Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901070 | XP_022016541.1 | 33.125 | 160 | 107 | 0 | 13 | 172 | 4 | 163 | 3.95e-19 | 93.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901070 | sp|Q8LC68|NRP2_ARATH | 29.609 | 179 | 114 | 2 | 33 | 199 | 21 | 199 | 7.02e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901070 | A0A251VFP3 | 33.125 | 160 | 107 | 0 | 13 | 172 | 4 | 163 | 1.89e-19 | 93.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0901070 | 0.801914 | 7.190214e-49 | -8.615850e-47 |
| Msa0002240 | Msa0901070 | 0.809858 | 1.537477e-50 | -8.615850e-47 |
| Msa0009190 | Msa0901070 | 0.803754 | 2.997628e-49 | -8.615850e-47 |
| Msa0015390 | Msa0901070 | 0.800652 | 1.303205e-48 | -8.615850e-47 |
| Msa0057680 | Msa0901070 | -0.826113 | 3.241114e-54 | -8.615850e-47 |
| Msa0075470 | Msa0901070 | 0.804782 | 1.831519e-49 | -8.615850e-47 |
| Msa0084380 | Msa0901070 | 0.803956 | 2.721670e-49 | -8.615850e-47 |
| Msa0090320 | Msa0901070 | 0.832779 | 7.781935e-56 | -8.615850e-47 |
| Msa0092520 | Msa0901070 | 0.818383 | 2.017289e-52 | -8.615850e-47 |
| Msa0105260 | Msa0901070 | 0.808648 | 2.793813e-50 | -8.615850e-47 |
| Msa0114430 | Msa0901070 | 0.800756 | 1.241498e-48 | -8.615850e-47 |
| Msa0602980 | Msa0901070 | 0.801821 | 7.513641e-49 | -8.615850e-47 |
| Msa0610800 | Msa0901070 | 0.815885 | 7.348944e-52 | -8.615850e-47 |
| Msa0613440 | Msa0901070 | 0.800506 | 1.396119e-48 | -8.615850e-47 |
| Msa0615010 | Msa0901070 | 0.811315 | 7.444694e-51 | -8.615850e-47 |
| Msa0632740 | Msa0901070 | 0.815967 | 7.048718e-52 | -8.615850e-47 |
| Msa0641670 | Msa0901070 | 0.802499 | 5.449431e-49 | -8.615850e-47 |
| Msa0645300 | Msa0901070 | 0.807366 | 5.236417e-50 | -8.615850e-47 |
| Msa0649110 | Msa0901070 | 0.836712 | 7.966148e-57 | -8.615850e-47 |
| Msa0652940 | Msa0901070 | 0.810428 | 1.158165e-50 | -8.615850e-47 |
| Msa0681250 | Msa0901070 | 0.808214 | 3.457443e-50 | -8.615850e-47 |
| Msa0681270 | Msa0901070 | 0.806954 | 6.400994e-50 | -8.615850e-47 |
| Msa0701010 | Msa0901070 | 0.842395 | 2.654962e-58 | -8.615850e-47 |
| Msa0729030 | Msa0901070 | 0.806219 | 9.146866e-50 | -8.615850e-47 |
| Msa0731940 | Msa0901070 | 0.835781 | 1.374204e-56 | -8.615850e-47 |
| Msa0739280 | Msa0901070 | 0.805447 | 1.328963e-49 | -8.615850e-47 |
| Msa0748970 | Msa0901070 | 0.974155 | 1.164071e-137 | -8.615850e-47 |
| Msa0755180 | Msa0901070 | 0.806196 | 9.252461e-50 | -8.615850e-47 |
| Msa0767750 | Msa0901070 | 0.807830 | 4.172946e-50 | -8.615850e-47 |
| Msa0767810 | Msa0901070 | 0.808411 | 3.138886e-50 | -8.615850e-47 |
| Msa0768290 | Msa0901070 | 0.867266 | 1.553325e-65 | -8.615850e-47 |
| Msa0768310 | Msa0901070 | 0.808410 | 3.140488e-50 | -8.615850e-47 |
| Msa0768370 | Msa0901070 | 0.878894 | 1.940226e-69 | -8.615850e-47 |
| Msa0773180 | Msa0901070 | 0.851764 | 7.173535e-61 | -8.615850e-47 |
| Msa0784290 | Msa0901070 | 0.806019 | 1.007913e-49 | -8.615850e-47 |
| Msa0800210 | Msa0901070 | 0.811510 | 6.752549e-51 | -8.615850e-47 |
| Msa0810220 | Msa0901070 | 0.822831 | 1.919383e-53 | -8.615850e-47 |
| Msa0820850 | Msa0901070 | 0.813407 | 2.600361e-51 | -8.615850e-47 |
| Msa0824590 | Msa0901070 | 0.818453 | 1.945097e-52 | -8.615850e-47 |
| Msa0826320 | Msa0901070 | 0.851464 | 8.724965e-61 | -8.615850e-47 |
| Msa0832340 | Msa0901070 | 0.809354 | 1.972615e-50 | -8.615850e-47 |
| Msa0131770 | Msa0901070 | 0.853651 | 2.075700e-61 | -8.615850e-47 |
| Msa0137640 | Msa0901070 | 0.834468 | 2.945531e-56 | -8.615850e-47 |
| Msa0145190 | Msa0901070 | 0.827634 | 1.404085e-54 | -8.615850e-47 |
| Msa0170220 | Msa0901070 | 0.817202 | 3.725682e-52 | -8.615850e-47 |
| Msa0179430 | Msa0901070 | 0.801655 | 8.126201e-49 | -8.615850e-47 |
| Msa0180500 | Msa0901070 | 0.829419 | 5.202334e-55 | -8.615850e-47 |
| Msa0182740 | Msa0901070 | 0.836986 | 6.783700e-57 | -8.615850e-47 |
| Msa0188460 | Msa0901070 | 0.804143 | 2.488646e-49 | -8.615850e-47 |
| Msa0196840 | Msa0901070 | 0.800433 | 1.444802e-48 | -8.615850e-47 |
| Msa0198910 | Msa0901070 | 0.807116 | 5.915569e-50 | -8.615850e-47 |
| Msa0379940 | Msa0901070 | 0.825329 | 4.974856e-54 | -8.615850e-47 |
| Msa0380850 | Msa0901070 | 0.818105 | 2.331434e-52 | -8.615850e-47 |
