780041238.01.T01:intron 25.0%
!! TCTATACATTATTTGAGATG+TGG + Chr7:88626869-88626888 MsG0780041238.01.T01:intron 25.0%
!!! GATTCATTGTTTTATGTGTA+GGG + Chr7:88624878-88624897 MsG0780041238.01.T01:intron 25.0%
!!! TGATTCATTGTTTTATGTGT+AGG + Chr7:88624877-88624896 MsG0780041238.01.T01:intron 25.0%
!!! TTTTTTGAAAGAAGGATAGA+TGG + Chr7:88627881-88627900 MsG0780041238.01.T01:intron 25.0%
AAAAATCTAGCGCATTTAGT+TGG + Chr7:88627350-88627369 MsG0780041238.01.T01:intron 30.0%
AAACTTTGCACAAAAACCAA+TGG - Chr7:88625294-88625313 None:intergenic 30.0%
AAATTCTCTAATCCTGTCAT+TGG + Chr7:88626321-88626340 MsG0780041238.01.T01:intron 30.0%
AACAACCTTATGTATACACA+AGG - Chr7:88628327-88628346 None:intergenic 30.0%
AACCAAAACATCCATAAATC+TGG - Chr7:88629349-88629368 None:intergenic 30.0%
AACTTTGCACAAAAACCAAT+GGG - Chr7:88625293-88625312 None:intergenic 30.0%
AAGTCAGTAATAGCATAATC+TGG - Chr7:88626066-88626085 None:intergenic 30.0%
AAGTGCTTATATAGGATATG+AGG - Chr7:88625380-88625399 None:intergenic 30.0%
AATATATTGTGTGGAGCTTA+TGG + Chr7:88625455-88625474 MsG0780041238.01.T01:intron 30.0%
AGTGAGTGATTATACAAAGT+TGG - Chr7:88627439-88627458 None:intergenic 30.0%
AGTTAACACCAGGATTTATT+TGG - Chr7:88628512-88628531 None:intergenic 30.0%
AGTTGTATTGTAACGTTTGA+AGG + Chr7:88627138-88627157 MsG0780041238.01.T01:intron 30.0%
ATTCATTTACTTGTGCCTTA+AGG + Chr7:88627206-88627225 MsG0780041238.01.T01:intron 30.0%
CAAGGTAAATCAATGTTGAA+GGG - Chr7:88626268-88626287 None:intergenic 30.0%
CAATGTGATTTCCATTCTAT+TGG - Chr7:88628089-88628108 None:intergenic 30.0%
GAATTATACTCCTCATCTTA+TGG + Chr7:88628933-88628952 MsG0780041238.01.T01:intron 30.0%
GATTGAACAATCATATCTTG+TGG - Chr7:88624658-88624677 None:intergenic 30.0%
GTTAAATGAAGAGTTCTCTT+TGG - Chr7:88628828-88628847 None:intergenic 30.0%
GTTTATTCATCAGTACATGT+GGG + Chr7:88626963-88626982 MsG0780041238.01.T01:intron 30.0%
TCAAGGTAAATCAATGTTGA+AGG - Chr7:88626269-88626288 None:intergenic 30.0%
TGTTTATTCATCAGTACATG+TGG + Chr7:88626962-88626981 MsG0780041238.01.T01:intron 30.0%
TTAGAATCTGGTCTCAAATT+TGG + Chr7:88627766-88627785 MsG0780041238.01.T01:intron 30.0%
TTAGAGAATTTGAGAGATCA+AGG - Chr7:88626312-88626331 None:intergenic 30.0%
TTCATTTACTTGTGCCTTAA+GGG + Chr7:88627207-88627226 MsG0780041238.01.T01:intron 30.0%
TTGATCAAGTCTATTGTCTT+GGG + Chr7:88625960-88625979 MsG0780041238.01.T01:intron 30.0%
TTGGCAACAGAGAAAAATTA+AGG - Chr7:88628493-88628512 None:intergenic 30.0%
TTTAAACCCAAATGTCTACA+GGG + Chr7:88628531-88628550 MsG0780041238.01.T01:intron 30.0%
TTTACATCATAACTACATCG+AGG - Chr7:88627586-88627605 None:intergenic 30.0%
TTTGAAAGAGGAAATTAGGA+AGG - Chr7:88627276-88627295 None:intergenic 30.0%
TTTGATCAAGTCTATTGTCT+TGG + Chr7:88625959-88625978 MsG0780041238.01.T01:intron 30.0%
! ACGCCCTTTTTATATATTTG+TGG - Chr7:88628464-88628483 None:intergenic 30.0%
