AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0016260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016260 MtrunA17_Chr1g0171711 95.293 786 9 3 1 758 1 786 0.0 1540
Msa0016260 MtrunA17_Chr7g0237271 62.500 784 260 10 2 758 8 784 0.0 953
Msa0016260 MtrunA17_Chr7g0237241 61.303 783 262 9 2 758 8 775 0.0 920
Msa0016260 MtrunA17_Chr3g0138311 54.988 431 173 6 339 758 477 897 1.35e-153 469
Msa0016260 MtrunA17_Chr3g0138311 76.136 88 21 0 1 88 1 88 4.45e-39 155
Msa0016260 MtrunA17_Chr1g0148791 55.963 436 163 8 339 758 480 902 5.15e-151 463
Msa0016260 MtrunA17_Chr1g0148791 40.421 428 136 20 1 340 1 397 6.06e-56 206
Msa0016260 MtrunA17_Chr2g0282401 52.410 332 148 5 433 758 461 788 1.71e-114 364
Msa0016260 MtrunA17_Chr4g0062881 45.783 415 186 6 347 758 79 457 6.20e-108 337
Msa0016260 MtrunA17_Chr4g0047051 43.066 274 153 3 487 758 36 308 3.98e-69 229
Msa0016260 MtrunA17_Chr4g0047071 39.929 283 156 7 487 758 3 282 1.87e-58 200
Msa0016260 MtrunA17_Chr4g0047091 41.053 285 157 5 480 758 87 366 8.07e-58 201
Msa0016260 MtrunA17_Chr4g0047061 40.476 252 143 5 510 758 83 330 4.75e-51 181
Msa0016260 MtrunA17_Chr4g0047101 40.637 251 129 6 468 711 11 248 2.53e-46 166
Msa0016260 MtrunA17_Chr4g0047111 38.514 148 67 3 565 711 7 131 1.25e-27 109
Msa0016260 MtrunA17_Chr4g0062891 38.667 150 85 4 12 155 22 170 8.32e-27 108
Msa0016260 MtrunA17_Chr1g0172501 27.365 296 201 9 469 757 264 552 1.70e-25 111
Msa0016260 MtrunA17_Chr3g0093681 27.365 296 201 9 469 757 264 552 2.51e-25 111
Msa0016260 MtrunA17_Chr5g0405851 26.774 310 200 11 469 757 146 449 4.75e-23 103
Msa0016260 MtrunA17_Chr8g0352821 21.753 308 229 9 459 757 160 464 8.39e-20 94.7
Msa0016260 MtrunA17_Chr5g0401661 28.205 234 152 7 475 695 431 661 3.88e-19 92.4
Msa0016260 MtrunA17_Chr5g0401661 22.910 323 210 11 469 757 323 640 6.75e-15 78.6
Msa0016260 MtrunA17_Chr5g0401661 22.997 287 202 8 484 756 399 680 6.91e-11 65.9
Msa0016260 MtrunA17_Chr4g0067151 26.360 239 162 7 489 716 86 321 6.72e-19 88.6
Msa0016260 MtrunA17_Chr4g0067151 26.552 290 189 12 489 757 35 321 8.81e-17 82.4
Msa0016260 MtrunA17_Chr5g0401671 25.641 234 158 6 475 695 341 571 1.21e-18 90.5
Msa0016260 MtrunA17_Chr5g0401671 22.741 321 211 11 469 757 235 550 1.24e-13 74.3
Msa0016260 MtrunA17_Chr5g0401671 21.649 291 211 6 479 756 304 590 1.12e-12 71.2
Msa0016260 MtrunA17_Chr1g0163021 50.000 68 29 2 651 713 21 88 3.70e-16 75.1
Msa0016260 MtrunA17_Chr4g0053651 26.496 234 156 7 475 695 324 554 3.70e-16 82.4
Msa0016260 MtrunA17_Chr4g0053651 23.585 318 206 12 472 757 221 533 1.95e-15 80.1
Msa0016260 MtrunA17_Chr4g0053651 26.693 251 163 9 489 724 297 541 7.19e-14 75.1
Msa0016260 MtrunA17_Chr2g0281451 25.000 228 158 5 482 705 24 242 1.76e-15 80.9
Msa0016260 MtrunA17_Chr2g0281451 24.390 205 148 5 559 757 8 211 5.04e-14 76.3
Msa0016260 MtrunA17_Chr7g0253861 23.050 282 201 8 489 756 63 342 2.63e-15 78.2
Msa0016260 MtrunA17_Chr3g0136971 23.986 296 197 9 470 757 339 614 1.86e-14 77.4
Msa0016260 MtrunA17_Chr3g0136971 24.891 229 163 5 481 702 419 645 1.98e-13 73.9
Msa0016260 MtrunA17_Chr2g0283891 27.193 228 153 8 544 758 83 310 3.54e-14 74.3
Msa0016260 MtrunA17_Chr1g0185501 24.825 286 200 11 484 757 30 312 5.95e-14 73.6
Msa0016260 MtrunA17_Chr3g0099061 25.704 284 164 12 484 758 267 512 1.55e-13 73.9
Msa0016260 MtrunA17_Chr1g0168391 26.738 187 131 4 495 676 238 423 6.20e-13 72.0
Msa0016260 MtrunA17_Chr1g0197551 23.507 268 169 7 474 708 44 308 9.33e-13 72.4
Msa0016260 MtrunA17_Chr8g0392701 25.210 238 159 10 495 718 30 262 1.64e-12 69.3
Msa0016260 MtrunA17_Chr8g0392701 24.257 202 147 5 489 685 71 271 8.17e-12 67.4
Msa0016260 MtrunA17_Chr6g0448921 23.529 204 151 3 559 757 9 212 2.31e-12 70.9
Msa0016260 MtrunA17_Chr6g0448921 24.479 192 137 6 532 718 26 214 3.42e-11 67.0
Msa0016260 MtrunA17_Chr6g0448921 25.366 205 147 4 488 689 66 267 7.46e-11 65.9
Msa0016260 MtrunA17_Chr4g0035611 23.792 269 167 8 474 708 44 308 2.39e-12 70.9
Msa0016260 MtrunA17_Chr2g0331981 21.633 245 178 9 483 717 17 257 4.76e-12 69.7
Msa0016260 MtrunA17_Chr4g0059031 26.178 191 125 6 581 757 34 222 7.91e-12 68.9
Msa0016260 MtrunA17_Chr2g0295791 25.352 213 151 5 549 756 155 364 1.18e-11 67.8
Msa0016260 MtrunA17_Chr8g0383711 20.339 295 220 8 473 758 10 298 3.03e-11 65.1
Msa0016260 MtrunA17_Chr4g0004241 22.000 200 134 4 489 674 65 256 3.06e-11 67.0
Msa0016260 MtrunA17_Chr4g0004241 22.422 223 159 9 505 717 39 257 4.90e-11 66.6
Msa0016260 MtrunA17_Chr3g0095501 23.944 284 195 12 489 757 278 555 3.88e-11 66.6
Msa0016260 MtrunA17_Chr1g0200901 24.638 276 192 9 491 757 91 359 4.21e-11 65.9
Msa0016260 MtrunA17_Chr1g0200901 24.911 281 187 9 489 756 131 400 4.94e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0016260 AT2G32700.6 70.849 789 195 11 1 758 1 785 0.0 1071
Msa0016260 AT2G32700.2 70.670 791 195 12 1 758 1 787 0.0 1066
Msa0016260 AT2G32700.5 70.670 791 195 12 1 758 1 787 0.0 1066
Msa0016260 AT2G32700.1 70.670 791 195 12 1 758 1 787 0.0 1066
Msa0016260 AT2G32700.4 70.670 791 195 12 1 758 1 787 0.0 1066
Msa0016260 AT2G32700.3 70.670 791 195 12 1 758 1 787 0.0 1066
Msa0016260 AT2G32700.7 69.012 810 195 13 1 758 1 806 0.0 1055
Msa0016260 AT4G32551.1 57.955 440 167 6 328 758 501 931 8.04e-169 511
Msa0016260 AT4G32551.1 77.273 88 20 0 1 88 1 88 8.13e-40 158
Msa0016260 AT4G32551.1 35.407 209 98 10 106 291 185 379 6.49e-14 76.3
Msa0016260 AT4G32551.2 57.955 440 167 6 328 758 539 969 2.36e-168 510
Msa0016260 AT4G32551.2 77.273 88 20 0 1 88 1 88 9.39e-40 158
Msa0016260 AT2G41500.1 28.214 280 187 10 487 757 261 535 5.40e-23 104
Msa0016260 AT2G41500.1 23.529 238 174 6 526 757 258 493 7.91e-12 68.9
Msa0016260 AT2G41500.1 24.873 197 141 5 489 680 347 541 8.71e-12 68.9
Msa0016260 AT2G41500.2 28.214 280 187 10 487 757 261 535 5.40e-23 104
Msa0016260 AT2G41500.2 23.529 238 174 6 526 757 258 493 7.91e-12 68.9
Msa0016260 AT2G41500.2 24.873 197 141 5 489 680 347 541 8.71e-12 68.9
Msa0016260 AT4G02730.1 26.000 300 208 10 471 758 33 330 3.00e-20 93.2
Msa0016260 AT3G49660.1 24.188 277 159 7 489 757 79 312 5.19e-18 86.3
Msa0016260 AT5G13480.1 22.368 304 222 9 462 757 107 404 2.40e-17 87.0
Msa0016260 AT5G13480.4 22.368 304 222 9 462 757 95 392 2.67e-17 86.7
Msa0016260 AT5G13480.3 22.368 304 222 9 462 757 95 392 2.68e-17 86.7
Msa0016260 AT5G13480.2 22.368 304 222 9 462 757 118 415 3.55e-17 86.3
Msa0016260 AT1G11160.2 23.171 246 179 6 465 705 2 242 3.37e-16 83.6
Msa0016260 AT1G11160.2 25.366 205 146 5 559 757 8 211 4.64e-14 76.6
Msa0016260 AT1G11160.1 23.171 246 179 6 465 705 2 242 3.44e-16 83.6
Msa0016260 AT1G11160.1 25.366 205 146 5 559 757 8 211 4.42e-14 77.0
Msa0016260 AT1G11160.4 23.171 246 179 6 465 705 2 242 4.25e-16 83.6
Msa0016260 AT1G11160.4 25.366 205 146 5 559 757 8 211 5.51e-14 76.6
Msa0016260 AT1G61210.1 26.341 205 144 5 559 757 8 211 3.86e-15 80.5
Msa0016260 AT1G61210.1 25.381 197 139 5 544 734 37 231 8.41e-11 66.2
Msa0016260 AT1G61210.2 26.341 205 144 5 559 757 8 211 4.24e-15 80.1
Msa0016260 AT1G61210.2 25.381 197 139 5 544 734 37 231 9.56e-11 66.2
Msa0016260 AT1G61210.3 26.341 205 144 5 559 757 8 211 4.48e-15 80.1
Msa0016260 AT2G33340.2 27.315 216 146 5 471 676 209 423 9.93e-15 78.2
Msa0016260 AT2G33340.1 27.315 216 146 5 471 676 209 423 9.93e-15 78.2
Msa0016260 AT2G33340.3 27.315 216 146 6 471 676 209 423 1.14e-14 77.8
Msa0016260 AT5G60940.2 22.917 336 230 12 450 758 1 334 1.53e-14 76.3
Msa0016260 AT2G43770.1 21.631 282 205 8 489 756 61 340 1.62e-14 76.3
Msa0016260 AT5G60940.1 22.769 325 223 11 461 758 103 426 4.95e-14 75.5
Msa0016260 AT5G25150.1 21.812 298 166 7 486 757 357 613 7.18e-14 75.9
Msa0016260 AT5G25150.1 29.245 212 128 7 458 649 420 629 2.65e-11 67.8
Msa0016260 AT5G25150.2 21.812 298 166 7 486 757 357 613 9.42e-14 75.5
Msa0016260 AT5G25150.2 29.245 212 128 7 458 649 420 629 3.22e-11 67.4
Msa0016260 AT5G67320.1 23.975 317 206 10 472 757 256 568 1.46e-13 74.7
Msa0016260 AT5G08390.1 24.020 204 150 3 559 757 9 212 6.66e-13 72.8
Msa0016260 AT5G08390.1 26.425 193 132 8 532 718 26 214 1.42e-11 68.6
Msa0016260 AT5G08390.1 24.490 196 143 3 489 681 67 260 2.28e-11 68.2
Msa0016260 AT3G15980.3 23.318 223 157 9 505 717 39 257 1.20e-12 72.0
Msa0016260 AT3G15980.6 23.318 223 157 9 505 717 39 257 1.20e-12 72.0
Msa0016260 AT3G15980.2 23.318 223 157 9 505 717 39 257 1.20e-12 72.0
Msa0016260 AT3G15980.4 23.318 223 157 9 505 717 39 257 1.20e-12 72.0
Msa0016260 AT3G18130.1 24.020 204 145 5 489 685 71 271 1.56e-12 70.1
Msa0016260 AT3G18130.1 24.790 238 160 9 495 718 30 262 5.44e-11 65.1
Msa0016260 AT1G48630.1 23.529 204 146 5 489 685 71 271 1.61e-12 69.7
Msa0016260 AT1G48630.1 24.051 237 163 9 495 718 30 262 9.03e-11 64.7
Msa0016260 AT3G15980.1 23.318 223 157 9 505 717 39 257 1.66e-12 71.6
Msa0016260 AT3G15980.7 23.318 223 157 9 505 717 39 257 1.68e-12 71.6
Msa0016260 AT3G15980.5 23.318 223 157 9 505 717 39 257 1.96e-12 71.6
Msa0016260 AT1G73720.1 24.080 299 183 9 467 758 249 510 2.55e-12 70.5
Msa0016260 AT1G29260.1 25.000 228 158 8 544 758 82 309 4.11e-12 68.6
Msa0016260 AT5G23430.1 24.390 205 148 5 559 757 9 212 4.20e-12 70.5
Msa0016260 AT5G23430.1 25.000 196 142 3 489 681 67 260 1.27e-11 68.9
Msa0016260 AT5G23430.3 24.390 205 148 5 559 757 9 212 4.42e-12 70.5
Msa0016260 AT5G23430.3 25.000 196 142 3 489 681 67 260 1.26e-11 68.9
Msa0016260 AT5G23430.2 24.390 205 148 5 559 757 9 212 4.42e-12 70.5
Msa0016260 AT5G23430.2 25.000 196 142 3 489 681 67 260 1.26e-11 68.9
Msa0016260 AT2G21390.1 23.846 260 162 7 482 708 52 308 1.04e-11 69.3
Msa0016260 AT1G04510.1 24.211 190 135 3 495 676 236 424 1.30e-11 68.2
Msa0016260 AT1G04510.2 24.211 190 135 3 495 676 236 424 1.38e-11 68.2
Msa0016260 AT1G52360.4 22.422 223 159 9 505 717 39 257 3.71e-11 67.4
Msa0016260 AT1G52360.4 22.000 200 134 4 489 674 65 256 4.11e-11 67.4
Msa0016260 AT1G52360.1 22.422 223 159 9 505 717 39 257 3.71e-11 67.4
Msa0016260 AT1G52360.1 22.000 200 134 4 489 674 65 256 4.11e-11 67.4
Msa0016260 AT1G52360.3 22.422 223 159 9 505 717 39 257 4.21e-11 67.0
Msa0016260 AT1G52360.3 22.000 200 134 4 489 674 65 256 4.21e-11 67.0
Msa0016260 AT1G18080.1 23.671 207 145 6 489 686 71 273 4.22e-11 65.5
Msa0016260 AT1G52360.2 22.000 200 134 4 489 674 109 300 6.05e-11 66.6
Msa0016260 AT1G52360.2 22.422 223 159 9 505 717 83 301 7.62e-11 66.2

Find 214 sgRNAs with CRISPR-Local

Find 1037 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACACTTTACAAGGAATT+AGG 0.141869 1_1:+27040868 None:intergenic
TCCAAGGGTTTGATGATTTA+TGG 0.148294 1_1:-27035734 Msa0016260:CDS
CAGGATGGCTTGGAACATTT+TGG 0.166410 1_1:-27035108 Msa0016260:CDS
TGTTTACATATATGATTATT+TGG 0.180095 1_1:-27040495 Msa0016260:CDS
AAACTATGGCGCAGAGTAAT+TGG 0.185140 1_1:-27040634 Msa0016260:exon
CCTGTGGATCCTTCAATTTA+TGG 0.198445 1_1:-27039517 Msa0016260:CDS
AGATTACTCGTAAAATAAAT+TGG 0.211663 1_1:-27027282 Msa0016260:three_prime_UTR
GGATACAAATGGAGATTATT+TGG 0.212936 1_1:-27028198 Msa0016260:CDS
GGTGATGGAAAGGACTTATT+TGG 0.218195 1_1:-27035033 Msa0016260:CDS
GCAGCCAAGCCTTTCTTTGC+AGG 0.229828 1_1:-27028706 Msa0016260:intron
AGAACAAAACTCACAGTTAA+AGG 0.231736 1_1:+27039140 None:intergenic
GAACAAATTCGCCCAGGTTT+TGG 0.251224 1_1:-27039051 Msa0016260:CDS
CTTGTCATTAGGTTGTTCTT+TGG 0.260725 1_1:-27031713 Msa0016260:intron
TTGATACAACTGTGCGGCTT+TGG 0.280722 1_1:-27031587 Msa0016260:CDS
CACCTTCTGGCCGCAGCATC+TGG 0.284735 1_1:-27028422 Msa0016260:CDS
TATTATAGAATAACCGAAAA+AGG 0.301943 1_1:-27035904 Msa0016260:intron
CTGTGGATCCTTCAATTTAT+GGG 0.314347 1_1:-27039516 Msa0016260:CDS
TTACACTTTACAAGGAATTA+GGG 0.323509 1_1:+27040869 None:intergenic
TACTCCAACCTCTTGGTTAT+CGG 0.325693 1_1:-27028065 Msa0016260:CDS
TTGAACTGAAAACGAAACTA+TGG 0.330004 1_1:-27040648 Msa0016260:exon
CCCTTCTTTGCATCTGAGCT+TGG 0.331207 1_1:+27040059 None:intergenic
GTCATGTGAGGAGGAGAATT+CGG 0.332153 1_1:+27040935 None:intergenic
GCCAAGGAGTGGACACCTTC+TGG 0.333667 1_1:-27028435 Msa0016260:CDS
GTTGCCAGCTGAGTTGAATT+TGG 0.340739 1_1:+27031618 None:intergenic
CAGGCAAATGCACTCATTAC+AGG 0.344223 1_1:-27028366 Msa0016260:intron
AGGAAAGGGCCTACATCTTC+AGG 0.354520 1_1:-27035884 Msa0016260:CDS
AATGCAATCTACTTCATCTA+AGG 0.355132 1_1:-27038806 Msa0016260:intron
TCCTATATCAGGATTAAATC+AGG 0.359023 1_1:-27039192 Msa0016260:intron
GAAACTGATTTGCACTTTGA+AGG 0.360965 1_1:+27039007 None:intergenic
CGCTATATGCCTGCAAAGAA+AGG 0.364543 1_1:+27028697 None:intergenic
GGGAGGTACATTGTGTATGC+TGG 0.368192 1_1:-27028220 Msa0016260:CDS
TGCTGTCATTTCTCTTCAGA+TGG 0.369775 1_1:-27034843 Msa0016260:CDS
GTACATGCACAAGGAAATAT+TGG 0.369935 1_1:-27038943 Msa0016260:CDS
GTTCCAATGGGAGGATGATT+AGG 0.373960 1_1:+27040034 None:intergenic
GCAATCTACTGCCACTGCTT+TGG 0.375891 1_1:-27039972 Msa0016260:CDS
TGATTCCACATTATCATCTA+AGG 0.380642 1_1:+27035074 None:intergenic
TGATACAACTGTGCGGCTTT+GGG 0.391565 1_1:-27031586 Msa0016260:CDS
AGCAGCTTTGCAGCAAATGC+AGG 0.394616 1_1:-27039714 Msa0016260:CDS
GAATCTGTAGCATGCTCGGC+AGG 0.396589 1_1:+27034994 None:intergenic
ATAACAATGAGATTCGCTTC+TGG 0.401253 1_1:-27028605 Msa0016260:CDS
GATGATTTGTTGATTTCAAA+AGG 0.402681 1_1:+27039861 None:intergenic
GTCAAGAATCTGTCAAAGTT+TGG 0.406905 1_1:-27028166 Msa0016260:CDS
TGAACTTGAGCTCCAAAACC+TGG 0.407070 1_1:+27039039 None:intergenic
CTGTCACTGGTGATTGTGCT+AGG 0.409504 1_1:+27027490 None:intergenic
ATGATAAGTCGGTAAAGATA+TGG 0.410149 1_1:-27027446 Msa0016260:CDS
GGAGGATTGCAGTCAAAGTC+TGG 0.414299 1_1:-27039490 Msa0016260:CDS
TTCACAAGTGTATGGAGATA+TGG 0.414553 1_1:-27038917 Msa0016260:CDS
GGCAACTTGCAGAATGTTGC+TGG 0.416007 1_1:-27035761 Msa0016260:CDS
TCACCAGGAGTATGAATAGA+TGG 0.426192 1_1:+27035800 None:intergenic
TCATGTGAGGAGGAGAATTC+GGG 0.428188 1_1:+27040936 None:intergenic
ATTTCCTGTACCAGTACTAT+TGG 0.429601 1_1:+27035856 None:intergenic
ACCAAGAGGTTGGAGTAACT+TGG 0.432164 1_1:+27028071 None:intergenic
ACAAAATACAATTCCCGATC+AGG 0.432300 1_1:+27040835 None:intergenic
AAAGTTTGGTCACTTGCCTC+TGG 0.432801 1_1:-27028152 Msa0016260:CDS
TTGATTTACCAGCTGGTTTG+TGG 0.439336 1_1:+27035682 None:intergenic