| Msa0385840 | Msa0901070 | 0.816928 | 4.294423e-52 | -8.615850e-47 |
| Msa0411390 | Msa0901070 | 0.825235 | 5.236799e-54 | -8.615850e-47 |
| Msa0413410 | Msa0901070 | 0.820930 | 5.287838e-53 | -8.615850e-47 |
| Msa0424320 | Msa0901070 | 0.848654 | 5.340054e-60 | -8.615850e-47 |
| Msa0425790 | Msa0901070 | 0.829849 | 4.089038e-55 | -8.615850e-47 |
| Msa0430920 | Msa0901070 | 0.816975 | 4.191229e-52 | -8.615850e-47 |
| Msa0434000 | Msa0901070 | 0.855344 | 6.719047e-62 | -8.615850e-47 |
| Msa0434180 | Msa0901070 | 0.805422 | 1.345117e-49 | -8.615850e-47 |
| Msa0450000 | Msa0901070 | 0.805528 | 1.278349e-49 | -8.615850e-47 |
| Msa0251640 | Msa0901070 | 0.824783 | 6.692635e-54 | -8.615850e-47 |
| Msa0275000 | Msa0901070 | 0.801707 | 7.930094e-49 | -8.615850e-47 |
| Msa0275020 | Msa0901070 | 0.815669 | 8.213611e-52 | -8.615850e-47 |
| Msa0278110 | Msa0901070 | 0.811303 | 7.487903e-51 | -8.615850e-47 |
| Msa0278190 | Msa0901070 | 0.833058 | 6.630445e-56 | -8.615850e-47 |
| Msa0290870 | Msa0901070 | 0.812334 | 4.466146e-51 | -8.615850e-47 |
| Msa0296880 | Msa0901070 | 0.805250 | 1.461764e-49 | -8.615850e-47 |
| Msa0305190 | Msa0901070 | 0.813224 | 2.851747e-51 | -8.615850e-47 |
| Msa0313960 | Msa0901070 | 0.828387 | 9.246219e-55 | -8.615850e-47 |
| Msa0315940 | Msa0901070 | 0.811797 | 5.849861e-51 | -8.615850e-47 |
| Msa0321310 | Msa0901070 | 0.812692 | 3.730501e-51 | -8.615850e-47 |
| Msa0322360 | Msa0901070 | 0.801020 | 1.096245e-48 | -8.615850e-47 |
| Msa0339620 | Msa0901070 | 0.803011 | 4.273008e-49 | -8.615850e-47 |
| Msa0342750 | Msa0901070 | 0.950513 | 1.411301e-108 | -8.615850e-47 |
| Msa0342810 | Msa0901070 | 0.837178 | 6.057748e-57 | -8.615850e-47 |
| Msa0344920 | Msa0901070 | 0.817012 | 4.111174e-52 | -8.615850e-47 |
| Msa0483150 | Msa0901070 | 0.809653 | 1.701228e-50 | -8.615850e-47 |
| Msa0490140 | Msa0901070 | 0.811820 | 5.781319e-51 | -8.615850e-47 |
| Msa0493000 | Msa0901070 | 0.836565 | 8.687400e-57 | -8.615850e-47 |
| Msa0502340 | Msa0901070 | 0.801058 | 1.077196e-48 | -8.615850e-47 |
| Msa0519000 | Msa0901070 | 0.805679 | 1.188160e-49 | -8.615850e-47 |
| Msa0523940 | Msa0901070 | 0.834882 | 2.318214e-56 | -8.615850e-47 |
| Msa0529040 | Msa0901070 | 0.800546 | 1.370086e-48 | -8.615850e-47 |
| Msa0534230 | Msa0901070 | 0.800608 | 1.330537e-48 | -8.615850e-47 |
| Msa0537720 | Msa0901070 | 0.842037 | 3.302781e-58 | -8.615850e-47 |
| Msa0545700 | Msa0901070 | 0.812363 | 4.402447e-51 | -8.615850e-47 |
| Msa0555700 | Msa0901070 | 0.801067 | 1.072587e-48 | -8.615850e-47 |
| Msa0585230 | Msa0901070 | 0.811492 | 6.814667e-51 | -8.615850e-47 |
| Msa0842710 | Msa0901070 | 0.802260 | 6.103774e-49 | -8.615850e-47 |
| Msa0844420 | Msa0901070 | 0.816923 | 4.304618e-52 | -8.615850e-47 |
| Msa0844490 | Msa0901070 | 0.860310 | 2.258290e-63 | -8.615850e-47 |
| Msa0849030 | Msa0901070 | 0.829853 | 4.080689e-55 | -8.615850e-47 |
| Msa0857640 | Msa0901070 | 0.800324 | 1.520162e-48 | -8.615850e-47 |
| Msa0861130 | Msa0901070 | 0.818984 | 1.473200e-52 | -8.615850e-47 |
| Msa0864070 | Msa0901070 | 0.823037 | 1.718061e-53 | -8.615850e-47 |
| Msa0868700 | Msa0901070 | 0.831768 | 1.383870e-55 | -8.615850e-47 |
| Msa0877250 | Msa0901070 | 0.859896 | 3.010818e-63 | -8.615850e-47 |
| Msa0888130 | Msa0901070 | 0.836864 | 7.288238e-57 | -8.615850e-47 |
| Msa0897330 | Msa0901070 | 0.812755 | 3.614621e-51 | -8.615850e-47 |
| Msa0899430 | Msa0901070 | 0.836825 | 7.456690e-57 | -8.615850e-47 |
| Msa0899450 | Msa0901070 | 0.828790 | 7.389503e-55 | -8.615850e-47 |
| Msa0900910 | Msa0901070 | 0.926133 | 7.121166e-91 | -8.615850e-47 |
| Msa0900970 | Msa0901070 | 0.831009 | 2.128066e-55 | -8.615850e-47 |
| Msa0900980 | Msa0901070 | 0.820650 | 6.130801e-53 | -8.615850e-47 |
| Msa0901020 | Msa0901070 | 0.871533 | 6.354389e-67 | -8.615850e-47 |
| Msa0901070 | Msa0907950 | 0.814705 | 1.344863e-51 | -8.615850e-47 |
| Msa0901070 | Msa0914270 | 0.809768 | 1.607440e-50 | -8.615850e-47 |
| Msa0901070 | Msa0914760 | 0.815080 | 1.110540e-51 | -8.615850e-47 |
| Msa0901070 | Msa0915680 | 0.832215 | 1.073492e-55 | -8.615850e-47 |
| Msa0901070 | Msa0924050 | 0.835187 | 1.942098e-56 | -8.615850e-47 |
| Msa0901070 | Msa0924060 | 0.809378 | 1.948658e-50 | -8.615850e-47 |
