AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009190 MtrunA17_Chr1g0157621 91.304 529 45 1 1 529 1 528 0.0 974
Msa0009190 MtrunA17_Chr1g0157611 87.054 533 69 0 1 533 37 569 0.0 933
Msa0009190 MtrunA17_Chr1g0157601 83.908 522 84 0 1 522 36 557 0.0 921
Msa0009190 MtrunA17_Chr2g0331521 46.555 537 278 5 1 531 43 576 2.42e-172 499
Msa0009190 MtrunA17_Chr4g0003761 46.617 532 275 5 1 527 51 578 1.42e-171 498
Msa0009190 MtrunA17_Chr2g0331511 45.905 525 277 4 1 520 42 564 2.39e-170 496
Msa0009190 MtrunA17_Chr2g0331471 47.243 544 270 7 1 531 109 648 8.17e-170 497
Msa0009190 MtrunA17_Chr2g0331481 46.507 544 274 7 1 531 46 585 1.35e-167 489
Msa0009190 MtrunA17_Chr8g0390331 44.444 531 285 6 1 526 36 561 5.18e-157 460
Msa0009190 MtrunA17_Chr1g0177591 43.346 526 276 6 2 524 64 570 8.34e-156 456
Msa0009190 MtrunA17_Chr1g0147631 44.007 534 286 5 1 527 46 573 2.31e-155 456
Msa0009190 MtrunA17_Chr2g0331461 43.773 546 290 7 1 533 46 587 5.07e-150 444
Msa0009190 MtrunA17_Chr1g0177611 42.391 460 243 6 68 524 1 441 7.78e-132 390
Msa0009190 MtrunA17_Chr1g0177631 42.391 460 243 6 68 524 1 441 2.65e-126 377
Msa0009190 MtrunA17_Chr5g0415791 36.158 531 320 8 1 518 50 574 3.72e-122 371
Msa0009190 MtrunA17_Chr4g0059971 35.782 531 324 8 1 518 55 581 2.64e-115 353
Msa0009190 MtrunA17_Chr4g0059991 32.731 553 340 8 1 532 43 584 4.82e-107 332
Msa0009190 MtrunA17_Chr5g0422881 33.586 527 335 9 1 518 41 561 1.40e-102 320
Msa0009190 MtrunA17_Chr7g0255621 33.212 548 338 14 2 531 42 579 2.12e-102 320
Msa0009190 MtrunA17_Chr8g0375311 35.206 534 325 9 1 523 61 584 2.28e-102 320
Msa0009190 MtrunA17_Chr4g0059981 33.333 531 337 11 1 518 52 578 5.84e-102 319
Msa0009190 MtrunA17_Chr8g0362781 33.771 533 333 8 1 518 51 578 1.08e-100 315
Msa0009190 MtrunA17_Chr8g0375321 35.460 533 319 11 1 520 58 578 3.41e-99 311
Msa0009190 MtrunA17_Chr7g0241741 34.286 525 329 8 1 518 43 558 1.47e-98 309
Msa0009190 MtrunA17_Chr8g0375291 34.741 521 323 8 1 512 61 573 2.71e-98 309
Msa0009190 MtrunA17_Chr4g0005901 33.969 524 332 9 1 518 53 568 3.95e-98 308
Msa0009190 MtrunA17_Chr8g0375351 34.270 534 328 10 1 522 61 583 1.46e-97 307
Msa0009190 MtrunA17_Chr7g0255601 34.226 523 324 10 2 512 49 563 1.15e-96 305
Msa0009190 MtrunA17_Chr8g0375341 34.275 531 324 10 1 518 61 579 1.54e-96 304
Msa0009190 MtrunA17_Chr4g0060001 31.354 539 356 8 1 531 50 582 2.35e-95 302
Msa0009190 MtrunA17_Chr8g0375331 34.831 534 327 10 1 523 45 568 3.10e-94 298
Msa0009190 MtrunA17_Chr3g0104011 31.818 528 340 9 1 518 43 560 5.44e-92 292
Msa0009190 MtrunA17_Chr8g0375361 32.197 528 349 5 1 523 60 583 1.19e-89 286
Msa0009190 MtrunA17_Chr3g0112671 31.346 520 333 9 4 518 57 557 1.95e-89 286
Msa0009190 MtrunA17_Chr3g0114501 31.560 545 352 11 1 533 43 578 6.13e-88 282
Msa0009190 MtrunA17_Chr4g0014791 32.821 521 317 7 4 518 53 546 1.16e-87 280
Msa0009190 MtrunA17_Chr7g0255611 31.418 522 331 12 9 514 58 568 2.07e-87 281
Msa0009190 MtrunA17_Chr4g0014781 33.461 523 313 10 4 518 53 548 4.49e-87 279
Msa0009190 MtrunA17_Chr4g0014871 31.862 521 325 7 4 518 54 550 5.25e-86 276
Msa0009190 MtrunA17_Chr7g0240271 29.944 531 351 8 1 518 45 567 9.12e-86 276
Msa0009190 MtrunA17_Chr7g0240281 29.837 553 353 9 1 532 45 583 7.66e-85 274
Msa0009190 MtrunA17_Chr3g0142101 31.911 539 342 10 1 531 56 577 2.55e-84 273
Msa0009190 MtrunA17_Chr4g0014841 33.269 520 314 9 5 518 54 546 6.21e-84 271
Msa0009190 MtrunA17_Chr3g0077151 31.369 526 317 6 2 518 50 540 8.29e-84 270
Msa0009190 MtrunA17_Chr4g0014801 32.443 524 323 8 1 518 50 548 2.38e-83 269
Msa0009190 MtrunA17_Chr8g0362801 32.397 463 296 7 68 518 1 458 4.34e-83 266
Msa0009190 MtrunA17_Chr1g0187241 31.273 534 334 10 1 518 47 563 1.07e-82 268
Msa0009190 MtrunA17_Chr1g0166791 30.930 527 345 9 1 518 45 561 2.12e-81 265
Msa0009190 MtrunA17_Chr7g0240381 28.131 551 360 11 1 533 50 582 2.63e-81 265
Msa0009190 MtrunA17_Chr5g0399061 31.215 535 338 11 1 518 48 569 6.19e-81 263
Msa0009190 MtrunA17_Chr1g0166771 30.784 510 325 11 1 500 12 503 1.74e-80 261
Msa0009190 MtrunA17_Chr3g0112611 32.122 523 341 8 1 518 53 566 7.10e-80 261
Msa0009190 MtrunA17_Chr1g0166711 31.569 529 338 10 1 518 46 561 3.44e-79 259
Msa0009190 MtrunA17_Chr4g0008651 29.502 522 354 8 1 518 55 566 7.49e-78 256
Msa0009190 MtrunA17_Chr1g0166741 30.452 509 328 10 1 500 48 539 3.75e-77 254
Msa0009190 MtrunA17_Chr5g0400371 28.729 543 369 9 1 531 133 669 6.13e-77 255
Msa0009190 MtrunA17_Chr7g0261791 28.519 547 363 10 1 533 50 582 1.57e-76 253
Msa0009190 MtrunA17_Chr7g0261811 27.841 528 360 8 1 518 48 564 5.81e-75 248
Msa0009190 MtrunA17_Chr2g0325951 31.887 530 324 13 1 518 40 544 6.51e-75 247
Msa0009190 MtrunA17_Chr4g0056431 31.311 511 332 9 1 498 46 550 9.92e-75 248
Msa0009190 MtrunA17_Chr5g0415841 30.435 460 295 9 68 512 1 450 2.41e-74 243
Msa0009190 MtrunA17_Chr4g0054891 28.676 544 358 11 1 527 131 661 2.62e-74 248
Msa0009190 MtrunA17_Chr7g0214731 31.776 535 341 9 1 518 82 609 3.76e-74 247
Msa0009190 MtrunA17_Chr7g0261851 29.725 545 358 10 1 533 49 580 1.09e-73 245
Msa0009190 MtrunA17_Chr7g0261881 28.113 530 356 10 1 518 48 564 1.44e-73 244
Msa0009190 MtrunA17_Chr5g0399071 31.002 529 347 11 1 518 46 567 1.51e-73 244
Msa0009190 MtrunA17_Chr7g0261771 28.788 528 355 9 1 518 52 568 5.07e-73 243
Msa0009190 MtrunA17_Chr3g0142091 30.337 534 343 10 2 526 48 561 1.58e-72 241
Msa0009190 MtrunA17_Chr7g0214461 28.913 543 364 8 1 533 99 629 3.53e-71 239
Msa0009190 MtrunA17_Chr2g0326211 32.897 535 312 13 1 518 40 544 1.61e-70 235
Msa0009190 MtrunA17_Chr5g0439381 31.154 520 327 10 5 515 53 550 1.22e-69 234
Msa0009190 MtrunA17_Chr7g0217461 29.273 509 344 10 1 498 45 548 2.04e-69 233
Msa0009190 MtrunA17_Chr2g0325961 31.520 533 323 14 1 518 40 545 2.05e-69 232
Msa0009190 MtrunA17_Chr4g0014861 31.264 451 276 9 76 518 1 425 3.49e-69 228
Msa0009190 MtrunA17_Chr7g0240181 29.306 447 300 6 82 518 16 456 5.62e-68 227
Msa0009190 MtrunA17_Chr7g0240211 29.306 447 300 6 82 518 16 456 5.80e-68 226
Msa0009190 MtrunA17_Chr1g0213711 28.305 537 362 10 1 527 42 565 5.94e-68 229
Msa0009190 MtrunA17_Chr7g0240131 29.083 447 301 6 82 518 16 456 1.69e-67 225