TAATGCCGCAGCATATTTAG+AGG 0.440510 1_1:-27040215 Msa0016260:intron
ATTGACCCATCGTTTGCAAT+TGG 0.440613 1_1:+27038838 None:intergenic
GTTGACGGTTGAGAATTAGA+AGG 0.441908 1_1:+27035824 None:intergenic
ATGTATTTCTAGGGACACTC+TGG 0.444218 1_1:-27028242 Msa0016260:intron
GCCAGAAGGTGTCCACTCCT+TGG 0.444368 1_1:+27028434 None:intergenic
ATTGCAAACGATGGGTCAAT+AGG 0.445275 1_1:-27038835 Msa0016260:CDS
AACTATGGCGCAGAGTAATT+GGG 0.449762 1_1:-27040633 Msa0016260:exon
CCTCCCTGCCCATAAATTGA+AGG 0.450930 1_1:+27039508 None:intergenic
TTGAAATCAACAAATCATCC+TGG 0.452186 1_1:-27039857 Msa0016260:CDS
GTGATGGAAAGGACTTATTT+GGG 0.454425 1_1:-27035032 Msa0016260:CDS
CATGCTACAGATTCTTCAAA+AGG 0.454429 1_1:-27034985 Msa0016260:intron
GATTACTCGTAAAATAAATT+GGG 0.458908 1_1:-27027281 Msa0016260:three_prime_UTR
ATTGGCAATTCACAAGTGTA+TGG 0.462672 1_1:-27038925 Msa0016260:CDS
CACTGCATTGGGATGGATCA+TGG 0.466854 1_1:+27040786 None:intergenic
GGATCCTTCAATTTATGGGC+AGG 0.467209 1_1:-27039512 Msa0016260:CDS
TCTGTAGTGATAGCATTTAG+AGG 0.468147 1_1:+27040007 None:intergenic
CTTCTTGTCATGTCCAGCAC+TGG 0.468790 1_1:+27034809 None:intergenic
ATGGATCAAAACACTGCATT+GGG 0.473585 1_1:+27040775 None:intergenic
CCCAAGTTACTCCAACCTCT+TGG 0.475839 1_1:-27028072 Msa0016260:CDS
ATGGATCCTCAACGATTAAG+AGG 0.479813 1_1:-27038898 Msa0016260:CDS
ACTTATTTGGGACGTTGAAA+CGG 0.485085 1_1:-27035020 Msa0016260:CDS
TAATTCCTTGTAAAGTGTAA+AGG 0.486282 1_1:-27040866 Msa0016260:five_prime_UTR
ATAATAACAGTGTGTTCCTC+TGG 0.488727 1_1:+27031660 None:intergenic
ACCATAAATCATCAAACCCT+TGG 0.489033 1_1:+27035733 None:intergenic
TACACCCTCATGAGCTGGTA+TGG 0.493721 1_1:+27027521 None:intergenic
GCCAAGCTCAGATGCAAAGA+AGG 0.495289 1_1:-27040060 Msa0016260:CDS
CTAAACAGTCAGATGGTTCA+AGG 0.495740 1_1:-27039755 Msa0016260:intron
TTCTAGCATCTAAAAGTGGT+TGG 0.500545 1_1:+27039888 None:intergenic
CTTGGTTATCGGAGGATACC+AGG 0.501060 1_1:-27028054 Msa0016260:intron
TCTAGCATCTAAAAGTGGTT+GGG 0.502456 1_1:+27039889 None:intergenic
ACTCACTCACCTACTGGATC+AGG 0.504721 1_1:+27040416 None:intergenic
GATGATGTCTCCGTATCCAT+AGG 0.507223 1_1:+27039911 None:intergenic
TCTTTGATGTTGAGACTGAC+AGG 0.507574 1_1:-27028385 Msa0016260:CDS
TGAAGAATCTGTAGCATGCT+CGG 0.510849 1_1:+27034990 None:intergenic
GCTGTCATTTCTCTTCAGAT+GGG 0.513862 1_1:-27034842 Msa0016260:CDS
CAGACCAAATTCAACTCAGC+TGG 0.516977 1_1:-27031622 Msa0016260:CDS
GGATTAAATCAGGGAGTTGG+TGG 0.517163 1_1:-27039182 Msa0016260:CDS
GTCATTTATGACAGAAGGGA+AGG 0.518397 1_1:-27040444 Msa0016260:CDS
TCAGGAGCTGCCAATAGTAC+TGG 0.519807 1_1:-27035866 Msa0016260:CDS
TTGATGATTTATGGTACTGA+AGG 0.523817 1_1:-27035725 Msa0016260:CDS
TTAGATGAAGTAGATTGCAT+TGG 0.524357 1_1:+27038808 None:intergenic
GCTAAGTCATTTATGACAGA+AGG 0.525516 1_1:-27040449 Msa0016260:CDS
GATGGATCAAAACACTGCAT+TGG 0.525610 1_1:+27040774 None:intergenic
TGCCAGATGCTGCGGCCAGA+AGG 0.525651 1_1:+27028420 None:intergenic
AAGTCTGGAATCACAAATGC+AGG 0.526168 1_1:-27039475 Msa0016260:intron
CTTTACCGACTTATCATGAC+TGG 0.527534 1_1:+27027452 None:intergenic
TCCTGGTGATGGAGTTGCTA+TGG 0.529700 1_1:-27035786 Msa0016260:CDS
TGCATCTTCCACAAACCAGC+TGG 0.530085 1_1:-27035690 Msa0016260:intron
ATGATTTGTTGATTTCAAAA+GGG 0.530464 1_1:+27039862 None:intergenic
AATCTCATTGTTATCATCAC+AGG 0.531071 1_1:+27028614 None:intergenic
GGGAAATTATTAGCCAGTGC+TGG 0.533775 1_1:-27034822 Msa0016260:CDS
CTAGCACAATCACCAGTGAC+AGG 0.536452 1_1:-27027489 Msa0016260:CDS
ACAACAACAGCTCCTTGCTC+AGG 0.536955 1_1:-27038965 Msa0016260:CDS
GAAGCAACCATCCCTGTCAC+TGG 0.538448 1_1:+27027477 None:intergenic
TGATTTGCACTTTGAAGGAG+AGG 0.539847 1_1:+27039012 None:intergenic
AAACTCTAACCCTATGGATA+CGG 0.540176 1_1:-27039921 Msa0016260:CDS
GTATGAATAGATGGAGTTGA+CGG 0.541616 1_1:+27035809 None:intergenic
TGTGTATGCTGGGATACAAA+TGG 0.541891 1_1:-27028209 Msa0016260:CDS
GCTGCCAATAGTACTGGTAC+AGG 0.543266 1_1:-27035860 Msa0016260:CDS
TGAAATCAACAAATCATCCT+GGG 0.545342 1_1:-27039856 Msa0016260:intron
ACTTACAGTCATTGGAGCTA+TGG 0.548084 1_1:-27027569 Msa0016260:intron
TTTAGAGGAGGAGTTCCAAT+GGG 0.550042 1_1:+27040022 None:intergenic
ATCACTACAGAAGGAATGCT+AGG 0.550461 1_1:-27039995 Msa0016260:CDS
TCTATTCATACTCCTGGTGA+TGG 0.551044 1_1:-27035797 Msa0016260:CDS
GTGGTCTCACATTGAAAGGA+TGG 0.551071 1_1:-27039163 Msa0016260:CDS
TCATTTCTCTCACAAGATGA+TGG 0.552374 1_1:-27035054 Msa0016260:CDS
GATCCTAATCATCCTCCCAT+TGG 0.553131 1_1:-27040037 Msa0016260:CDS
ATTTAGAGGAGGAGTTCCAA+TGG 0.557133 1_1:+27040021 None:intergenic
AGAATGAAACATGTTTCCAC+TGG 0.557652 1_1:+27028106 None:intergenic
TGGGATGGATCATGGATGGA+TGG 0.558375 1_1:+27040794 None:intergenic
GGAGGTACATTGTGTATGCT+GGG 0.558903 1_1:-27028219 Msa0016260:CDS
TTTCTTAGGGTGGAAATCAA+GGG 0.559171 1_1:+27028653 None:intergenic
TCCTCCGATAACCAAGAGGT+TGG 0.560162 1_1:+27028061 None:intergenic
TCAGGATTAAATCAGGGAGT+TGG 0.560797 1_1:-27039185 Msa0016260:intron
TATGCCTGCAAAGAAAGGCT+TGG 0.561064 1_1:+27028702 None:intergenic
TATCATCACAGGAACAGAAA+AGG 0.561084 1_1:+27028625 None:intergenic
TGTATTTCTAGGGACACTCT+GGG 0.561169 1_1:-27028241 Msa0016260:intron
ACTCCATCTATTCATACTCC+TGG 0.561698 1_1:-27035803 Msa0016260:CDS
CCAAGAGGTTGGAGTAACTT+GGG 0.561716 1_1:+27028072 None:intergenic
GAACTTGAGCTCCAAAACCT+GGG 0.565296 1_1:+27039040 None:intergenic
TATGACCATACCAGCTCATG+AGG 0.566508 1_1:-27027526 Msa0016260:CDS
GATATTACACCCTCATGAGC+TGG 0.567462 1_1:+27027516 None:intergenic
CTAAATGCTATCACTACAGA+AGG 0.567631 1_1:-27040004 Msa0016260:CDS
TTAGGTTGTTCTTTGGAACA+TGG 0.568619 1_1:-27031706 Msa0016260:intron
TGTCACTGGTGATTGTGCTA+GGG 0.568713 1_1:+27027491 None:intergenic
ACAACTAACCTCAAAACAGA+TGG 0.568987 1_1:+27040756 None:intergenic
GTCAACCAATTGCAAACGAT+GGG 0.570901 1_1:-27038843 Msa0016260:CDS
AATTGAAGGATCCACAGGTA+AGG 0.571880 1_1:+27039522 None:intergenic
CTCTCACAAGATGATGGTGA+TGG 0.571976 1_1:-27035048 Msa0016260:CDS
GTCATTGGAGCTATGGCACA+TGG 0.572018 1_1:-27027562 Msa0016260:CDS
ATTTATGGTACTGAAGGAGC+AGG 0.572820 1_1:-27035719 Msa0016260:CDS
GGCATAGAACAAATTCGCCC+AGG 0.572846 1_1:-27039057 Msa0016260:CDS
CCATAAATTGAAGGATCCAC+AGG 0.574667 1_1:+27039517 None:intergenic
TATCAAAAGCGAAGTCAACA+TGG 0.577237 1_1:-27039560 Msa0016260:CDS
CACAACATTGCCAGATGCTG+CGG 0.578567 1_1:+27028412 None:intergenic
ACAAGATGATGGTGATGGAA+AGG 0.579632 1_1:-27035043 Msa0016260:CDS
TTAAGAGGATTAGCTAGAGG+AGG 0.579927 1_1:-27038883 Msa0016260:CDS
AATTACAACTAAGTTTCAAG+TGG 0.581227 1_1:+27027232 None:intergenic
GAATGTTGCTGGTGTATCCA+AGG 0.582149 1_1:-27035750 Msa0016260:CDS
ATTCATGAACTTAATTCCAG+TGG 0.584603 1_1:-27028122 Msa0016260:CDS
ATCAAAACACTGCATTGGGA+TGG 0.586404 1_1:+27040779 None:intergenic
TTGGCAGCTCCTGAAGATGT+AGG 0.588055 1_1:+27035875 None:intergenic
GATCCTTCAATTTATGGGCA+GGG 0.588175 1_1:-27039511 Msa0016260:CDS
CTTGTGCATGTACCTGAGCA+AGG 0.588469 1_1:+27038953 None:intergenic
CACAGGTGAGGTTTCAGCCA+AGG 0.590433 1_1:-27028451 Msa0016260:CDS
CCAAGCTCAGATGCAAAGAA+GGG 0.590704 1_1:-27040059 Msa0016260:CDS
CCTATATCAGGATTAAATCA+GGG 0.591636 1_1:-27039191 Msa0016260:intron
GTTGGTGGTCTCACATTGAA+AGG 0.592499 1_1:-27039167 Msa0016260:CDS
AATGCAGCAATTGATGCTCC+TGG 0.595005 1_1:-27040310 Msa0016260:intron
TCCAACCTCTTGGTTATCGG+AGG 0.596783 1_1:-27028062 Msa0016260:CDS
GCCATAGCAACTCCATCACC+AGG 0.598806 1_1:+27035785 None:intergenic
CTAAGTCATTTATGACAGAA+GGG 0.600445 1_1:-27040448 Msa0016260:CDS
TTGACGGTTGAGAATTAGAA+GGG 0.600579 1_1:+27035825 None:intergenic
AATGTTGCTGGTGTATCCAA+GGG 0.601732 1_1:-27035749 Msa0016260:CDS
GTGAGGTTTCAGCCAAGGAG+TGG 0.601900 1_1:-27028446 Msa0016260:CDS
TATAGAACTAACTTCACTGA+AGG 0.604171 1_1:+27034890 None:intergenic
GCCATTCTAGCATCTAAAAG+TGG 0.604873 1_1:+27039884 None:intergenic
TGTTAACTGAGAGTACGAAT+CGG 0.607377 1_1:-27040965 Msa0016260:five_prime_UTR
CTTTCTTTGCAGGCATATAG+CGG 0.607957 1_1:-27028696 Msa0016260:CDS
GGTGATGGAGTTGCTATGGC+GGG 0.608534 1_1:-27035782 Msa0016260:CDS
AGTTCTATACGCAAAAGCAA+TGG 0.612132 1_1:-27034876 Msa0016260:CDS
ATGATGTCTCCGTATCCATA+GGG 0.614516 1_1:+27039912 None:intergenic
GCATTGGGATGGATCATGGA+TGG 0.616886 1_1:+27040790 None:intergenic
TGGTGATGGAGTTGCTATGG+CGG 0.619692 1_1:-27035783 Msa0016260:CDS
GCTAATCCTCTTAATCGTTG+AGG 0.619752 1_1:+27038892 None:intergenic
TTCTGCCAGTCATGATAAGT+CGG 0.620023 1_1:-27027457 Msa0016260:CDS
CAGTGCTGGACATGACAAGA+AGG 0.620953 1_1:-27034808 Msa0016260:intron
CTTGCTCAGGTACATGCACA+AGG 0.621214 1_1:-27038952 Msa0016260:CDS
CACTCGAAAAGAAAACCACC+AGG 0.623943 1_1:+27040292 None:intergenic
CGATTAAGAGGATTAGCTAG+AGG 0.624323 1_1:-27038886 Msa0016260:CDS
CCTTCAATTTATGGGCAGGG+AGG 0.628421 1_1:-27039508 Msa0016260:CDS
GAAAACGCAGAGCACGCCAG+AGG 0.631839 1_1:-27031676 Msa0016260:CDS
AGTAATCTACATCAACAACT+TGG 0.632603 1_1:+27027297 None:intergenic
ATCAAAAGCGAAGTCAACAT+GGG 0.635563 1_1:-27039559 Msa0016260:CDS
AGTCAACCAATTGCAAACGA+TGG 0.639225 1_1:-27038844 Msa0016260:CDS
TCACTACAGAAGGAATGCTA+GGG 0.640516 1_1:-27039994 Msa0016260:CDS
TCAAACACTGTCATGTGAGG+AGG 0.641378 1_1:+27040926 None:intergenic
AGAGGAGGAGTTCCAATGGG+AGG 0.644588 1_1:+27040025 None:intergenic
CTTTCAAACACTGTCATGTG+AGG 0.646035 1_1:+27040923 None:intergenic
AAGGTTTCTCCTGATCCAGT+AGG 0.649090 1_1:-27040425 Msa0016260:intron
AATCTGTAGCATGCTCGGCA+GGG 0.649746 1_1:+27034995 None:intergenic
TAGCACAATCACCAGTGACA+GGG 0.654726 1_1:-27027488 Msa0016260:CDS
GTAGTGATAGCATTTAGAGG+AGG 0.657190 1_1:+27040010 None:intergenic
ACTGGTACAGGAAATACACT+TGG 0.661183 1_1:-27035848 Msa0016260:CDS
AAGTACCTCTAAATATGCTG+CGG 0.661658 1_1:+27040210 None:intergenic
ACAATCACCAGTGACAGGGA+TGG 0.671107 1_1:-27027484 Msa0016260:CDS
TTCATGAATGCAATCACCAG+AGG 0.679527 1_1:+27028136 None:intergenic
TGGCTCCTTAGATGATAATG+TGG 0.680795 1_1:-27035079 Msa0016260:CDS
AGGGAGGATCTACACAGGTG+AGG 0.687544 1_1:-27028463 Msa0016260:CDS
CATGCAGAGATCCTTACCTG+TGG 0.696101 1_1:-27039533 Msa0016260:CDS
TTCGTACTCTCAGTTAACAG+AGG 0.698377 1_1:+27040969 None:intergenic
TATGGTACTGAAGGAGCAGG+CGG 0.702719 1_1:-27035716 Msa0016260:CDS
ATGACCATACCAGCTCATGA+GGG 0.705801 1_1:-27027525 Msa0016260:CDS
CAAGCAGGGAGGATCTACAC+AGG 0.707367 1_1:-27028468 Msa0016260:intron
CTTCGTTTGATACAACTGTG+CGG 0.708138 1_1:-27031593 Msa0016260:CDS
TTTCTAGGGACACTCTGGGG+AGG 0.715436 1_1:-27028237 Msa0016260:intron
GGTATCCTCCGATAACCAAG+AGG 0.726567 1_1:+27028057 None:intergenic
GCAGCAATTGATGCTCCTGG+TGG 0.739437 1_1:-27040307 Msa0016260:intron
GTATTTCTAGGGACACTCTG+GGG 0.781503 1_1:-27028240 Msa0016260:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAATAAAA+AGG + chr1_1:27033776-27033795 None:intergenic 0.0%
!! AATATTATTGTATAACTAAA+AGG + chr1_1:27027719-27027738 None:intergenic 10.0%
!!! AAATTTTTTCATGATTTAAA+TGG - chr1_1:27029539-27029558 Msa0016260:intron 10.0%
!!! AATTTGTTAATTTGTTAATT+GGG - chr1_1:27030946-27030965 Msa0016260:intron 10.0%
!! AAAAATACTAATAAAATTCA+AGG + chr1_1:27031045-27031064 None:intergenic 10.0%
!!! TATTTTAGTATTTTTTTCAA+CGG - chr1_1:27031151-27031170 Msa0016260:intron 10.0%
!! GTTTATTATATTATATTATG+TGG - chr1_1:27033555-27033574 Msa0016260:intron 10.0%
!! TTATTATATTATATTATGTG+GGG - chr1_1:27033557-27033576 Msa0016260:intron 10.0%
!! ATTAATCAATACAATAAATA+GGG - chr1_1:27033637-27033656 Msa0016260:intron 10.0%
!!! AAAAAATGCATATTTTTTTA+TGG + chr1_1:27034476-27034495 None:intergenic 10.0%
!! AAATATAGTATATACTATAT+AGG - chr1_1:27037046-27037065 Msa0016260:intron 10.0%
!! AAATATAGTATATACTATAT+AGG - chr1_1:27037046-27037065 Msa0016260:intron 10.0%
!! TAAATATAAATAGATATGAA+AGG + chr1_1:27039990-27040009 None:intergenic 10.0%
!! AGATAAAAAAGTTATTATTT+AGG - chr1_1:27040590-27040609 Msa0016260:intron 10.0%
!! CATAAGAATAGTAATAATAA+GGG + chr1_1:27027682-27027701 None:intergenic 15.0%
!! ACATAAGAATAGTAATAATA+AGG + chr1_1:27027683-27027702 None:intergenic 15.0%
!! ATTATTACTATTCTTATGTT+TGG - chr1_1:27027684-27027703 Msa0016260:intron 15.0%
!! TGTTTACATATATGATTATT+TGG - chr1_1:27027764-27027783 Msa0016260:intron 15.0%
!! GTAATAATATACTATACTAT+TGG - chr1_1:27028425-27028444 Msa0016260:CDS 15.0%
!!! TATTTGAAGTTGAATATATT+TGG + chr1_1:27028451-27028470 None:intergenic 15.0%
!!! TATAATCTTTTACCATTTTT+CGG - chr1_1:27028473-27028492 Msa0016260:intron 15.0%
!!! TTTTACATAAATATAAAGTG+GGG + chr1_1:27028872-27028891 None:intergenic 15.0%
!!! GTTTTACATAAATATAAAGT+GGG + chr1_1:27028873-27028892 None:intergenic 15.0%
!!! TGTTTTACATAAATATAAAG+TGG + chr1_1:27028874-27028893 None:intergenic 15.0%
!! ACTTTATATTTATGTAAAAC+AGG - chr1_1:27028873-27028892 Msa0016260:intron 15.0%
!!! TTATTTTTCTTTTACTGTTT+TGG - chr1_1:27028916-27028935 Msa0016260:intron 15.0%
!!! TATTTTTCTTTTACTGTTTT+GGG - chr1_1:27028917-27028936 Msa0016260:intron 15.0%
!!! GAATTTGTTAATTTGTTAAT+TGG - chr1_1:27030945-27030964 Msa0016260:intron 15.0%
!!! TGTGACTTTTATTTTAAATT+AGG - chr1_1:27031096-27031115 Msa0016260:intron 15.0%
!! TAGAAAATGCAAAAATAAAA+AGG + chr1_1:27032260-27032279 None:intergenic 15.0%
!! GATTAATCAATACAATAAAT+AGG - chr1_1:27033636-27033655 Msa0016260:intron 15.0%
!! GTAATATTAATTATCATATC+AGG + chr1_1:27034151-27034170 None:intergenic 15.0%
!!! CATTTGTTTTTAATATGATT+AGG - chr1_1:27034606-27034625 Msa0016260:intron 15.0%
!!! TAGAATTGAATCAATTTTAA+AGG - chr1_1:27035652-27035671 Msa0016260:intron 15.0%
!!! AGAATTGAATCAATTTTAAA+GGG - chr1_1:27035653-27035672 Msa0016260:intron 15.0%
!! TAATATTGATACATTAAGTA+TGG - chr1_1:27035689-27035708 Msa0016260:intron 15.0%
!! TACATTTATTTATGTTACAA+AGG - chr1_1:27035800-27035819 Msa0016260:CDS 15.0%
!!! TAAAAGTTTTAACAAAACTA+GGG + chr1_1:27036138-27036157 None:intergenic 15.0%
!!! TTAAAAGTTTTAACAAAACT+AGG + chr1_1:27036139-27036158 None:intergenic 15.0%
!!! TAAAACTTTTAAAAGTAACA+TGG - chr1_1:27036147-27036166 Msa0016260:intron 15.0%
!! TTTATAAGTTTAAATTGGTA+TGG + chr1_1:27036439-27036458 None:intergenic 15.0%
!! ATCTGTTTATAAGTTTAAAT+TGG + chr1_1:27036444-27036463 None:intergenic 15.0%
!! TATTCATTATATATAGTTGA+TGG - chr1_1:27037154-27037173 Msa0016260:intron 15.0%
!! AGAAAAAATATATTGTTGAT+TGG + chr1_1:27037640-27037659 None:intergenic 15.0%