| Msa0901070 | Msa0925290 | 0.811895 | 5.568448e-51 | -8.615850e-47 |
| Msa0901070 | Msa0925870 | 0.810358 | 1.199386e-50 | -8.615850e-47 |
| Msa0901070 | Msa0927380 | 0.835606 | 1.521557e-56 | -8.615850e-47 |
| Msa0901070 | Msa0936300 | 0.820464 | 6.763673e-53 | -8.615850e-47 |
| Msa0901070 | Msa0948320 | 0.810542 | 1.094359e-50 | -8.615850e-47 |
| Msa0901070 | Msa0952720 | 0.815282 | 1.001467e-51 | -8.615850e-47 |
| Msa0901070 | Msa0958550 | 0.833788 | 4.360531e-56 | -8.615850e-47 |
| Msa0901070 | Msa0964900 | 0.811194 | 7.908878e-51 | -8.615850e-47 |
| Msa0901070 | Msa0966750 | 0.880987 | 3.487774e-70 | -8.615850e-47 |
| Msa0901070 | Msa0966770 | 0.848230 | 6.998722e-60 | -8.615850e-47 |
| Msa0901070 | Msa0967280 | 0.879831 | 9.040052e-70 | -8.615850e-47 |
| Msa0901070 | Msa0969520 | 0.811483 | 6.846384e-51 | -8.615850e-47 |
| Msa0901070 | Msa0969810 | 0.810412 | 1.167716e-50 | -8.615850e-47 |
| Msa0901070 | Msa0973100 | 0.821507 | 3.891642e-53 | -8.615850e-47 |
| Msa0901070 | Msa0974070 | 0.807297 | 5.413645e-50 | -8.615850e-47 |
| Msa0901070 | Msa0974080 | 0.837569 | 4.810151e-57 | -8.615850e-47 |
| Msa0901070 | Msa0976670 | 0.841903 | 3.582523e-58 | -8.615850e-47 |
| Msa0901070 | Msa0989620 | 0.835311 | 1.806719e-56 | -8.615850e-47 |
| Msa0901070 | Msa0997500 | 0.822500 | 2.291882e-53 | -8.615850e-47 |
| Msa0901070 | Msa0998690 | 0.816319 | 5.880234e-52 | -8.615850e-47 |
| Msa0901070 | Msa1000880 | 0.801508 | 8.710260e-49 | -8.615850e-47 |
| Msa0901070 | Msa1000890 | 0.816519 | 5.303211e-52 | -8.615850e-47 |
| Msa0901070 | Msa1000900 | 0.802161 | 6.397043e-49 | -8.615850e-47 |
| Msa0901070 | Msa1014540 | 0.810575 | 1.076975e-50 | -8.615850e-47 |
| Msa0901070 | Msa1015490 | 0.810645 | 1.040113e-50 | -8.615850e-47 |
| Msa0901070 | Msa1023950 | 0.802060 | 6.711052e-49 | -8.615850e-47 |
| Msa0901070 | Msa1051210 | 0.810112 | 1.355465e-50 | -8.615850e-47 |
| Msa0901070 | Msa1054150 | -0.804022 | 2.636824e-49 | -8.615850e-47 |
| Msa0901070 | Msa1060840 | 0.802842 | 4.630989e-49 | -8.615850e-47 |
| Msa0901070 | Msa1068420 | 0.826475 | 2.658566e-54 | -8.615850e-47 |
| Msa0901070 | Msa1075650 | 0.814831 | 1.260622e-51 | -8.615850e-47 |
| Msa0901070 | Msa1109680 | 0.822595 | 2.178309e-53 | -8.615850e-47 |
| Msa0901070 | Msa1113170 | 0.812784 | 3.561162e-51 | -8.615850e-47 |
| Msa0901070 | Msa1117560 | 0.806883 | 6.624643e-50 | -8.615850e-47 |
| Msa0901070 | Msa1120610 | 0.826926 | 2.074721e-54 | -8.615850e-47 |
| Msa0901070 | Msa1120740 | 0.816243 | 6.113358e-52 | -8.615850e-47 |
| Msa0901070 | Msa1121480 | 0.857831 | 1.248599e-62 | -8.615850e-47 |
| Msa0901070 | Msa1121490 | 0.857142 | 1.996614e-62 | -8.615850e-47 |
| Msa0901070 | Msa1137570 | 0.828843 | 7.174061e-55 | -8.615850e-47 |
| Msa0901070 | Msa1139680 | 0.807899 | 4.033557e-50 | -8.615850e-47 |
| Msa0901070 | Msa1146120 | 0.805629 | 1.217135e-49 | -8.615850e-47 |
| Msa0901070 | Msa1156020 | 0.825769 | 3.913678e-54 | -8.615850e-47 |
| Msa0901070 | Msa1195190 | 0.801247 | 9.851612e-49 | -8.615850e-47 |
| Msa0901070 | Msa1241130 | -0.800671 | 1.291656e-48 | -8.615850e-47 |
| Msa0901070 | Msa1248300 | 0.852951 | 3.295441e-61 | -8.615850e-47 |
| Msa0901070 | Msa1248310 | 0.855664 | 5.418731e-62 | -8.615850e-47 |
| Msa0901070 | Msa1248370 | 0.867689 | 1.137415e-65 | -8.615850e-47 |
| Msa0901070 | Msa1276890 | 0.831037 | 2.094565e-55 | -8.615850e-47 |
| Msa0901070 | Msa1277660 | 0.818691 | 1.717113e-52 | -8.615850e-47 |
| Msa0901070 | Msa1282580 | -0.816149 | 6.417488e-52 | -8.615850e-47 |
| Msa0901070 | Msa1284680 | 0.819220 | 1.302454e-52 | -8.615850e-47 |
| Msa0901070 | Msa1286800 | 0.827112 | 1.872274e-54 | -8.615850e-47 |
| Msa0901070 | Msa1287190 | 0.809493 | 1.841197e-50 | -8.615850e-47 |
| Msa0901070 | Msa1288560 | 0.802197 | 6.289707e-49 | -8.615850e-47 |
| Msa0901070 | Msa1289420 | 0.812928 | 3.311664e-51 | -8.615850e-47 |
| Msa0901070 | Msa1299120 | 0.826750 | 2.286086e-54 | -8.615850e-47 |
| Msa0901070 | Msa1334250 | 0.801093 | 1.059122e-48 | -8.615850e-47 |
| Msa0901070 | Msa1344520 | 0.806692 | 7.270315e-50 | -8.615850e-47 |
| Msa0901070 | Msa1345220 | 0.819456 | 1.150204e-52 | -8.615850e-47 |
| Msa0901070 | Msa1366810 | 0.859346 | 4.409182e-63 | -8.615850e-47 |