Msa0009190 MtrunA17_Chr7g0235521 28.859 447 302 6 82 518 16 456 7.67e-67 224
Msa0009190 MtrunA17_Chr7g0218851 29.760 541 353 11 1 530 67 591 1.45e-65 223
Msa0009190 MtrunA17_Chr1g0166731 30.901 466 298 10 64 518 6 458 1.73e-65 220
Msa0009190 MtrunA17_Chr2g0284701 27.695 538 364 12 1 518 53 585 2.50e-65 223
Msa0009190 MtrunA17_Chr4g0063591 31.629 528 345 10 1 522 43 560 4.68e-65 221
Msa0009190 MtrunA17_Chr4g0011471 28.571 532 354 12 1 518 37 556 7.55e-65 221
Msa0009190 MtrunA17_Chr2g0276751 28.333 540 358 10 1 532 59 577 7.79e-65 221
Msa0009190 MtrunA17_Chr7g0240151 28.859 447 284 8 82 518 16 438 3.21e-62 211
Msa0009190 MtrunA17_Chr1g0193391 27.458 539 355 16 1 526 35 550 1.52e-61 213
Msa0009190 MtrunA17_Chr8g0353031 28.131 551 344 14 5 533 43 563 2.13e-60 209
Msa0009190 MtrunA17_Chr8g0379991 29.078 564 351 12 1 518 1 561 2.94e-60 208
Msa0009190 MtrunA17_Chr7g0261661 29.158 463 305 10 68 519 1 451 1.50e-59 205
Msa0009190 MtrunA17_Chr4g0011041 26.415 530 362 12 5 518 61 578 1.84e-59 206
Msa0009190 MtrunA17_Chr8g0362711 26.834 518 369 8 9 518 53 568 2.63e-59 206
Msa0009190 MtrunA17_Chr3g0133341 27.767 533 352 13 9 527 43 556 1.80e-58 203
Msa0009190 MtrunA17_Chr7g0271221 27.523 545 356 18 1 530 35 555 1.02e-57 202
Msa0009190 MtrunA17_Chr5g0415961 28.143 533 344 9 9 518 53 569 1.03e-57 202
Msa0009190 MtrunA17_Chr8g0379971 27.757 526 342 13 1 492 41 562 1.84e-57 201
Msa0009190 MtrunA17_Chr1g0147591 43.147 197 101 4 107 297 9 200 7.58e-57 188
Msa0009190 MtrunA17_Chr6g0451841 28.624 545 317 13 5 518 30 533 3.97e-54 191
Msa0009190 MtrunA17_Chr3g0082631 28.184 479 289 13 86 533 18 472 3.68e-53 187
Msa0009190 MtrunA17_Chr7g0261751 26.959 434 275 10 1 395 52 482 6.53e-47 171
Msa0009190 MtrunA17_Chr4g0069581 27.347 490 322 13 41 518 47 514 3.66e-46 170
Msa0009190 MtrunA17_Chr3g0112631 32.130 277 173 4 247 518 3 269 4.17e-43 155
Msa0009190 MtrunA17_Chr7g0234181 27.828 442 281 9 78 518 9 413 1.52e-41 154
Msa0009190 MtrunA17_Chr7g0234151 27.851 456 285 11 67 518 3 418 2.29e-41 154
Msa0009190 MtrunA17_Chr7g0234381 27.193 456 288 10 67 518 3 418 6.25e-41 152
Msa0009190 MtrunA17_Chr3g0142121 32.404 287 179 6 250 531 3 279 7.57e-41 149
Msa0009190 MtrunA17_Chr7g0261731 29.618 314 200 8 1 304 52 354 4.43e-37 140
Msa0009190 MtrunA17_Chr4g0060071 30.556 288 183 7 243 528 32 304 1.06e-35 135
Msa0009190 MtrunA17_Chr3g0142111 29.528 254 173 3 5 252 71 324 3.10e-32 126
Msa0009190 MtrunA17_Chr7g0261721 30.102 196 136 1 323 518 4 198 4.57e-27 109
Msa0009190 MtrunA17_Chr1g0147581 46.154 117 57 2 379 495 6 116 7.86e-23 93.6
Msa0009190 MtrunA17_Chr3g0112651 29.560 159 106 4 67 222 21 176 4.43e-19 85.9
Msa0009190 MtrunA17_Chr8g0382591 40.367 109 60 4 247 352 3 109 1.05e-16 77.0
Msa0009190 MtrunA17_Chr8g0362791 44.286 70 39 0 1 70 57 126 1.23e-14 71.2
Msa0009190 MtrunA17_Chr2g0326221 27.103 214 126 5 305 518 37 220 7.56e-14 71.2
Msa0009190 MtrunA17_Chr7g0261831 30.464 151 90 5 207 352 3 143 9.57e-13 67.8
Msa0009190 MtrunA17_Chr5g0415851 43.077 65 37 0 1 65 13 77 1.91e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009190 AT1G52190.1 48.155 542 270 6 1 532 40 580 2.01e-178 516
Msa0009190 AT3G16180.1 46.111 540 281 6 1 532 42 579 4.63e-170 494
Msa0009190 AT1G69870.1 35.150 532 321 10 1 518 70 591 7.37e-109 338
Msa0009190 AT5G11570.1 38.857 525 242 11 1 522 32 480 2.50e-104 322
Msa0009190 AT1G27080.1 33.210 539 331 11 1 527 33 554 9.99e-102 318
Msa0009190 AT3G54140.1 34.280 528 327 8 1 518 43 560 1.63e-101 317
Msa0009190 AT3G54140.2 34.280 528 327 8 1 518 43 560 1.63e-101 317
Msa0009190 AT1G27080.2 33.270 529 324 11 11 527 1 512 4.67e-100 312
Msa0009190 AT2G02040.1 36.731 520 304 12 1 507 60 567 5.42e-100 314
Msa0009190 AT5G62680.1 32.216 537 345 10 5 527 66 597 3.07e-99 313
Msa0009190 AT1G18880.1 33.013 521 335 8 9 518 46 563 1.67e-98 310
Msa0009190 AT5G01180.2 33.459 529 329 10 1 518 44 560 5.08e-98 308
Msa0009190 AT5G01180.3 33.459 529 329 10 1 518 44 560 5.08e-98 308
Msa0009190 AT5G01180.1 33.459 529 329 10 1 518 44 560 5.08e-98 308
Msa0009190 AT3G47960.1 32.710 535 344 9 5 527 84 614 4.47e-97 308
Msa0009190 AT1G62200.1 35.067 519 309 8 1 507 71 573 1.52e-95 302
Msa0009190 AT1G68570.2 32.642 530 339 8 1 518 12 535 4.44e-94 298
Msa0009190 AT1G68570.1 32.642 530 339 8 1 518 42 565 9.39e-94 298
Msa0009190 AT1G69860.1 34.535 527 319 9 1 518 37 546 2.43e-92 293
Msa0009190 AT5G28470.2 31.066 544 342 13 1 529 36 561 2.96e-91 290
Msa0009190 AT1G62200.2 33.394 548 308 8 1 507 71 602 7.99e-91 291
Msa0009190 AT5G28470.1 30.996 542 343 12 1 529 36 559 8.68e-91 289
Msa0009190 AT1G62200.3 33.394 548 308 8 1 507 85 616 1.59e-90 290
Msa0009190 AT2G02020.1 32.319 526 310 7 1 522 61 544 5.53e-85 273
Msa0009190 AT2G40460.1 30.996 542 345 10 1 532 43 565 1.09e-83 271
Msa0009190 AT3G45660.1 31.657 537 341 10 1 533 40 554 5.38e-82 266
Msa0009190 AT3G45660.3 31.657 537 341 10 1 533 40 554 5.38e-82 266
Msa0009190 AT3G45660.2 31.657 537 341 10 1 533 61 575 6.48e-82 266
Msa0009190 AT5G46050.1 30.196 510 328 8 1 497 46 540 2.74e-78 257
Msa0009190 AT1G22570.2 31.238 509 319 7 2 499 13 501 2.93e-78 255
Msa0009190 AT1G22570.1 31.238 509 319 7 2 499 50 538 5.67e-78 256
Msa0009190 AT1G72125.1 31.238 525 333 9 2 518 49 553 8.73e-78 255
Msa0009190 AT3G54450.1 28.885 547 350 9 2 533 32 554 3.04e-77 253
Msa0009190 AT2G37900.1 30.344 524 338 11 1 516 57 561 4.98e-77 253
Msa0009190 AT3G45720.1 30.315 508 320 11 1 500 38 519 6.56e-77 253
Msa0009190 AT1G72130.1 32.068 527 307 10 2 518 45 530 6.63e-77 252
Msa0009190 AT3G45650.1 30.037 536 351 9 1 533 41 555 1.55e-76 252
Msa0009190 AT5G46040.1 29.842 506 335 7 1 497 46 540 2.57e-76 252
Msa0009190 AT1G72140.1 30.320 531 321 8 2 518 54 549 8.03e-76 249
Msa0009190 AT3G45680.1 30.556 540 340 12 1 531 39 552 1.78e-75 249
Msa0009190 AT1G72120.1 32.443 524 324 9 2 518 49 549 7.27e-75 247
Msa0009190 AT1G22550.1 29.981 527 339 7 2 518 50 556 1.17e-74 247
Msa0009190 AT1G22540.1 30.593 523 334 8 2 518 50 549 3.87e-74 245
Msa0009190 AT2G37900.2 30.832 493 314 11 32 516 9 482 5.94e-74 243
Msa0009190 AT2G02020.2 30.857 525 298 8 1 522 61 523 4.02e-72 239