!! ACTTTAGATTTATTGAAATT+CGG + chr1_1:27039933-27039952 None:intergenic 15.0%
!! TTAGAATTATATGTATTTCT+AGG - chr1_1:27040007-27040026 Msa0016260:CDS 15.0%
!!! TAGAATTATATGTATTTCTA+GGG - chr1_1:27040008-27040027 Msa0016260:CDS 15.0%
!!! AAAGTTATTATTTAGGATAT+TGG - chr1_1:27040597-27040616 Msa0016260:intron 15.0%
!!! AAAAAAAAGTGTTTTAGAAC+AGG - chr1_1:27027267-27027286 Msa0016260:three_prime_UTR 20.0%
!!! ATATTTTTTTTGTGAACTGA+AGG - chr1_1:27028119-27028138 Msa0016260:CDS 20.0%
!!! ATGATTTGTTGATTTCAAAA+GGG + chr1_1:27028400-27028419 None:intergenic 20.0%
!! TTTACATAAATATAAAGTGG+GGG + chr1_1:27028871-27028890 None:intergenic 20.0%
!!! GATTATTTGATGAAATTTTG+TGG + chr1_1:27029019-27029038 None:intergenic 20.0%
!!! AGCTTTCTTTTATCATTTTT+AGG - chr1_1:27031366-27031385 Msa0016260:intron 20.0%
!! ATGTAAAGTAGTAAGATATT+TGG - chr1_1:27031426-27031445 Msa0016260:intron 20.0%
!! TGTAAAGTAGTAAGATATTT+GGG - chr1_1:27031427-27031446 Msa0016260:intron 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + chr1_1:27031533-27031552 None:intergenic 20.0%
!! ATGTATATTTGAACATGATT+TGG - chr1_1:27031975-27031994 Msa0016260:intron 20.0%
!! TAATTTACCACATATTTGAA+CGG - chr1_1:27032146-27032165 Msa0016260:intron 20.0%
!! TATTATAGAATAACCGAAAA+AGG - chr1_1:27032355-27032374 Msa0016260:intron 20.0%
!! ATTTGATGTAAGAAATGTTA+TGG - chr1_1:27032735-27032754 Msa0016260:intron 20.0%
!!! ATAATATTCTTGATTTGCAA+AGG - chr1_1:27032996-27033015 Msa0016260:intron 20.0%
!! AAGATTCAGCTAAAAATATA+GGG + chr1_1:27033074-27033093 None:intergenic 20.0%
!! TAAGATTCAGCTAAAAATAT+AGG + chr1_1:27033075-27033094 None:intergenic 20.0%
!!! ATATTTTTAGCTGAATCTTA+TGG - chr1_1:27033075-27033094 Msa0016260:intron 20.0%
!! CGTAAATAACAAAAATCTAT+AGG + chr1_1:27033320-27033339 None:intergenic 20.0%
!!! TCTTTAATTTACTGATTTAG+AGG - chr1_1:27033489-27033508 Msa0016260:intron 20.0%
!! TAGTTAATCCTCAATTAATA+GGG - chr1_1:27033611-27033630 Msa0016260:intron 20.0%
!!! ATCTTTGATTTAGAATTCAT+TGG + chr1_1:27033740-27033759 None:intergenic 20.0%
!!! CTAAATCAAAGATCTAAAAT+TGG - chr1_1:27033747-27033766 Msa0016260:intron 20.0%
!! TAGAAAAACAAAAAGTGAAT+AGG + chr1_1:27034102-27034121 None:intergenic 20.0%
!!! TTTTTCTAATCCTTAGTTTT+TGG - chr1_1:27034114-27034133 Msa0016260:intron 20.0%
!!! CAAATTCAATTTTTTTCCAA+TGG - chr1_1:27034261-27034280 Msa0016260:intron 20.0%
!! TTTATGATTATATCTTCCAT+TGG + chr1_1:27034280-27034299 None:intergenic 20.0%
!! TTGATTCTTAATATTAACAG+AGG + chr1_1:27034868-27034887 None:intergenic 20.0%
!!! ATAATGATGAAGATTTTGAA+GGG - chr1_1:27035177-27035196 Msa0016260:intron 20.0%
!! ATTCTATCAATCTAGTAAAA+AGG + chr1_1:27035289-27035308 None:intergenic 20.0%
!!! GAATTGAATCAATTTTAAAG+GGG - chr1_1:27035654-27035673 Msa0016260:intron 20.0%
!! ATTGTTAGACAATAGAATAA+AGG + chr1_1:27035826-27035845 None:intergenic 20.0%
!!! AGGTTTAATATTTTTTAGAC+AGG + chr1_1:27035925-27035944 None:intergenic 20.0%
!! TTAACACCATCAAATAATAT+TGG - chr1_1:27036102-27036121 Msa0016260:intron 20.0%
!! AAATGAAAGTGACAAATTTA+CGG + chr1_1:27036467-27036486 None:intergenic 20.0%
!!! TTACTGTTACACTTTTTTTT+TGG - chr1_1:27036842-27036861 Msa0016260:intron 20.0%
!!! TTATGAAAACTTACTTGTTT+TGG - chr1_1:27037214-27037233 Msa0016260:intron 20.0%
!!! GAAATATAGGTTTTAGTAAA+TGG + chr1_1:27037279-27037298 None:intergenic 20.0%
!!! TTTTTCATGATGTGAAATAT+AGG + chr1_1:27037292-27037311 None:intergenic 20.0%
!! TATTTCACATCATGAAAAAA+AGG - chr1_1:27037293-27037312 Msa0016260:intron 20.0%
!!! TGAGTTGGTTTTTTTTTTAA+AGG - chr1_1:27037357-27037376 Msa0016260:intron 20.0%
!!! ATATTTTTTCTTCGATGATT+TGG - chr1_1:27037649-27037668 Msa0016260:intron 20.0%
!!! TATTTTTTCTTCGATGATTT+GGG - chr1_1:27037650-27037669 Msa0016260:intron 20.0%
!! TATTCACATTATAAATGTAG+TGG - chr1_1:27037832-27037851 Msa0016260:intron 20.0%
!!! CTTTTTTAATATTTGTCCTT+TGG - chr1_1:27039403-27039422 Msa0016260:intron 20.0%
!! ATTATAACACTAATTACCAA+AGG + chr1_1:27039422-27039441 None:intergenic 20.0%
!!! AGTTTACTACTATATTTTTC+AGG - chr1_1:27040253-27040272 Msa0016260:CDS 20.0%
!!! CAAATTTTGTTGAATTATTC+TGG - chr1_1:27040859-27040878 Msa0016260:five_prime_UTR 20.0%
!! AGATTACTCGTAAAATAAAT+TGG - chr1_1:27040977-27040996 Msa0016260:five_prime_UTR 20.0%
!! GATTACTCGTAAAATAAATT+GGG - chr1_1:27040978-27040997 Msa0016260:five_prime_UTR 20.0%
! TTACACTTTACAAGGAATTA+GGG + chr1_1:27027393-27027412 None:intergenic 25.0%
! TTTACACTTTACAAGGAATT+AGG + chr1_1:27027394-27027413 None:intergenic 25.0%
! TAATTCCTTGTAAAGTGTAA+AGG - chr1_1:27027393-27027412 Msa0016260:three_prime_UTR 25.0%
! AAAAACCTTTACACTTTACA+AGG + chr1_1:27027401-27027420 None:intergenic 25.0%
!!! ATTGATTCTTGTTTTTTGCT+AGG - chr1_1:27027736-27027755 Msa0016260:intron 25.0%
!!! GATGATTTGTTGATTTCAAA+AGG + chr1_1:27028401-27028420 None:intergenic 25.0%
! AGTATAGTATATTATTACCC+AGG + chr1_1:27028423-27028442 None:intergenic 25.0%
!!! AAAATATAGAGTACTGAGAA+AGG + chr1_1:27028639-27028658 None:intergenic 25.0%
!! TCTCAGTACTCTATATTTTA+AGG - chr1_1:27028640-27028659 Msa0016260:CDS 25.0%
! TCTGAAAGTTTGAATGAATT+TGG - chr1_1:27028840-27028859 Msa0016260:intron 25.0%
! CATCAAATAATCATCTTTCT+AGG - chr1_1:27029027-27029046 Msa0016260:intron 25.0%
!! TGATCTGGTTTAAATCAATT+AGG - chr1_1:27029180-27029199 Msa0016260:intron 25.0%
!! GATCTGGTTTAAATCAATTA+GGG - chr1_1:27029181-27029200 Msa0016260:intron 25.0%
! AAATCTAAATAGAACGTAGT+CGG + chr1_1:27029679-27029698 None:intergenic 25.0%
! TTGACTAACTTATTATCTGA+AGG + chr1_1:27029734-27029753 None:intergenic 25.0%
! TGTGTAGTGTTTATATAACT+TGG - chr1_1:27030067-27030086 Msa0016260:intron 25.0%
! GTGTAGTGTTTATATAACTT+GGG - chr1_1:27030068-27030087 Msa0016260:intron 25.0%
! TGTGTAATGTTTATAAAGCT+TGG - chr1_1:27030370-27030389 Msa0016260:intron 25.0%
! CTAGCTCAACTTTATAAAAT+CGG + chr1_1:27030415-27030434 None:intergenic 25.0%
!!! GTTAGTTGGTCTTAAAATTT+GGG + chr1_1:27030444-27030463 None:intergenic 25.0%
!!! AGTTAGTTGGTCTTAAAATT+TGG + chr1_1:27030445-27030464 None:intergenic 25.0%
! CAACTAACTAACTAACAAAA+GGG - chr1_1:27030456-27030475 Msa0016260:intron 25.0%
! ATGGAGAAGATTAAGAATTT+GGG + chr1_1:27030792-27030811 None:intergenic 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG - chr1_1:27030949-27030968 Msa0016260:intron 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - chr1_1:27031003-27031022 Msa0016260:intron 25.0%
! TGAACTTTGAGTAATGTTTA+AGG - chr1_1:27031128-27031147 Msa0016260:intron 25.0%
! AAGTATGTTTCGAAATTGTA+GGG + chr1_1:27031225-27031244 None:intergenic 25.0%
! AAAGTATGTTTCGAAATTGT+AGG + chr1_1:27031226-27031245 None:intergenic 25.0%
! TACAATTTCGAAACATACTT+TGG - chr1_1:27031225-27031244 Msa0016260:intron 25.0%
!!! CTTTGGAAATTTTTCTTTTG+TGG - chr1_1:27031242-27031261 Msa0016260:intron 25.0%
! AGAATGAAAAAAGAATGAGA+AGG - chr1_1:27031393-27031412 Msa0016260:intron 25.0%
! ATATTTGGGTAAATTGTTCT+GGG - chr1_1:27031441-27031460 Msa0016260:intron 25.0%
! AGTATATTATTCAGTGTACT+AGG - chr1_1:27031479-27031498 Msa0016260:intron 25.0%
!!! TATAACAAACACTTTAGAGT+TGG - chr1_1:27031540-27031559 Msa0016260:intron 25.0%
! GTTAATGCAATTCAAATACA+TGG - chr1_1:27031801-27031820 Msa0016260:intron 25.0%
! GATGATTAACGAATATAACA+AGG - chr1_1:27031840-27031859 Msa0016260:intron 25.0%
! TGTAGTTAATTGTGTTAAGT+GGG + chr1_1:27031885-27031904 None:intergenic 25.0%
! TTGTAGTTAATTGTGTTAAG+TGG + chr1_1:27031886-27031905 None:intergenic 25.0%
! GTATATTTGAACAAAAGTTG+TGG - chr1_1:27031915-27031934 Msa0016260:intron 25.0%
!! ATATTTGAACATGATTTGGA+TGG - chr1_1:27031979-27031998 Msa0016260:intron 25.0%
! AATACATTAATAATTCTCCC+CGG + chr1_1:27032629-27032648 None:intergenic 25.0%
! TATTTGTAAGCAACATATGT+AGG + chr1_1:27032655-27032674 None:intergenic 25.0%
! CTTACATCAAATGTTTCATT+TGG + chr1_1:27032727-27032746 None:intergenic 25.0%
! TACTCCTACTTTAATATACA+GGG + chr1_1:27032768-27032787 None:intergenic 25.0%
! ATACTCCTACTTTAATATAC+AGG + chr1_1:27032769-27032788 None:intergenic 25.0%
! TGTATATTAAAGTAGGAGTA+TGG - chr1_1:27032768-27032787 Msa0016260:intron 25.0%
!! GTATATTAAAGTAGGAGTAT+GGG - chr1_1:27032769-27032788 Msa0016260:intron 25.0%
!! TATATTAAAGTAGGAGTATG+GGG - chr1_1:27032770-27032789 Msa0016260:intron 25.0%
! AATCATTTGCCAAAAATGAA+AGG + chr1_1:27032806-27032825 None:intergenic 25.0%
!!! TTAATTGTTTTTACTCTGCA+TGG - chr1_1:27032932-27032951 Msa0016260:intron 25.0%
!!! TAATTGTTTTTACTCTGCAT+GGG - chr1_1:27032933-27032952 Msa0016260:intron 25.0%
! TTCAGTCTTAGTATAACTAT+TGG + chr1_1:27033530-27033549 None:intergenic 25.0%
! GAATGTACATTTATATAAGC+AGG - chr1_1:27033581-27033600 Msa0016260:intron 25.0%
! CTATTAATTGAGGATTAACT+AGG + chr1_1:27033612-27033631 None:intergenic 25.0%
! CTAGTTAATCCTCAATTAAT+AGG - chr1_1:27033610-27033629 Msa0016260:intron 25.0%
! TTAATCTTCCCTATTAATTG+AGG + chr1_1:27033622-27033641 None:intergenic 25.0%
! ATCAATACAATAAATAGGGA+AGG - chr1_1:27033641-27033660 Msa0016260:intron 25.0%
! AATAGGATAGGATTAGAAAT+AGG + chr1_1:27034085-27034104 None:intergenic 25.0%
! AAACAAAAAGTGAATAGGAT+AGG + chr1_1:27034097-27034116 None:intergenic 25.0%
! ACTCATATAATCTTGAAACT+AGG - chr1_1:27034194-27034213 Msa0016260:intron 25.0%
! CCTGTTACATATTATTTCAA+TGG + chr1_1:27034355-27034374 None:intergenic 25.0%
! CCATTGAAATAATATGTAAC+AGG - chr1_1:27034352-27034371 Msa0016260:intron 25.0%
! CTGTCATAAATTAGTTAAGA+CGG - chr1_1:27034708-27034727 Msa0016260:intron 25.0%
! CTTCAAAATCTTCATCATTA+TGG + chr1_1:27035178-27035197 None:intergenic 25.0%
!! CATAATGATGAAGATTTTGA+AGG - chr1_1:27035176-27035195 Msa0016260:intron 25.0%
! GATAACTTCATGTAATCAAT+TGG + chr1_1:27035222-27035241 None:intergenic 25.0%
! ATCAATCTAGTAAAAAGGAA+AGG + chr1_1:27035284-27035303 None:intergenic 25.0%
! AGTTGAAGAAAGGAAATTAT+AGG + chr1_1:27035339-27035358 None:intergenic 25.0%
!!! AGGAAATCTTTTAGTTTATG+AGG - chr1_1:27035523-27035542 Msa0016260:intron 25.0%
!! ATTGATTCAATTCTATGACA+TGG + chr1_1:27035647-27035666 None:intergenic 25.0%
! TACATTAAGTATGGTAAAGA+AGG - chr1_1:27035698-27035717 Msa0016260:CDS 25.0%
!! CAGAATATAAGGATCTTTTA+GGG + chr1_1:27036049-27036068 None:intergenic 25.0%
!! CTACTATTCTTTAGTTCATT+TGG + chr1_1:27036078-27036097 None:intergenic 25.0%
!!! AACTTTTAAAAGTAACATGG+TGG - chr1_1:27036150-27036169 Msa0016260:intron 25.0%
!!! CTTGATTATTTAAGAGCATT+AGG + chr1_1:27036201-27036220 None:intergenic 25.0%
! TAATCAAGAATATATTCCAC+AGG - chr1_1:27036213-27036232 Msa0016260:intron 25.0%
! CGATTTAATTCTGTATTCAT+CGG - chr1_1:27036298-27036317 Msa0016260:intron 25.0%
!!! TTTTTAAAGGTTTCTGAATC+AGG - chr1_1:27037370-27037389 Msa0016260:intron 25.0%
! AAAACTAGATGTATTACAGA+AGG + chr1_1:27037617-27037636 None:intergenic 25.0%
! AAAACTCAGATGGTAAATAA+AGG - chr1_1:27038109-27038128 Msa0016260:intron 25.0%
! AAACTCAGATGGTAAATAAA+GGG - chr1_1:27038110-27038129 Msa0016260:intron 25.0%
!! TTCCATTTGTGTAATTGTTT+TGG - chr1_1:27038987-27039006 Msa0016260:CDS 25.0%
!! TCCATTTGTGTAATTGTTTT+GGG - chr1_1:27038988-27039007 Msa0016260:CDS 25.0%
! GTAAACAGAAATTAACCAAT+TGG - chr1_1:27039259-27039278 Msa0016260:intron 25.0%
!!! GAAGTTGTAATTTTAATACG+AGG + chr1_1:27039316-27039335 None:intergenic 25.0%
! TGGATAAAACTTCTATCAAA+GGG - chr1_1:27039345-27039364 Msa0016260:intron 25.0%
! ATTAGTGTTATAATGAAACC+AGG - chr1_1:27039428-27039447 Msa0016260:intron 25.0%
!! GACGTTTCTATTTCAAATTT+TGG - chr1_1:27039491-27039510 Msa0016260:CDS 25.0%
!!! AGAAAAGGTCATTTTTCTTA+GGG + chr1_1:27039622-27039641 None:intergenic 25.0%
! CTCATTAAATTTATCAAGCA+GGG - chr1_1:27039777-27039796 Msa0016260:intron 25.0%
!!! TATGGTCATACATTTGTTTT+CGG + chr1_1:27040723-27040742 None:intergenic 25.0%
! TAAAGGTTTTTCTTCCTGAT+CGG - chr1_1:27027410-27027429 Msa0016260:three_prime_UTR 30.0%
TGAGCTGAATTGAATTGAAT+TGG + chr1_1:27027542-27027561 None:intergenic 30.0%
TTGAACTGAAAACGAAACTA+TGG - chr1_1:27027611-27027630 Msa0016260:intron 30.0%
CTAAGTCATTTATGACAGAA+GGG - chr1_1:27027811-27027830 Msa0016260:intron 30.0%
TTGAAATCAACAAATCATCC+TGG - chr1_1:27028402-27028421 Msa0016260:CDS 30.0%
TGAAATCAACAAATCATCCT+GGG - chr1_1:27028403-27028422 Msa0016260:CDS 30.0%
!! CTGCATGTTCATTTTTCATA+AGG - chr1_1:27028943-27028962 Msa0016260:intron 30.0%
TAATTCTCTTCTCCTATATC+AGG - chr1_1:27029056-27029075 Msa0016260:intron 30.0%
TCCTATATCAGGATTAAATC+AGG - chr1_1:27029067-27029086 Msa0016260:intron 30.0%
CCTATATCAGGATTAAATCA+GGG - chr1_1:27029068-27029087 Msa0016260:intron 30.0%
AGAACAAAACTCACAGTTAA+AGG + chr1_1:27029122-27029141 None:intergenic 30.0%
AACCATCAATATATCTGATC+TGG - chr1_1:27029165-27029184 Msa0016260:intron 30.0%
AACCAGATCAGATATATTGA+TGG + chr1_1:27029170-27029189 None:intergenic 30.0%
TTAGATGAAGTAGATTGCAT+TGG + chr1_1:27029454-27029473 None:intergenic 30.0%
AATGCAATCTACTTCATCTA+AGG - chr1_1:27029453-27029472 Msa0016260:intron 30.0%
! TGAACTTGATAATACTCTGA+TGG - chr1_1:27029516-27029535 Msa0016260:intron 30.0%
! ATTTTGTGGATGATCCATAT+GGG - chr1_1:27029603-27029622 Msa0016260:intron 30.0%
CTGTGAAAATATAACCCATA+TGG + chr1_1:27029620-27029639 None:intergenic 30.0%
AATCTAAATAGAACGTAGTC+GGG + chr1_1:27029678-27029697 None:intergenic 30.0%
AAGATGTAATACACACTCTA+GGG - chr1_1:27029776-27029795 Msa0016260:intron 30.0%
GGATAGCCATCTTATAATTT+GGG + chr1_1:27030141-27030160 None:intergenic 30.0%
AGGATAGCCATCTTATAATT+TGG + chr1_1:27030142-27030161 None:intergenic 30.0%
! CGATTTTATAAAGTTGAGCT+AGG - chr1_1:27030413-27030432 Msa0016260:intron 30.0%
! CCTTTTGTTAGTTAGTTAGT+TGG + chr1_1:27030458-27030477 None:intergenic 30.0%
CCAACTAACTAACTAACAAA+AGG - chr1_1:27030455-27030474 Msa0016260:intron 30.0%
AATTAACTCTCTTCATATCC+TGG + chr1_1:27030501-27030520 None:intergenic 30.0%
!! GTCAACATCTGTTTACTTTT+TGG + chr1_1:27030537-27030556 None:intergenic 30.0%
TTACTCCCATGTGTAAAATA+CGG - chr1_1:27030714-27030733 Msa0016260:intron 30.0%
!!! TTCAAACGGTTTTAAGTGAA+GGG + chr1_1:27030745-27030764 None:intergenic 30.0%
TTCACTTAAAACCGTTTGAA+GGG - chr1_1:27030745-27030764 Msa0016260:intron 30.0%
TACAAAAATGACCCTTCAAA+CGG + chr1_1:27030759-27030778 None:intergenic 30.0%
GATGGAGAAGATTAAGAATT+TGG + chr1_1:27030793-27030812 None:intergenic 30.0%