| Msa0901070 | Msa1366970 | 0.852140 | 5.610030e-61 | -8.615850e-47 |
| Msa0901070 | Msa1384240 | 0.838136 | 3.439127e-57 | -8.615850e-47 |
| Msa0901070 | Msa1395900 | 0.807552 | 4.781300e-50 | -8.615850e-47 |
| Msa0901070 | Msa1400720 | 0.814089 | 1.839658e-51 | -8.615850e-47 |
| Msa0901070 | Msa1410680 | 0.808071 | 3.707737e-50 | -8.615850e-47 |
| Msa0901070 | Msa1420820 | 0.811122 | 8.197492e-51 | -8.615850e-47 |
| Msa0901070 | Msa1458750 | 0.860942 | 1.452698e-63 | -8.615850e-47 |
| Msa0901070 | Msa1466540 | 0.813334 | 2.698367e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901070 | MtrunA17_Chr4g0060621 | 34.058 | 138 | 91 | 0 | 33 | 170 | 20 | 157 | 5.80e-20 | 85.1 |
| Msa0901070 | MtrunA17_Chr3g0092521 | 28.700 | 223 | 115 | 6 | 23 | 201 | 8 | 230 | 4.19e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0901070 | AT1G18800.1 | 29.609 | 179 | 114 | 2 | 33 | 199 | 21 | 199 | 6.95e-18 | 79.7 |
| Msa0901070 | AT1G74560.1 | 29.801 | 151 | 100 | 1 | 33 | 177 | 25 | 175 | 1.50e-17 | 79.0 |
| Msa0901070 | AT1G74560.3 | 29.801 | 151 | 100 | 1 | 33 | 177 | 25 | 175 | 1.80e-17 | 79.0 |
Find 41 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTATTTGTTACCATAAAA+TGG | 0.187975 | 6_1:+97330036 | Msa0901070:three_prime_UTR |
| ATCAACTGCCTTGCTAATTT+CGG | 0.265734 | 6_1:-97327397 | None:intergenic |
| TTTATTCTTTGGCAGGTGTT+TGG | 0.281768 | 6_1:+97329855 | Msa0901070:intron |
| TTATTCTTTGGCAGGTGTTT+GGG | 0.290975 | 6_1:+97329856 | Msa0901070:intron |
| TGGATTTAGCTTTAGCTTGT+TGG | 0.316301 | 6_1:+97329973 | Msa0901070:three_prime_UTR |
| TGTTTGGGTGTGTACTGTTT+TGG | 0.348674 | 6_1:+97329871 | Msa0901070:three_prime_UTR |
| TAAGCGTGAAAGCGAAAGTT+TGG | 0.375900 | 6_1:-97330080 | None:intergenic |
| TTTGAATGACTTTGATAGAA+TGG | 0.393980 | 6_1:+97327984 | Msa0901070:CDS |
| GAGAAAGTGCAGTGGGCAAC+AGG | 0.402653 | 6_1:+97328447 | Msa0901070:CDS |
| GAATAAACTCACAAATGAAA+TGG | 0.403761 | 6_1:-97328241 | None:intergenic |
| GGCAACAGGTGTAAGCTATA+AGG | 0.408748 | 6_1:+97328461 | Msa0901070:CDS |
| TGTAGGATTTCGAAGAGAAA+AGG | 0.409008 | 6_1:+97327721 | Msa0901070:intron |
| GCTCTTGGGGAATCTTGCTT+CGG | 0.412092 | 6_1:-97327317 | None:intergenic |
| TGCTGATGTTACTTCTATCA+TGG | 0.431416 | 6_1:+97328185 | Msa0901070:CDS |
| AACGTTTGTGTGGTCCTACT+TGG | 0.436691 | 6_1:+97329953 | Msa0901070:three_prime_UTR |
| TTGGAATTATGTAAACTTGT+GGG | 0.438466 | 6_1:+97329925 | Msa0901070:three_prime_UTR |
| TGTTGTGTATGGCATAAGTT+AGG | 0.439041 | 6_1:+97330124 | Msa0901070:three_prime_UTR |
| GTGGCAGGCTGACGATGATC+AGG | 0.440468 | 6_1:+97329714 | Msa0901070:intron |
| TCACTTCGGTCATCACAGAT+AGG | 0.454456 | 6_1:-97327789 | None:intergenic |
| TTTAGATTATGACATAGAAA+TGG | 0.460098 | 6_1:+97327746 | Msa0901070:CDS |
| GTAGGATTTCGAAGAGAAAA+GGG | 0.469794 | 6_1:+97327722 | Msa0901070:intron |
| ATTATGACATAGAAATGGTC+TGG | 0.472592 | 6_1:+97327751 | Msa0901070:CDS |
| AAACATCAAGAAGGCAAGAA+TGG | 0.478874 | 6_1:+97328213 | Msa0901070:CDS |
| ATGGCATAAGTTAGGTCAAA+AGG | 0.479827 | 6_1:+97330132 | Msa0901070:three_prime_UTR |
| AGAGAGAGTGTTAATTCATA+AGG | 0.481707 | 6_1:+97329160 | Msa0901070:CDS |
| GATGTTACTTCTATCATGGT+TGG | 0.491960 | 6_1:+97328189 | Msa0901070:CDS |
| GTGCGTACCTCATTGCGCAC+TGG | 0.506973 | 6_1:-97329743 | None:intergenic |
| AAATGGTCTGGACAGAGAAA+AGG | 0.514689 | 6_1:+97327763 | Msa0901070:CDS |
| TAAGGACAGAGATGAAGATC+AGG | 0.524002 | 6_1:+97329178 | Msa0901070:CDS |
| CAGGCTGACGATGATCAGGC+TGG | 0.572324 | 6_1:+97329718 | Msa0901070:CDS |
| TGTTTCAGAGAAAGTGCAGT+GGG | 0.596117 | 6_1:+97328440 | Msa0901070:CDS |
| TTTGGAATTATGTAAACTTG+TGG | 0.600994 | 6_1:+97329924 | Msa0901070:three_prime_UTR |
| ATGGTTGGAAAACATCAAGA+AGG | 0.604620 | 6_1:+97328204 | Msa0901070:CDS |
| AGCTAAAGCTAAATCCAAGT+AGG | 0.628117 | 6_1:-97329967 | None:intergenic |
| GTGGGCATTTAACGTTTGTG+TGG | 0.639086 | 6_1:+97329943 | Msa0901070:three_prime_UTR |
| GCTATAAGGACCGCAAGGAG+AGG | 0.641512 | 6_1:+97328475 | Msa0901070:CDS |
| TTCATACTAATAAGTCGACA+TGG | 0.661825 | 6_1:-97329999 | None:intergenic |
| TGTAAGCTATAAGGACCGCA+AGG | 0.674564 | 6_1:+97328470 | Msa0901070:CDS |
| GCTGGATCCAGTGCGCAATG+AGG | 0.703489 | 6_1:+97329736 | Msa0901070:CDS |
| ATGTTTCAGAGAAAGTGCAG+TGG | 0.705196 | 6_1:+97328439 | Msa0901070:CDS |