Msa0009190 AT1G33440.1 30.755 543 348 13 1 533 57 581 4.78e-72 241
Msa0009190 AT5G19640.1 29.644 533 347 12 1 526 78 589 1.49e-71 240
Msa0009190 AT3G45710.1 30.632 506 323 11 1 500 40 523 2.68e-71 238
Msa0009190 AT1G32450.1 27.881 538 368 9 1 524 56 587 3.20e-71 239
Msa0009190 AT3G45650.2 28.648 562 351 10 1 533 41 581 4.95e-71 238
Msa0009190 AT2G26690.2 29.945 541 358 10 1 533 10 537 3.42e-69 232
Msa0009190 AT4G21680.1 28.757 539 360 11 1 524 47 576 5.89e-69 233
Msa0009190 AT2G26690.3 30.168 537 354 10 5 533 2 525 6.27e-69 231
Msa0009190 AT2G26690.1 29.945 541 358 10 1 533 43 570 7.77e-69 232
Msa0009190 AT3G53960.1 28.000 525 361 9 1 518 56 570 8.75e-69 232
Msa0009190 AT3G45700.1 29.205 541 336 13 4 531 38 544 1.13e-68 231
Msa0009190 AT5G13400.1 31.261 547 348 12 1 529 83 619 1.31e-68 232
Msa0009190 AT3G21670.1 30.651 522 330 10 5 515 52 552 1.49e-68 231
Msa0009190 AT1G12110.1 30.263 532 346 12 1 518 46 566 8.96e-66 224
Msa0009190 AT1G59740.1 28.516 519 346 10 9 516 68 572 1.29e-65 224
Msa0009190 AT5G46050.2 30.023 443 282 8 68 497 1 428 1.90e-65 220
Msa0009190 AT1G27040.3 27.810 525 344 10 9 518 22 526 9.36e-65 220
Msa0009190 AT1G27040.1 27.810 525 344 10 9 518 54 558 1.66e-64 220
Msa0009190 AT1G27040.2 27.810 525 344 10 9 518 50 554 2.05e-64 219
Msa0009190 AT3G45690.1 27.955 533 320 12 1 529 37 509 2.96e-64 218
Msa0009190 AT5G14940.1 27.860 542 348 11 5 527 30 547 7.11e-63 215
Msa0009190 AT1G69850.1 28.491 530 354 11 9 518 52 576 1.98e-61 212
Msa0009190 AT3G01350.1 28.442 552 344 18 5 527 30 559 2.98e-59 206
Msa0009190 AT1G72130.2 29.730 444 268 10 85 518 3 412 1.26e-57 198
Msa0009190 AT1G72130.3 29.730 444 268 10 85 518 3 412 1.26e-57 198
Msa0009190 AT3G25260.1 27.148 512 327 12 9 518 48 515 2.28e-48 175
Msa0009190 AT5G62730.2 25.331 529 347 12 9 518 24 523 4.91e-48 175
Msa0009190 AT5G62730.1 25.331 529 347 12 9 518 83 582 1.27e-47 175
Msa0009190 AT3G25280.1 24.658 511 347 8 9 518 48 521 8.86e-42 157
Msa0009190 AT2G38100.2 22.677 538 354 15 10 529 2 495 1.86e-25 110
Msa0009190 AT2G38100.1 22.677 538 354 15 10 529 18 511 2.60e-25 109
Msa0009190 AT2G38100.3 22.677 538 354 15 10 529 24 517 3.36e-25 109

Find 108 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCTGTTATCCAAAT+TGG 0.119037 1_1:+13397047 Msa0009180:intron
CCTAATTGGAATGACCATTT+TGG 0.191021 1_1:-13397606 Msa0009190:CDS
AGTGTAGCATCAACACTTTC+TGG 0.199568 1_1:-13396579 Msa0009190:CDS
GACATTATGATTACTATTAT+TGG 0.208588 1_1:-13396446 Msa0009190:CDS
ACAGCAGCTGCAGTCCTAAT+TGG 0.247406 1_1:-13397620 Msa0009190:CDS
TGTCTTCATGTTCATATCTA+TGG 0.260433 1_1:-13397534 Msa0009190:CDS
ACTAATTTCACACCAATTCT+TGG 0.265044 1_1:-13398388 Msa0009190:CDS
TTTGAGAAAATGGCAAGTTT+TGG 0.270329 1_1:-13398502 None:intergenic
TCGTAGACGGCTACTTTAAT+TGG 0.274233 1_1:-13397655 Msa0009190:CDS
TGATCAAAATCATCCCAATT+TGG 0.299189 1_1:-13397061 Msa0009190:CDS
CCAAAATGGTCATTCCAATT+AGG 0.307226 1_1:+13397606 Msa0009180:intron
ATCATCCCAATTTGGATAAC+AGG 0.307569 1_1:-13397053 Msa0009190:CDS
GGTTTCTAGTAACATAAATA+AGG 0.312579 1_1:-13396469 Msa0009190:CDS
AGGTCAAGTGGAAGGAAATT+AGG 0.313084 1_1:-13396337 Msa0009190:exon
GCATCAACACTTTCTGGATT+AGG 0.321032 1_1:-13396573 Msa0009190:CDS
GAAAAGTTTGGTTGGATTGT+TGG 0.325298 1_1:-13397572 Msa0009190:CDS
TTCTTGAATATATGCCAAAA+TGG 0.329471 1_1:+13397592 Msa0009180:intron
GTTAAATACATAATCATGTT+TGG 0.330586 1_1:+13398472 Msa0009180:intron
CTGCCAAGGCAAATTCTTGA+TGG 0.341231 1_1:-13396672 Msa0009190:CDS
AGAGCCTCCTCTTTAGCCTT+TGG 0.343018 1_1:-13397713 Msa0009190:CDS
TAAGGTTTATGGACCTTGTA+AGG 0.347184 1_1:-13396373 Msa0009190:CDS
AGCTTCTTCATTCTATGTTA+AGG 0.351587 1_1:-13397498 Msa0009190:CDS
AAAATGGGAATTGGATTAAT+CGG 0.355967 1_1:-13396813 Msa0009190:CDS
TCACCAATCACATTGCCTTT+TGG 0.356527 1_1:+13397470 Msa0009180:intron
AGCTTCAGTGGCAACATTCA+TGG 0.356754 1_1:-13396934 Msa0009190:CDS
GCATATATTCAAGAAAAGTT+TGG 0.358899 1_1:-13397584 Msa0009190:CDS
CGCTACCCTACCATCGCCTT+TGG 0.364649 1_1:-13398337 Msa0009190:CDS
TCTTCATTGGCAATTGTAGA+AGG 0.366847 1_1:-13396774 Msa0009190:CDS
TTTCTTGCTGATTCTTACTT+TGG 0.370978 1_1:-13398361 Msa0009190:CDS
TTTGGTTGGATTGTTGGATT+TGG 0.374572 1_1:-13397566 Msa0009190:CDS
TATGTCAATTGGAAATGTTC+TGG 0.375681 1_1:-13396550 Msa0009190:CDS
ATGCCATCATTAATGACATT+TGG 0.386226 1_1:+13397392 Msa0009180:intron
GGTTATGAAGTTCTTCATCT+TGG 0.387993 1_1:+13397129 Msa0009180:intron
TCATTCCTGTTATCCAAATT+GGG 0.388133 1_1:+13397048 Msa0009180:intron
CAAAGTAATGTGGCGGTTCA+TGG 0.393063 1_1:+13396974 Msa0009180:intron
GCAAGAAAAGCACCAAGAAT+TGG 0.393621 1_1:+13398376 Msa0009180:intron
ATGTTTATCAACATCTTCAT+TGG 0.394224 1_1:-13396787 Msa0009190:CDS
ATGTATTTAACAAGACATTA+CGG 0.396983 1_1:-13398460 Msa0009190:CDS
TTATTCCAAGTGATAAATTC+AGG 0.412719 1_1:-13397340 Msa0009190:intron
TCTGGATTAGGTATGTCAAT+TGG 0.439337 1_1:-13396561 Msa0009190:CDS
CTCCTCTTTAGCCTTTGGTA+TGG 0.442303 1_1:-13397708 Msa0009190:CDS
TGTATTTAACAAGACATTAC+GGG 0.442650 1_1:-13398459 Msa0009190:CDS
AGGGTGAGGGAAAGGAAAGT+TGG 0.446026 1_1:-13396491 Msa0009190:CDS
GTTTCTAGTAACATAAATAA+GGG 0.447049 1_1:-13396468 Msa0009190:CDS
CTATTGTGCAAAGGCTCCAT+TGG 0.459338 1_1:+13397108 Msa0009180:intron
ACTTTCCTTTCCCTCACCCT+TGG 0.461540 1_1:+13396494 Msa0009180:intron
GATATGAACATGAAGACAAC+AGG 0.477668 1_1:+13397539 Msa0009180:intron
GAGTTGCAGCTCATAGTGAT+AGG 0.483801 1_1:+13397806 Msa0009180:intron
AGTGGAAGGAAATTAGGAAT+AGG 0.487384 1_1:-13396331 Msa0009190:exon
TCTCTATGCGTAATCTCCAT+TGG 0.488238 1_1:-13397749 Msa0009190:CDS
AGAAAATTAGCAATTGATGA+AGG 0.490657 1_1:-13396744 Msa0009190:CDS
CTACCAATGTGATCCTCCTC+TGG 0.502585 1_1:-13398420 Msa0009190:CDS
TCACCAAATGTCATTAATGA+TGG 0.503748 1_1:-13397395 Msa0009190:CDS
TGCGTAATCTCCATTGGAGT+TGG 0.515221 1_1:-13397743 Msa0009190:CDS
GGGTGAGGGAAAGGAAAGTT+GGG 0.522858 1_1:-13396490 Msa0009190:CDS
TGTTACCAAGGGTGAGGGAA+AGG 0.524547 1_1:-13396499 Msa0009190:CDS
GAGATCCAAAGGCGATGGTA+GGG 0.526910 1_1:+13398332 Msa0009180:intron
GTCCATACCAAAGGCTAAAG+AGG 0.528139 1_1:+13397706 Msa0009180:intron
GGATCACAAGGACTTAGGCT+TGG 0.530358 1_1:+13397827 Msa0009180:intron