GATATTTGGGTAAATTGTTC+TGG - chr1_1:27031440-27031459 Msa0016260:intron 30.0%
AAATTCGACTACAATTCAGA+TGG - chr1_1:27031779-27031798 Msa0016260:intron 30.0%
CACAATTAACTACAATTCTC+AGG - chr1_1:27031891-27031910 Msa0016260:intron 30.0%
TTCAAATATACATGATGCTG+AGG + chr1_1:27031968-27031987 None:intergenic 30.0%
GATGGTTAACGAATATAACA+AGG + chr1_1:27032109-27032128 None:intergenic 30.0%
ATGTGGTAAATTACGTTTAG+TGG + chr1_1:27032139-27032158 None:intergenic 30.0%
TAAACTGACAACAATTTGGA+TGG + chr1_1:27032178-27032197 None:intergenic 30.0%
TAGAATAACCGAAAAAGGAA+AGG - chr1_1:27032360-27032379 Msa0016260:intron 30.0%
AGAATAACCGAAAAAGGAAA+GGG - chr1_1:27032361-27032380 Msa0016260:intron 30.0%
! TTGATGATTTATGGTACTGA+AGG - chr1_1:27032534-27032553 Msa0016260:intron 30.0%
!! ATTTTGTAACTTGCATTACC+CGG - chr1_1:27032607-27032626 Msa0016260:intron 30.0%
ATACATTAATAATTCTCCCC+GGG + chr1_1:27032628-27032647 None:intergenic 30.0%
!!! GTTCATTTTGTTTTAGTTGC+AGG - chr1_1:27033132-27033151 Msa0016260:intron 30.0%
!!! ATTTTGTTTTAGTTGCAGGA+TGG - chr1_1:27033136-27033155 Msa0016260:intron 30.0%
TGATTCCACATTATCATCTA+AGG + chr1_1:27033188-27033207 None:intergenic 30.0%
! GTTATTTACGTTGACTGTAT+AGG - chr1_1:27033330-27033349 Msa0016260:intron 30.0%
TATAGAACTAACTTCACTGA+AGG + chr1_1:27033372-27033391 None:intergenic 30.0%
TTAATTGAGGATTAACTAGG+AGG + chr1_1:27033609-27033628 None:intergenic 30.0%
AGACAATGATAAGACTGATA+TGG + chr1_1:27033950-27033969 None:intergenic 30.0%
!! TTCTAATCCTTAGTTTTTGG+TGG - chr1_1:27034117-27034136 Msa0016260:intron 30.0%
GTGTTCAAAAACTATTCAGT+AGG + chr1_1:27034173-27034192 None:intergenic 30.0%
ACCTATGTTTGTTCAATCAA+TGG - chr1_1:27034234-27034253 Msa0016260:intron 30.0%
! TCCATTGATTGAACAAACAT+AGG + chr1_1:27034238-27034257 None:intergenic 30.0%
GTATATGATTCCATCTTAAC+AGG - chr1_1:27034641-27034660 Msa0016260:intron 30.0%
! GAGTTTTTAACGCATAGAAA+AGG - chr1_1:27034683-27034702 Msa0016260:intron 30.0%
ATGTATTGTGTGACAGTATA+TGG + chr1_1:27034807-27034826 None:intergenic 30.0%
AAGATGCTATATTGTCAAGA+AGG - chr1_1:27035077-27035096 Msa0016260:CDS 30.0%
! ATCTTTTTGCAAGCATTTTG+TGG - chr1_1:27035111-27035130 Msa0016260:intron 30.0%
!! AAGATTTTGAAGGGAAAAAG+AGG - chr1_1:27035186-27035205 Msa0016260:intron 30.0%
TGAAATAACTGCCATGTAAA+TGG - chr1_1:27035374-27035393 Msa0016260:intron 30.0%
GAAATAACTGCCATGTAAAT+GGG - chr1_1:27035375-27035394 Msa0016260:intron 30.0%
ATGCCTTTACAAGTAAAAAC+CGG - chr1_1:27035463-27035482 Msa0016260:intron 30.0%
!!! ATACCGGTTTTTACTTGTAA+AGG + chr1_1:27035469-27035488 None:intergenic 30.0%
CTCTCATATAGACAATATAC+CGG + chr1_1:27035492-27035511 None:intergenic 30.0%
GGTATATTGTCTATATGAGA+GGG - chr1_1:27035491-27035510 Msa0016260:intron 30.0%
TTCTATGACATGGCAAAATA+AGG + chr1_1:27035637-27035656 None:intergenic 30.0%
!! TAGACAGGATTCTTTTGATT+TGG + chr1_1:27035910-27035929 None:intergenic 30.0%
TAACAGATTGGATTTATCTG+AGG + chr1_1:27035945-27035964 None:intergenic 30.0%
!!! TCCAATCTGTTATTTTGAAG+TGG - chr1_1:27035953-27035972 Msa0016260:intron 30.0%
TCCACTTCAAAATAACAGAT+TGG + chr1_1:27035957-27035976 None:intergenic 30.0%
!! TTTCGTTTTTACCTTGGATT+TGG + chr1_1:27035993-27036012 None:intergenic 30.0%
CTTTGAATCTACTTTGGTAA+GGG + chr1_1:27036016-27036035 None:intergenic 30.0%
! GCAGAATATAAGGATCTTTT+AGG + chr1_1:27036050-27036069 None:intergenic 30.0%
! GTGGAACTTTTATAAAACAG+AGG - chr1_1:27036169-27036188 Msa0016260:intron 30.0%
AAAGAACAACCTAATGACAA+GGG + chr1_1:27036547-27036566 None:intergenic 30.0%
!! TCTCTTTTAACTGTTAGTGT+TGG - chr1_1:27036725-27036744 Msa0016260:intron 30.0%
AGTAAACTTATAATCCCCAT+GGG + chr1_1:27036823-27036842 None:intergenic 30.0%
AAGTAAACTTATAATCCCCA+TGG + chr1_1:27036824-27036843 None:intergenic 30.0%
TTCATTTCTTACAGTGAGTA+GGG + chr1_1:27036983-27037002 None:intergenic 30.0%
ATTCATTTCTTACAGTGAGT+AGG + chr1_1:27036984-27037003 None:intergenic 30.0%
AACTCAAACTAGCCAAATAA+GGG + chr1_1:27037343-27037362 None:intergenic 30.0%
TTAAGGAAGAATTGCTTATG+TGG - chr1_1:27037443-27037462 Msa0016260:intron 30.0%
! CATTTTCAGTTGAACCTTTT+AGG - chr1_1:27037528-27037547 Msa0016260:intron 30.0%
CTTTAATGAGCAATAGTTGT+AGG - chr1_1:27037576-27037595 Msa0016260:intron 30.0%
TCACGATAAATTGACAATAG+AGG - chr1_1:27037990-27038009 Msa0016260:intron 30.0%
GAACACAAAACTAATGCATA+AGG - chr1_1:27038012-27038031 Msa0016260:intron 30.0%
! GAGCTTTTACATCAGTTTAT+GGG + chr1_1:27038065-27038084 None:intergenic 30.0%
! AGAGCTTTTACATCAGTTTA+TGG + chr1_1:27038066-27038085 None:intergenic 30.0%
TAAACTGATGTAAAAGCTCT+AGG - chr1_1:27038066-27038085 Msa0016260:intron 30.0%
AGAAATGAAGAAAACTCAGA+TGG - chr1_1:27038099-27038118 Msa0016260:intron 30.0%
AGATGGTAAATAAAGGGTTT+CGG - chr1_1:27038116-27038135 Msa0016260:intron 30.0%
! AGATTTTACCACTATCTGAT+GGG + chr1_1:27038158-27038177 None:intergenic 30.0%
! AAGATTTTACCACTATCTGA+TGG + chr1_1:27038159-27038178 None:intergenic 30.0%
! TCAGATAGTGGTAAAATCTT+TGG - chr1_1:27038159-27038178 Msa0016260:intron 30.0%
AGTGGTAAAATCTTTGGATA+TGG - chr1_1:27038165-27038184 Msa0016260:intron 30.0%
GTGGTAAAATCTTTGGATAT+GGG - chr1_1:27038166-27038185 Msa0016260:intron 30.0%
AAAAGTAGAGAGAAGTAAGA+AGG - chr1_1:27038195-27038214 Msa0016260:intron 30.0%
AAAGTAGAGAGAAGTAAGAA+GGG - chr1_1:27038196-27038215 Msa0016260:intron 30.0%
ATCTGACAAAGTTTGAAGAT+AGG - chr1_1:27038514-27038533 Msa0016260:intron 30.0%
TTAGACACAATGGTATACTA+TGG - chr1_1:27038537-27038556 Msa0016260:intron 30.0%
TCCCAAAACAATTACACAAA+TGG + chr1_1:27038992-27039011 None:intergenic 30.0%
!!! ATTTGTGTAATTGTTTTGGG+AGG - chr1_1:27038991-27039010 Msa0016260:CDS 30.0%
AACACAATATACAGATCATG+TGG + chr1_1:27039047-27039066 None:intergenic 30.0%
TATTGTGTTTACTGCATTTG+TGG - chr1_1:27039058-27039077 Msa0016260:CDS 30.0%
TTGTATTCCAAGTGTTAGTT+GGG - chr1_1:27039083-27039102 Msa0016260:intron 30.0%
AACAGAAATTAACCAATTGG+TGG - chr1_1:27039262-27039281 Msa0016260:intron 30.0%
!! TGATAGAAGTTTTATCCACT+GGG + chr1_1:27039343-27039362 None:intergenic 30.0%
!! TTGATAGAAGTTTTATCCAC+TGG + chr1_1:27039344-27039363 None:intergenic 30.0%
GTGGATAAAACTTCTATCAA+AGG - chr1_1:27039344-27039363 Msa0016260:intron 30.0%
!!! AATTTTGGTTTGCTTAAAGC+TGG - chr1_1:27039506-27039525 Msa0016260:CDS 30.0%
!!! CAGAAAAGGTCATTTTTCTT+AGG + chr1_1:27039623-27039642 None:intergenic 30.0%
AATCTCATTGTTATCATCAC+AGG + chr1_1:27039648-27039667 None:intergenic 30.0%
!! TTCTTGTACTCGTGTTTTTA+AGG - chr1_1:27039691-27039710 Msa0016260:intron 30.0%
! TTTTGCTCTCATAAATGTGA+TGG - chr1_1:27039735-27039754 Msa0016260:CDS 30.0%
CCTGCTTGATAAATTTAATG+AGG + chr1_1:27039779-27039798 None:intergenic 30.0%
CCTCATTAAATTTATCAAGC+AGG - chr1_1:27039776-27039795 Msa0016260:intron 30.0%
ATTAAATTTATCAAGCAGGG+AGG - chr1_1:27039780-27039799 Msa0016260:intron 30.0%
GGATACAAATGGAGATTATT+TGG - chr1_1:27040061-27040080 Msa0016260:CDS 30.0%
ATTCATGAACTTAATTCCAG+TGG - chr1_1:27040137-27040156 Msa0016260:intron 30.0%
ATTATAACAGAGACACTAAC+TGG + chr1_1:27040353-27040372 None:intergenic 30.0%
GATGATAAATAAGCAGTCAT+TGG + chr1_1:27040477-27040496 None:intergenic 30.0%
CAAATAAAGTAAAGCCGTAA+AGG - chr1_1:27040505-27040524 Msa0016260:intron 30.0%
AACCAGTCTATATTCCTTTA+CGG + chr1_1:27040522-27040541 None:intergenic 30.0%
!! TTCACATATTAGCTTGCATT+TGG - chr1_1:27040552-27040571 Msa0016260:intron 30.0%
ATGATAAGTCGGTAAAGATA+TGG - chr1_1:27040813-27040832 Msa0016260:five_prime_UTR 30.0%
AGTAATCTACATCAACAACT+TGG + chr1_1:27040965-27040984 None:intergenic 30.0%
! TGTTAACTGAGAGTACGAAT+CGG - chr1_1:27027294-27027313 Msa0016260:three_prime_UTR 35.0%
! AAAGGTTTTTCTTCCTGATC+GGG - chr1_1:27027411-27027430 Msa0016260:three_prime_UTR 35.0%
ACAAAATACAATTCCCGATC+AGG + chr1_1:27027427-27027446 None:intergenic 35.0%
ATGGATCAAAACACTGCATT+GGG + chr1_1:27027487-27027506 None:intergenic 35.0%
!! GTTTTGATCCATCTGTTTTG+AGG - chr1_1:27027495-27027514 Msa0016260:CDS 35.0%
ACAACTAACCTCAAAACAGA+TGG + chr1_1:27027506-27027525 None:intergenic 35.0%
!!! ATCTGTTTTGAGGTTAGTTG+TGG - chr1_1:27027505-27027524 Msa0016260:CDS 35.0%
GCTAAGTCATTTATGACAGA+AGG - chr1_1:27027810-27027829 Msa0016260:intron 35.0%
AAGTACCTCTAAATATGCTG+CGG + chr1_1:27028052-27028071 None:intergenic 35.0%
TTAAAGCGAAACGAAGAGTA+GGG + chr1_1:27028075-27028094 None:intergenic 35.0%
ATTAAAGCGAAACGAAGAGT+AGG + chr1_1:27028076-27028095 None:intergenic 35.0%
TCTGTAGTGATAGCATTTAG+AGG + chr1_1:27028255-27028274 None:intergenic 35.0%
CTAAATGCTATCACTACAGA+AGG - chr1_1:27028255-27028274 Msa0016260:intron 35.0%
TTTGGCTGCAAAAATGTATG+AGG - chr1_1:27028305-27028324 Msa0016260:intron 35.0%
CTGCAAAAATGTATGAGGAT+CGG - chr1_1:27028310-27028329 Msa0016260:intron 35.0%
GATGAAAAACTCTAACCCTA+TGG - chr1_1:27028332-27028351 Msa0016260:intron 35.0%
AAACTCTAACCCTATGGATA+CGG - chr1_1:27028338-27028357 Msa0016260:intron 35.0%
TCTAGCATCTAAAAGTGGTT+GGG + chr1_1:27028373-27028392 None:intergenic 35.0%
TTCTAGCATCTAAAAGTGGT+TGG + chr1_1:27028374-27028393 None:intergenic 35.0%
!! ACCACTTTTAGATGCTAGAA+TGG - chr1_1:27028374-27028393 Msa0016260:CDS 35.0%
AACCAACAGAAACACATACA+GGG + chr1_1:27028587-27028606 None:intergenic 35.0%
!! TATAGAGTACTGAGAAAGGA+AGG + chr1_1:27028635-27028654 None:intergenic 35.0%
! CATCTCTAAATTTTCCTCCT+CGG - chr1_1:27028671-27028690 Msa0016260:CDS 35.0%
TATCAAAAGCGAAGTCAACA+TGG - chr1_1:27028699-27028718 Msa0016260:CDS 35.0%
ATCAAAAGCGAAGTCAACAT+GGG - chr1_1:27028700-27028719 Msa0016260:CDS 35.0%
CTGTGGATCCTTCAATTTAT+GGG - chr1_1:27028743-27028762 Msa0016260:intron 35.0%
AAATGCAGGTTAGAACTACT+GGG - chr1_1:27028798-27028817 Msa0016260:intron 35.0%
CCCTGATTTAATCCTGATAT+AGG + chr1_1:27029071-27029090 None:intergenic 35.0%
!! GAAACTGATTTGCACTTTGA+AGG + chr1_1:27029255-27029274 None:intergenic 35.0%
GTACATGCACAAGGAAATAT+TGG - chr1_1:27029316-27029335 Msa0016260:intron 35.0%
ATTGGCAATTCACAAGTGTA+TGG - chr1_1:27029334-27029353 Msa0016260:intron 35.0%
TTCACAAGTGTATGGAGATA+TGG - chr1_1:27029342-27029361 Msa0016260:intron 35.0%
CACAAAATCATTCAATGCTC+AGG + chr1_1:27029591-27029610 None:intergenic 35.0%
!!! CTGAGCATTGAATGATTTTG+TGG - chr1_1:27029589-27029608 Msa0016260:intron 35.0%
! GATTTTGTGGATGATCCATA+TGG - chr1_1:27029602-27029621 Msa0016260:intron 35.0%
GTGAAAGAATAGTCAAGTAG+GGG + chr1_1:27029656-27029675 None:intergenic 35.0%
GGTGAAAGAATAGTCAAGTA+GGG + chr1_1:27029657-27029676 None:intergenic 35.0%
GAAGATGTAATACACACTCT+AGG - chr1_1:27029775-27029794 Msa0016260:intron 35.0%
TAAGATTAGTGGGAGAGATT+GGG + chr1_1:27029816-27029835 None:intergenic 35.0%
TTAAGATTAGTGGGAGAGAT+TGG + chr1_1:27029817-27029836 None:intergenic 35.0%
GGGTAGAAGTTAAGATTAGT+GGG + chr1_1:27029826-27029845 None:intergenic 35.0%
CAAGGAGGAATAAATAGAAG+GGG + chr1_1:27029846-27029865 None:intergenic 35.0%
GCAAGGAGGAATAAATAGAA+GGG + chr1_1:27029847-27029866 None:intergenic 35.0%
AGCAAGGAGGAATAAATAGA+AGG + chr1_1:27029848-27029867 None:intergenic 35.0%
GTTAGGAGTCAAGAATGTTA+GGG + chr1_1:27029884-27029903 None:intergenic 35.0%
! GGTTAGTTAGTTAGATGGTT+AGG + chr1_1:27029901-27029920 None:intergenic 35.0%
! CAGTTGGTTAGTTAGTTAGA+TGG + chr1_1:27029906-27029925 None:intergenic 35.0%
CTAACTAACTAACCAACTGT+TGG - chr1_1:27029907-27029926 Msa0016260:intron 35.0%
AGGATTGAATTTCCAACAGT+TGG + chr1_1:27029922-27029941 None:intergenic 35.0%
TGGAAATTCAATCCTCATTG+CGG - chr1_1:27029927-27029946 Msa0016260:intron 35.0%
CTAAGTCAACCTTACAAAAC+CGG + chr1_1:27030112-27030131 None:intergenic 35.0%
GTCGAACCCAAATTATAAGA+TGG - chr1_1:27030132-27030151 Msa0016260:intron 35.0%
TTCATTGTGTTAGGTGTGAA+GGG - chr1_1:27030313-27030332 Msa0016260:intron 35.0%
ATTACACAGACCATATCTCT+AGG + chr1_1:27030358-27030377 None:intergenic 35.0%
!! AAAATCGGCTTGTAAAGTGA+AGG + chr1_1:27030400-27030419 None:intergenic 35.0%
!! GTTGGTCTTAAAATTTGGGT+TGG + chr1_1:27030440-27030459 None:intergenic 35.0%
TACTCCCATGTGTAAAATAC+GGG - chr1_1:27030715-27030734 Msa0016260:intron 35.0%
! CAATCCCGTATTTTACACAT+GGG + chr1_1:27030722-27030741 None:intergenic 35.0%
!!! CTTCAAACGGTTTTAAGTGA+AGG + chr1_1:27030746-27030765 None:intergenic 35.0%
CTTCACTTAAAACCGTTTGA+AGG - chr1_1:27030744-27030763 Msa0016260:intron 35.0%
!!! TGTGTCGTTTTGACACAAAA+TGG - chr1_1:27031749-27031768 Msa0016260:intron 35.0%
AGTTAATTGTGTTAAGTGGG+CGG + chr1_1:27031882-27031901 None:intergenic 35.0%
TCGTGGTTAATTATGTTCAG+TGG - chr1_1:27032061-27032080 Msa0016260:intron 35.0%
CGTGGTTAATTATGTTCAGT+GGG - chr1_1:27032062-27032081 Msa0016260:intron 35.0%
GTGGTTAATTATGTTCAGTG+GGG - chr1_1:27032063-27032082 Msa0016260:intron 35.0%
TTAATTATGTTCAGTGGGGA+TGG - chr1_1:27032067-27032086 Msa0016260:intron 35.0%
! AATTACGTTTAGTGGATGAC+TGG + chr1_1:27032131-27032150 None:intergenic 35.0%
CAGCTAAACTGACAACAATT+TGG + chr1_1:27032182-27032201 None:intergenic 35.0%
GTGTAAGAAAATCACGCAAA+TGG + chr1_1:27032311-27032330 None:intergenic 35.0%
ATTTCCTGTACCAGTACTAT+TGG + chr1_1:27032406-27032425 None:intergenic 35.0%
TTGACGGTTGAGAATTAGAA+GGG + chr1_1:27032437-27032456 None:intergenic 35.0%
GTATGAATAGATGGAGTTGA+CGG + chr1_1:27032453-27032472 None:intergenic 35.0%
! TCCAAGGGTTTGATGATTTA+TGG - chr1_1:27032525-27032544 Msa0016260:intron 35.0%
ACCATAAATCATCAAACCCT+TGG + chr1_1:27032529-27032548 None:intergenic 35.0%
!! ATACAAGTTGATTTACCAGC+TGG + chr1_1:27032587-27032606 None:intergenic 35.0%
!! TTTTGTAACTTGCATTACCC+GGG - chr1_1:27032608-27032627 Msa0016260:intron 35.0%
ACCACCCTGTATATTAAAGT+AGG - chr1_1:27032761-27032780 Msa0016260:intron 35.0%
TCCTACTTTAATATACAGGG+TGG + chr1_1:27032765-27032784 None:intergenic 35.0%
! TACCCAATGCCTTTCATTTT+TGG - chr1_1:27032794-27032813 Msa0016260:intron 35.0%
!! TGCCAAAAATGAAAGGCATT+GGG + chr1_1:27032799-27032818 None:intergenic 35.0%
! TTGCCAAAAATGAAAGGCAT+TGG + chr1_1:27032800-27032819 None:intergenic 35.0%
CTAACATTATAGATACGAGC+AGG + chr1_1:27032845-27032864 None:intergenic 35.0%
CTGCTCGTATCTATAATGTT+AGG - chr1_1:27032843-27032862 Msa0016260:intron 35.0%
!! TTGGAACATTTTGGAGATGT+TGG - chr1_1:27033160-27033179 Msa0016260:intron 35.0%