! ATCCAGATTTATGGATGTTT+TGG + Chr7:88629344-88629363 MsG0780041238.01.T01:three_prime_UTR 30.0%
! CGCCCTTTTTATATATTTGT+GGG - Chr7:88628463-88628482 None:intergenic 30.0%
! GTCGAAACATATTTAGAATC+TGG + Chr7:88627754-88627773 MsG0780041238.01.T01:intron 30.0%
! TTGCTTGTTGATGTGAAAAT+TGG + Chr7:88627707-88627726 MsG0780041238.01.T01:intron 30.0%
!! GTTTACGACTTGGAATATTT+TGG + Chr7:88626725-88626744 MsG0780041238.01.T01:intron 30.0%
!! TGACTACATTTTGGTGAAAT+TGG - Chr7:88624516-88624535 None:intergenic 30.0%
!! TTGCAAAGTACTGTTCATTA+CGG + Chr7:88629114-88629133 MsG0780041238.01.T01:intron 30.0%
!! TTTAATTTGAGGACGAGATT+AGG - Chr7:88627322-88627341 None:intergenic 30.0%
!!! AACATCTGGATTAGTCTTTT+TGG + Chr7:88626658-88626677 MsG0780041238.01.T01:intron 30.0%
!!! ACTAATCCAGATGTTACTTT+TGG - Chr7:88626653-88626672 None:intergenic 30.0%
!!! ATTTTAGCTTGAACCCTTTT+TGG + Chr7:88625317-88625336 MsG0780041238.01.T01:intron 30.0%
!!! GTGTCTATCTATCCATTTTT+TGG - Chr7:88627859-88627878 None:intergenic 30.0%
!!! TATCTATCCATTTTTTGGTG+CGG - Chr7:88627854-88627873 None:intergenic 30.0%
!!! TATGATTTTGATTGCTGACT+CGG + Chr7:88627676-88627695 MsG0780041238.01.T01:intron 30.0%
!!! TTATGGATGTTTTGGTTGAA+TGG + Chr7:88629352-88629371 MsG0780041238.01.T01:three_prime_UTR 30.0%
AAGCACTTGTAAACCAACTT+GGG - Chr7:88625522-88625541 None:intergenic 35.0%
AAGCACTTGTAAGTCTGTTT+GGG - Chr7:88625231-88625250 None:intergenic 35.0%
AAGCAGACAATCTGGTTATT+AGG - Chr7:88625575-88625594 None:intergenic 35.0%
AATGCTAATTAGTGCCCTTA+AGG - Chr7:88627224-88627243 None:intergenic 35.0%
AATTAGCAAATGCCAATGAC+AGG - Chr7:88626336-88626355 None:intergenic 35.0%
ACAATCTTCTTCCTCTTACT+TGG + Chr7:88628911-88628930 MsG0780041238.01.T01:intron 35.0%
ACAGGGATCAACATTATAGA+TGG + Chr7:88628548-88628567 MsG0780041238.01.T01:intron 35.0%
ACTTTGCACAAAAACCAATG+GGG - Chr7:88625292-88625311 None:intergenic 35.0%
ATCAAAGCTGAGAGATATCA+AGG - Chr7:88626286-88626305 None:intergenic 35.0%
ATGGAATGTTACCATCGTTA+CGG - Chr7:88624474-88624493 None:intergenic 35.0%
ATTTCATGAACCAAAGGTCT+GGG - Chr7:88627090-88627109 None:intergenic 35.0%
CGAATTTCGAATCTGAGAAT+TGG - Chr7:88629244-88629263 None:intergenic 35.0%
CTCTTTCAAACATTACAACC+AGG + Chr7:88627286-88627305 MsG0780041238.01.T01:intron 35.0%
CTGGTTGTAATGTTTGAAAG+AGG - Chr7:88627288-88627307 None:intergenic 35.0%
CTTTAAACCCAAATGTCTAC+AGG + Chr7:88628530-88628549 MsG0780041238.01.T01:intron 35.0%
GAAACACCAAAATATGGTTG+TGG + Chr7:88627039-88627058 MsG0780041238.01.T01:intron 35.0%
GAATGAAACTTGCATCTGAT+TGG - Chr7:88624773-88624792 None:intergenic 35.0%
GACAATCTGGTTATTAGGTT+TGG - Chr7:88625570-88625589 None:intergenic 35.0%
GGAGTATAATTCCAAGTAAG+AGG - Chr7:88628925-88628944 None:intergenic 35.0%
GTATCACAGAAAGCAATTGT+TGG - Chr7:88625697-88625716 None:intergenic 35.0%