TATGTTAAGGTGGAACCAAA+AGG 0.532360 1_1:-13397485 Msa0009190:CDS
TGATAATGTTACCAAGGGTG+AGG 0.533883 1_1:-13396505 Msa0009190:CDS
ATATTCAAGAAAAGTTTGGT+TGG 0.534951 1_1:-13397580 Msa0009190:CDS
GAAAATGAAGGTCAAGTGGA+AGG 0.535212 1_1:-13396345 Msa0009190:CDS
AGAAGAAAATGAAGGTCAAG+TGG 0.536273 1_1:-13396349 Msa0009190:CDS
ATGAAGAACTTCATAACCAA+TGG 0.538189 1_1:-13397124 Msa0009190:CDS
AAGGTTTATGGACCTTGTAA+GGG 0.541095 1_1:-13396372 Msa0009190:CDS
CAAAATCCCCGCAGCTTCAG+TGG 0.541730 1_1:-13396946 Msa0009190:CDS
GAACCAAAAGGCAATGTGAT+TGG 0.544905 1_1:-13397473 Msa0009190:CDS
TGATAGGATCACAAGGACTT+AGG 0.546128 1_1:+13397822 Msa0009180:intron
CTACTTGATCTATTGTGCAA+AGG 0.552647 1_1:+13397099 Msa0009180:intron
AAACCATCAAGAATTTGCCT+TGG 0.555924 1_1:+13396669 Msa0009180:intron
AGAGATCCAAAGGCGATGGT+AGG 0.556974 1_1:+13398331 Msa0009180:intron
GAATGCAAGCTGTGATGTTG+TGG 0.561705 1_1:+13397781 Msa0009180:intron
GACATGTTCACAACACCTTG+TGG 0.562079 1_1:+13396708 Msa0009180:intron
AATGTTGCCACTGAAGCTGC+GGG 0.563608 1_1:+13396939 Msa0009180:intron
CAGTTATGTGGCTACTGCCA+AGG 0.564910 1_1:-13396686 Msa0009190:CDS
GTTTAGTTGGTCCATACCAA+AGG 0.566003 1_1:+13397697 Msa0009180:intron
TGATACCTGAATTTATCACT+TGG 0.575875 1_1:+13397335 Msa0009180:intron
TCATTAATGACATTTGGTGA+TGG 0.576041 1_1:+13397398 Msa0009180:intron
TTCTTCATTCTATGTTAAGG+TGG 0.584289 1_1:-13397495 Msa0009190:CDS
GTAATCTCCATTGGAGTTGG+TGG 0.588087 1_1:-13397740 Msa0009190:CDS
TCTTGGTTGAGATCTTGTTG+TGG 0.591932 1_1:+13397146 Msa0009180:intron
GATAATGTTACCAAGGGTGA+GGG 0.592854 1_1:-13396504 Msa0009190:CDS
TGTAAGGGAGAAGAAAATGA+AGG 0.596482 1_1:-13396357 Msa0009190:CDS
ATGTATATTAATATGAGTCA+AGG 0.598246 1_1:-13397023 Msa0009190:CDS
CTCATAGTGATAGGATCACA+AGG 0.599488 1_1:+13397815 Msa0009180:intron
TAAATTGAGAAGAGATCCAA+AGG 0.600284 1_1:+13398321 Msa0009180:intron
TAGTAGCTGCTGACCAGAGG+AGG 0.603482 1_1:+13398407 Msa0009180:intron
AAAGATGCAGGAATCGTAGA+CGG 0.609930 1_1:-13397668 Msa0009190:CDS
GAATGTTGCCACTGAAGCTG+CGG 0.610682 1_1:+13396938 Msa0009180:intron
AATGCAAGCTGTGATGTTGT+GGG 0.611461 1_1:+13397782 Msa0009180:intron
GAGAAGAGATCCAAAGGCGA+TGG 0.612653 1_1:+13398327 Msa0009180:intron
TTGTGAACATGTCAGTTATG+TGG 0.615976 1_1:-13396698 Msa0009190:CDS
TCTTACACCACCAACTCCAA+TGG 0.618858 1_1:+13397733 Msa0009180:intron
GGATTATAACACAATCATAG+AGG 0.624104 1_1:+13396886 Msa0009180:intron
GCTACACTAGACATAGATTG+AGG 0.625082 1_1:+13396594 Msa0009180:intron
TGGTATGGACCAACTAAACA+AGG 0.632449 1_1:-13397693 Msa0009190:CDS
TGAAGTTCAAAGTAATGTGG+CGG 0.637204 1_1:+13396967 Msa0009180:intron
AATTAGTAGCTGCTGACCAG+AGG 0.640208 1_1:+13398404 Msa0009180:intron
GTTGTTGATAATGTTACCAA+GGG 0.644996 1_1:-13396510 Msa0009190:CDS
TGACCAGAGGAGGATCACAT+TGG 0.645236 1_1:+13398417 Msa0009180:intron
GGCTTTATAGAATTTCCACA+AGG 0.665207 1_1:-13396723 Msa0009190:CDS
TGTTGTTGATAATGTTACCA+AGG 0.672043 1_1:-13396511 Msa0009190:CDS
CATACCAAAGGCTAAAGAGG+AGG 0.672525 1_1:+13397709 Msa0009180:intron
TTTAACAAGACATTACGGGA+TGG 0.675121 1_1:-13398455 Msa0009190:CDS
AGTAATGTGGCGGTTCATGG+AGG 0.708221 1_1:+13396977 Msa0009180:intron
TGGCATGTACTTCTGTGACA+AGG 0.738759 1_1:-13397375 Msa0009190:CDS
ATGTTGCCACTGAAGCTGCG+GGG 0.808752 1_1:+13396940 Msa0009180:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATACTATAAATAATTA+AGG + chr1_1:13396656-13396675 Msa0009180:intron 10.0%
!!! ATTCTTTGTTTATTTATTTA+TGG - chr1_1:13396670-13396689 Msa0009190:CDS 10.0%
!! AAGAATACTATAAATAATTA+AGG + chr1_1:13396656-13396675 Msa0009180:intron 10.0%
!!! ATTCTTTGTTTATTTATTTA+TGG - chr1_1:13396670-13396689 Msa0009190:CDS 10.0%
!! TGTTTATTTATTTATGGATA+TGG - chr1_1:13396676-13396695 Msa0009190:CDS 15.0%
!! ATTAAGAGTAAAACAAAAAA+TGG - chr1_1:13397962-13397981 Msa0009190:intron 15.0%
!! TTAAGAGTAAAACAAAAAAT+GGG - chr1_1:13397963-13397982 Msa0009190:intron 15.0%
!! TGTTTATTTATTTATGGATA+TGG - chr1_1:13396676-13396695 Msa0009190:CDS 15.0%
!! ATTAAGAGTAAAACAAAAAA+TGG - chr1_1:13397962-13397981 Msa0009190:intron 15.0%
!! TTAAGAGTAAAACAAAAAAT+GGG - chr1_1:13397963-13397982 Msa0009190:intron 15.0%
!! GTTAAATACATAATCATGTT+TGG + chr1_1:13396322-13396341 Msa0009180:intron 20.0%
!! ATGTATTTAACAAGACATTA+CGG - chr1_1:13396331-13396350 Msa0009190:exon 20.0%
!! GCTATTATTAAGATTAGATA+CGG - chr1_1:13396507-13396526 Msa0009190:CDS 20.0%
!!! ATTTTTCTATTCTAAAGGTA+GGG + chr1_1:13396705-13396724 Msa0009180:intron 20.0%
!!! TATTTTTCTATTCTAAAGGT+AGG + chr1_1:13396706-13396725 Msa0009180:intron 20.0%
!!! TGCATATTTTTCTATTCTAA+AGG + chr1_1:13396710-13396729 Msa0009180:intron 20.0%
!! ACATGAAAATGTTATTATAG+CGG + chr1_1:13396850-13396869 Msa0009180:intron 20.0%
!! TTCATGTTGTATATTTATCT+TGG - chr1_1:13396863-13396882 Msa0009190:CDS 20.0%
!! ATGTATATTAATATGAGTCA+AGG - chr1_1:13397768-13397787 Msa0009190:CDS 20.0%
!!! GTTTCTAGTAACATAAATAA+GGG - chr1_1:13398323-13398342 Msa0009190:CDS 20.0%
!! GACATTATGATTACTATTAT+TGG - chr1_1:13398345-13398364 Msa0009190:CDS 20.0%
!! GTTAAATACATAATCATGTT+TGG + chr1_1:13396322-13396341 Msa0009180:intron 20.0%
!! ATGTATTTAACAAGACATTA+CGG - chr1_1:13396331-13396350 Msa0009190:exon 20.0%
!! GCTATTATTAAGATTAGATA+CGG - chr1_1:13396507-13396526 Msa0009190:CDS 20.0%
!!! ATTTTTCTATTCTAAAGGTA+GGG + chr1_1:13396705-13396724 Msa0009180:intron 20.0%
!!! TATTTTTCTATTCTAAAGGT+AGG + chr1_1:13396706-13396725 Msa0009180:intron 20.0%
!!! TGCATATTTTTCTATTCTAA+AGG + chr1_1:13396710-13396729 Msa0009180:intron 20.0%
!! ACATGAAAATGTTATTATAG+CGG + chr1_1:13396850-13396869 Msa0009180:intron 20.0%
!! TTCATGTTGTATATTTATCT+TGG - chr1_1:13396863-13396882 Msa0009190:CDS 20.0%
!! ATGTATATTAATATGAGTCA+AGG - chr1_1:13397768-13397787 Msa0009190:CDS 20.0%
!!! GTTTCTAGTAACATAAATAA+GGG - chr1_1:13398323-13398342 Msa0009190:CDS 20.0%
!! GACATTATGATTACTATTAT+TGG - chr1_1:13398345-13398364 Msa0009190:CDS 20.0%
! TGTATTTAACAAGACATTAC+GGG - chr1_1:13396332-13396351 Msa0009190:exon 25.0%
! AGTAACACATTTATTGATCT+TGG + chr1_1:13396810-13396829 Msa0009180:intron 25.0%
!!! AAATGTTATTATAGCGGATT+TGG + chr1_1:13396844-13396863 Msa0009180:intron 25.0%
! TTCTTGAATATATGCCAAAA+TGG + chr1_1:13397202-13397221 Msa0009180:intron 25.0%