TCATTTCTCTCACAAGATGA+TGG - chr1_1:27033205-27033224 Msa0016260:intron 35.0%
! GTGATGGAAAGGACTTATTT+GGG - chr1_1:27033227-27033246 Msa0016260:intron 35.0%
! ACTTATTTGGGACGTTGAAA+CGG - chr1_1:27033239-27033258 Msa0016260:intron 35.0%
CATGCTACAGATTCTTCAAA+AGG - chr1_1:27033274-27033293 Msa0016260:intron 35.0%
AGTTCTATACGCAAAAGCAA+TGG - chr1_1:27033383-27033402 Msa0016260:intron 35.0%
ATCATTGTCTGCTCCTATTA+CGG - chr1_1:27033960-27033979 Msa0016260:intron 35.0%
CAGATTGAATAAGGATAGGA+TGG + chr1_1:27034027-27034046 None:intergenic 35.0%
CATCCTATCCTTATTCAATC+TGG - chr1_1:27034025-27034044 Msa0016260:intron 35.0%
ACACCAGATTGAATAAGGAT+AGG + chr1_1:27034031-27034050 None:intergenic 35.0%
TCCTTATTCAATCTGGTGTT+TGG - chr1_1:27034032-27034051 Msa0016260:intron 35.0%
ACCAAACACCAGATTGAATA+AGG + chr1_1:27034036-27034055 None:intergenic 35.0%
TGCTAAACCACCAAAAACTA+AGG + chr1_1:27034127-27034146 None:intergenic 35.0%
! TATGATTAGGTTGTACTGCT+TGG - chr1_1:27034619-27034638 Msa0016260:intron 35.0%
TTAGTTAAGACGGTAGAACA+CGG - chr1_1:27034718-27034737 Msa0016260:intron 35.0%
ACAGTATATGGTACCAAAGA+AGG + chr1_1:27034795-27034814 None:intergenic 35.0%
GTTCAGAAAAACACTTGACT+TGG + chr1_1:27035014-27035033 None:intergenic 35.0%
!! GTTGATTCTTTTGTTCTCCT+AGG - chr1_1:27035146-27035165 Msa0016260:intron 35.0%
CATCATTATGGATTTAGCCT+AGG + chr1_1:27035166-27035185 None:intergenic 35.0%
TACATGAAGTTATCGTACTG+TGG - chr1_1:27035228-27035247 Msa0016260:intron 35.0%
ACATGAAGTTATCGTACTGT+GGG - chr1_1:27035229-27035248 Msa0016260:intron 35.0%
GAGTGACTTTAGTTGAAGAA+AGG + chr1_1:27035349-27035368 None:intergenic 35.0%
CTTTACCAACTTCGATTACT+TGG - chr1_1:27035398-27035417 Msa0016260:intron 35.0%
TCAATCCAAGTAATCGAAGT+TGG + chr1_1:27035406-27035425 None:intergenic 35.0%
TACAAGTAAAAACCGGTATC+CGG - chr1_1:27035470-27035489 Msa0016260:intron 35.0%
ATAGACAATATACCGGATAC+CGG + chr1_1:27035485-27035504 None:intergenic 35.0%
CGGTATATTGTCTATATGAG+AGG - chr1_1:27035490-27035509 Msa0016260:intron 35.0%
! ATATGAGAGGGATGTTTTCT+AGG - chr1_1:27035503-27035522 Msa0016260:intron 35.0%
TATGAGGATTGTGCAGAAAT+AGG - chr1_1:27035539-27035558 Msa0016260:intron 35.0%
!!! ACATGACCATTTTTGAAGCA+TGG - chr1_1:27035573-27035592 Msa0016260:intron 35.0%
CTGTATCCATGCTTCAAAAA+TGG + chr1_1:27035582-27035601 None:intergenic 35.0%
!! TAAGGGTTTCGTTTTTACCT+TGG + chr1_1:27035999-27036018 None:intergenic 35.0%
CCTTTGAATCTACTTTGGTA+AGG + chr1_1:27036017-27036036 None:intergenic 35.0%
CCTTACCAAAGTAGATTCAA+AGG - chr1_1:27036014-27036033 Msa0016260:intron 35.0%
ACCAAAGTAGATTCAAAGGA+AGG - chr1_1:27036018-27036037 Msa0016260:intron 35.0%
CCAAAGTAGATTCAAAGGAA+GGG - chr1_1:27036019-27036038 Msa0016260:intron 35.0%
! TTTGGTGACAGCAGAATATA+AGG + chr1_1:27036060-27036079 None:intergenic 35.0%
GTGAGGCCAATATTATTTGA+TGG + chr1_1:27036111-27036130 None:intergenic 35.0%
ATTCTGTATTCATCGGATGT+TGG - chr1_1:27036305-27036324 Msa0016260:intron 35.0%
GGATACTAGAAGTAAACTTC+TGG + chr1_1:27036367-27036386 None:intergenic 35.0%
GTTTACTTCTAGTATCCGTA+TGG - chr1_1:27036370-27036389 Msa0016260:intron 35.0%
TTCTAGTATCCGTATGGTAT+GGG - chr1_1:27036376-27036395 Msa0016260:intron 35.0%
AAACTGGAGTGAATGATTCA+TGG - chr1_1:27036404-27036423 Msa0016260:intron 35.0%
AACTGGAGTGAATGATTCAT+GGG - chr1_1:27036405-27036424 Msa0016260:intron 35.0%
TTATCCTATCCCTTGTCATT+AGG - chr1_1:27036535-27036554 Msa0016260:intron 35.0%
CAAAGAACAACCTAATGACA+AGG + chr1_1:27036548-27036567 None:intergenic 35.0%
! CTTGTCATTAGGTTGTTCTT+TGG - chr1_1:27036546-27036565 Msa0016260:intron 35.0%
!! TTAGGTTGTTCTTTGGAACA+TGG - chr1_1:27036553-27036572 Msa0016260:intron 35.0%
ATAATAACAGTGTGTTCCTC+TGG + chr1_1:27036602-27036621 None:intergenic 35.0%
TGTTATAATCCCGTATACAC+AGG + chr1_1:27036766-27036785 None:intergenic 35.0%
! ATTCAATTTTCTCTTCCCCA+TGG - chr1_1:27036804-27036823 Msa0016260:intron 35.0%
! TTCAATTTTCTCTTCCCCAT+GGG - chr1_1:27036805-27036824 Msa0016260:intron 35.0%
GTAAACTTATAATCCCCATG+GGG + chr1_1:27036822-27036841 None:intergenic 35.0%
AGTATACCTGTCTTATGTTG+TGG - chr1_1:27036878-27036897 Msa0016260:intron 35.0%
GTATACCTGTCTTATGTTGT+GGG - chr1_1:27036879-27036898 Msa0016260:intron 35.0%
AATGAATGCCAGTATTGTCT+AGG - chr1_1:27036997-27037016 Msa0016260:intron 35.0%
TCATGCAATTCACCCTTATT+TGG - chr1_1:27037328-27037347 Msa0016260:intron 35.0%
CAACTCAAACTAGCCAAATA+AGG + chr1_1:27037344-27037363 None:intergenic 35.0%
!! CTTATTTGGCTAGTTTGAGT+TGG - chr1_1:27037342-27037361 Msa0016260:intron 35.0%
TAAAGGTTTCTGAATCAGGT+AGG - chr1_1:27037374-27037393 Msa0016260:intron 35.0%
TTTGGGCATAATCCCAATAA+AGG - chr1_1:27037405-27037424 Msa0016260:intron 35.0%
TTGGGCATAATCCCAATAAA+GGG - chr1_1:27037406-27037425 Msa0016260:intron 35.0%
!! TTCAGTTGAACCTTTTAGGT+TGG - chr1_1:27037532-27037551 Msa0016260:intron 35.0%
!!! TCAGTTGAACCTTTTAGGTT+GGG - chr1_1:27037533-27037552 Msa0016260:intron 35.0%
AATAGTTGTAGGTTTACCGA+GGG - chr1_1:27037587-27037606 Msa0016260:intron 35.0%
TATTACAGAAGGAAATCCCT+CGG + chr1_1:27037606-27037625 None:intergenic 35.0%
TATCAATTGTTCCAACATGC+CGG - chr1_1:27037677-27037696 Msa0016260:intron 35.0%
! TCCTCAATCTTTGATAACAC+TGG + chr1_1:27037716-27037735 None:intergenic 35.0%
TATCAAAGATTGAGGACATG+TGG - chr1_1:27037720-27037739 Msa0016260:intron 35.0%
ATCAAAGATTGAGGACATGT+GGG - chr1_1:27037721-27037740 Msa0016260:intron 35.0%
GTGCATCAACAGGATATTAT+GGG - chr1_1:27037752-27037771 Msa0016260:intron 35.0%
CAAAAAACCTTTCAGCTCTA+GGG + chr1_1:27037799-27037818 None:intergenic 35.0%
TCAAAAAACCTTTCAGCTCT+AGG + chr1_1:27037800-27037819 None:intergenic 35.0%
AAAACTAATGCATAAGGTCC+AGG - chr1_1:27038018-27038037 Msa0016260:intron 35.0%
TTGGCAAACATCTGATGTTT+CGG - chr1_1:27038219-27038238 Msa0016260:intron 35.0%
ACCATATGCACTAGAATTGT+CGG - chr1_1:27038299-27038318 Msa0016260:intron 35.0%
TGAAGATAGGTTAGACACAA+TGG - chr1_1:27038527-27038546 Msa0016260:intron 35.0%
ACAATGGTATACTATGGTGT+AGG - chr1_1:27038543-27038562 Msa0016260:intron 35.0%
TTACTCTATAACTCTCACCT+GGG + chr1_1:27038662-27038681 None:intergenic 35.0%
TTTACTCTATAACTCTCACC+TGG + chr1_1:27038663-27038682 None:intergenic 35.0%
ATTGGAGACAGAATCAACAT+GGG + chr1_1:27038713-27038732 None:intergenic 35.0%
TATTGGAGACAGAATCAACA+TGG + chr1_1:27038714-27038733 None:intergenic 35.0%
TTTGTGAATGGCATTGTTGA+GGG - chr1_1:27038902-27038921 Msa0016260:CDS 35.0%
ACAAGTGAATAACCAGAAAG+AGG - chr1_1:27038944-27038963 Msa0016260:CDS 35.0%
!! TCATGGGTTTGGTGTTAAAA+TGG - chr1_1:27039019-27039038 Msa0016260:CDS 35.0%
CTTGTATTCCAAGTGTTAGT+TGG - chr1_1:27039082-27039101 Msa0016260:intron 35.0%
AGGAAGAACTCAATAATTGC+AGG - chr1_1:27039137-27039156 Msa0016260:intron 35.0%
TGCAGGTTTGAAAGTTATGA+TGG - chr1_1:27039154-27039173 Msa0016260:CDS 35.0%
AAAGTTATGATGGCACAGAT+TGG - chr1_1:27039164-27039183 Msa0016260:CDS 35.0%
AAGTTATGATGGCACAGATT+GGG - chr1_1:27039165-27039184 Msa0016260:CDS 35.0%
!! ATTAACCAATTGGTGGTGTA+AGG - chr1_1:27039269-27039288 Msa0016260:intron 35.0%
ATTACAACTTCATATCCCAG+TGG - chr1_1:27039325-27039344 Msa0016260:intron 35.0%
AAACGTCATACTATTGTCCA+AGG + chr1_1:27039478-27039497 None:intergenic 35.0%
TTTCTTAGGGTGGAAATCAA+GGG + chr1_1:27039609-27039628 None:intergenic 35.0%
! TTTTCTTAGGGTGGAAATCA+AGG + chr1_1:27039610-27039629 None:intergenic 35.0%
!!! AAAGGTCATTTTTCTTAGGG+TGG + chr1_1:27039619-27039638 None:intergenic 35.0%
TATCATCACAGGAACAGAAA+AGG + chr1_1:27039637-27039656 None:intergenic 35.0%
ATAACAATGAGATTCGCTTC+TGG - chr1_1:27039654-27039673 Msa0016260:intron 35.0%
ACTCATTACAGGTGTAAACA+AGG - chr1_1:27039904-27039923 Msa0016260:CDS 35.0%
GTCAAGAATCTGTCAAAGTT+TGG - chr1_1:27040093-27040112 Msa0016260:CDS 35.0%
AGAATGAAACATGTTTCCAC+TGG + chr1_1:27040156-27040175 None:intergenic 35.0%
GGGTTAAGCAATGTAATCAT+TGG + chr1_1:27040425-27040444 None:intergenic 35.0%
TAAATAAGCAGTCATTGGCA+GGG + chr1_1:27040472-27040491 None:intergenic 35.0%
ATAAATAAGCAGTCATTGGC+AGG + chr1_1:27040473-27040492 None:intergenic 35.0%
! CATTGATGACTTACAGTCAT+TGG - chr1_1:27040682-27040701 Msa0016260:intron 35.0%
! AAATAAAAAGTGCGACGCTT+GGG - chr1_1:27040836-27040855 Msa0016260:five_prime_UTR 35.0%
TTCGTACTCTCAGTTAACAG+AGG + chr1_1:27027293-27027312 None:intergenic 40.0%
CTTTCAAACACTGTCATGTG+AGG + chr1_1:27027339-27027358 None:intergenic 40.0%
ATCAAAACACTGCATTGGGA+TGG + chr1_1:27027483-27027502 None:intergenic 40.0%
GATGGATCAAAACACTGCAT+TGG + chr1_1:27027488-27027507 None:intergenic 40.0%
AAACTATGGCGCAGAGTAAT+TGG - chr1_1:27027625-27027644 Msa0016260:intron 40.0%
AACTATGGCGCAGAGTAATT+GGG - chr1_1:27027626-27027645 Msa0016260:intron 40.0%
GTCATTTATGACAGAAGGGA+AGG - chr1_1:27027815-27027834 Msa0016260:intron 40.0%
GTGAGTGAGTGAATGACATT+TGG - chr1_1:27027864-27027883 Msa0016260:intron 40.0%
TAATGCCGCAGCATATTTAG+AGG - chr1_1:27028044-27028063 Msa0016260:intron 40.0%
TTTAGAGGAGGAGTTCCAAT+GGG + chr1_1:27028240-27028259 None:intergenic 40.0%
ATTTAGAGGAGGAGTTCCAA+TGG + chr1_1:27028241-27028260 None:intergenic 40.0%
GTAGTGATAGCATTTAGAGG+AGG + chr1_1:27028252-27028271 None:intergenic 40.0%
ATCACTACAGAAGGAATGCT+AGG - chr1_1:27028264-27028283 Msa0016260:intron 40.0%
TCACTACAGAAGGAATGCTA+GGG - chr1_1:27028265-27028284 Msa0016260:intron 40.0%
ATGATGTCTCCGTATCCATA+GGG + chr1_1:27028350-27028369 None:intergenic 40.0%
GCCATTCTAGCATCTAAAAG+TGG + chr1_1:27028378-27028397 None:intergenic 40.0%
TTAGGCAAAAGGCCGAAAAA+TGG + chr1_1:27028488-27028507 None:intergenic 40.0%
CATCTGACTGTTTAGGCAAA+AGG + chr1_1:27028499-27028518 None:intergenic 40.0%
! CTTTTGCCTAAACAGTCAGA+TGG - chr1_1:27028497-27028516 Msa0016260:intron 40.0%
CTTGAACCATCTGACTGTTT+AGG + chr1_1:27028506-27028525 None:intergenic 40.0%
CTAAACAGTCAGATGGTTCA+AGG - chr1_1:27028504-27028523 Msa0016260:intron 40.0%
ACCAACAGAAACACATACAG+GGG + chr1_1:27028586-27028605 None:intergenic 40.0%
CAACCAACAGAAACACATAC+AGG + chr1_1:27028588-27028607 None:intergenic 40.0%
AATTGAAGGATCCACAGGTA+AGG + chr1_1:27028740-27028759 None:intergenic 40.0%
CCATAAATTGAAGGATCCAC+AGG + chr1_1:27028745-27028764 None:intergenic 40.0%
CCTGTGGATCCTTCAATTTA+TGG - chr1_1:27028742-27028761 Msa0016260:intron 40.0%
GATCCTTCAATTTATGGGCA+GGG - chr1_1:27028748-27028767 Msa0016260:intron 40.0%
! AAGTCTGGAATCACAAATGC+AGG - chr1_1:27028784-27028803 Msa0016260:intron 40.0%
CAAATGCAGGTTAGAACTAC+TGG - chr1_1:27028797-27028816 Msa0016260:intron 40.0%
AGGTTAGAACTACTGGGAAA+AGG - chr1_1:27028804-27028823 Msa0016260:intron 40.0%
TCAGGATTAAATCAGGGAGT+TGG - chr1_1:27029074-27029093 Msa0016260:intron 40.0%
! TGATTTGCACTTTGAAGGAG+AGG + chr1_1:27029250-27029269 None:intergenic 40.0%
! AGCTGTTGTTGTTGTTGTTG+TGG + chr1_1:27029286-27029305 None:intergenic 40.0%
ATGGATCCTCAACGATTAAG+AGG - chr1_1:27029361-27029380 Msa0016260:intron 40.0%
GCTAATCCTCTTAATCGTTG+AGG + chr1_1:27029370-27029389 None:intergenic 40.0%
!! CGATTAAGAGGATTAGCTAG+AGG - chr1_1:27029373-27029392 Msa0016260:intron 40.0%
!! TTAAGAGGATTAGCTAGAGG+AGG - chr1_1:27029376-27029395 Msa0016260:intron 40.0%
AGTCAACCAATTGCAAACGA+TGG - chr1_1:27029415-27029434 Msa0016260:intron 40.0%
GTCAACCAATTGCAAACGAT+GGG - chr1_1:27029416-27029435 Msa0016260:intron 40.0%
ATTGACCCATCGTTTGCAAT+TGG + chr1_1:27029424-27029443 None:intergenic 40.0%
ATTGCAAACGATGGGTCAAT+AGG - chr1_1:27029424-27029443 Msa0016260:intron 40.0%
TATCAAGTTCATGCACCATG+AGG + chr1_1:27029507-27029526 None:intergenic 40.0%
GGGTGAAAGAATAGTCAAGT+AGG + chr1_1:27029658-27029677 None:intergenic 40.0%
! TTATCTGAAGGCATGTTGAG+AGG + chr1_1:27029722-27029741 None:intergenic 40.0%
GGGGTAGAAGTTAAGATTAG+TGG + chr1_1:27029827-27029846 None:intergenic 40.0%
ATGTGATGCAATAAGCAAGG+AGG + chr1_1:27029861-27029880 None:intergenic 40.0%
GGTTAGGAGTCAAGAATGTT+AGG + chr1_1:27029885-27029904 None:intergenic 40.0%
TCCAACTCCTTCATTGTGTT+GGG - chr1_1:27030000-27030019 Msa0016260:intron 40.0%
!! CGGTTTTGTAAGGTTGACTT+AGG - chr1_1:27030110-27030129 Msa0016260:intron 40.0%
GCTATCCTAGATCTGTTGTA+GGG - chr1_1:27030154-27030173 Msa0016260:intron 40.0%
TGGAGATTCTGCCTTAATTG+TGG - chr1_1:27030231-27030250 Msa0016260:intron 40.0%
!! TAACACAATGAAGGTGTTCG+AGG + chr1_1:27030305-27030324 None:intergenic 40.0%
TCGAACACCTTCATTGTGTT+AGG - chr1_1:27030304-27030323 Msa0016260:intron 40.0%
CTTCACACCTAACACAATGA+AGG + chr1_1:27030314-27030333 None:intergenic 40.0%
CTTCATTGTGTTAGGTGTGA+AGG - chr1_1:27030312-27030331 Msa0016260:intron 40.0%
TCATTGTGTTAGGTGTGAAG+GGG - chr1_1:27030314-27030333 Msa0016260:intron 40.0%
ACCATATCTCTAGGCAATGT+GGG + chr1_1:27030349-27030368 None:intergenic 40.0%
TAACAAAAGGGCTATCTGAG+AGG - chr1_1:27030468-27030487 Msa0016260:intron 40.0%
TAAACAGATGTTGACAGCTC+TGG - chr1_1:27030542-27030561 Msa0016260:intron 40.0%
! GCAATCCCGTATTTTACACA+TGG + chr1_1:27030723-27030742 None:intergenic 40.0%
!! GGCTGTATATTTGGTTCTGA+TGG + chr1_1:27030811-27030830 None:intergenic 40.0%
TGTGTTTGCGGCTGTATATT+TGG + chr1_1:27030820-27030839 None:intergenic 40.0%
CGATGAAGAAGTTGTGTTTG+CGG + chr1_1:27030832-27030851 None:intergenic 40.0%
GAAGAGAGGAGAACAAAGAT+GGG + chr1_1:27030911-27030930 None:intergenic 40.0%
TGAAGAGAGGAGAACAAAGA+TGG + chr1_1:27030912-27030931 None:intergenic 40.0%
TGCAATCAAGAGATGAAGAG+AGG + chr1_1:27030925-27030944 None:intergenic 40.0%
!! GCTTTAGAGGCTTAAAGTGT+TGG - chr1_1:27031016-27031035 Msa0016260:intron 40.0%
AAATTGTAGGGACCATTTGG+TGG + chr1_1:27031213-27031232 None:intergenic 40.0%
TCGAAATTGTAGGGACCATT+TGG + chr1_1:27031216-27031235 None:intergenic 40.0%
!! GGGTAAATTGTTCTGGGTTT+TGG - chr1_1:27031447-27031466 Msa0016260:intron 40.0%
TATTCAGTGTACTAGGCTAG+TGG - chr1_1:27031486-27031505 Msa0016260:intron 40.0%
CAAAGGATCATGTTGTTGCT+GGG + chr1_1:27031680-27031699 None:intergenic 40.0%
ACACCTGAAAATCGTGCTTA+AGG - chr1_1:27032028-27032047 Msa0016260:intron 40.0%
! TGTCCTTAAGCACGATTTTC+AGG + chr1_1:27032034-27032053 None:intergenic 40.0%
CTTAAGGACATTCAAAGTCG+TGG - chr1_1:27032044-27032063 Msa0016260:intron 40.0%
GTTAACGCCGTTCAAATATG+TGG + chr1_1:27032156-27032175 None:intergenic 40.0%