| TAATCACTAACCTCTCCTTG+CGG | 0.722225 | 6_1:-97328485 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAGTAAAATAAACTT+CGG | - | chr6_1:97328296-97328315 | None:intergenic | 10.0% |
| !!! | AAATATAATTAATTTTGTGT+GGG | + | chr6_1:97328828-97328847 | Msa0901070:intron | 10.0% |
| !! | CAAAAAAAATAAAATTAACA+AGG | - | chr6_1:97329822-97329841 | None:intergenic | 10.0% |
| !! | GTTAAAACTAAACTAAATAT+AGG | + | chr6_1:97327527-97327546 | Msa0901070:intron | 15.0% |
| !! | AAATGTTGTAAATTTCATTT+AGG | + | chr6_1:97327870-97327889 | Msa0901070:intron | 15.0% |
| !! | TTCAAAAAATAATTAAGCTT+AGG | - | chr6_1:97327970-97327989 | None:intergenic | 15.0% |
| !! | ATTTCAAACAAAAACAAAAT+CGG | - | chr6_1:97328047-97328066 | None:intergenic | 15.0% |
| !!! | GAAATATAATTAATTTTGTG+TGG | + | chr6_1:97328827-97328846 | Msa0901070:intron | 15.0% |
| !! | ACAAAATTATCCTTAATAAA+TGG | + | chr6_1:97328874-97328893 | Msa0901070:intron | 15.0% |
| !! | TAAATAGTTAAGGATATAAT+AGG | + | chr6_1:97328939-97328958 | Msa0901070:intron | 15.0% |
| !! | AAATAACATTAATGTTTCAT+TGG | + | chr6_1:97328964-97328983 | Msa0901070:intron | 15.0% |
| !! | ACATTATAATAATATTTACC+AGG | - | chr6_1:97329344-97329363 | None:intergenic | 15.0% |
| !!! | CATTTTATTTATTATAGCTA+AGG | - | chr6_1:97329574-97329593 | None:intergenic | 15.0% |
| !! | CAAAGAATAAAAGAAAATAA+TGG | - | chr6_1:97329846-97329865 | None:intergenic | 15.0% |
| !!! | CATTATTTTCTTTTATTCTT+TGG | + | chr6_1:97329844-97329863 | Msa0901070:intron | 15.0% |
| !!! | TACCTTTTTTATGATCTTTT+GGG | - | chr6_1:97327436-97327455 | None:intergenic | 20.0% |
| !!! | ATACCTTTTTTATGATCTTT+TGG | - | chr6_1:97327437-97327456 | None:intergenic | 20.0% |
| !! | AAACTAAACTAAATATAGGT+TGG | + | chr6_1:97327531-97327550 | Msa0901070:intron | 20.0% |
| !! | TTTAGATTATGACATAGAAA+TGG | + | chr6_1:97327746-97327765 | Msa0901070:CDS | 20.0% |
| !! | AAAAATAATTAAGCTTAGGA+TGG | - | chr6_1:97327966-97327985 | None:intergenic | 20.0% |
| !! | GCAAATATCTATAAAATACA+AGG | - | chr6_1:97328168-97328187 | None:intergenic | 20.0% |
| !!! | AACTTGTAATGTTTTTGTTT+AGG | + | chr6_1:97328338-97328357 | Msa0901070:intron | 20.0% |
| !!! | AATGTTTTTGTTTAGGAATT+TGG | + | chr6_1:97328345-97328364 | Msa0901070:intron | 20.0% |
| !! | TAATAAAGGAAATAGGTATA+TGG | - | chr6_1:97328676-97328695 | None:intergenic | 20.0% |
| !! | ATTATCCTTAATAAATGGTA+TGG | + | chr6_1:97328879-97328898 | Msa0901070:intron | 20.0% |
| !! | TTATCCTTAATAAATGGTAT+GGG | + | chr6_1:97328880-97328899 | Msa0901070:intron | 20.0% |
| !! | TTGTAAAGTGACATATAATT+TGG | + | chr6_1:97328989-97329008 | Msa0901070:intron | 20.0% |
| !! | TGTAAAGTGACATATAATTT+GGG | + | chr6_1:97328990-97329009 | Msa0901070:intron | 20.0% |
| !!! | AGCTAAGGTTTTAATATAAT+TGG | - | chr6_1:97329559-97329578 | None:intergenic | 20.0% |
| !! | TTCATTTCAAAAACTAGTTA+TGG | - | chr6_1:97329640-97329659 | None:intergenic | 20.0% |
| !! | AATGAACAATAAAGATGTTA+CGG | + | chr6_1:97329654-97329673 | Msa0901070:intron | 20.0% |
| !!! | TTACAATTTTTAAAGTTCAG+AGG | - | chr6_1:97329774-97329793 | None:intergenic | 20.0% |
| !!! | TGTTATTTGTTACCATAAAA+TGG | + | chr6_1:97330036-97330055 | Msa0901070:three_prime_UTR | 20.0% |
| ! | AACCCAAAAGATCATAAAAA+AGG | + | chr6_1:97327431-97327450 | Msa0901070:CDS | 25.0% |
| ! | TAAACAAACAACTTATCTGA+TGG | - | chr6_1:97327468-97327487 | None:intergenic | 25.0% |
| ! | TGATAAACTGCATTAGATAT+TGG | + | chr6_1:97327501-97327520 | Msa0901070:intron | 25.0% |
| ! | GTTGTCTCTAATATTTGTTT+AGG | + | chr6_1:97327553-97327572 | Msa0901070:intron | 25.0% |
| !! | ATCTTTAGTCACTTTAACTA+TGG | + | chr6_1:97327585-97327604 | Msa0901070:intron | 25.0% |
| !! | TCTTTAGTCACTTTAACTAT+GGG | + | chr6_1:97327586-97327605 | Msa0901070:intron | 25.0% |
| !!! | TCTTTTTGATAATCTCACTT+CGG | - | chr6_1:97327806-97327825 | None:intergenic | 25.0% |
| ! | AAAACCTGCACAAAAAAATA+AGG | - | chr6_1:97327940-97327959 | None:intergenic | 25.0% |
| ! | TTTGAATGACTTTGATAGAA+TGG | + | chr6_1:97327984-97328003 | Msa0901070:CDS | 25.0% |
| !! | TGTTTATTAAGCTTGTTTGA+TGG | + | chr6_1:97328071-97328090 | Msa0901070:intron | 25.0% |
| !! | GTTTATTAAGCTTGTTTGAT+GGG | + | chr6_1:97328072-97328091 | Msa0901070:intron | 25.0% |