! GCATATATTCAAGAAAAGTT+TGG - chr1_1:13397207-13397226 Msa0009190:intron 25.0%
! ATATTCAAGAAAAGTTTGGT+TGG - chr1_1:13397211-13397230 Msa0009190:intron 25.0%
! TTATTCCAAGTGATAAATTC+AGG - chr1_1:13397451-13397470 Msa0009190:CDS 25.0%
! TCTTATGTGATTTGATTGAA+AGG - chr1_1:13397592-13397611 Msa0009190:CDS 25.0%
!!! CTTGTTGTGGATTTTTTATA+AGG + chr1_1:13397635-13397654 Msa0009180:intron 25.0%
!!! TTTTGAAGTTCAAAGTAATG+TGG + chr1_1:13397830-13397849 Msa0009180:intron 25.0%
! GTAAAACAAAAAATGGGAAT+TGG - chr1_1:13397969-13397988 Msa0009190:intron 25.0%
! AAAATGGGAATTGGATTAAT+CGG - chr1_1:13397978-13397997 Msa0009190:intron 25.0%
! ATGTTTATCAACATCTTCAT+TGG - chr1_1:13398004-13398023 Msa0009190:intron 25.0%
! AGAAAATTAGCAATTGATGA+AGG - chr1_1:13398047-13398066 Msa0009190:intron 25.0%
!!! GGTTTCTAGTAACATAAATA+AGG - chr1_1:13398322-13398341 Msa0009190:CDS 25.0%
!!! TACTATTATTGGCTTCTTTT+TGG - chr1_1:13398356-13398375 Msa0009190:CDS 25.0%
! ACAAAGAAAACCCAAAAAAT+TGG + chr1_1:13398393-13398412 Msa0009180:intron 25.0%
!!! CTTTGTTTTAGTAAGGTTTA+TGG - chr1_1:13398407-13398426 Msa0009190:CDS 25.0%
! TGTATTTAACAAGACATTAC+GGG - chr1_1:13396332-13396351 Msa0009190:exon 25.0%
! AGTAACACATTTATTGATCT+TGG + chr1_1:13396810-13396829 Msa0009180:intron 25.0%
!!! AAATGTTATTATAGCGGATT+TGG + chr1_1:13396844-13396863 Msa0009180:intron 25.0%
! TTCTTGAATATATGCCAAAA+TGG + chr1_1:13397202-13397221 Msa0009180:intron 25.0%
! GCATATATTCAAGAAAAGTT+TGG - chr1_1:13397207-13397226 Msa0009190:intron 25.0%
! ATATTCAAGAAAAGTTTGGT+TGG - chr1_1:13397211-13397230 Msa0009190:intron 25.0%
! TTATTCCAAGTGATAAATTC+AGG - chr1_1:13397451-13397470 Msa0009190:CDS 25.0%
! TCTTATGTGATTTGATTGAA+AGG - chr1_1:13397592-13397611 Msa0009190:CDS 25.0%
!!! CTTGTTGTGGATTTTTTATA+AGG + chr1_1:13397635-13397654 Msa0009180:intron 25.0%
!!! TTTTGAAGTTCAAAGTAATG+TGG + chr1_1:13397830-13397849 Msa0009180:intron 25.0%
! GTAAAACAAAAAATGGGAAT+TGG - chr1_1:13397969-13397988 Msa0009190:intron 25.0%
! AAAATGGGAATTGGATTAAT+CGG - chr1_1:13397978-13397997 Msa0009190:intron 25.0%
! ATGTTTATCAACATCTTCAT+TGG - chr1_1:13398004-13398023 Msa0009190:intron 25.0%
! AGAAAATTAGCAATTGATGA+AGG - chr1_1:13398047-13398066 Msa0009190:intron 25.0%
!!! GGTTTCTAGTAACATAAATA+AGG - chr1_1:13398322-13398341 Msa0009190:CDS 25.0%
!!! TACTATTATTGGCTTCTTTT+TGG - chr1_1:13398356-13398375 Msa0009190:CDS 25.0%
! ACAAAGAAAACCCAAAAAAT+TGG + chr1_1:13398393-13398412 Msa0009180:intron 25.0%
!!! CTTTGTTTTAGTAAGGTTTA+TGG - chr1_1:13398407-13398426 Msa0009190:CDS 25.0%
ACTAATTTCACACCAATTCT+TGG - chr1_1:13396403-13396422 Msa0009190:CDS 30.0%
!! TTTCTTGCTGATTCTTACTT+TGG - chr1_1:13396430-13396449 Msa0009190:CDS 30.0%
TAAATTGAGAAGAGATCCAA+AGG + chr1_1:13396473-13396492 Msa0009180:intron 30.0%
!! ACCATTGATTTGATATCAGA+CGG - chr1_1:13396741-13396760 Msa0009190:CDS 30.0%
GTCATTCGATTTCAAATCAA+CGG + chr1_1:13396788-13396807 Msa0009180:intron 30.0%
ATTATTATGCGTCACACTAT+AGG - chr1_1:13396909-13396928 Msa0009190:CDS 30.0%
TTATTATGCGTCACACTATA+GGG - chr1_1:13396910-13396929 Msa0009190:CDS 30.0%
!!! TATAGGGAATGCTACTTTTT+TGG - chr1_1:13396926-13396945 Msa0009190:CDS 30.0%
!! CATCTTTTTCCTTGTTTAGT+TGG + chr1_1:13397110-13397129 Msa0009180:intron 30.0%
TGTCTTCATGTTCATATCTA+TGG - chr1_1:13397257-13397276 Msa0009190:intron 30.0%
AGCTTCTTCATTCTATGTTA+AGG - chr1_1:13397293-13397312 Msa0009190:intron 30.0%
TTCTTCATTCTATGTTAAGG+TGG - chr1_1:13397296-13397315 Msa0009190:intron 30.0%
! TCATTAATGACATTTGGTGA+TGG + chr1_1:13397396-13397415 Msa0009180:intron 30.0%
TCACCAAATGTCATTAATGA+TGG - chr1_1:13397396-13397415 Msa0009190:CDS 30.0%
ATGCCATCATTAATGACATT+TGG + chr1_1:13397402-13397421 Msa0009180:intron 30.0%
TGATACCTGAATTTATCACT+TGG + chr1_1:13397459-13397478 Msa0009180:intron 30.0%
! TTGCAAAGCACTCTAAAAAT+AGG + chr1_1:13397558-13397577 Msa0009180:intron 30.0%
ATCAAATCACATAAGAAAGC+CGG + chr1_1:13397588-13397607 Msa0009180:intron 30.0%
ATGAAGAACTTCATAACCAA+TGG - chr1_1:13397667-13397686 Msa0009190:CDS 30.0%
TGATCAAAATCATCCCAATT+TGG - chr1_1:13397730-13397749 Msa0009190:CDS 30.0%
TCATTCCTGTTATCCAAATT+GGG + chr1_1:13397746-13397765 Msa0009180:intron 30.0%
ATCATTCCTGTTATCCAAAT+TGG + chr1_1:13397747-13397766 Msa0009180:intron 30.0%
! TGGTTCTTTTTACAGTACTA+TGG - chr1_1:13397877-13397896 Msa0009190:intron 30.0%
GGATTATAACACAATCATAG+AGG + chr1_1:13397908-13397927 Msa0009180:intron 30.0%
! TGTTTTACTCTTAATCGAGT+CGG + chr1_1:13397957-13397976 Msa0009180:intron 30.0%
TATGTCAATTGGAAATGTTC+TGG - chr1_1:13398241-13398260 Msa0009190:intron 30.0%
!! TGTTGTTGATAATGTTACCA+AGG - chr1_1:13398280-13398299 Msa0009190:intron 30.0%
!! GTTGTTGATAATGTTACCAA+GGG - chr1_1:13398281-13398300 Msa0009190:intron 30.0%
!!! ATTGATGTTGGCCAATTTTT+TGG - chr1_1:13398379-13398398 Msa0009190:CDS 30.0%
!!! TTGATGTTGGCCAATTTTTT+GGG - chr1_1:13398380-13398399 Msa0009190:CDS 30.0%
!!! GGGTTTTCTTTGTTTTAGTA+AGG - chr1_1:13398400-13398419 Msa0009190:CDS 30.0%
ACTAATTTCACACCAATTCT+TGG - chr1_1:13396403-13396422 Msa0009190:CDS 30.0%
!! TTTCTTGCTGATTCTTACTT+TGG - chr1_1:13396430-13396449 Msa0009190:CDS 30.0%
TAAATTGAGAAGAGATCCAA+AGG + chr1_1:13396473-13396492 Msa0009180:intron 30.0%
!! ACCATTGATTTGATATCAGA+CGG - chr1_1:13396741-13396760 Msa0009190:CDS 30.0%
GTCATTCGATTTCAAATCAA+CGG + chr1_1:13396788-13396807 Msa0009180:intron 30.0%
ATTATTATGCGTCACACTAT+AGG - chr1_1:13396909-13396928 Msa0009190:CDS 30.0%
TTATTATGCGTCACACTATA+GGG - chr1_1:13396910-13396929 Msa0009190:CDS 30.0%
!!! TATAGGGAATGCTACTTTTT+TGG - chr1_1:13396926-13396945 Msa0009190:CDS 30.0%
!! CATCTTTTTCCTTGTTTAGT+TGG + chr1_1:13397110-13397129 Msa0009180:intron 30.0%
TGTCTTCATGTTCATATCTA+TGG - chr1_1:13397257-13397276 Msa0009190:intron 30.0%
AGCTTCTTCATTCTATGTTA+AGG - chr1_1:13397293-13397312 Msa0009190:intron 30.0%
TTCTTCATTCTATGTTAAGG+TGG - chr1_1:13397296-13397315 Msa0009190:intron 30.0%
! TCATTAATGACATTTGGTGA+TGG + chr1_1:13397396-13397415 Msa0009180:intron 30.0%
TCACCAAATGTCATTAATGA+TGG - chr1_1:13397396-13397415 Msa0009190:CDS 30.0%
ATGCCATCATTAATGACATT+TGG + chr1_1:13397402-13397421 Msa0009180:intron 30.0%
TGATACCTGAATTTATCACT+TGG + chr1_1:13397459-13397478 Msa0009180:intron 30.0%