! ATGTAGGCCCTTTCCTTTTT+CGG + chr1_1:27032371-27032390 None:intergenic 40.0%
ACTGGTACAGGAAATACACT+TGG - chr1_1:27032411-27032430 Msa0016260:intron 40.0%
GTTGACGGTTGAGAATTAGA+AGG + chr1_1:27032438-27032457 None:intergenic 40.0%
ACTCCATCTATTCATACTCC+TGG - chr1_1:27032456-27032475 Msa0016260:intron 40.0%
! TCACCAGGAGTATGAATAGA+TGG + chr1_1:27032462-27032481 None:intergenic 40.0%
TCTATTCATACTCCTGGTGA+TGG - chr1_1:27032462-27032481 Msa0016260:intron 40.0%
AATGTTGCTGGTGTATCCAA+GGG - chr1_1:27032510-27032529 Msa0016260:intron 40.0%
! ATTTATGGTACTGAAGGAGC+AGG - chr1_1:27032540-27032559 Msa0016260:intron 40.0%
!! TTGATTTACCAGCTGGTTTG+TGG + chr1_1:27032580-27032599 None:intergenic 40.0%
! TTTGTAACTTGCATTACCCG+GGG - chr1_1:27032609-27032628 Msa0016260:intron 40.0%
! GATACGAGCAGGAATCTTTT+CGG + chr1_1:27032834-27032853 None:intergenic 40.0%
! TGGCTCCTTAGATGATAATG+TGG - chr1_1:27033180-27033199 Msa0016260:intron 40.0%
!! ACAAGATGATGGTGATGGAA+AGG - chr1_1:27033216-27033235 Msa0016260:intron 40.0%
!! GGTGATGGAAAGGACTTATT+TGG - chr1_1:27033226-27033245 Msa0016260:intron 40.0%
TGAAGAATCTGTAGCATGCT+CGG + chr1_1:27033272-27033291 None:intergenic 40.0%
TGACTGTATAGGTCCATTTC+AGG - chr1_1:27033341-27033360 Msa0016260:intron 40.0%
ACTGAAGGAAAAGCCTGAAA+TGG + chr1_1:27033357-27033376 None:intergenic 40.0%
! TGCTGTCATTTCTCTTCAGA+TGG - chr1_1:27033416-27033435 Msa0016260:intron 40.0%
! GCTGTCATTTCTCTTCAGAT+GGG - chr1_1:27033417-27033436 Msa0016260:intron 40.0%
TCCTTATCATGTGCACCAAT+CGG + chr1_1:27033987-27034006 None:intergenic 40.0%
CAGGTTCTGCTATCATCATT+TGG - chr1_1:27034371-27034390 Msa0016260:intron 40.0%
CACTTATTCTGTCATGCGTT+TGG + chr1_1:27034564-27034583 None:intergenic 40.0%
GTCTATCCTGTCACTATAGA+AGG - chr1_1:27034583-27034602 Msa0016260:intron 40.0%
CAAATGCCTTCTATAGTGAC+AGG + chr1_1:27034592-27034611 None:intergenic 40.0%
TGATTCCATCTTAACAGGCA+TGG - chr1_1:27034646-27034665 Msa0016260:intron 40.0%
GATTCCATCTTAACAGGCAT+GGG - chr1_1:27034647-27034666 Msa0016260:intron 40.0%
TTTACCCATGCCTGTTAAGA+TGG + chr1_1:27034654-27034673 None:intergenic 40.0%
ATCTCGTGTCTATCCTTCTT+TGG - chr1_1:27034779-27034798 Msa0016260:intron 40.0%
! GTTGGTAAAGCCCATTTACA+TGG + chr1_1:27035388-27035407 None:intergenic 40.0%
TGAGCAGAAAACCAAATCCA+AGG - chr1_1:27035979-27035998 Msa0016260:intron 40.0%
CCCTTCCTTTGAATCTACTT+TGG + chr1_1:27036022-27036041 None:intergenic 40.0%
AACAAAACTAGGGAGTAGTG+AGG + chr1_1:27036128-27036147 None:intergenic 40.0%
GAATATATTCCACAGGTAGC+TGG - chr1_1:27036220-27036239 Msa0016260:intron 40.0%
CTTCTAGTATCCGTATGGTA+TGG - chr1_1:27036375-27036394 Msa0016260:intron 40.0%
TCTAGTATCCGTATGGTATG+GGG - chr1_1:27036377-27036396 Msa0016260:intron 40.0%
! GTTTTTCTCCCCATACCATA+CGG + chr1_1:27036388-27036407 None:intergenic 40.0%
TATGGTATGGGGAGAAAAAC+TGG - chr1_1:27036388-27036407 Msa0016260:intron 40.0%
ACAACCTAATGACAAGGGAT+AGG + chr1_1:27036542-27036561 None:intergenic 40.0%
CTTCGTTTGATACAACTGTG+CGG - chr1_1:27036666-27036685 Msa0016260:intron 40.0%
TACACAGGAAAGACAAGGAA+AGG + chr1_1:27036751-27036770 None:intergenic 40.0%
CCTTGTCTTTCCTGTGTATA+CGG - chr1_1:27036753-27036772 Msa0016260:intron 40.0%
CTTGTCTTTCCTGTGTATAC+GGG - chr1_1:27036754-27036773 Msa0016260:intron 40.0%
! TCAATTTTCTCTTCCCCATG+GGG - chr1_1:27036806-27036825 Msa0016260:intron 40.0%
AGTTAAGGAGTGGAGTGATA+AGG + chr1_1:27036925-27036944 None:intergenic 40.0%
AGGATATAAGGTTCGTTTGG+TGG + chr1_1:27036960-27036979 None:intergenic 40.0%
ATTTCTTACAGTGAGTAGGG+AGG + chr1_1:27036980-27036999 None:intergenic 40.0%
TGGGCATAATCCCAATAAAG+GGG - chr1_1:27037407-27037426 Msa0016260:intron 40.0%
AGAATTGCTTATGTGGCAGT+TGG - chr1_1:27037450-27037469 Msa0016260:intron 40.0%
! ATGAGTGTAGTGGAGGAAAA+TGG - chr1_1:27037486-27037505 Msa0016260:intron 40.0%
! TGTAGTGGAGGAAAATGGTA+AGG - chr1_1:27037491-27037510 Msa0016260:intron 40.0%
! GTAGTGGAGGAAAATGGTAA+GGG - chr1_1:27037492-27037511 Msa0016260:intron 40.0%
CAATAGTTGTAGGTTTACCG+AGG - chr1_1:27037586-27037605 Msa0016260:intron 40.0%
GGCATGTTGGAACAATTGAT+AGG + chr1_1:27037678-27037697 None:intergenic 40.0%
GCCAGTGTTATCAAAGATTG+AGG - chr1_1:27037712-27037731 Msa0016260:intron 40.0%
GGTGCATCAACAGGATATTA+TGG - chr1_1:27037751-27037770 Msa0016260:intron 40.0%
ATTATGGGAATGCATCCCTT+TGG - chr1_1:27037767-27037786 Msa0016260:intron 40.0%
TTATGGGAATGCATCCCTTT+GGG - chr1_1:27037768-27037787 Msa0016260:intron 40.0%
!! AAATAAAGGGTTTCGGTGTC+TGG - chr1_1:27038123-27038142 Msa0016260:intron 40.0%
GATACATTCCCATCAGATAG+TGG - chr1_1:27038147-27038166 Msa0016260:intron 40.0%
TAGAGAGAAGTAAGAAGGGT+TGG - chr1_1:27038200-27038219 Msa0016260:intron 40.0%
TCCGACAATTCTAGTGCATA+TGG + chr1_1:27038303-27038322 None:intergenic 40.0%
!! TAGGGTTCTGATTTGGGTAT+GGG + chr1_1:27038380-27038399 None:intergenic 40.0%
! AGTGTCTAGGGTTCTGATTT+GGG + chr1_1:27038386-27038405 None:intergenic 40.0%
! TAGTGTCTAGGGTTCTGATT+TGG + chr1_1:27038387-27038406 None:intergenic 40.0%
TGAGGTTGAACAGTTCATCA+TGG - chr1_1:27038476-27038495 Msa0016260:intron 40.0%
GAGGTTGAACAGTTCATCAT+GGG - chr1_1:27038477-27038496 Msa0016260:intron 40.0%
CCTTTACTTTCTGAGCACAT+GGG + chr1_1:27038609-27038628 None:intergenic 40.0%
ACCTTTACTTTCTGAGCACA+TGG + chr1_1:27038610-27038629 None:intergenic 40.0%
TATAACTCTCACCTGGGTTT+GGG + chr1_1:27038656-27038675 None:intergenic 40.0%
TTGGAGACAGAATCAACATG+GGG + chr1_1:27038712-27038731 None:intergenic 40.0%
ATTCCCACTACAATTCTGAC+CGG - chr1_1:27038747-27038766 Msa0016260:intron 40.0%
GTCTTTGTTGCTGCAATCTA+TGG - chr1_1:27038780-27038799 Msa0016260:intron 40.0%
CATAGGATGTACACACCAAA+GGG + chr1_1:27038862-27038881 None:intergenic 40.0%
TCATAGGATGTACACACCAA+AGG + chr1_1:27038863-27038882 None:intergenic 40.0%
!! CACAAACTGTGCTGCTTAAA+GGG + chr1_1:27038888-27038907 None:intergenic 40.0%
!! TCACAAACTGTGCTGCTTAA+AGG + chr1_1:27038889-27038908 None:intergenic 40.0%
TAAGCAGCACAGTTTGTGAA+TGG - chr1_1:27038890-27038909 Msa0016260:CDS 40.0%
GTTTGTGAATGGCATTGTTG+AGG - chr1_1:27038901-27038920 Msa0016260:CDS 40.0%
CAAAACGTACAACCTCTTTC+TGG + chr1_1:27038959-27038978 None:intergenic 40.0%
!!! TGTTTTGGGAGGAAAGTTCA+TGG - chr1_1:27039002-27039021 Msa0016260:CDS 40.0%
!!! GTTTTGGGAGGAAAGTTCAT+GGG - chr1_1:27039003-27039022 Msa0016260:CDS 40.0%
AGCAAAACCCAACTAACACT+TGG + chr1_1:27039093-27039112 None:intergenic 40.0%
! TTAGTTGGGTTTTGCTTCAG+TGG - chr1_1:27039097-27039116 Msa0016260:intron 40.0%
! TAGTTGGGTTTTGCTTCAGT+GGG - chr1_1:27039098-27039117 Msa0016260:intron 40.0%
!! AGGTATAAGCATTGAACACC+TGG + chr1_1:27039449-27039468 None:intergenic 40.0%
TGCTTATACCTCTTATGCCT+TGG - chr1_1:27039458-27039477 Msa0016260:intron 40.0%
ACTATTGTCCAAGGCATAAG+AGG + chr1_1:27039469-27039488 None:intergenic 40.0%
GCTGCAAAAGTAATAGCCAA+AGG + chr1_1:27039538-27039557 None:intergenic 40.0%
CTTTCTTTGCAGGCATATAG+CGG - chr1_1:27039563-27039582 Msa0016260:CDS 40.0%
TCTTTGATGTTGAGACTGAC+AGG - chr1_1:27039874-27039893 Msa0016260:CDS 40.0%
!! ATGTATTTCTAGGGACACTC+TGG - chr1_1:27040017-27040036 Msa0016260:CDS 40.0%
!! TGTATTTCTAGGGACACTCT+GGG - chr1_1:27040018-27040037 Msa0016260:CDS 40.0%
TGTGTATGCTGGGATACAAA+TGG - chr1_1:27040050-27040069 Msa0016260:CDS 40.0%
TTCATGAATGCAATCACCAG+AGG + chr1_1:27040126-27040145 None:intergenic 40.0%
TACTCCAACCTCTTGGTTAT+CGG - chr1_1:27040194-27040213 Msa0016260:intron 40.0%
TTGATATGTGCAGACATACC+TGG + chr1_1:27040226-27040245 None:intergenic 40.0%
TGATTACATTGCTTAACCCC+TGG - chr1_1:27040426-27040445 Msa0016260:CDS 40.0%
AAATAAGCAGTCATTGGCAG+GGG + chr1_1:27040471-27040490 None:intergenic 40.0%
AGCCGTAAAGGAATATAGAC+TGG - chr1_1:27040517-27040536 Msa0016260:intron 40.0%
ACTTACAGTCATTGGAGCTA+TGG - chr1_1:27040690-27040709 Msa0016260:intron 40.0%
TTCTGCCAGTCATGATAAGT+CGG - chr1_1:27040802-27040821 Msa0016260:five_prime_UTR 40.0%
!! CTTTACCGACTTATCATGAC+TGG + chr1_1:27040810-27040829 None:intergenic 40.0%
! GAAATAAAAAGTGCGACGCT+TGG - chr1_1:27040835-27040854 Msa0016260:five_prime_UTR 40.0%
TCATGTGAGGAGGAGAATTC+GGG + chr1_1:27027326-27027345 None:intergenic 45.0%
GTCATGTGAGGAGGAGAATT+CGG + chr1_1:27027327-27027346 None:intergenic 45.0%
TCAAACACTGTCATGTGAGG+AGG + chr1_1:27027336-27027355 None:intergenic 45.0%
AAGGTTTCTCCTGATCCAGT+AGG - chr1_1:27027834-27027853 Msa0016260:intron 45.0%
AATGCAGCAATTGATGCTCC+TGG - chr1_1:27027949-27027968 Msa0016260:intron 45.0%
CACTCGAAAAGAAAACCACC+AGG + chr1_1:27027970-27027989 None:intergenic 45.0%
!! CTGGTGGTTTTCTTTTCGAG+TGG - chr1_1:27027968-27027987 Msa0016260:intron 45.0%
!!! GTGGTTTTCTTTTCGAGTGG+TGG - chr1_1:27027971-27027990 Msa0016260:intron 45.0%
!! TCTGGGACATTTTTATCGCG+AGG - chr1_1:27028001-27028020 Msa0016260:intron 45.0%
TTTCGCTTTAATGCAGCTGC+TGG - chr1_1:27028084-27028103 Msa0016260:CDS 45.0%
CCAAGCTCAGATGCAAAGAA+GGG - chr1_1:27028200-27028219 Msa0016260:CDS 45.0%
GATCCTAATCATCCTCCCAT+TGG - chr1_1:27028222-27028241 Msa0016260:CDS 45.0%
GTTCCAATGGGAGGATGATT+AGG + chr1_1:27028228-27028247 None:intergenic 45.0%
! CATTTTTGCAGCCAAAGCAG+TGG + chr1_1:27028301-27028320 None:intergenic 45.0%
GATGATGTCTCCGTATCCAT+AGG + chr1_1:27028351-27028370 None:intergenic 45.0%
! ACCCCTGTATGTGTTTCTGT+TGG - chr1_1:27028582-27028601 Msa0016260:CDS 45.0%
! TCTAAATTTTCCTCCTCGGC+AGG - chr1_1:27028675-27028694 Msa0016260:CDS 45.0%
GGATCCTTCAATTTATGGGC+AGG - chr1_1:27028747-27028766 Msa0016260:intron 45.0%
GGATTAAATCAGGGAGTTGG+TGG - chr1_1:27029077-27029096 Msa0016260:intron 45.0%
!! GTTGGTGGTCTCACATTGAA+AGG - chr1_1:27029092-27029111 Msa0016260:intron 45.0%
GTGGTCTCACATTGAAAGGA+TGG - chr1_1:27029096-27029115 Msa0016260:intron 45.0%
! GAACAAATTCGCCCAGGTTT+TGG - chr1_1:27029208-27029227 Msa0016260:intron 45.0%
GAACTTGAGCTCCAAAACCT+GGG + chr1_1:27029222-27029241 None:intergenic 45.0%
TGAACTTGAGCTCCAAAACC+TGG + chr1_1:27029223-27029242 None:intergenic 45.0%
TTTAGTCAGTGCACCTTGTC+TGG - chr1_1:27029481-27029500 Msa0016260:intron 45.0%
GGGATGTGATGCAATAAGCA+AGG + chr1_1:27029864-27029883 None:intergenic 45.0%
CAACACAATGAAGGAGTTGG+AGG + chr1_1:27030001-27030020 None:intergenic 45.0%
CTCCAACTCCTTCATTGTGT+TGG - chr1_1:27029999-27030018 Msa0016260:intron 45.0%
ACCCAACACAATGAAGGAGT+TGG + chr1_1:27030004-27030023 None:intergenic 45.0%
CTTCACACCCAACACAATGA+AGG + chr1_1:27030010-27030029 None:intergenic 45.0%
CTTCATTGTGTTGGGTGTGA+AGG - chr1_1:27030008-27030027 Msa0016260:intron 45.0%
TCTCAGATTGCCTAGAGACA+TGG - chr1_1:27030042-27030061 Msa0016260:intron 45.0%
ACTACACATGCCATGTCTCT+AGG + chr1_1:27030055-27030074 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_1:27030097-27030116 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:27030103-27030122 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:27030100-27030119 Msa0016260:intron 45.0%
GGCTATCCTAGATCTGTTGT+AGG - chr1_1:27030153-27030172 Msa0016260:intron 45.0%
TCCCACATTGCCTAGAGATA+TGG - chr1_1:27030345-27030364 Msa0016260:intron 45.0%
GACCATATCTCTAGGCAATG+TGG + chr1_1:27030350-27030369 None:intergenic 45.0%
TATCTGAGAGGTAGAAGACC+AGG - chr1_1:27030480-27030499 Msa0016260:intron 45.0%
! GACAGCTCTGGTCTCAATAA+TGG - chr1_1:27030554-27030573 Msa0016260:intron 45.0%
GTCTCAATAATGGCCACTAC+AGG - chr1_1:27030564-27030583 Msa0016260:intron 45.0%
! GCGTCGTGTCTTACTGTTTT+TGG + chr1_1:27030611-27030630 None:intergenic 45.0%
TTTCTCCAAACTCTTCGCCT+TGG + chr1_1:27030640-27030659 None:intergenic 45.0%
GATGAGATGAGAAGAGGAGA+TGG + chr1_1:27030871-27030890 None:intergenic 45.0%
GGAGATGATGAGATGAGAAG+AGG + chr1_1:27030877-27030896 None:intergenic 45.0%
! CAAAGATGGGTTCTGCAATC+AGG + chr1_1:27030898-27030917 None:intergenic 45.0%
CAGTGTTTGACAATGAGGGT+AGG + chr1_1:27031268-27031287 None:intergenic 45.0%
GGAGCAGTGTTTGACAATGA+GGG + chr1_1:27031272-27031291 None:intergenic 45.0%
TGGAGCAGTGTTTGACAATG+AGG + chr1_1:27031273-27031292 None:intergenic 45.0%
AATCCTGGTCTAATGCCAAG+AGG + chr1_1:27031308-27031327 None:intergenic 45.0%
TCTTGGCATTAGACCAGGAT+TGG - chr1_1:27031307-27031326 Msa0016260:intron 45.0%
AGTGTACTAGGCTAGTGGTA+CGG - chr1_1:27031491-27031510 Msa0016260:intron 45.0%
!! GAGATGGATTGTTGCATCTG+TGG + chr1_1:27031658-27031677 None:intergenic 45.0%
ATCATGTTGTTGCTGGGAGA+TGG + chr1_1:27031674-27031693 None:intergenic 45.0%
GCAAAGGATCATGTTGTTGC+TGG + chr1_1:27031681-27031700 None:intergenic 45.0%
TCCTTTGCATTCACAGCAAC+TGG - chr1_1:27031693-27031712 Msa0016260:CDS 45.0%
ACCAGTTGCTGTGAATGCAA+AGG + chr1_1:27031697-27031716 None:intergenic 45.0%
! ACGTTTAGTGGATGACTGGA+TGG + chr1_1:27032127-27032146 None:intergenic 45.0%
GAATGTTGCTGGTGTATCCA+AGG - chr1_1:27032509-27032528 Msa0016260:intron 45.0%
AAATAGCCGACCTCACTTAG+TGG - chr1_1:27032670-27032689 Msa0016260:intron 45.0%
AATAGCCGACCTCACTTAGT+GGG - chr1_1:27032671-27032690 Msa0016260:intron 45.0%
CTTATCCCACTAAGTGAGGT+CGG + chr1_1:27032679-27032698 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+AGG + chr1_1:27032683-27032702 None:intergenic 45.0%
TCACTTAGTGGGATAAGGCT+TGG - chr1_1:27032682-27032701 Msa0016260:intron 45.0%
!!! GTTTTAGTTGCAGGATGGCT+TGG - chr1_1:27033141-27033160 Msa0016260:intron 45.0%
!! CAGGATGGCTTGGAACATTT+TGG - chr1_1:27033151-27033170 Msa0016260:intron 45.0%
! CTCTCACAAGATGATGGTGA+TGG - chr1_1:27033211-27033230 Msa0016260:intron 45.0%
GGGAAATTATTAGCCAGTGC+TGG - chr1_1:27033437-27033456 Msa0016260:intron 45.0%
CCTTATCATGTGCACCAATC+GGG + chr1_1:27033986-27034005 None:intergenic 45.0%
GGTGCACATGATAAGGAGAT+AGG - chr1_1:27033990-27034009 Msa0016260:intron 45.0%
!! CTGGTGTTTGGTGCATCAAT+AGG - chr1_1:27034044-27034063 Msa0016260:intron 45.0%
! ACACGAGATACTCAGGGTTT+TGG + chr1_1:27034768-27034787 None:intergenic 45.0%
GGATAGACACGAGATACTCA+GGG + chr1_1:27034774-27034793 None:intergenic 45.0%
AGGATAGACACGAGATACTC+AGG + chr1_1:27034775-27034794 None:intergenic 45.0%
ACAGAGGCTATATGACTACG+TGG + chr1_1:27034852-27034871 None:intergenic 45.0%
CACTCGAAAGATGAAGTTGC+CGG - chr1_1:27034890-27034909 Msa0016260:CDS 45.0%
ACTCGAAAGATGAAGTTGCC+GGG - chr1_1:27034891-27034910 Msa0016260:CDS 45.0%