| ! | ATTCATCACGTACAAATAAA+GGG | - | chr6_1:97328126-97328145 | None:intergenic | 25.0% |
| ! | TATTCATCACGTACAAATAA+AGG | - | chr6_1:97328127-97328146 | None:intergenic | 25.0% |
| ! | GAATAAACTCACAAATGAAA+TGG | - | chr6_1:97328244-97328263 | None:intergenic | 25.0% |
| ! | AGTTTATTCTTGTCTTTACT+TGG | + | chr6_1:97328255-97328274 | Msa0901070:intron | 25.0% |
| ! | TCAACTCTAATAAAGGAAAT+AGG | - | chr6_1:97328620-97328639 | None:intergenic | 25.0% |
| ! | CTAACTCTAATAAAGGAAAT+AGG | - | chr6_1:97328683-97328702 | None:intergenic | 25.0% |
| ! | TTAGAGTCTAACTCTAATAA+AGG | - | chr6_1:97328690-97328709 | None:intergenic | 25.0% |
| ! | CACTATTGAAAACAAAGAAA+AGG | - | chr6_1:97328752-97328771 | None:intergenic | 25.0% |
| ! | GAGAGAGTAATAAATAGTTA+AGG | + | chr6_1:97328929-97328948 | Msa0901070:intron | 25.0% |
| ! | GTAAAGTGACATATAATTTG+GGG | + | chr6_1:97328991-97329010 | Msa0901070:intron | 25.0% |
| ! | AGCAATCTACAATTTAGAAA+AGG | - | chr6_1:97329291-97329310 | None:intergenic | 25.0% |
| !! | ATTGTGAAAATTTTCCTTAG+TGG | + | chr6_1:97329695-97329714 | Msa0901070:intron | 25.0% |
| !! | AGGTACATTTACAATTTTCA+AGG | - | chr6_1:97329802-97329821 | None:intergenic | 25.0% |
| !! | ATTTTCTTTTATTCTTTGGC+AGG | + | chr6_1:97329848-97329867 | Msa0901070:intron | 25.0% |
| !! | TTTGGAATTATGTAAACTTG+TGG | + | chr6_1:97329924-97329943 | Msa0901070:three_prime_UTR | 25.0% |
| ! | TTGGAATTATGTAAACTTGT+GGG | + | chr6_1:97329925-97329944 | Msa0901070:three_prime_UTR | 25.0% |
| !! | TACGATTCTTATCCATTTTA+TGG | - | chr6_1:97330051-97330070 | None:intergenic | 25.0% |
| ! | CTTTAGTCACTTTAACTATG+GGG | + | chr6_1:97327587-97327606 | Msa0901070:intron | 30.0% |
| GCTTCTAATGTTATGTTTGT+AGG | + | chr6_1:97327704-97327723 | Msa0901070:intron | 30.0% | |
| ATTATGACATAGAAATGGTC+TGG | + | chr6_1:97327751-97327770 | Msa0901070:CDS | 30.0% | |
| ! | TCAAAAAGATTCCTCTTTTC+TGG | + | chr6_1:97327817-97327836 | Msa0901070:CDS | 30.0% |
| TCTATGTAATCAAGATGTTG+CGG | + | chr6_1:97328020-97328039 | Msa0901070:intron | 30.0% | |
| CTAACTCTAATAAAGGCAAT+AGG | - | chr6_1:97328554-97328573 | None:intergenic | 30.0% | |
| TAAGGGTCTAACTCTAATAA+AGG | - | chr6_1:97328561-97328580 | None:intergenic | 30.0% | |
| CTAAGTGTCAACTCTAATAA+AGG | - | chr6_1:97328627-97328646 | None:intergenic | 30.0% | |
| CTTTCCCATACCATTTATTA+AGG | - | chr6_1:97328887-97328906 | None:intergenic | 30.0% | |
| !!! | GGACAAATTTTTTTCCCAAA+GGG | + | chr6_1:97329012-97329031 | Msa0901070:intron | 30.0% |
| !! | AGAGAGAGTGTTAATTCATA+AGG | + | chr6_1:97329160-97329179 | Msa0901070:CDS | 30.0% |
| ATTGCTGATGTCATCATATA+TGG | + | chr6_1:97329305-97329324 | Msa0901070:intron | 30.0% | |
| ! | AAGTGTTGTCAACCAAATAA+AGG | + | chr6_1:97329482-97329501 | Msa0901070:intron | 30.0% |
| !! | AAACTACTAAGTTCTGGATT+TGG | - | chr6_1:97329601-97329620 | None:intergenic | 30.0% |
| CAAAACAAACTACTAAGTTC+TGG | - | chr6_1:97329607-97329626 | None:intergenic | 30.0% | |
| !!! | GTTTTGGCTATGTAAAATTG+TGG | + | chr6_1:97329887-97329906 | Msa0901070:three_prime_UTR | 30.0% |
| ! | GTGGAAATTTTGCTTGTATT+TGG | + | chr6_1:97329906-97329925 | Msa0901070:three_prime_UTR | 30.0% |
| TTCATACTAATAAGTCGACA+TGG | - | chr6_1:97330002-97330021 | None:intergenic | 30.0% | |
| !!! | AATTTCGGCTTTTTCGGATT+TGG | - | chr6_1:97327385-97327404 | None:intergenic | 35.0% |
| ! | CTTGCTAATTTCGGCTTTTT+CGG | - | chr6_1:97327391-97327410 | None:intergenic | 35.0% |
| ATCAACTGCCTTGCTAATTT+CGG | - | chr6_1:97327400-97327419 | None:intergenic | 35.0% | |
| ! | GCTTTCTCTAAAAATACTCG+AGG | + | chr6_1:97327613-97327632 | Msa0901070:intron | 35.0% |
| TGTAGGATTTCGAAGAGAAA+AGG | + | chr6_1:97327721-97327740 | Msa0901070:intron | 35.0% | |
| GTAGGATTTCGAAGAGAAAA+GGG | + | chr6_1:97327722-97327741 | Msa0901070:intron | 35.0% | |
| !!! | GATGCCTTATTTTTTTGTGC+AGG | + | chr6_1:97327933-97327952 | Msa0901070:intron | 35.0% |
| ! | GATAGAATGGTACGACATTT+TGG | + | chr6_1:97327997-97328016 | Msa0901070:intron | 35.0% |
| ! | TGCTGATGTTACTTCTATCA+TGG | + | chr6_1:97328185-97328204 | Msa0901070:CDS | 35.0% |
| ! | GATGTTACTTCTATCATGGT+TGG | + | chr6_1:97328189-97328208 | Msa0901070:CDS | 35.0% |
| ATGGTTGGAAAACATCAAGA+AGG | + | chr6_1:97328204-97328223 | Msa0901070:CDS | 35.0% | |