! TTGCAAAGCACTCTAAAAAT+AGG + chr1_1:13397558-13397577 Msa0009180:intron 30.0%
ATCAAATCACATAAGAAAGC+CGG + chr1_1:13397588-13397607 Msa0009180:intron 30.0%
ATGAAGAACTTCATAACCAA+TGG - chr1_1:13397667-13397686 Msa0009190:CDS 30.0%
TGATCAAAATCATCCCAATT+TGG - chr1_1:13397730-13397749 Msa0009190:CDS 30.0%
TCATTCCTGTTATCCAAATT+GGG + chr1_1:13397746-13397765 Msa0009180:intron 30.0%
ATCATTCCTGTTATCCAAAT+TGG + chr1_1:13397747-13397766 Msa0009180:intron 30.0%
! TGGTTCTTTTTACAGTACTA+TGG - chr1_1:13397877-13397896 Msa0009190:intron 30.0%
GGATTATAACACAATCATAG+AGG + chr1_1:13397908-13397927 Msa0009180:intron 30.0%
! TGTTTTACTCTTAATCGAGT+CGG + chr1_1:13397957-13397976 Msa0009180:intron 30.0%
TATGTCAATTGGAAATGTTC+TGG - chr1_1:13398241-13398260 Msa0009190:intron 30.0%
!! TGTTGTTGATAATGTTACCA+AGG - chr1_1:13398280-13398299 Msa0009190:intron 30.0%
!! GTTGTTGATAATGTTACCAA+GGG - chr1_1:13398281-13398300 Msa0009190:intron 30.0%
!!! ATTGATGTTGGCCAATTTTT+TGG - chr1_1:13398379-13398398 Msa0009190:CDS 30.0%
!!! TTGATGTTGGCCAATTTTTT+GGG - chr1_1:13398380-13398399 Msa0009190:CDS 30.0%
!!! GGGTTTTCTTTGTTTTAGTA+AGG - chr1_1:13398400-13398419 Msa0009190:CDS 30.0%
TTTAACAAGACATTACGGGA+TGG - chr1_1:13396336-13396355 Msa0009190:exon 35.0%
GACAATGTGTGTATAACTAG+TGG - chr1_1:13396533-13396552 Msa0009190:CDS 35.0%
ATAGTCCTCACCTTATAAAC+CGG - chr1_1:13396556-13396575 Msa0009190:CDS 35.0%
ACCGTCTGATATCAAATCAA+TGG + chr1_1:13396745-13396764 Msa0009180:intron 35.0%
ATTCGATTTCAAATCAACGG+TGG + chr1_1:13396785-13396804 Msa0009180:intron 35.0%
CTAAACAAGGAAAAAGATGC+AGG - chr1_1:13397111-13397130 Msa0009190:CDS 35.0%
CCAAAATGGTCATTCCAATT+AGG + chr1_1:13397188-13397207 Msa0009180:intron 35.0%
! CCTAATTGGAATGACCATTT+TGG - chr1_1:13397185-13397204 Msa0009190:intron 35.0%
GAAAAGTTTGGTTGGATTGT+TGG - chr1_1:13397219-13397238 Msa0009190:intron 35.0%
TTTGGTTGGATTGTTGGATT+TGG - chr1_1:13397225-13397244 Msa0009190:intron 35.0%
GATATGAACATGAAGACAAC+AGG + chr1_1:13397255-13397274 Msa0009180:intron 35.0%
TATGTTAAGGTGGAACCAAA+AGG - chr1_1:13397306-13397325 Msa0009190:intron 35.0%
TACAACAATGTGCACTTGAA+TGG + chr1_1:13397492-13397511 Msa0009180:intron 35.0%
GGTTATGAAGTTCTTCATCT+TGG + chr1_1:13397665-13397684 Msa0009180:intron 35.0%
CTACTTGATCTATTGTGCAA+AGG + chr1_1:13397695-13397714 Msa0009180:intron 35.0%
ATCATCCCAATTTGGATAAC+AGG - chr1_1:13397738-13397757 Msa0009190:CDS 35.0%
TGAAGTTCAAAGTAATGTGG+CGG + chr1_1:13397827-13397846 Msa0009180:intron 35.0%
!!! GTCTTAGTTTTGATGCTGAA+GGG + chr1_1:13397929-13397948 Msa0009180:intron 35.0%
TCTTCATTGGCAATTGTAGA+AGG - chr1_1:13398017-13398036 Msa0009190:intron 35.0%
! GGCTTTATAGAATTTCCACA+AGG - chr1_1:13398068-13398087 Msa0009190:intron 35.0%
TTGTGAACATGTCAGTTATG+TGG - chr1_1:13398093-13398112 Msa0009190:intron 35.0%
AAACCATCAAGAATTTGCCT+TGG + chr1_1:13398125-13398144 Msa0009180:intron 35.0%
! GGTTTTGCTGAAGCTTTTAA+TGG - chr1_1:13398140-13398159 Msa0009190:intron 35.0%
! TCTGGATTAGGTATGTCAAT+TGG - chr1_1:13398230-13398249 Msa0009190:intron 35.0%
! GCTTCTTTTTGGATTGATGT+TGG - chr1_1:13398367-13398386 Msa0009190:CDS 35.0%
TAAGGTTTATGGACCTTGTA+AGG - chr1_1:13398418-13398437 Msa0009190:CDS 35.0%
AAGGTTTATGGACCTTGTAA+GGG - chr1_1:13398419-13398438 Msa0009190:CDS 35.0%
! TCATTTTCTTCTCCCTTACA+AGG + chr1_1:13398434-13398453 Msa0009180:intron 35.0%
TGTAAGGGAGAAGAAAATGA+AGG - chr1_1:13398434-13398453 Msa0009190:CDS 35.0%
AGAAGAAAATGAAGGTCAAG+TGG - chr1_1:13398442-13398461 Msa0009190:CDS 35.0%
AGTGGAAGGAAATTAGGAAT+AGG - chr1_1:13398460-13398479 Msa0009190:CDS 35.0%
TTTAACAAGACATTACGGGA+TGG - chr1_1:13396336-13396355 Msa0009190:exon 35.0%
GACAATGTGTGTATAACTAG+TGG - chr1_1:13396533-13396552 Msa0009190:CDS 35.0%
ATAGTCCTCACCTTATAAAC+CGG - chr1_1:13396556-13396575 Msa0009190:CDS 35.0%
ACCGTCTGATATCAAATCAA+TGG + chr1_1:13396745-13396764 Msa0009180:intron 35.0%
ATTCGATTTCAAATCAACGG+TGG + chr1_1:13396785-13396804 Msa0009180:intron 35.0%
CTAAACAAGGAAAAAGATGC+AGG - chr1_1:13397111-13397130 Msa0009190:CDS 35.0%
CCAAAATGGTCATTCCAATT+AGG + chr1_1:13397188-13397207 Msa0009180:intron 35.0%
! CCTAATTGGAATGACCATTT+TGG - chr1_1:13397185-13397204 Msa0009190:intron 35.0%
GAAAAGTTTGGTTGGATTGT+TGG - chr1_1:13397219-13397238 Msa0009190:intron 35.0%
TTTGGTTGGATTGTTGGATT+TGG - chr1_1:13397225-13397244 Msa0009190:intron 35.0%
GATATGAACATGAAGACAAC+AGG + chr1_1:13397255-13397274 Msa0009180:intron 35.0%
TATGTTAAGGTGGAACCAAA+AGG - chr1_1:13397306-13397325 Msa0009190:intron 35.0%
TACAACAATGTGCACTTGAA+TGG + chr1_1:13397492-13397511 Msa0009180:intron 35.0%
GGTTATGAAGTTCTTCATCT+TGG + chr1_1:13397665-13397684 Msa0009180:intron 35.0%
CTACTTGATCTATTGTGCAA+AGG + chr1_1:13397695-13397714 Msa0009180:intron 35.0%
ATCATCCCAATTTGGATAAC+AGG - chr1_1:13397738-13397757 Msa0009190:CDS 35.0%
TGAAGTTCAAAGTAATGTGG+CGG + chr1_1:13397827-13397846 Msa0009180:intron 35.0%
!!! GTCTTAGTTTTGATGCTGAA+GGG + chr1_1:13397929-13397948 Msa0009180:intron 35.0%
TCTTCATTGGCAATTGTAGA+AGG - chr1_1:13398017-13398036 Msa0009190:intron 35.0%
! GGCTTTATAGAATTTCCACA+AGG - chr1_1:13398068-13398087 Msa0009190:intron 35.0%
TTGTGAACATGTCAGTTATG+TGG - chr1_1:13398093-13398112 Msa0009190:intron 35.0%
AAACCATCAAGAATTTGCCT+TGG + chr1_1:13398125-13398144 Msa0009180:intron 35.0%
! GGTTTTGCTGAAGCTTTTAA+TGG - chr1_1:13398140-13398159 Msa0009190:intron 35.0%
! TCTGGATTAGGTATGTCAAT+TGG - chr1_1:13398230-13398249 Msa0009190:intron 35.0%
! GCTTCTTTTTGGATTGATGT+TGG - chr1_1:13398367-13398386 Msa0009190:CDS 35.0%
TAAGGTTTATGGACCTTGTA+AGG - chr1_1:13398418-13398437 Msa0009190:CDS 35.0%
AAGGTTTATGGACCTTGTAA+GGG - chr1_1:13398419-13398438 Msa0009190:CDS 35.0%
! TCATTTTCTTCTCCCTTACA+AGG + chr1_1:13398434-13398453 Msa0009180:intron 35.0%
TGTAAGGGAGAAGAAAATGA+AGG - chr1_1:13398434-13398453 Msa0009190:CDS 35.0%
AGAAGAAAATGAAGGTCAAG+TGG - chr1_1:13398442-13398461 Msa0009190:CDS 35.0%
AGTGGAAGGAAATTAGGAAT+AGG - chr1_1:13398460-13398479 Msa0009190:CDS 35.0%
!! GCAAGAAAAGCACCAAGAAT+TGG + chr1_1:13396418-13396437 Msa0009180:intron 40.0%
! TGCAAATCAGCCGGTTTATA+AGG + chr1_1:13396569-13396588 Msa0009180:intron 40.0%