GGTAAAGAAGGACAGCCATT+TGG - chr1_1:27035710-27035729 Msa0016260:CDS 45.0%
CAAGAAGACAGCAGACCAAA+TGG + chr1_1:27035728-27035747 None:intergenic 45.0%
! CGGATGTTGGCATGTTTTTC+TGG - chr1_1:27036318-27036337 Msa0016260:intron 45.0%
CAGACCAAATTCAACTCAGC+TGG - chr1_1:27036637-27036656 Msa0016260:intron 45.0%
! GTTGCCAGCTGAGTTGAATT+TGG + chr1_1:27036644-27036663 None:intergenic 45.0%
TTGATACAACTGTGCGGCTT+TGG - chr1_1:27036672-27036691 Msa0016260:intron 45.0%
TGATACAACTGTGCGGCTTT+GGG - chr1_1:27036673-27036692 Msa0016260:intron 45.0%
CCGTATACACAGGAAAGACA+AGG + chr1_1:27036756-27036775 None:intergenic 45.0%
TACCTGTCTTATGTTGTGGG+TGG - chr1_1:27036882-27036901 Msa0016260:intron 45.0%
ACCTGTCTTATGTTGTGGGT+GGG - chr1_1:27036883-27036902 Msa0016260:intron 45.0%
TGGAGTGATAAGGAGGTTGA+GGG + chr1_1:27036915-27036934 None:intergenic 45.0%
TAAGGAGTGGAGTGATAAGG+AGG + chr1_1:27036922-27036941 None:intergenic 45.0%
! ATAAGGTTCGTTTGGTGGCT+GGG + chr1_1:27036955-27036974 None:intergenic 45.0%
! TATAAGGTTCGTTTGGTGGC+TGG + chr1_1:27036956-27036975 None:intergenic 45.0%
GGGAGGATATAAGGTTCGTT+TGG + chr1_1:27036963-27036982 None:intergenic 45.0%
CAGTGAGTAGGGAGGATATA+AGG + chr1_1:27036972-27036991 None:intergenic 45.0%
ACACAGCACCTAGACAATAC+TGG + chr1_1:27037008-27037027 None:intergenic 45.0%
! ATTGTCTAGGTGCTGTGTCT+AGG - chr1_1:27037010-27037029 Msa0016260:intron 45.0%
!! AATGTTAAAGAGTGCCCCAG+GGG + chr1_1:27037254-27037273 None:intergenic 45.0%
!! GAATGTTAAAGAGTGCCCCA+GGG + chr1_1:27037255-27037274 None:intergenic 45.0%
!! AGAATGTTAAAGAGTGCCCC+AGG + chr1_1:27037256-27037275 None:intergenic 45.0%
TCTGAATCAGGTAGGATACC+TGG - chr1_1:27037382-27037401 Msa0016260:intron 45.0%
ATCAGGTAGGATACCTGGTT+TGG - chr1_1:27037387-27037406 Msa0016260:intron 45.0%
TCAGGTAGGATACCTGGTTT+GGG - chr1_1:27037388-27037407 Msa0016260:intron 45.0%
ATTGGGATTATGCCCAAACC+AGG + chr1_1:27037403-27037422 None:intergenic 45.0%
TCCCAATAAAGGGGTTGAGT+AGG - chr1_1:27037416-27037435 Msa0016260:intron 45.0%
CCCTACTCAACCCCTTTATT+GGG + chr1_1:27037420-27037439 None:intergenic 45.0%
CCCAATAAAGGGGTTGAGTA+GGG - chr1_1:27037417-27037436 Msa0016260:intron 45.0%
TCCCTACTCAACCCCTTTAT+TGG + chr1_1:27037421-27037440 None:intergenic 45.0%
ATTGCTTATGTGGCAGTTGG+TGG - chr1_1:27037453-27037472 Msa0016260:intron 45.0%
TTGCTTATGTGGCAGTTGGT+GGG - chr1_1:27037454-27037473 Msa0016260:intron 45.0%
TAGGCAAATGAGTGTAGTGG+AGG - chr1_1:27037479-27037498 Msa0016260:intron 45.0%
! TGAGGACATGTGGGCTAATA+AGG - chr1_1:27037730-27037749 Msa0016260:intron 45.0%
GGCTAATAAGGTGCATCAAC+AGG - chr1_1:27037742-27037761 Msa0016260:intron 45.0%
CCAAGACTGAAACCAAAGCA+TGG + chr1_1:27037882-27037901 None:intergenic 45.0%
! CCATGCTTTGGTTTCAGTCT+TGG - chr1_1:27037879-27037898 Msa0016260:intron 45.0%
! TTTATCGTGATGCACTGACG+CGG + chr1_1:27037980-27037999 None:intergenic 45.0%
AAGGTCCAGGTGAGATGAAT+AGG - chr1_1:27038031-27038050 Msa0016260:intron 45.0%
AGGTCCAGGTGAGATGAATA+GGG - chr1_1:27038032-27038051 Msa0016260:intron 45.0%
TCTTCCCTATTCATCTCACC+TGG + chr1_1:27038039-27038058 None:intergenic 45.0%
GGACGCTAAATCACATGTAG+CGG - chr1_1:27038320-27038339 Msa0016260:intron 45.0%
!! AGGGTTCTGATTTGGGTATG+GGG + chr1_1:27038379-27038398 None:intergenic 45.0%
!! CTAGGGTTCTGATTTGGGTA+TGG + chr1_1:27038381-27038400 None:intergenic 45.0%
CTCAAGTGGTCTAGTGTCTA+GGG + chr1_1:27038398-27038417 None:intergenic 45.0%
GAAACAAGTGAACCAATGGC+TGG + chr1_1:27038445-27038464 None:intergenic 45.0%
GGTGGAAACAAGTGAACCAA+TGG + chr1_1:27038449-27038468 None:intergenic 45.0%
TTGTTTCCACCTGTGTGTTG+AGG - chr1_1:27038458-27038477 Msa0016260:intron 45.0%
ACTGTTCAACCTCAACACAC+AGG + chr1_1:27038470-27038489 None:intergenic 45.0%
! AGGTTTCGCTCTAGACCTTA+CGG - chr1_1:27038563-27038582 Msa0016260:intron 45.0%
! CACATGGGCTATCTCAATGT+GGG + chr1_1:27038594-27038613 None:intergenic 45.0%
CCCATGTGCTCAGAAAGTAA+AGG - chr1_1:27038606-27038625 Msa0016260:intron 45.0%
ACTATCTTTGACCCAAACCC+AGG - chr1_1:27038642-27038661 Msa0016260:intron 45.0%
CTATAACTCTCACCTGGGTT+TGG + chr1_1:27038657-27038676 None:intergenic 45.0%
GAATGACACGCGTCTAGTAT+TGG + chr1_1:27038731-27038750 None:intergenic 45.0%
TTCCCACTACAATTCTGACC+GGG - chr1_1:27038748-27038767 Msa0016260:intron 45.0%
CAACGATACACACACCACAT+GGG + chr1_1:27038830-27038849 None:intergenic 45.0%
ACAACGATACACACACCACA+TGG + chr1_1:27038831-27038850 None:intergenic 45.0%
!! TGCTGCTTAAAGGGCATCAT+AGG + chr1_1:27038879-27038898 None:intergenic 45.0%
TTATGATGGCACAGATTGGG+AGG - chr1_1:27039168-27039187 Msa0016260:CDS 45.0%
TATGATGGCACAGATTGGGA+GGG - chr1_1:27039169-27039188 Msa0016260:CDS 45.0%
CCAAACCTTACACCACCAAT+TGG + chr1_1:27039277-27039296 None:intergenic 45.0%
!! CCAATTGGTGGTGTAAGGTT+TGG - chr1_1:27039274-27039293 Msa0016260:intron 45.0%
TTAAAGCTGGCACTCACCTT+TGG - chr1_1:27039519-27039538 Msa0016260:CDS 45.0%
TATGCCTGCAAAGAAAGGCT+TGG + chr1_1:27039560-27039579 None:intergenic 45.0%
CGCTATATGCCTGCAAAGAA+AGG + chr1_1:27039565-27039584 None:intergenic 45.0%
CAGGCAAATGCACTCATTAC+AGG - chr1_1:27039893-27039912 Msa0016260:CDS 45.0%
!! GTATTTCTAGGGACACTCTG+GGG - chr1_1:27040019-27040038 Msa0016260:CDS 45.0%
! GGAGGTACATTGTGTATGCT+GGG - chr1_1:27040040-27040059 Msa0016260:CDS 45.0%
AAAGTTTGGTCACTTGCCTC+TGG - chr1_1:27040107-27040126 Msa0016260:CDS 45.0%
CCAAGAGGTTGGAGTAACTT+GGG + chr1_1:27040190-27040209 None:intergenic 45.0%
ACCAAGAGGTTGGAGTAACT+TGG + chr1_1:27040191-27040210 None:intergenic 45.0%
TATGACCATACCAGCTCATG+AGG - chr1_1:27040733-27040752 Msa0016260:intron 45.0%
ATGACCATACCAGCTCATGA+GGG - chr1_1:27040734-27040753 Msa0016260:intron 45.0%
GATATTACACCCTCATGAGC+TGG + chr1_1:27040746-27040765 None:intergenic 45.0%
TGTCACTGGTGATTGTGCTA+GGG + chr1_1:27040771-27040790 None:intergenic 45.0%
TAGCACAATCACCAGTGACA+GGG - chr1_1:27040771-27040790 Msa0016260:five_prime_UTR 45.0%
!! TTTATTATATTATATTATGT+GGG - chr1_1:27033556-27033575 Msa0016260:intron 5.0%
TGGGATGGATCATGGATGGA+TGG + chr1_1:27027468-27027487 None:intergenic 50.0%
GCATTGGGATGGATCATGGA+TGG + chr1_1:27027472-27027491 None:intergenic 50.0%
CACTGCATTGGGATGGATCA+TGG + chr1_1:27027476-27027495 None:intergenic 50.0%
ACTCACTCACCTACTGGATC+AGG + chr1_1:27027846-27027865 None:intergenic 50.0%
TCACTCACTCACTCACCTAC+TGG + chr1_1:27027852-27027871 None:intergenic 50.0%
! TCGAGTGGTGGTCTGTTTTC+TGG - chr1_1:27027983-27028002 Msa0016260:intron 50.0%
! CGAGTGGTGGTCTGTTTTCT+GGG - chr1_1:27027984-27028003 Msa0016260:intron 50.0%
GCCAAGCTCAGATGCAAAGA+AGG - chr1_1:27028199-27028218 Msa0016260:CDS 50.0%
CCCTTCTTTGCATCTGAGCT+TGG + chr1_1:27028203-27028222 None:intergenic 50.0%
GCAATCTACTGCCACTGCTT+TGG - chr1_1:27028287-27028306 Msa0016260:intron 50.0%
AGCAGCTTTGCAGCAAATGC+AGG - chr1_1:27028545-27028564 Msa0016260:intron 50.0%
! CTTTTGATATCCTGCCGAGG+AGG + chr1_1:27028688-27028707 None:intergenic 50.0%
!! TCGCTTTTGATATCCTGCCG+AGG + chr1_1:27028691-27028710 None:intergenic 50.0%
CATGCAGAGATCCTTACCTG+TGG - chr1_1:27028726-27028745 Msa0016260:intron 50.0%
CCTCCCTGCCCATAAATTGA+AGG + chr1_1:27028754-27028773 None:intergenic 50.0%
CCTTCAATTTATGGGCAGGG+AGG - chr1_1:27028751-27028770 Msa0016260:intron 50.0%
GGAGGATTGCAGTCAAAGTC+TGG - chr1_1:27028769-27028788 Msa0016260:intron 50.0%
GGCATAGAACAAATTCGCCC+AGG - chr1_1:27029202-27029221 Msa0016260:intron 50.0%
ACAACAACAGCTCCTTGCTC+AGG - chr1_1:27029294-27029313 Msa0016260:intron 50.0%
CTTGTGCATGTACCTGAGCA+AGG + chr1_1:27029309-27029328 None:intergenic 50.0%
CTTGCTCAGGTACATGCACA+AGG - chr1_1:27029307-27029326 Msa0016260:intron 50.0%
ACCCAAATGCCGCAATTAGG+CGG + chr1_1:27029964-27029983 None:intergenic 50.0%
GCAACCCAAATGCCGCAATT+AGG + chr1_1:27029967-27029986 None:intergenic 50.0%
GGAGTTGGAGGATGCAATGA+AGG + chr1_1:27029989-27030008 None:intergenic 50.0%
TTGTGTTGGGTGTGAAGGTG+TGG - chr1_1:27030013-27030032 Msa0016260:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_1:27030098-27030117 None:intergenic 50.0%
GGTAGCCCTACAACAGATCT+AGG + chr1_1:27030162-27030181 None:intergenic 50.0%
! TTATTGGCCTGAGCTTGAGG+AGG - chr1_1:27030203-27030222 Msa0016260:intron 50.0%
ATGCCGCAATTAGGCAGCTA+GGG + chr1_1:27030262-27030281 None:intergenic 50.0%
AATGCCGCAATTAGGCAGCT+AGG + chr1_1:27030263-27030282 None:intergenic 50.0%
AGCTGCCTAATTGCGGCATT+TGG - chr1_1:27030263-27030282 Msa0016260:intron 50.0%
GCTGCCTAATTGCGGCATTT+GGG - chr1_1:27030264-27030283 Msa0016260:intron 50.0%
GCAACCCAAATGCCGCAATT+AGG + chr1_1:27029967-27029986 None:intergenic 50.0%
TTGTGTTAGGTGTGAAGGGG+TGG - chr1_1:27030317-27030336 Msa0016260:intron 50.0%
ACACTCCAAGGCGAAGAGTT+TGG - chr1_1:27030632-27030651 Msa0016260:intron 50.0%
GGCGAAGAGTTTGGAGAAAG+CGG - chr1_1:27030641-27030660 Msa0016260:intron 50.0%
TTTGGAGAAAGCGGCTGAAG+CGG - chr1_1:27030650-27030669 Msa0016260:intron 50.0%
GAGCGAAGCGGGTATTAAGT+GGG - chr1_1:27030685-27030704 Msa0016260:intron 50.0%
TTAGTGTCCGTGCCACCAAA+TGG - chr1_1:27031198-27031217 Msa0016260:intron 50.0%
CTGGTCTAATGCCAAGAGGA+GGG + chr1_1:27031304-27031323 None:intergenic 50.0%
GAACACAGCATGACCAATCC+TGG + chr1_1:27031323-27031342 None:intergenic 50.0%
! GCATTCACAGCAACTGGTTC+AGG - chr1_1:27031699-27031718 Msa0016260:CDS 50.0%
AGGAAAGGGCCTACATCTTC+AGG - chr1_1:27032375-27032394 Msa0016260:intron 50.0%
TTGGCAGCTCCTGAAGATGT+AGG + chr1_1:27032387-27032406 None:intergenic 50.0%
TCAGGAGCTGCCAATAGTAC+TGG - chr1_1:27032393-27032412 Msa0016260:intron 50.0%
!! GCTGCCAATAGTACTGGTAC+AGG - chr1_1:27032399-27032418 Msa0016260:intron 50.0%
!! TCCTGGTGATGGAGTTGCTA+TGG - chr1_1:27032473-27032492 Msa0016260:intron 50.0%
!! TGGTGATGGAGTTGCTATGG+CGG - chr1_1:27032476-27032495 Msa0016260:intron 50.0%
GGCAACTTGCAGAATGTTGC+TGG - chr1_1:27032498-27032517 Msa0016260:intron 50.0%
! TATGGTACTGAAGGAGCAGG+CGG - chr1_1:27032543-27032562 Msa0016260:intron 50.0%
TGCATCTTCCACAAACCAGC+TGG - chr1_1:27032569-27032588 Msa0016260:intron 50.0%
CGACCTCACTTAGTGGGATA+AGG - chr1_1:27032677-27032696 Msa0016260:intron 50.0%
AATCTGTAGCATGCTCGGCA+GGG + chr1_1:27033267-27033286 None:intergenic 50.0%
CTTCTTGTCATGTCCAGCAC+TGG + chr1_1:27033453-27033472 None:intergenic 50.0%
! CAGTGCTGGACATGACAAGA+AGG - chr1_1:27033451-27033470 Msa0016260:intron 50.0%
CCCGATTGGTGCACATGATA+AGG - chr1_1:27033983-27034002 Msa0016260:intron 50.0%
GTTCTGCTATGTAGCAGCAG+AGG - chr1_1:27034300-27034319 Msa0016260:intron 50.0%
AAGATGAAGTTGCCGGGTCA+AGG - chr1_1:27034897-27034916 Msa0016260:CDS 50.0%
AAGAACTAGCCAGCTACCTG+TGG + chr1_1:27036232-27036251 None:intergenic 50.0%
CCTGTCTTATGTTGTGGGTG+GGG - chr1_1:27036884-27036903 Msa0016260:intron 50.0%
GTGGAGTGATAAGGAGGTTG+AGG + chr1_1:27036916-27036935 None:intergenic 50.0%
! TAAGGTTCGTTTGGTGGCTG+GGG + chr1_1:27036954-27036973 None:intergenic 50.0%
GGGGTTGAGTAGGGAACTTA+AGG - chr1_1:27037426-27037445 Msa0016260:intron 50.0%
! TGCTTATGTGGCAGTTGGTG+GGG - chr1_1:27037455-27037474 Msa0016260:intron 50.0%
GGGTAGGCAAATGAGTGTAG+TGG - chr1_1:27037476-27037495 Msa0016260:intron 50.0%
CTCTCTCTGCCCAACCTAAA+AGG + chr1_1:27037545-27037564 None:intergenic 50.0%
!! CTCTCTAAGATCCGGCATGT+TGG + chr1_1:27037691-27037710 None:intergenic 50.0%
!! CACTGGCTCTCTCTAAGATC+CGG + chr1_1:27037699-27037718 None:intergenic 50.0%
TGTAGTGGTGTTCACGAGCA+TGG - chr1_1:27037847-27037866 Msa0016260:intron 50.0%
TGGAGGGTCATACCATGCTT+TGG - chr1_1:27037867-27037886 Msa0016260:intron 50.0%
!! GTTTCAGTCTTGGTGCCAAG+AGG - chr1_1:27037889-27037908 Msa0016260:intron 50.0%
ATGATACCCAGTCTGCATCG+AGG + chr1_1:27037916-27037935 None:intergenic 50.0%
CCTCAAGTGGTCTAGTGTCT+AGG + chr1_1:27038399-27038418 None:intergenic 50.0%
CCTAGACACTAGACCACTTG+AGG - chr1_1:27038396-27038415 Msa0016260:intron 50.0%
GTTCAACCTCAACACACAGG+TGG + chr1_1:27038467-27038486 None:intergenic 50.0%
! GGTTTCGCTCTAGACCTTAC+GGG - chr1_1:27038564-27038583 Msa0016260:intron 50.0%
! GCACATGGGCTATCTCAATG+TGG + chr1_1:27038595-27038614 None:intergenic 50.0%
TCCCACTACAATTCTGACCG+GGG - chr1_1:27038749-27038768 Msa0016260:intron 50.0%
AACAAAGACGATGTGTGCCC+CGG + chr1_1:27038769-27038788 None:intergenic 50.0%
TCGTTGTTCTGCGAACCCTT+TGG - chr1_1:27038844-27038863 Msa0016260:CDS 50.0%
GGGAGGAAAGTTCATGGGTT+TGG - chr1_1:27039008-27039027 Msa0016260:CDS 50.0%
!! GGTTTTGCTTCAGTGGGCTT+CGG - chr1_1:27039104-27039123 Msa0016260:intron 50.0%
! TTCAGTGGGCTTCGGAGAAA+TGG - chr1_1:27039112-27039131 Msa0016260:intron 50.0%
TGGGCTTCGGAGAAATGGAA+AGG - chr1_1:27039117-27039136 Msa0016260:intron 50.0%
CACAACATTGCCAGATGCTG+CGG + chr1_1:27039850-27039869 None:intergenic 50.0%
! GGGAGGTACATTGTGTATGC+TGG - chr1_1:27040039-27040058 Msa0016260:CDS 50.0%
CCCAAGTTACTCCAACCTCT+TGG - chr1_1:27040187-27040206 Msa0016260:intron 50.0%
TCCAACCTCTTGGTTATCGG+AGG - chr1_1:27040197-27040216 Msa0016260:intron 50.0%
TCCTCCGATAACCAAGAGGT+TGG + chr1_1:27040201-27040220 None:intergenic 50.0%
GGTATCCTCCGATAACCAAG+AGG + chr1_1:27040205-27040224 None:intergenic 50.0%
CTTGGTTATCGGAGGATACC+AGG - chr1_1:27040205-27040224 Msa0016260:intron 50.0%
!! TGGTGTTGATCGGACTACCA+GGG + chr1_1:27040446-27040465 None:intergenic 50.0%
GTCATTGGAGCTATGGCACA+TGG - chr1_1:27040697-27040716 Msa0016260:intron 50.0%
TACACCCTCATGAGCTGGTA+TGG + chr1_1:27040741-27040760 None:intergenic 50.0%
CTGTCACTGGTGATTGTGCT+AGG + chr1_1:27040772-27040791 None:intergenic 50.0%
CTAGCACAATCACCAGTGAC+AGG - chr1_1:27040770-27040789 Msa0016260:five_prime_UTR 50.0%
ACAATCACCAGTGACAGGGA+TGG - chr1_1:27040775-27040794 Msa0016260:five_prime_UTR 50.0%
GCAGCAATTGATGCTCCTGG+TGG - chr1_1:27027952-27027971 Msa0016260:intron 55.0%
AGAGGAGGAGTTCCAATGGG+AGG + chr1_1:27028237-27028256 None:intergenic 55.0%
ATGCACCATGAGGCCAGACA+AGG + chr1_1:27029497-27029516 None:intergenic 55.0%
TTCCCCTAGCCGCCTAATTG+CGG - chr1_1:27029952-27029971 Msa0016260:intron 55.0%
ATGCCGCAATTAGGCGGCTA+GGG + chr1_1:27029958-27029977 None:intergenic 55.0%
AATGCCGCAATTAGGCGGCT+AGG + chr1_1:27029959-27029978 None:intergenic 55.0%
AGCCGCCTAATTGCGGCATT+TGG - chr1_1:27029959-27029978 Msa0016260:intron 55.0%