GTTGAGATTAGGGTTATGTA+TGG - Chr7:88624309-88624328 None:intergenic 35.0%
TAAAAACTGCGACTTTCAGA+TGG + Chr7:88624429-88624448 MsG0780041238.01.T01:CDS 35.0%
TAAGCACTTGTAAACCAACT+TGG - Chr7:88625523-88625542 None:intergenic 35.0%
TAAGCACTTGTAAGTCTGTT+TGG - Chr7:88625232-88625251 None:intergenic 35.0%
TCAGGTTCTCTATAAAGAAC+AGG - Chr7:88626006-88626025 None:intergenic 35.0%
TGGTATCTTACAATTAAGCG+CGG + Chr7:88628190-88628209 MsG0780041238.01.T01:intron 35.0%
TGTTCTTTATAGAGAACCTG+AGG + Chr7:88626005-88626024 MsG0780041238.01.T01:intron 35.0%
TTCACGTCAGATGCTAATTA+AGG + Chr7:88627017-88627036 MsG0780041238.01.T01:intron 35.0%
TTCGAAATTCGAATTTGCAG+AGG + Chr7:88629253-88629272 MsG0780041238.01.T01:three_prime_UTR 35.0%
TTTAACTCCGCACCAAAAAA+TGG + Chr7:88627844-88627863 MsG0780041238.01.T01:intron 35.0%
! ACAGTATAGGATGTCTGTTT+TGG + Chr7:88625773-88625792 MsG0780041238.01.T01:CDS 35.0%
! CATATGCAATGTTCACGTTT+TGG - Chr7:88628887-88628906 None:intergenic 35.0%
! CGGTAACGTCATAATTTTTC+TGG - Chr7:88629023-88629042 None:intergenic 35.0%
! CTCAAATTTGCTCAGTATAC+TGG + Chr7:88624706-88624725 MsG0780041238.01.T01:CDS 35.0%
! GGAACCATACCTTTGATTTA+TGG - Chr7:88628850-88628869 None:intergenic 35.0%
! GTAAGCCTTGTGTATACATA+AGG + Chr7:88628319-88628338 MsG0780041238.01.T01:intron 35.0%
! TGGTTGATTTCATGAACCAA+AGG - Chr7:88627096-88627115 None:intergenic 35.0%
! TTCCTACCACAACCATATTT+TGG - Chr7:88627048-88627067 None:intergenic 35.0%
! TTGGGTTTAAAGTTAACACC+AGG - Chr7:88628522-88628541 None:intergenic 35.0%
! TTTTAGCAGAGTAACAATCG+AGG + Chr7:88629285-88629304 MsG0780041238.01.T01:three_prime_UTR 35.0%
!! ATCTGATTGGTAAAAGTACC+AGG - Chr7:88624760-88624779 None:intergenic 35.0%
!! CAGAAGTATTGTTTACGACT+TGG + Chr7:88626715-88626734 MsG0780041238.01.T01:intron 35.0%
!! GCTATTACTGACTTTAATGC+AGG + Chr7:88626072-88626091 MsG0780041238.01.T01:CDS 35.0%
!!! AGACACGCTTTTTTGAAAGA+AGG + Chr7:88627873-88627892 MsG0780041238.01.T01:intron 35.0%
!!! ATGATTTTGATTGCTGACTC+GGG + Chr7:88627677-88627696 MsG0780041238.01.T01:intron 35.0%
!!! ATGTTACTTTTGGAAAGGGA+AGG - Chr7:88626643-88626662 None:intergenic 35.0%
!!! CCAGATGTTACTTTTGGAAA+GGG - Chr7:88626647-88626666 None:intergenic 35.0%
!!! GTTCTTTTTTGGCTTCTTTG+AGG + Chr7:88627383-88627402 MsG0780041238.01.T01:intron 35.0%
!!! TCCAGATGTTACTTTTGGAA+AGG - Chr7:88626648-88626667 None:intergenic 35.0%
!!! TTTTAGCTTTGGCCCAATTT+TGG + Chr7:88624995-88625014 MsG0780041238.01.T01:intron 35.0%
AAACGTAGACCAAGAACAGA+GGG - Chr7:88626820-88626839 None:intergenic 40.0%
ACAGACAAAAGCAGACAATC+TGG - Chr7:88625583-88625602 None:intergenic 40.0%
AGATTAGGAATGGTTGAACC+TGG - Chr7:88627307-88627326 None:intergenic 40.0%
ATGGAGCAACTTCAACAGTT+AGG - Chr7:88624290-88624309 None:intergenic 40.0%
ATGTTATTGTGGGGAGCTTA+TGG + Chr7:88625164-88625183 MsG0780041238.01.T01:intron 40.0%