ACTCAACTATGCAAATCAGC+CGG + chr1_1:13396578-13396597 Msa0009180:intron 40.0%
TGATAGGATCACAAGGACTT+AGG + chr1_1:13396972-13396991 Msa0009180:intron 40.0%
CTCATAGTGATAGGATCACA+AGG + chr1_1:13396979-13396998 Msa0009180:intron 40.0%
AATGCAAGCTGTGATGTTGT+GGG + chr1_1:13397012-13397031 Msa0009180:intron 40.0%
TCTCTATGCGTAATCTCCAT+TGG - chr1_1:13397042-13397061 Msa0009190:CDS 40.0%
GTTTAGTTGGTCCATACCAA+AGG + chr1_1:13397097-13397116 Msa0009180:intron 40.0%
TGGTATGGACCAACTAAACA+AGG - chr1_1:13397098-13397117 Msa0009190:CDS 40.0%
AAAGATGCAGGAATCGTAGA+CGG - chr1_1:13397123-13397142 Msa0009190:CDS 40.0%
! TCGTAGACGGCTACTTTAAT+TGG - chr1_1:13397136-13397155 Msa0009190:CDS 40.0%
GAACCAAAAGGCAATGTGAT+TGG - chr1_1:13397318-13397337 Msa0009190:intron 40.0%
! TCACCAATCACATTGCCTTT+TGG + chr1_1:13397324-13397343 Msa0009180:intron 40.0%
AGTGCTTTGCAATCACTAAC+CGG - chr1_1:13397566-13397585 Msa0009190:CDS 40.0%
TCTTGGTTGAGATCTTGTTG+TGG + chr1_1:13397648-13397667 Msa0009180:intron 40.0%
!!! CGTCTTAGTTTTGATGCTGA+AGG + chr1_1:13397930-13397949 Msa0009180:intron 40.0%
! GCTGAAGCTTTTAATGGTGT+TGG - chr1_1:13398146-13398165 Msa0009190:intron 40.0%
GCTACACTAGACATAGATTG+AGG + chr1_1:13398200-13398219 Msa0009180:intron 40.0%
AGTGTAGCATCAACACTTTC+TGG - chr1_1:13398212-13398231 Msa0009190:intron 40.0%
GCATCAACACTTTCTGGATT+AGG - chr1_1:13398218-13398237 Msa0009190:intron 40.0%
! TGATAATGTTACCAAGGGTG+AGG - chr1_1:13398286-13398305 Msa0009190:intron 40.0%
GATAATGTTACCAAGGGTGA+GGG - chr1_1:13398287-13398306 Msa0009190:intron 40.0%
GAAAATGAAGGTCAAGTGGA+AGG - chr1_1:13398446-13398465 Msa0009190:CDS 40.0%
AGGTCAAGTGGAAGGAAATT+AGG - chr1_1:13398454-13398473 Msa0009190:CDS 40.0%
!! GCAAGAAAAGCACCAAGAAT+TGG + chr1_1:13396418-13396437 Msa0009180:intron 40.0%
! TGCAAATCAGCCGGTTTATA+AGG + chr1_1:13396569-13396588 Msa0009180:intron 40.0%
ACTCAACTATGCAAATCAGC+CGG + chr1_1:13396578-13396597 Msa0009180:intron 40.0%
TGATAGGATCACAAGGACTT+AGG + chr1_1:13396972-13396991 Msa0009180:intron 40.0%
CTCATAGTGATAGGATCACA+AGG + chr1_1:13396979-13396998 Msa0009180:intron 40.0%
AATGCAAGCTGTGATGTTGT+GGG + chr1_1:13397012-13397031 Msa0009180:intron 40.0%
TCTCTATGCGTAATCTCCAT+TGG - chr1_1:13397042-13397061 Msa0009190:CDS 40.0%
GTTTAGTTGGTCCATACCAA+AGG + chr1_1:13397097-13397116 Msa0009180:intron 40.0%
TGGTATGGACCAACTAAACA+AGG - chr1_1:13397098-13397117 Msa0009190:CDS 40.0%
AAAGATGCAGGAATCGTAGA+CGG - chr1_1:13397123-13397142 Msa0009190:CDS 40.0%
! TCGTAGACGGCTACTTTAAT+TGG - chr1_1:13397136-13397155 Msa0009190:CDS 40.0%
GAACCAAAAGGCAATGTGAT+TGG - chr1_1:13397318-13397337 Msa0009190:intron 40.0%
! TCACCAATCACATTGCCTTT+TGG + chr1_1:13397324-13397343 Msa0009180:intron 40.0%
AGTGCTTTGCAATCACTAAC+CGG - chr1_1:13397566-13397585 Msa0009190:CDS 40.0%
TCTTGGTTGAGATCTTGTTG+TGG + chr1_1:13397648-13397667 Msa0009180:intron 40.0%
!!! CGTCTTAGTTTTGATGCTGA+AGG + chr1_1:13397930-13397949 Msa0009180:intron 40.0%
! GCTGAAGCTTTTAATGGTGT+TGG - chr1_1:13398146-13398165 Msa0009190:intron 40.0%
GCTACACTAGACATAGATTG+AGG + chr1_1:13398200-13398219 Msa0009180:intron 40.0%
AGTGTAGCATCAACACTTTC+TGG - chr1_1:13398212-13398231 Msa0009190:intron 40.0%
GCATCAACACTTTCTGGATT+AGG - chr1_1:13398218-13398237 Msa0009190:intron 40.0%
! TGATAATGTTACCAAGGGTG+AGG - chr1_1:13398286-13398305 Msa0009190:intron 40.0%
GATAATGTTACCAAGGGTGA+GGG - chr1_1:13398287-13398306 Msa0009190:intron 40.0%
GAAAATGAAGGTCAAGTGGA+AGG - chr1_1:13398446-13398465 Msa0009190:CDS 40.0%
AGGTCAAGTGGAAGGAAATT+AGG - chr1_1:13398454-13398473 Msa0009190:CDS 40.0%
AATTAGTAGCTGCTGACCAG+AGG + chr1_1:13396390-13396409 Msa0009180:intron 45.0%
! ATCAGCCGGTTTATAAGGTG+AGG + chr1_1:13396564-13396583 Msa0009180:intron 45.0%
GAGTTGCAGCTCATAGTGAT+AGG + chr1_1:13396988-13397007 Msa0009180:intron 45.0%
GAATGCAAGCTGTGATGTTG+TGG + chr1_1:13397013-13397032 Msa0009180:intron 45.0%
TGCGTAATCTCCATTGGAGT+TGG - chr1_1:13397048-13397067 Msa0009190:CDS 45.0%
GTAATCTCCATTGGAGTTGG+TGG - chr1_1:13397051-13397070 Msa0009190:CDS 45.0%
TCTTACACCACCAACTCCAA+TGG + chr1_1:13397061-13397080 Msa0009180:intron 45.0%
CATACCAAAGGCTAAAGAGG+AGG + chr1_1:13397085-13397104 Msa0009180:intron 45.0%
! CTCCTCTTTAGCCTTTGGTA+TGG - chr1_1:13397083-13397102 Msa0009190:CDS 45.0%
GTCCATACCAAAGGCTAAAG+AGG + chr1_1:13397088-13397107 Msa0009180:intron 45.0%
TGGCATGTACTTCTGTGACA+AGG - chr1_1:13397416-13397435 Msa0009190:CDS 45.0%
CTATTGTGCAAAGGCTCCAT+TGG + chr1_1:13397686-13397705 Msa0009180:intron 45.0%
CAAAGTAATGTGGCGGTTCA+TGG + chr1_1:13397820-13397839 Msa0009180:intron 45.0%
AGCTTCAGTGGCAACATTCA+TGG - chr1_1:13397857-13397876 Msa0009190:CDS 45.0%
GACATGTTCACAACACCTTG+TGG + chr1_1:13398086-13398105 Msa0009180:intron 45.0%
CTGCCAAGGCAAATTCTTGA+TGG - chr1_1:13398119-13398138 Msa0009190:intron 45.0%
AATTAGTAGCTGCTGACCAG+AGG + chr1_1:13396390-13396409 Msa0009180:intron 45.0%
! ATCAGCCGGTTTATAAGGTG+AGG + chr1_1:13396564-13396583 Msa0009180:intron 45.0%
GAGTTGCAGCTCATAGTGAT+AGG + chr1_1:13396988-13397007 Msa0009180:intron 45.0%
GAATGCAAGCTGTGATGTTG+TGG + chr1_1:13397013-13397032 Msa0009180:intron 45.0%
TGCGTAATCTCCATTGGAGT+TGG - chr1_1:13397048-13397067 Msa0009190:CDS 45.0%
GTAATCTCCATTGGAGTTGG+TGG - chr1_1:13397051-13397070 Msa0009190:CDS 45.0%
TCTTACACCACCAACTCCAA+TGG + chr1_1:13397061-13397080 Msa0009180:intron 45.0%
CATACCAAAGGCTAAAGAGG+AGG + chr1_1:13397085-13397104 Msa0009180:intron 45.0%
! CTCCTCTTTAGCCTTTGGTA+TGG - chr1_1:13397083-13397102 Msa0009190:CDS 45.0%
GTCCATACCAAAGGCTAAAG+AGG + chr1_1:13397088-13397107 Msa0009180:intron 45.0%
TGGCATGTACTTCTGTGACA+AGG - chr1_1:13397416-13397435 Msa0009190:CDS 45.0%
CTATTGTGCAAAGGCTCCAT+TGG + chr1_1:13397686-13397705 Msa0009180:intron 45.0%
CAAAGTAATGTGGCGGTTCA+TGG + chr1_1:13397820-13397839 Msa0009180:intron 45.0%
AGCTTCAGTGGCAACATTCA+TGG - chr1_1:13397857-13397876 Msa0009190:CDS 45.0%
GACATGTTCACAACACCTTG+TGG + chr1_1:13398086-13398105 Msa0009180:intron 45.0%
CTGCCAAGGCAAATTCTTGA+TGG - chr1_1:13398119-13398138 Msa0009190:intron 45.0%
CTACCAATGTGATCCTCCTC+TGG - chr1_1:13396371-13396390 Msa0009190:CDS 50.0%
TGACCAGAGGAGGATCACAT+TGG + chr1_1:13396377-13396396 Msa0009180:intron 50.0%