GCCGCCTAATTGCGGCATTT+GGG - chr1_1:27029960-27029979 Msa0016260:intron 55.0%
GCAACCCTCACCTTACAAGC+CGG - chr1_1:27030090-27030109 Msa0016260:intron 55.0%
CGTCCACGCTTCAGGCTTAT+TGG - chr1_1:27030187-27030206 Msa0016260:intron 55.0%
AGGCCAATAAGCCTGAAGCG+TGG + chr1_1:27030193-27030212 None:intergenic 55.0%
! GGCTTATTGGCCTGAGCTTG+AGG - chr1_1:27030200-27030219 Msa0016260:intron 55.0%
CTAGGGGCGGACCACAATTA+AGG + chr1_1:27030245-27030264 None:intergenic 55.0%
TGCCGCAATTAGGCAGCTAG+GGG + chr1_1:27030261-27030280 None:intergenic 55.0%
GGTGTTCGAGGTTGCAACGA+TGG + chr1_1:27030293-27030312 None:intergenic 55.0%
AGACACGACGCAACACTCCA+AGG - chr1_1:27030620-27030639 Msa0016260:intron 55.0%
TTGGAGAAAGCGGCTGAAGC+GGG - chr1_1:27030651-27030670 Msa0016260:intron 55.0%
GGAGCGAAGCGGGTATTAAG+TGG - chr1_1:27030684-27030703 Msa0016260:intron 55.0%
! GTAGGGACCATTTGGTGGCA+CGG + chr1_1:27031208-27031227 None:intergenic 55.0%
AATGCCAAGAGGAGGGCAGA+CGG + chr1_1:27031297-27031316 None:intergenic 55.0%
CCTGGTCTAATGCCAAGAGG+AGG + chr1_1:27031305-27031324 None:intergenic 55.0%
CCTCCTCTTGGCATTAGACC+AGG - chr1_1:27031302-27031321 Msa0016260:intron 55.0%
GCCATAGCAACTCCATCACC+AGG + chr1_1:27032477-27032496 None:intergenic 55.0%
!! GGTGATGGAGTTGCTATGGC+GGG - chr1_1:27032477-27032496 Msa0016260:intron 55.0%
GAATCTGTAGCATGCTCGGC+AGG + chr1_1:27033268-27033287 None:intergenic 55.0%
TGCTCCTATTACGGCCCGAT+TGG - chr1_1:27033969-27033988 Msa0016260:intron 55.0%
TGCACCAATCGGGCCGTAAT+AGG + chr1_1:27033976-27033995 None:intergenic 55.0%
AGTTGCCGGGTCAAGGTTGA+CGG - chr1_1:27034904-27034923 Msa0016260:intron 55.0%
ACCATCCGTCAACCTTGACC+CGG + chr1_1:27034912-27034931 None:intergenic 55.0%
CCCCACCCACAACATAAGAC+AGG + chr1_1:27036887-27036906 None:intergenic 55.0%
!! GCTTATGTGGCAGTTGGTGG+GGG - chr1_1:27037456-27037475 Msa0016260:intron 55.0%
TGGGAATGCATCCCTTTGGG+TGG - chr1_1:27037771-27037790 Msa0016260:intron 55.0%
!! GCTCTAGGGATCCACCCAAA+GGG + chr1_1:27037785-27037804 None:intergenic 55.0%
!! AGCTCTAGGGATCCACCCAA+AGG + chr1_1:27037786-27037805 None:intergenic 55.0%
GGTGGATCCCTAGAGCTGAA+AGG - chr1_1:27037789-27037808 Msa0016260:intron 55.0%
AGTGGTGTTCACGAGCATGG+AGG - chr1_1:27037850-27037869 Msa0016260:intron 55.0%
GTGGTGTTCACGAGCATGGA+GGG - chr1_1:27037851-27037870 Msa0016260:intron 55.0%
AGTCTGCATCGAGGTCCTCT+TGG + chr1_1:27037907-27037926 None:intergenic 55.0%
AAGAGGACCTCGATGCAGAC+TGG - chr1_1:27037906-27037925 Msa0016260:intron 55.0%
AGAGGACCTCGATGCAGACT+GGG - chr1_1:27037907-27037926 Msa0016260:intron 55.0%
TGAGGCAAGGTTGCCTCAAG+TGG + chr1_1:27038412-27038431 None:intergenic 55.0%
TGGTGCAGGTAGTTGAGGCA+AGG + chr1_1:27038425-27038444 None:intergenic 55.0%
ATGGCTGGTGCAGGTAGTTG+AGG + chr1_1:27038430-27038449 None:intergenic 55.0%
CAACTACCTGCACCAGCCAT+TGG - chr1_1:27038430-27038449 Msa0016260:intron 55.0%
AGTGAACCAATGGCTGGTGC+AGG + chr1_1:27038439-27038458 None:intergenic 55.0%
!! TCAATGTGGGCTAGCCCGTA+AGG + chr1_1:27038581-27038600 None:intergenic 55.0%
GCCCCGGTCAGAATTGTAGT+GGG + chr1_1:27038753-27038772 None:intergenic 55.0%
TGCCCCGGTCAGAATTGTAG+TGG + chr1_1:27038754-27038773 None:intergenic 55.0%
ATGGCACAGATTGGGAGGGT+TGG - chr1_1:27039173-27039192 Msa0016260:CDS 55.0%
TGGCACAGATTGGGAGGGTT+GGG - chr1_1:27039174-27039193 Msa0016260:CDS 55.0%
ACAGATTGGGAGGGTTGGGT+GGG - chr1_1:27039178-27039197 Msa0016260:CDS 55.0%
GCAGCCAAGCCTTTCTTTGC+AGG - chr1_1:27039553-27039572 Msa0016260:CDS 55.0%
CAAGCAGGGAGGATCTACAC+AGG - chr1_1:27039791-27039810 Msa0016260:intron 55.0%
AGGGAGGATCTACACAGGTG+AGG - chr1_1:27039796-27039815 Msa0016260:intron 55.0%
CACAGGTGAGGTTTCAGCCA+AGG - chr1_1:27039808-27039827 Msa0016260:intron 55.0%
GTGAGGTTTCAGCCAAGGAG+TGG - chr1_1:27039813-27039832 Msa0016260:intron 55.0%
! TTTCTAGGGACACTCTGGGG+AGG - chr1_1:27040022-27040041 Msa0016260:CDS 55.0%
!! GGTGTTGATCGGACTACCAG+GGG + chr1_1:27040445-27040464 None:intergenic 55.0%
!! CTGGTGTTGATCGGACTACC+AGG + chr1_1:27040447-27040466 None:intergenic 55.0%
GAAGCAACCATCCCTGTCAC+TGG + chr1_1:27040785-27040804 None:intergenic 55.0%
GTGCACCTTGTCTGGCCTCA+TGG - chr1_1:27029489-27029508 Msa0016260:intron 60.0%
GCTAGGGGAAGACCGCAATG+AGG + chr1_1:27029942-27029961 None:intergenic 60.0%
TGCCGCAATTAGGCGGCTAG+GGG + chr1_1:27029957-27029976 None:intergenic 60.0%
AGCCTGAAGCGTGGACGATG+CGG + chr1_1:27030184-27030203 None:intergenic 60.0%
CACCACACCTCCTCAAGCTC+AGG + chr1_1:27030213-27030232 None:intergenic 60.0%
! CTGAGCTTGAGGAGGTGTGG+TGG - chr1_1:27030211-27030230 Msa0016260:intron 60.0%
CGCAATTAGGCAGCTAGGGG+CGG + chr1_1:27030258-27030277 None:intergenic 60.0%
CGCCCCTAGCTGCCTAATTG+CGG - chr1_1:27030256-27030275 Msa0016260:intron 60.0%
GTGCGATTGGTGGAGCGAAG+CGG - chr1_1:27030673-27030692 Msa0016260:intron 60.0%
TGCGATTGGTGGAGCGAAGC+GGG - chr1_1:27030674-27030693 Msa0016260:intron 60.0%
ATGCCAAGAGGAGGGCAGAC+GGG + chr1_1:27031296-27031315 None:intergenic 60.0%
GAAAACGCAGAGCACGCCAG+AGG - chr1_1:27036583-27036602 Msa0016260:intron 60.0%
GGGGTGGGAGAGTTAAGGAG+TGG + chr1_1:27036935-27036954 None:intergenic 60.0%
TGGCTGGGGTGGGAGAGTTA+AGG + chr1_1:27036940-27036959 None:intergenic 60.0%
! GTTCGTTTGGTGGCTGGGGT+GGG + chr1_1:27036950-27036969 None:intergenic 60.0%
!! AAAGAGTGCCCCAGGGGCAT+TGG + chr1_1:27037248-27037267 None:intergenic 60.0%
!! ATGTGGCAGTTGGTGGGGGT+AGG - chr1_1:27037460-27037479 Msa0016260:intron 60.0%
CACCACATGGGCTTGCAGCA+GGG + chr1_1:27038818-27038837 None:intergenic 60.0%
ACACCACATGGGCTTGCAGC+AGG + chr1_1:27038819-27038838 None:intergenic 60.0%
CACAGATTGGGAGGGTTGGG+TGG - chr1_1:27039177-27039196 Msa0016260:CDS 60.0%
CAGATTGGGAGGGTTGGGTG+GGG - chr1_1:27039179-27039198 Msa0016260:CDS 60.0%
GGGTTGGGTGGGGTTACATG+TGG - chr1_1:27039189-27039208 Msa0016260:intron 60.0%
GCCAAGGAGTGGACACCTTC+TGG - chr1_1:27039824-27039843 Msa0016260:intron 60.0%
!! GCCAGAAGGTGTCCACTCCT+TGG + chr1_1:27039828-27039847 None:intergenic 60.0%
!! GGCAGGGGACTGGTGTTGAT+CGG + chr1_1:27040456-27040475 None:intergenic 60.0%
AGCAGTCATTGGCAGGGGAC+TGG + chr1_1:27040466-27040485 None:intergenic 60.0%
ACCCGCATCGTCCACGCTTC+AGG - chr1_1:27030179-27030198 Msa0016260:intron 65.0%
GCCTGAAGCGTGGACGATGC+GGG + chr1_1:27030183-27030202 None:intergenic 65.0%
GGCCTGAGCTTGAGGAGGTG+TGG - chr1_1:27030208-27030227 Msa0016260:intron 65.0%
GGCCACTACAGGCGCTATCG+TGG - chr1_1:27030575-27030594 Msa0016260:intron 65.0%
CGCCACGATAGCGCCTGTAG+TGG + chr1_1:27030580-27030599 None:intergenic 65.0%
CTACAGGCGCTATCGTGGCG+CGG - chr1_1:27030580-27030599 Msa0016260:intron 65.0%
GCTGAAGCGGGTGCGATTGG+TGG - chr1_1:27030663-27030682 Msa0016260:intron 65.0%
GCCGGGTCAAGGTTGACGGA+TGG - chr1_1:27034908-27034927 Msa0016260:intron 65.0%
! GGTTCGTTTGGTGGCTGGGG+TGG + chr1_1:27036951-27036970 None:intergenic 65.0%
GTCCCTGCTGCAAGCCCATG+TGG - chr1_1:27038813-27038832 Msa0016260:CDS 65.0%
CACCTTCTGGCCGCAGCATC+TGG - chr1_1:27039837-27039856 Msa0016260:intron 65.0%
TGCCAGATGCTGCGGCCAGA+AGG + chr1_1:27039842-27039861 None:intergenic 65.0%
GCGGCTGAAGCGGGTGCGAT+TGG - chr1_1:27030660-27030679 Msa0016260:intron 70.0%
CCAAGAGGAGGGCAGACGGG+TGG + chr1_1:27031293-27031312 None:intergenic 70.0%
CCACCCGTCTGCCCTCCTCT+TGG - chr1_1:27031290-27031309 Msa0016260:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 27027238 27041043 27027238 ID=Msa0016260;Name=Msa0016260
chr1_1 mRNA 27027238 27041043 27027238 ID=Msa0016260-mRNA-1;Parent=Msa0016260;Name=Msa0016260-mRNA-1;_AED=0.11;_eAED=0.11;_QI=316|0.87|0.94|1|0.93|0.88|17|202|758
chr1_1 exon 27027238 27027583 27027238 ID=Msa0016260-mRNA-1:exon:9087;Parent=Msa0016260-mRNA-1
chr1_1 exon 27028055 27028252 27028055 ID=Msa0016260-mRNA-1:exon:9086;Parent=Msa0016260-mRNA-1
chr1_1 exon 27028367 27028483 27028367 ID=Msa0016260-mRNA-1:exon:9085;Parent=Msa0016260-mRNA-1
chr1_1 exon 27028569 27028724 27028569 ID=Msa0016260-mRNA-1:exon:9084;Parent=Msa0016260-mRNA-1
chr1_1 exon 27031575 27031724 27031575 ID=Msa0016260-mRNA-1:exon:9083;Parent=Msa0016260-mRNA-1
chr1_1 exon 27034809 27034918 27034809 ID=Msa0016260-mRNA-1:exon:9082;Parent=Msa0016260-mRNA-1
chr1_1 exon 27034986 27035127 27034986 ID=Msa0016260-mRNA-1:exon:9081;Parent=Msa0016260-mRNA-1
chr1_1 exon 27035691 27035918 27035691 ID=Msa0016260-mRNA-1:exon:9080;Parent=Msa0016260-mRNA-1
chr1_1 exon 27038807 27039079 27038807 ID=Msa0016260-mRNA-1:exon:9079;Parent=Msa0016260-mRNA-1
chr1_1 exon 27039154 27039203 27039154 ID=Msa0016260-mRNA-1:exon:9078;Parent=Msa0016260-mRNA-1
chr1_1 exon 27039476 27039584 27039476 ID=Msa0016260-mRNA-1:exon:9077;Parent=Msa0016260-mRNA-1
chr1_1 exon 27039694 27039769 27039694 ID=Msa0016260-mRNA-1:exon:9076;Parent=Msa0016260-mRNA-1
chr1_1 exon 27039857 27040140 27039857 ID=Msa0016260-mRNA-1:exon:9075;Parent=Msa0016260-mRNA-1
chr1_1 exon 27040216 27040325 27040216 ID=Msa0016260-mRNA-1:exon:9074;Parent=Msa0016260-mRNA-1
chr1_1 exon 27040426 27040523 27040426 ID=Msa0016260-mRNA-1:exon:9073;Parent=Msa0016260-mRNA-1
chr1_1 exon 27040620 27040688 27040620 ID=Msa0016260-mRNA-1:exon:9072;Parent=Msa0016260-mRNA-1
chr1_1 exon 27040765 27041043 27040765 ID=Msa0016260-mRNA-1:exon:9071;Parent=Msa0016260-mRNA-1
chr1_1 five_prime_UTR 27040765 27041043 27040765 ID=Msa0016260-mRNA-1:five_prime_utr;Parent=Msa0016260-mRNA-1
chr1_1 five_prime_UTR 27040652 27040688 27040652 ID=Msa0016260-mRNA-1:five_prime_utr;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27040620 27040651 27040620 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27040426 27040523 27040426 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27040216 27040325 27040216 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27039857 27040140 27039857 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27039694 27039769 27039694 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27039476 27039584 27039476 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27039154 27039203 27039154 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27038807 27039079 27038807 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27035691 27035918 27035691 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27034986 27035127 27034986 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27034809 27034918 27034809 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27031575 27031724 27031575 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27028569 27028724 27028569 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27028367 27028483 27028367 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27028055 27028252 27028055 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 CDS 27027440 27027583 27027440 ID=Msa0016260-mRNA-1:cds;Parent=Msa0016260-mRNA-1
chr1_1 three_prime_UTR 27027238 27027439 27027238 ID=Msa0016260-mRNA-1:three_prime_utr;Parent=Msa0016260-mRNA-1
Gene Sequence

>Msa0016260

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTACATATATGATTATTTGGTTAAGAAAAAGTTGCACAATACTGCTAAGTCATTTATGACAGAAGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGTGGTTTTCTTTTCGAGTGGTGGTCTGTTTTCTGGGACATTTTTATCGCGAGGACAAATGAGAAACATTCTGATAATGCCGCAGCATATTTAGAGGCTCAACAGCTTAAAGCGAAAGAACAACAATTGCAAATGCAACAGTTGCAATTAATGCGCCAAGCTCAGATGCAAAGAAGGGATCCTAATCATCCTCCCATTGGAACTCCTCCTCTAAATGCTATCACTACAGAAGGAATGCTAGGGCAATCTACTGCCACTGCTTTGGCTGCAAAAATGTATGAGGATCGGATGAAAAACTCTAACCCTATGGATACGGAGACATCATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGTAAGTGTGACAGCAGCTTTGCAGCAAATGCAGGCTCGAACTCAGCAAACCCCTGATATCAAAAGCGAAGTCAACATGGGAAACATGCAGAGATCCTTACCTGTGGATCCTTCAATTTATGGGCAGGGAGGATTGCAGTCAAAGTCTGGAATCACAAATGCAGGATTAAATCAGGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATAGAACAAATTCGCCCAGGTTTTGGAGCTCAAGTTCAAAAGCCTCTCCTTCAAAGTGCAAATCAGTTTCAGCTTTTGCCACAACAACAACAACAACAGCTCCTTGCTCAGGTACATGCACAAGGAAATATTGGCAATTCACAAGTGTATGGAGATATGGATCCTCAACGATTAAGAGGATTAGCTAGAGGAGGTTTGAATGTGAAAGACAGTCAACCAATTGCAAACGATGGGTCAATAGGTTCTCCAATGCAATCTACTTCATCTAAGAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTTGGCCCTTCTAATTCTCAACCGTCAACTCCATCTATTCATACTCCTGGTGATGGAGTTGCTATGGCGGGCAACTTGCAGAATGTTGCTGGTGTATCCAAGGGTTTGATGATTTATGGTACTGAAGGAGCAGGCGGTCTTGCATCTTCCACAAACCAGCTGGATGGCTTGGAACATTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGATGGTGATGGAAAGGACTTATTTGGGACGTTGAAACGGAACCCTGCCGAGCATGCTACAGATTCTTCAAAAGGCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCCAGTGCTGGACATGACAAGAAGGTTGTTCTTTGGAACATGGAGACACTGAAAACGCAGAGCACGCCAGAGGAACACACTGTTATTATTACTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCGTTTGATACAACTGTGCGGCTTTGGGATGCTGCTGATCCAAGCCTTTCTTTGCAGGCATATAGCGGTCATACTTCACATGTTGCATCCCTTGATTTCCACCCTAAGAAAAATGACCTTTTCTGTTCCTGTGATGATAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGTACTCGTGTTTTTAAGGGAGGATCTACACAGGTGAGGTTTCAGCCAAGGAGTGGACACCTTCTGGCCGCAGCATCTGGCAATGTTGTGTCTCTCTTTGATGTTGAGACTGACAGGCAAATGCACTCATTACAGGGACACTCTGGGGAGGTACATTGTGTATGCTGGGATACAAATGGAGATTATTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTTTGGTCACTTGCCTCTGGTGATTGCATTCATGAACTTAATTCCAGTGGAAACATGTTTCATTCTTGTGTTTTTCACCCAAGTTACTCCAACCTCTTGGTTATCGGAGGATACCAGTCATTGGAGCTATGGCACATGGCCGAAAACAAATGTATGACCATACCAGCTCATGAGGGTGTAATATCAGCCCTAGCACAATCACCAGTGACAGGGATGGTTGCTTCTGCCAGTCATGATAAGTCGGTAAAGATATGGAAATAA
Protein sequence

>Msa0016260

MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDNAAAYLEAQQLKAKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLNAITTEGMLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDARMALLKSTNHPGQMVQGNSVSVTAALQQMQARTQQTPDIKSEVNMGNMQRSLPVDPSIYGQGGLQSKSGITNAGLNQGVGGLTLKGWPLTGIEQIRPGFGAQVQKPLLQSANQFQLLPQQQQQQLLAQVHAQGNIGNSQVYGDMDPQRLRGLARGGLNVKDSQPIANDGSIGSPMQSTSSKNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSIHTPGDGVAMAGNLQNVAGVSKGLMIYGTEGAGGLASSTNQLDGLEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFRPNSTQLATSSFDTTVRLWDAADPSLSLQAYSGHTSHVASLDFHPKKNDLFCSCDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRSGHLLAAASGNVVSLFDVETDRQMHSLQGHSGEVHCVCWDTNGDYLASVSQESVKVWSLASGDCIHELNSSGNMFHSCVFHPSYSNLLVIGGYQSLELWHMAENKCMTIPAHEGVISALAQSPVTGMVASASHDKSVKIWK*