CACCAAAATATGGTTGTGGT+AGG + Chr7:88627043-88627062 MsG0780041238.01.T01:intron 40.0%
CCCTTTCCAAAAGTAACATC+TGG + Chr7:88626644-88626663 MsG0780041238.01.T01:intron 40.0%
CGCATAATTTGACACTGCAA+TGG + Chr7:88627732-88627751 MsG0780041238.01.T01:intron 40.0%
CTCTGTTGCCAAATAAATCC+TGG + Chr7:88628501-88628520 MsG0780041238.01.T01:intron 40.0%
GAAACCTGATGATCAGTTCT+TGG - Chr7:88624826-88624845 None:intergenic 40.0%
GAACTGCATCATTCCATGTT+TGG - Chr7:88626137-88626156 None:intergenic 40.0%
GATTTCATGAACCAAAGGTC+TGG - Chr7:88627091-88627110 None:intergenic 40.0%
GTAATAGCATAATCTGGTGC+AGG - Chr7:88626060-88626079 None:intergenic 40.0%
GTTCAATCTGCTAGACCTTA+TGG + Chr7:88624670-88624689 MsG0780041238.01.T01:CDS 40.0%
GTTGATCCCTGTAGACATTT+GGG - Chr7:88628540-88628559 None:intergenic 40.0%
TATGTGGCAATTGTTCCCAT+CGG + Chr7:88625922-88625941 MsG0780041238.01.T01:intron 40.0%
TCGAATTTGCAGAGGAATGA+AGG + Chr7:88629261-88629280 MsG0780041238.01.T01:three_prime_UTR 40.0%
TCTTTATAGAGAACCTGAGG+AGG + Chr7:88626008-88626027 MsG0780041238.01.T01:intron 40.0%
TGAAATTGGGGAAAAGGGTT+AGG - Chr7:88629212-88629231 None:intergenic 40.0%
TGATCCAAGAACTGATCATC+AGG + Chr7:88624819-88624838 MsG0780041238.01.T01:CDS 40.0%
TGGAGCAACTTCAACAGTTA+GGG - Chr7:88624289-88624308 None:intergenic 40.0%
TGTTGATCCCTGTAGACATT+TGG - Chr7:88628541-88628560 None:intergenic 40.0%
TTACCATGACATCCCACTTA+AGG - Chr7:88625845-88625864 None:intergenic 40.0%
TTTGAGGACGAGATTAGGAA+TGG - Chr7:88627317-88627336 None:intergenic 40.0%
! ATTGTTCCCATCGGTTGAAT+TGG + Chr7:88625931-88625950 MsG0780041238.01.T01:intron 40.0%
! GCAATGTGAAGTATCCTATG+TGG + Chr7:88625906-88625925 MsG0780041238.01.T01:intron 40.0%
! TCTTGGGTTTTCTTTGATGC+AGG + Chr7:88625976-88625995 MsG0780041238.01.T01:intron 40.0%
! TGACTGTGATGTGAGTTTTG+AGG - Chr7:88628971-88628990 None:intergenic 40.0%
! TTGCGAGTACTGTTGTTCAT+TGG + Chr7:88629067-88629086 MsG0780041238.01.T01:intron 40.0%
! TTGTAGGTGCTTTTCCTGTT+TGG + Chr7:88627408-88627427 MsG0780041238.01.T01:intron 40.0%
! TTTAGTACCGAGATGGACAT+CGG - Chr7:88624413-88624432 None:intergenic 40.0%
!! CACGTTTTGGTACACTCTAT+AGG - Chr7:88628874-88628893 None:intergenic 40.0%
!! GTTTTGGTACACTCTATAGG+AGG - Chr7:88628871-88628890 None:intergenic 40.0%
!!! AGGATGTCTGTTTTGGCTTT+TGG + Chr7:88625780-88625799 MsG0780041238.01.T01:CDS 40.0%
!!! TGATTTTGATTGCTGACTCG+GGG + Chr7:88627678-88627697 MsG0780041238.01.T01:intron 40.0%
!!! TGTGATGTGAGTTTTGAGGA+TGG - Chr7:88628967-88628986 None:intergenic 40.0%
!!! TTTTGGCTTTTGGCTAGGAT+GGG + Chr7:88625790-88625809 MsG0780041238.01.T01:CDS 40.0%
AAACCTGCCAATTCAACCGA+TGG - Chr7:88625941-88625960 None:intergenic 45.0%
AACAAGGGCAAGCACAGTAT+AGG + Chr7:88625760-88625779 MsG0780041238.01.T01:CDS 45.0%
AACCTGCCAATTCAACCGAT+GGG - Chr7:88625940-88625959 None:intergenic 45.0%