| AAACATCAAGAAGGCAAGAA+TGG | + | chr6_1:97328213-97328232 | Msa0901070:CDS | 35.0% | |
| TAACAGTCAGAGTGAACTAA+GGG | - | chr6_1:97328578-97328597 | None:intergenic | 35.0% | |
| ATAACAGTCAGAGTGAACTA+AGG | - | chr6_1:97328579-97328598 | None:intergenic | 35.0% | |
| !!! | GGGACAAATTTTTTTCCCAA+AGG | + | chr6_1:97329011-97329030 | Msa0901070:intron | 35.0% |
| AATGCAGTTTCTTTAGTTGG+TGG | + | chr6_1:97329129-97329148 | Msa0901070:intron | 35.0% | |
| ATGTCATCATATATGGCTTC+TGG | + | chr6_1:97329312-97329331 | Msa0901070:intron | 35.0% | |
| TGTCATCATATATGGCTTCT+GGG | + | chr6_1:97329313-97329332 | Msa0901070:intron | 35.0% | |
| ATGCTATATCGTGACTATAG+CGG | - | chr6_1:97329418-97329437 | None:intergenic | 35.0% | |
| CTATAGTCACGATATAGCAT+TGG | + | chr6_1:97329418-97329437 | Msa0901070:intron | 35.0% | |
| GAACAATAAAGATGTTACGG+TGG | + | chr6_1:97329657-97329676 | Msa0901070:intron | 35.0% | |
| ! | TGAAAATTTTCCTTAGTGGC+AGG | + | chr6_1:97329699-97329718 | Msa0901070:intron | 35.0% |
| TTTATTCTTTGGCAGGTGTT+TGG | + | chr6_1:97329855-97329874 | Msa0901070:intron | 35.0% | |
| TTATTCTTTGGCAGGTGTTT+GGG | + | chr6_1:97329856-97329875 | Msa0901070:intron | 35.0% | |
| AGCTAAAGCTAAATCCAAGT+AGG | - | chr6_1:97329970-97329989 | None:intergenic | 35.0% | |
| !! | TGGATTTAGCTTTAGCTTGT+TGG | + | chr6_1:97329973-97329992 | Msa0901070:three_prime_UTR | 35.0% |
| !!! | GCTGTTTTTACTGTTGTGTA+TGG | + | chr6_1:97330113-97330132 | Msa0901070:three_prime_UTR | 35.0% |
| TGTTGTGTATGGCATAAGTT+AGG | + | chr6_1:97330124-97330143 | Msa0901070:three_prime_UTR | 35.0% | |
| ATGGCATAAGTTAGGTCAAA+AGG | + | chr6_1:97330132-97330151 | Msa0901070:three_prime_UTR | 35.0% | |
| TCCCCAAGAGCAAAAAAGAA+AGG | + | chr6_1:97327329-97327348 | Msa0901070:CDS | 40.0% | |
| !!! | GCCTTTCTTTTTTGCTCTTG+GGG | - | chr6_1:97327333-97327352 | None:intergenic | 40.0% |
| !!! | CGCCTTTCTTTTTTGCTCTT+GGG | - | chr6_1:97327334-97327353 | None:intergenic | 40.0% |
| !!! | ACGCCTTTCTTTTTTGCTCT+TGG | - | chr6_1:97327335-97327354 | None:intergenic | 40.0% |
| !!! | GGCTTTTTCGGATTTGGATT+TGG | - | chr6_1:97327379-97327398 | None:intergenic | 40.0% |
| CGAAAAAGCCGAAATTAGCA+AGG | + | chr6_1:97327389-97327408 | Msa0901070:CDS | 40.0% | |
| GAAGCAAGTCTAGTTACTGA+TGG | - | chr6_1:97327689-97327708 | None:intergenic | 40.0% | |
| AAATGGTCTGGACAGAGAAA+AGG | + | chr6_1:97327763-97327782 | Msa0901070:CDS | 40.0% | |
| ! | ACAGCAGTTTTCCAGAAAAG+AGG | - | chr6_1:97327831-97327850 | None:intergenic | 40.0% |
| ! | ATGTTTCAGAGAAAGTGCAG+TGG | + | chr6_1:97328439-97328458 | Msa0901070:CDS | 40.0% |
| ! | TGTTTCAGAGAAAGTGCAGT+GGG | + | chr6_1:97328440-97328459 | Msa0901070:CDS | 40.0% |
| TAATCACTAACCTCTCCTTG+CGG | - | chr6_1:97328488-97328507 | None:intergenic | 40.0% | |
| AAACGACCTACAATTTGGGA+TGG | - | chr6_1:97328786-97328805 | None:intergenic | 40.0% | |
| ! | TCCCAAATTGTAGGTCGTTT+TGG | + | chr6_1:97328786-97328805 | Msa0901070:intron | 40.0% |
| CCCAAAACGACCTACAATTT+GGG | - | chr6_1:97328790-97328809 | None:intergenic | 40.0% | |
| !! | CCCAAATTGTAGGTCGTTTT+GGG | + | chr6_1:97328787-97328806 | Msa0901070:intron | 40.0% |
| TCCCAAAGGGACATACAATT+TGG | + | chr6_1:97329025-97329044 | Msa0901070:intron | 40.0% | |
| CCCAAATTGTATGTCCCTTT+GGG | - | chr6_1:97329029-97329048 | None:intergenic | 40.0% | |
| CCCAAAGGGACATACAATTT+GGG | + | chr6_1:97329026-97329045 | Msa0901070:intron | 40.0% | |
| TCCCAAATTGTATGTCCCTT+TGG | - | chr6_1:97329030-97329049 | None:intergenic | 40.0% | |
| AAGGGACATACAATTTGGGA+CGG | + | chr6_1:97329030-97329049 | Msa0901070:intron | 40.0% | |
| GCGAATGCAGTTTCTTTAGT+TGG | + | chr6_1:97329126-97329145 | Msa0901070:intron | 40.0% | |
| TAAGGACAGAGATGAAGATC+AGG | + | chr6_1:97329178-97329197 | Msa0901070:CDS | 40.0% | |
| CAACCAAATAAAGGCTAGTG+AGG | + | chr6_1:97329491-97329510 | Msa0901070:intron | 40.0% | |
| !! | TAGCCTCACTAGCCTTTATT+TGG | - | chr6_1:97329497-97329516 | None:intergenic | 40.0% |
| ! | TGTTTGGGTGTGTACTGTTT+TGG | + | chr6_1:97329871-97329890 | Msa0901070:three_prime_UTR | 40.0% |
| TAAGCGTGAAAGCGAAAGTT+TGG | - | chr6_1:97330083-97330102 | None:intergenic | 40.0% | |
| TCACTTCGGTCATCACAGAT+AGG | - | chr6_1:97327792-97327811 | None:intergenic | 45.0% | |