GAGATCCAAAGGCGATGGTA+GGG + chr1_1:13396462-13396481 Msa0009180:intron 50.0%
AGAGATCCAAAGGCGATGGT+AGG + chr1_1:13396463-13396482 Msa0009180:intron 50.0%
GAGAAGAGATCCAAAGGCGA+TGG + chr1_1:13396467-13396486 Msa0009180:intron 50.0%
GGATCACAAGGACTTAGGCT+TGG + chr1_1:13396967-13396986 Msa0009180:intron 50.0%
! AGAGCCTCCTCTTTAGCCTT+TGG - chr1_1:13397078-13397097 Msa0009190:CDS 50.0%
ACAGCAGCTGCAGTCCTAAT+TGG - chr1_1:13397171-13397190 Msa0009190:CDS 50.0%
AGTAATGTGGCGGTTCATGG+AGG + chr1_1:13397817-13397836 Msa0009180:intron 50.0%
AATGTTGCCACTGAAGCTGC+GGG + chr1_1:13397855-13397874 Msa0009180:intron 50.0%
GAATGTTGCCACTGAAGCTG+CGG + chr1_1:13397856-13397875 Msa0009180:intron 50.0%
CAGTTATGTGGCTACTGCCA+AGG - chr1_1:13398105-13398124 Msa0009190:intron 50.0%
TGTTACCAAGGGTGAGGGAA+AGG - chr1_1:13398292-13398311 Msa0009190:intron 50.0%
ACTTTCCTTTCCCTCACCCT+TGG + chr1_1:13398300-13398319 Msa0009180:intron 50.0%
AGGGTGAGGGAAAGGAAAGT+TGG - chr1_1:13398300-13398319 Msa0009190:intron 50.0%
GGGTGAGGGAAAGGAAAGTT+GGG - chr1_1:13398301-13398320 Msa0009190:intron 50.0%
CTACCAATGTGATCCTCCTC+TGG - chr1_1:13396371-13396390 Msa0009190:CDS 50.0%
TGACCAGAGGAGGATCACAT+TGG + chr1_1:13396377-13396396 Msa0009180:intron 50.0%
GAGATCCAAAGGCGATGGTA+GGG + chr1_1:13396462-13396481 Msa0009180:intron 50.0%
AGAGATCCAAAGGCGATGGT+AGG + chr1_1:13396463-13396482 Msa0009180:intron 50.0%
GAGAAGAGATCCAAAGGCGA+TGG + chr1_1:13396467-13396486 Msa0009180:intron 50.0%
GGATCACAAGGACTTAGGCT+TGG + chr1_1:13396967-13396986 Msa0009180:intron 50.0%
! AGAGCCTCCTCTTTAGCCTT+TGG - chr1_1:13397078-13397097 Msa0009190:CDS 50.0%
ACAGCAGCTGCAGTCCTAAT+TGG - chr1_1:13397171-13397190 Msa0009190:CDS 50.0%
AGTAATGTGGCGGTTCATGG+AGG + chr1_1:13397817-13397836 Msa0009180:intron 50.0%
AATGTTGCCACTGAAGCTGC+GGG + chr1_1:13397855-13397874 Msa0009180:intron 50.0%
GAATGTTGCCACTGAAGCTG+CGG + chr1_1:13397856-13397875 Msa0009180:intron 50.0%
CAGTTATGTGGCTACTGCCA+AGG - chr1_1:13398105-13398124 Msa0009190:intron 50.0%
TGTTACCAAGGGTGAGGGAA+AGG - chr1_1:13398292-13398311 Msa0009190:intron 50.0%
ACTTTCCTTTCCCTCACCCT+TGG + chr1_1:13398300-13398319 Msa0009180:intron 50.0%
AGGGTGAGGGAAAGGAAAGT+TGG - chr1_1:13398300-13398319 Msa0009190:intron 50.0%
GGGTGAGGGAAAGGAAAGTT+GGG - chr1_1:13398301-13398320 Msa0009190:intron 50.0%
TAGTAGCTGCTGACCAGAGG+AGG + chr1_1:13396387-13396406 Msa0009180:intron 55.0%
CAAAATCCCCGCAGCTTCAG+TGG - chr1_1:13397845-13397864 Msa0009190:CDS 55.0%
ATGTTGCCACTGAAGCTGCG+GGG + chr1_1:13397854-13397873 Msa0009180:intron 55.0%
TAGTAGCTGCTGACCAGAGG+AGG + chr1_1:13396387-13396406 Msa0009180:intron 55.0%
CAAAATCCCCGCAGCTTCAG+TGG - chr1_1:13397845-13397864 Msa0009190:CDS 55.0%
ATGTTGCCACTGAAGCTGCG+GGG + chr1_1:13397854-13397873 Msa0009180:intron 55.0%
CGCTACCCTACCATCGCCTT+TGG - chr1_1:13396454-13396473 Msa0009190:CDS 60.0%
CGCTACCCTACCATCGCCTT+TGG - chr1_1:13396454-13396473 Msa0009190:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 13396298 13398515 13396298 ID=Msa0009190;Name=Msa0009190
chr1_1 mRNA 13396298 13398515 13396298 ID=Msa0009190-mRNA-1;Parent=Msa0009190;Name=Msa0009190-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.5|0.33|1|1|1|3|40|533
chr1_1 exon 13396298 13397199 13396298 ID=Msa0009190-mRNA-1:exon:5115;Parent=Msa0009190-mRNA-1
chr1_1 exon 13397341 13397882 13397341 ID=Msa0009190-mRNA-1:exon:5114;Parent=Msa0009190-mRNA-1
chr1_1 exon 13398318 13398515 13398318 ID=Msa0009190-mRNA-1:exon:5113;Parent=Msa0009190-mRNA-1
chr1_1 CDS 13398318 13398515 13398318 ID=Msa0009190-mRNA-1:cds;Parent=Msa0009190-mRNA-1
chr1_1 CDS 13397341 13397882 13397341 ID=Msa0009190-mRNA-1:cds;Parent=Msa0009190-mRNA-1
chr1_1 CDS 13396338 13397199 13396338 ID=Msa0009190-mRNA-1:cds;Parent=Msa0009190-mRNA-1
chr1_1 three_prime_UTR 13396298 13396337 13396298 ID=Msa0009190-mRNA-1:three_prime_utr;Parent=Msa0009190-mRNA-1
Gene Sequence

>Msa0009190

ATGGCAAGTTTTGGAATATTGCCAAACATGATTATGTATTTAACAAGACATTACGGGATGGAAGCTGCTGCAGCTACCAATGTGATCCTCCTCTGGTCAGCAGCTACTAATTTCACACCAATTCTTGGTGCTTTTCTTGCTGATTCTTACTTTGGTCGCTACCCTACCATCGCCTTTGGATCTCTTCTCAATTTACTTGGAATGCTACTTTTTTGGCTAACAACTATGATTCCAAGCCTAAGTCCTTGTGATCCTATCACTATGAGCTGCAACTCTCCCACAACATCACAGCTTGCATTCTTATACTCTTCTCTATGCGTAATCTCCATTGGAGTTGGTGGTGTAAGAGCCTCCTCTTTAGCCTTTGGTATGGACCAACTAAACAAGGAAAAAGATGCAGGAATCGTAGACGGCTACTTTAATTGGAGCTTTGCTTTAACAGCAGCTGCAGTCCTAATTGGAATGACCATTTTGGCATATATTCAAGAAAAGTTTGGTTGGATTGTTGGATTTGGTGTACCTGTTGTCTTCATGTTCATATCTATGGTGTCTTTCTTTTTAGCTTCTTCATTCTATGTTAAGGTGGAACCAAAAGGCAATGTGATTGGTGAGTTCGCTCGAGTTGTCATCGTGTCTTACAGAAACAGAAACATCAAATTACCATCACCAAATGTCATTAATGATGGCATGTACTTCTGTGACAAGGATTCTGCAATGCTTATTCCAAGTGATAAATTCAGGTTTCTAAACAAAGCATGCCTTATAAAAAATCCACAACAAGATCTCAACCAAGATGAAGAACTTCATAACCAATGGAGCCTTTGCACAATAGATCAAGTAGAAGCATTCAAAGCAATGATCAAAATCATCCCAATTTGGATAACAGGAATGATAATGTATATTAATATGAGTCAAGGAACATTTTATGTACTAGAAGCATCCTCCATGAACCGCCACATTACTTTGAACTTCAAAATCCCCGCAGCTTCAGTGGCAACATTCATGGTTCTTTTTACAGTACTATGGCTTGTCCTCTATGATTGTGTTATAATCCCTTCAGCATCAAAACTAAGACGTTCACCGACTCGATTAAGAGTAAAACAAAAAATGGGAATTGGATTAATCGGAATATGTTTATCAACATCTTCATTGGCAATTGTAGAAGGTAAAAGAAGAAAATTAGCAATTGATGAAGGCTTTATAGAATTTCCACAAGGTGTTGTGAACATGTCAGTTATGTGGCTACTGCCAAGGCAAATTCTTGATGGTTTTGCTGAAGCTTTTAATGGTGTTGGACAAAATGAGTTTTTTATATGTGAATTGCCTCAATCTATGTCTAGTGTAGCATCAACACTTTCTGGATTAGGTATGTCAATTGGAAATGTTCTGGCTAGTTTGATTTTGAGTGTTGTTGATAATGTTACCAAGGGTGAGGGAAAGGAAAGTTGGGTTTCTAGTAACATAAATAAGGGACATTATGATTACTATTATTGGCTTCTTTTTGGATTGATGTTGGCCAATTTTTTGGGTTTTCTTTGTTTTAGTAAGGTTTATGGACCTTGTAAGGGAGAAGAAAATGAAGGTCAAGTGGAAGGAAATTAG
Protein sequence

>Msa0009190

MASFGILPNMIMYLTRHYGMEAAAATNVILLWSAATNFTPILGAFLADSYFGRYPTIAFGSLLNLLGMLLFWLTTMIPSLSPCDPITMSCNSPTTSQLAFLYSSLCVISIGVGGVRASSLAFGMDQLNKEKDAGIVDGYFNWSFALTAAAVLIGMTILAYIQEKFGWIVGFGVPVVFMFISMVSFFLASSFYVKVEPKGNVIGEFARVVIVSYRNRNIKLPSPNVINDGMYFCDKDSAMLIPSDKFRFLNKACLIKNPQQDLNQDEELHNQWSLCTIDQVEAFKAMIKIIPIWITGMIMYINMSQGTFYVLEASSMNRHITLNFKIPAASVATFMVLFTVLWLVLYDCVIIPSASKLRRSPTRLRVKQKMGIGLIGICLSTSSLAIVEGKRRKLAIDEGFIEFPQGVVNMSVMWLLPRQILDGFAEAFNGVGQNEFFICELPQSMSSVASTLSGLGMSIGNVLASLILSVVDNVTKGEGKESWVSSNINKGHYDYYYWLLFGLMLANFLGFLCFSKVYGPCKGEENEGQVEGN*