AACGTAGACCAAGAACAGAG+GGG - Chr7:88626819-88626838 None:intergenic 45.0%
AAGTTTCATTCAGTGAGCCC+AGG + Chr7:88624782-88624801 MsG0780041238.01.T01:CDS 45.0%
AGAACAGCTCTCTGTCCATA+AGG - Chr7:88624688-88624707 None:intergenic 45.0%
AGATTTGTCTTGCAGCTGCA+GGG + Chr7:88626490-88626509 MsG0780041238.01.T01:intron 45.0%
AGCAGAGTGAGGTTGAGATT+AGG - Chr7:88624320-88624339 None:intergenic 45.0%
AGTACATGTGGGTAAGTCCT+TGG + Chr7:88626974-88626993 MsG0780041238.01.T01:intron 45.0%
ATCAGTGAGGATAAGAAGCC+TGG - Chr7:88624803-88624822 None:intergenic 45.0%
ATCGATCAAGTACCAGCTTC+TGG - Chr7:88626199-88626218 None:intergenic 45.0%
CAAAAACCAATGGGGCTGTT+TGG - Chr7:88625284-88625303 None:intergenic 45.0%
CAAACGTAGACCAAGAACAG+AGG - Chr7:88626821-88626840 None:intergenic 45.0%
CAAAGTTGGACAGACCAAAC+AGG - Chr7:88627425-88627444 None:intergenic 45.0%
CCAATGTCGACATATCGCAT+AGG - Chr7:88625727-88625746 None:intergenic 45.0%
CCTATGCGATATGTCGACAT+TGG + Chr7:88625724-88625743 MsG0780041238.01.T01:CDS 45.0%
CTTGTAAACCAACTTGGGAG+AGG - Chr7:88625517-88625536 None:intergenic 45.0%
GATCAGTTCTTGGATCAGTG+AGG - Chr7:88624816-88624835 None:intergenic 45.0%
GATGGGAACAATTGCCACAT+AGG - Chr7:88625923-88625942 None:intergenic 45.0%
GCAGAGTGAGGTTGAGATTA+GGG - Chr7:88624319-88624338 None:intergenic 45.0%
GGTATGCAAGCCATAAGATG+AGG - Chr7:88628946-88628965 None:intergenic 45.0%
TAAAAACCGTTGGATCGTGC+AGG + Chr7:88628625-88628644 MsG0780041238.01.T01:intron 45.0%
TAGATTTGTCTTGCAGCTGC+AGG + Chr7:88626489-88626508 MsG0780041238.01.T01:intron 45.0%
TCAGTGAGGATAAGAAGCCT+GGG - Chr7:88624802-88624821 None:intergenic 45.0%
TCGATCAAGTACCAGCTTCT+GGG - Chr7:88626198-88626217 None:intergenic 45.0%
TGTTTGTGTGCAGCCAATCA+AGG + Chr7:88625651-88625670 MsG0780041238.01.T01:intron 45.0%
! CTTTCTGAGAGAGTTGACGA+GGG - Chr7:88624363-88624382 None:intergenic 45.0%
! TCTTTCTGAGAGAGTTGACG+AGG - Chr7:88624364-88624383 None:intergenic 45.0%
! TTTCTGAGAGAGTTGACGAG+GGG - Chr7:88624362-88624381 None:intergenic 45.0%
!! CAGGAGCAGGTATTTGTTGT+GGG - Chr7:88626541-88626560 None:intergenic 45.0%
!! CTATCCCCAATGATGGACAA+TGG + Chr7:88626097-88626116 MsG0780041238.01.T01:CDS 45.0%
!! GTTTTAAGCCTCTCCCAAGT+TGG + Chr7:88625506-88625525 MsG0780041238.01.T01:intron 45.0%
!! TGGCTTCTTTGAGGTGTTGT+AGG + Chr7:88627392-88627411 MsG0780041238.01.T01:intron 45.0%
!!! CGCAGTTTTTAGTACCGAGA+TGG - Chr7:88624420-88624439 None:intergenic 45.0%
!!! GTCTGTTTTGGCTTTTGGCT+AGG + Chr7:88625785-88625804 MsG0780041238.01.T01:CDS 45.0%
!!! GTTTTGGCTTTTGGCTAGGA+TGG + Chr7:88625789-88625808 MsG0780041238.01.T01:CDS 45.0%
!!! TTTGGCTTTTGGCTAGGATG+GGG + Chr7:88625791-88625810 MsG0780041238.01.T01:CDS 45.0%
!! TTTATTTAATAAAAAATCAA+AGG - Chr7:88628609-88628628 None:intergenic 5.0%
!!! AAAAACATATATTTTTTTTA+GGG - Chr7:88627932-88627951 None:intergenic 5.0%