| CTGGAAAACTGCTGTGAGTT+TGG | + | chr6_1:97327836-97327855 | Msa0901070:intron | 45.0% | |
| GGCAACAGGTGTAAGCTATA+AGG | + | chr6_1:97328461-97328480 | Msa0901070:CDS | 45.0% | |
| TGTAAGCTATAAGGACCGCA+AGG | + | chr6_1:97328470-97328489 | Msa0901070:CDS | 45.0% | |
| TTCCCTCCATCCCAAATTGT+AGG | + | chr6_1:97328777-97328796 | Msa0901070:intron | 45.0% | |
| ! | GACCTACAATTTGGGATGGA+GGG | - | chr6_1:97328782-97328801 | None:intergenic | 45.0% |
| GCCCAAAACGACCTACAATT+TGG | - | chr6_1:97328791-97328810 | None:intergenic | 45.0% | |
| ! | GACATACAATTTGGGACGGA+GGG | + | chr6_1:97329034-97329053 | Msa0901070:intron | 45.0% |
| !! | TATGGCTTCTGGGATAATCC+TGG | + | chr6_1:97329323-97329342 | Msa0901070:intron | 45.0% |
| AAGGCTAGTGAGGCTAATGT+AGG | + | chr6_1:97329501-97329520 | Msa0901070:intron | 45.0% | |
| GTGGGCATTTAACGTTTGTG+TGG | + | chr6_1:97329943-97329962 | Msa0901070:three_prime_UTR | 45.0% | |
| AACGTTTGTGTGGTCCTACT+TGG | + | chr6_1:97329953-97329972 | Msa0901070:three_prime_UTR | 45.0% | |
| GCTCTTGGGGAATCTTGCTT+CGG | - | chr6_1:97327320-97327339 | None:intergenic | 50.0% | |
| ! | GGCAGTTGATGCGTAACAGT+TGG | - | chr6_1:97328655-97328674 | None:intergenic | 50.0% |
| ! | CGACCTACAATTTGGGATGG+AGG | - | chr6_1:97328783-97328802 | None:intergenic | 50.0% |
| ! | GGACATACAATTTGGGACGG+AGG | + | chr6_1:97329033-97329052 | Msa0901070:intron | 50.0% |
| ! | GAGAAAGTGCAGTGGGCAAC+AGG | + | chr6_1:97328447-97328466 | Msa0901070:CDS | 55.0% |
| GCTATAAGGACCGCAAGGAG+AGG | + | chr6_1:97328475-97328494 | Msa0901070:CDS | 55.0% | |
| TCATCGTCAGCCTGCCACTA+AGG | - | chr6_1:97329712-97329731 | None:intergenic | 55.0% | |
| GTGGCAGGCTGACGATGATC+AGG | + | chr6_1:97329714-97329733 | Msa0901070:intron | 60.0% | |
| CAGGCTGACGATGATCAGGC+TGG | + | chr6_1:97329718-97329737 | Msa0901070:CDS | 60.0% | |
| GCTGGATCCAGTGCGCAATG+AGG | + | chr6_1:97329736-97329755 | Msa0901070:CDS | 60.0% | |
| GTGCGTACCTCATTGCGCAC+TGG | - | chr6_1:97329746-97329765 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 97327257 | 97330198 | 97327257 | ID=Msa0901070;Name=Msa0901070 |
| chr6_1 | mRNA | 97327257 | 97330198 | 97327257 | ID=Msa0901070-mRNA-1;Parent=Msa0901070;Name=Msa0901070-mRNA-1;_AED=0.20;_eAED=0.20;_QI=43|0.71|0.87|1|0.85|0.87|8|330|210 |
| chr6_1 | exon | 97327257 | 97327452 | 97327257 | ID=Msa0901070-mRNA-1:exon:17080;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97327726 | 97327848 | 97327726 | ID=Msa0901070-mRNA-1:exon:17081;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97327955 | 97328005 | 97327955 | ID=Msa0901070-mRNA-1:exon:17082;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97328180 | 97328251 | 97328180 | ID=Msa0901070-mRNA-1:exon:17083;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97328360 | 97328496 | 97328360 | ID=Msa0901070-mRNA-1:exon:17084;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97329145 | 97329199 | 97329145 | ID=Msa0901070-mRNA-1:exon:17085;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97329715 | 97329757 | 97329715 | ID=Msa0901070-mRNA-1:exon:17086;Parent=Msa0901070-mRNA-1 |
| chr6_1 | exon | 97329870 | 97330198 | 97329870 | ID=Msa0901070-mRNA-1:exon:17087;Parent=Msa0901070-mRNA-1 |
| chr6_1 | five_prime_UTR | 97327257 | 97327299 | 97327257 | ID=Msa0901070-mRNA-1:five_prime_utr;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97327300 | 97327452 | 97327300 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97327726 | 97327848 | 97327726 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97327955 | 97328005 | 97327955 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97328180 | 97328251 | 97328180 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97328360 | 97328496 | 97328360 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97329145 | 97329199 | 97329145 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | CDS | 97329715 | 97329756 | 97329715 | ID=Msa0901070-mRNA-1:cds;Parent=Msa0901070-mRNA-1 |
| chr6_1 | three_prime_UTR | 97329757 | 97329757 | 97329757 | ID=Msa0901070-mRNA-1:three_prime_utr;Parent=Msa0901070-mRNA-1 |
| chr6_1 | three_prime_UTR | 97329870 | 97330198 | 97329870 | ID=Msa0901070-mRNA-1:three_prime_utr;Parent=Msa0901070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