ACGTAGACCAAGAACAGAGG+GGG - Chr7:88626818-88626837 None:intergenic 50.0%
ACTGGCTGGGAATAAGCTAG+TGG + Chr7:88626581-88626600 MsG0780041238.01.T01:intron 50.0%
AGAACTGCTGGAATAGGCTC+TGG - Chr7:88626159-88626178 None:intergenic 50.0%
AGCAGGCCATTGTCCATCAT+TGG - Chr7:88626106-88626125 None:intergenic 50.0%
ATGACATCCCACTTAAGGCC+AGG - Chr7:88625840-88625859 None:intergenic 50.0%
ATTTGTCTTGCAGCTGCAGG+GGG + Chr7:88626492-88626511 MsG0780041238.01.T01:intron 50.0%
CAGCAGTTCTGCTGTCAACT+GGG + Chr7:88626169-88626188 MsG0780041238.01.T01:CDS 50.0%
CAGGCCATTGTCCATCATTG+GGG - Chr7:88626104-88626123 None:intergenic 50.0%
CATAGACCTGCACGATCCAA+CGG - Chr7:88628634-88628653 None:intergenic 50.0%
CATGTTTGGTCGATAGCAGC+AGG - Chr7:88626123-88626142 None:intergenic 50.0%
CCAAGAGCAGCTTCCTTGAT+TGG - Chr7:88625667-88625686 None:intergenic 50.0%
CCAATCAAGGAAGCTGCTCT+TGG + Chr7:88625664-88625683 MsG0780041238.01.T01:CDS 50.0%
CCACAACAAATACCTGCTCC+TGG + Chr7:88626539-88626558 MsG0780041238.01.T01:intron 50.0%
CCTTGGCATGAGCAAAACAC+TGG + Chr7:88626991-88627010 MsG0780041238.01.T01:intron 50.0%
CGCAAATCTCCTTCCAAACC+TGG - Chr7:88629052-88629071 None:intergenic 50.0%
CTGCTGCTATCGACCAAACA+TGG + Chr7:88626121-88626140 MsG0780041238.01.T01:CDS 50.0%
CTTATTCCCAGCCAGTTGCT+TGG - Chr7:88626577-88626596 None:intergenic 50.0%
GACAGCAGAACTGCTGGAAT+AGG - Chr7:88626165-88626184 None:intergenic 50.0%
GATTTGTCTTGCAGCTGCAG+GGG + Chr7:88626491-88626510 MsG0780041238.01.T01:intron 50.0%
GCAGGCCATTGTCCATCATT+GGG - Chr7:88626105-88626124 None:intergenic 50.0%
GCAGGTTCTATCCCCAATGA+TGG + Chr7:88626090-88626109 MsG0780041238.01.T01:CDS 50.0%
GGAATCCCTGCCAACAACAA+GGG + Chr7:88625745-88625764 MsG0780041238.01.T01:CDS 50.0%
GTCAATCCAAACAGCCCCAT+TGG + Chr7:88625275-88625294 MsG0780041238.01.T01:intron 50.0%
GTGATTTCCCCCTCTGTTCT+TGG + Chr7:88626808-88626827 MsG0780041238.01.T01:intron 50.0%
GTGCCAATGCTATTGCTGGA+AGG + Chr7:88624728-88624747 MsG0780041238.01.T01:CDS 50.0%
GTGCCTTCCAGCAATAGCAT+TGG - Chr7:88624734-88624753 None:intergenic 50.0%
GTTGAGTCCATCCAAGCAAC+TGG + Chr7:88626563-88626582 MsG0780041238.01.T01:intron 50.0%
TAGAGAACCTGAGGAGGCAA+AGG + Chr7:88626014-88626033 MsG0780041238.01.T01:intron 50.0%
TGGAATCCCTGCCAACAACA+AGG + Chr7:88625744-88625763 MsG0780041238.01.T01:CDS 50.0%
! ACTGGTGCCAATGCTATTGC+TGG + Chr7:88624724-88624743 MsG0780041238.01.T01:CDS 50.0%
! ACTGTGCTTGCCCTTGTTGT+TGG - Chr7:88625758-88625777 None:intergenic 50.0%
! ATCTTCAAGCGCCGTAACGA+TGG + Chr7:88624460-88624479 MsG0780041238.01.T01:CDS 50.0%
! CCAGGAGCAGGTATTTGTTG+TGG - Chr7:88626542-88626561 None:intergenic 50.0%
! CCAGTGTTTTGCTCATGCCA+AGG - Chr7:88626994-88627013 None:intergenic 50.0%
! TGGCCTTAAGTGGGATGTCA+TGG + Chr7:88625839-88625858 MsG0780041238.01.T01:intron 50.0%
! TTCCCATCGGTTGAATTGGC+AGG + Chr7:88625935-88625954 MsG0780041238.01.T01:intron 50.0%
!! AGCAGGTATTTGTTGTGGGC+TGG - Chr7:88626537-88626556 None:intergenic 50.0%
AGTCCATCCAAGCAACTGGC+TGG + Chr7:88626567-88626586 MsG0780041238.01.T01:intron 55.0%
ATGACGTTACCGTAGCAGCC+AGG + Chr7:88629031-88629050 MsG0780041238.01.T01:intron 55.0%
ATGGACTCAACTCCAGGAGC+AGG - Chr7:88626554-88626573 None:intergenic 55.0%
CCAGCAGTTCTGCTGTCAAC+TGG + Chr7:88626168-88626187 MsG0780041238.01.T01:CDS 55.0%
CCAGTTGACAGCAGAACTGC+TGG - Chr7:88626171-88626190 None:intergenic 55.0%
CCTTCCAAACCTGGCTGCTA+CGG - Chr7:88629043-88629062 None:intergenic 55.0%
CGCAGTAAGACCCAGACCTT+TGG + Chr7:88627077-88627096 MsG0780041238.01.T01:intron 55.0%
GTCCATCCAAGCAACTGGCT+GGG + Chr7:88626568-88626587 MsG0780041238.01.T01:intron 55.0%
GTTACCGTAGCAGCCAGGTT+TGG + Chr7:88629036-88629055 MsG0780041238.01.T01:intron 55.0%
TCTTGCTCCTTTGCCTCCTC+AGG - Chr7:88626024-88626043 None:intergenic 55.0%
TGAGGAGGCAAAGGAGCAAG+AGG + Chr7:88626023-88626042 MsG0780041238.01.T01:CDS 55.0%
TTCCCAGCCAGTTGCTTGGA+TGG - Chr7:88626573-88626592 None:intergenic 55.0%
TTTGTCTTGCAGCTGCAGGG+GGG + Chr7:88626493-88626512 MsG0780041238.01.T01:intron 55.0%
! AGTACCGAGATGGACATCGG+CGG - Chr7:88624410-88624429 None:intergenic 55.0%
! GCTTGGATGGACTCAACTCC+AGG - Chr7:88626560-88626579 None:intergenic 55.0%
!! ACCATTCGCCTGGCCTTAAG+TGG + Chr7:88625829-88625848 MsG0780041238.01.T01:CDS 55.0%
!! CCATTCGCCTGGCCTTAAGT+GGG + Chr7:88625830-88625849 MsG0780041238.01.T01:CDS 55.0%
!! GCTTGCCCTTGTTGTTGGCA+GGG - Chr7:88625753-88625772 None:intergenic 55.0%
!! TGCTTGCCCTTGTTGTTGGC+AGG - Chr7:88625754-88625773 None:intergenic 55.0%
AGGATGGGGTTGCAGATGCG+TGG + Chr7:88625805-88625824 MsG0780041238.01.T01:CDS 60.0%
CATCGGCGGCAAGCATCATC+TGG - Chr7:88624396-88624415 None:intergenic 60.0%
CCCACTTAAGGCCAGGCGAA+TGG - Chr7:88625833-88625852 None:intergenic 60.0%
CCGTAGCAGCCAGGTTTGGA+AGG + Chr7:88629040-88629059 MsG0780041238.01.T01:intron 60.0%
CTGAGAGAGTTGACGAGGGG+CGG - Chr7:88624359-88624378 None:intergenic 60.0%
CTTGCCGCCGATGTCCATCT+CGG + Chr7:88624403-88624422 MsG0780041238.01.T01:CDS 60.0%
GATGCGTGGAACCATTCGCC+TGG + Chr7:88625819-88625838 MsG0780041238.01.T01:CDS 60.0%
TTGTCTTGCAGCTGCAGGGG+GGG + Chr7:88626494-88626513 MsG0780041238.01.T01:intron 60.0%
! ATTGCTGGAAGGCACACGCC+TGG + Chr7:88624739-88624758 MsG0780041238.01.T01:CDS 60.0%
! CTCTGCTACTTCCGCCACCA+TGG + Chr7:88624333-88624352 MsG0780041238.01.T01:exon 60.0%
! GTGGCGGAAGTAGCAGAGTG+AGG - Chr7:88624331-88624350 None:intergenic 60.0%
CAACTGGGCAGCCCAGAAGC+TGG + Chr7:88626184-88626203 MsG0780041238.01.T01:CDS 65.0%
TGCAGCTGCAGGGGGGGATT+GGG + Chr7:88626500-88626519 MsG0780041238.01.T01:intron 65.0%
TTGCAGCTGCAGGGGGGGAT+TGG + Chr7:88626499-88626518 MsG0780041238.01.T01:intron 65.0%
GAGTTGACGAGGGGCGGCCA+TGG - Chr7:88624353-88624372 None:intergenic 70.0%
GCAGCTGCAGGGGGGGATTG+GGG + Chr7:88626501-88626520 MsG0780041238.01.T01:intron 70.0%
TTGACGAGGGGCGGCCATGG+TGG - Chr7:88624350-88624369 None:intergenic 70.0%
ACGAGGGGCGGCCATGGTGG+CGG - Chr7:88624347-88624366 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 88624261 88629384 88624261 ID=MsG0780041238.01;Name=MsG0780041238.01
Chr7 mRNA 88624261 88629384 88624261 ID=MsG0780041238.01.T01;Parent=MsG0780041238.01;Name=MsG0780041238.01.T01;_AED=0.41;_eAED=0.41;_QI=91|0.5|0.4|0.8|1|1|5|132|257
Chr7 exon 88624261 88624481 88624261 ID=MsG0780041238.01.T01:exon:20519;Parent=MsG0780041238.01.T01
Chr7 exon 88624578 88624840 88624578 ID=MsG0780041238.01.T01:exon:20520;Parent=MsG0780041238.01.T01
Chr7 exon 88625664 88625854 88625664 ID=MsG0780041238.01.T01:exon:20521;Parent=MsG0780041238.01.T01
Chr7 exon 88626017 88626205 88626017 ID=MsG0780041238.01.T01:exon:20522;Parent=MsG0780041238.01.T01
Chr7 exon 88629252 88629384 88629252 ID=MsG0780041238.01.T01:exon:20523;Parent=MsG0780041238.01.T01
Chr7 five_prime_UTR 88624261 88624351 88624261 ID=MsG0780041238.01.T01:five_prime_utr;Parent=MsG0780041238.01.T01
Chr7 CDS 88624352 88624481 88624352 ID=MsG0780041238.01.T01:cds;Parent=MsG0780041238.01.T01
Chr7 CDS 88624578 88624840 88624578 ID=MsG0780041238.01.T01:cds;Parent=MsG0780041238.01.T01
Chr7 CDS 88625664 88625854 88625664 ID=MsG0780041238.01.T01:cds;Parent=MsG0780041238.01.T01
Chr7 CDS 88626017 88626205 88626017 ID=MsG0780041238.01.T01:cds;Parent=MsG0780041238.01.T01
Chr7 CDS 88629252 88629252 88629252 ID=MsG0780041238.01.T01:cds;Parent=MsG0780041238.01.T01
Chr7 three_prime_UTR 88629253 88629384 88629253 ID=MsG0780041238.01.T01:three_prime_utr;Parent=MsG0780041238.01.T01
Gene Sequence

>MsG0780041238.01.T01

ATGGCCGCCCCTCGTCAACTCTCTCAGAAAGAAGCTGATATCCAGATGATGCTTGCCGCCGATGTCCATCTCGGTACTAAAAACTGCGACTTTCAGATGGAAAGATACATCTTCAAGCGCCGTAACGATGGGATTTATATTATAAATCTGGGAAAAACATGGGAAAAGCTTCAACTTGCTGCTCGAGTTATTGTTGCAATTGAAAACCCACAAGATATGATTGTTCAATCTGCTAGACCTTATGGACAGAGAGCTGTTCTCAAATTTGCTCAGTATACTGGTGCCAATGCTATTGCTGGAAGGCACACGCCTGGTACTTTTACCAATCAGATGCAAGTTTCATTCAGTGAGCCCAGGCTTCTTATCCTCACTGATCCAAGAACTGATCATCAGCCAATCAAGGAAGCTGCTCTTGGAAATATTCCAACAATTGCTTTCTGTGATACTGATTCGCCTATGCGATATGTCGACATTGGAATCCCTGCCAACAACAAGGGCAAGCACAGTATAGGATGTCTGTTTTGGCTTTTGGCTAGGATGGGGTTGCAGATGCGTGGAACCATTCGCCTGGCCTTAAGTGGGATAGAACCTGAGGAGGCAAAGGAGCAAGAGGAAGATGATGTTCCTGCACCAGATTATGCTATTACTGACTTTAATGCAGGTTCTATCCCCAATGATGGACAATGGCCTGCTGCTATCGACCAAACATGGAATGATGCAGTTCCAGAGCCTATTCCAGCAGTTCTGCTGTCAACTGGGCAGCCCAGAAGCTGA
Protein sequence

>MsG0780041238.01.T01

MAAPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDMIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQVSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMGLQMRGTIRLALSGIEPEEAKEQEEDDVPAPDYAITDFNAGSIPNDGQWPAAIDQTWNDAVPEPIPAVLLSTGQPRS*