AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159340 MtrunA17_Chr1g0171711 98.558 416 4 1 3 416 371 786 0.0 857
Msa0159340 MtrunA17_Chr7g0237271 65.617 413 139 2 4 416 375 784 0.0 566
Msa0159340 MtrunA17_Chr7g0237241 65.133 413 141 2 4 416 366 775 0.0 560
Msa0159340 MtrunA17_Chr3g0138311 55.792 423 166 6 5 416 485 897 3.43e-156 463
Msa0159340 MtrunA17_Chr1g0148791 56.542 428 157 8 5 416 488 902 3.29e-153 456
Msa0159340 MtrunA17_Chr2g0282401 52.410 332 148 5 91 416 461 788 8.91e-117 358
Msa0159340 MtrunA17_Chr4g0062881 45.783 415 186 6 5 416 79 457 5.44e-111 333
Msa0159340 MtrunA17_Chr4g0047051 43.066 274 153 3 145 416 36 308 1.22e-72 230
Msa0159340 MtrunA17_Chr4g0047071 39.929 283 156 7 145 416 3 282 1.48e-61 200
Msa0159340 MtrunA17_Chr4g0047091 41.053 285 157 5 138 416 87 366 7.80e-61 201
Msa0159340 MtrunA17_Chr4g0047061 41.224 245 137 5 175 416 90 330 3.40e-53 180
Msa0159340 MtrunA17_Chr4g0047101 40.637 251 129 6 126 369 11 248 1.52e-48 166
Msa0159340 MtrunA17_Chr4g0047111 39.189 148 66 3 223 369 7 131 4.36e-26 102
Msa0159340 MtrunA17_Chr1g0172501 27.365 296 201 9 127 415 264 552 5.92e-25 107
Msa0159340 MtrunA17_Chr3g0093681 27.365 296 201 9 127 415 264 552 6.15e-25 107
Msa0159340 MtrunA17_Chr5g0405851 26.537 309 202 10 127 415 146 449 1.49e-23 102
Msa0159340 MtrunA17_Chr5g0401661 28.205 234 152 7 133 353 431 661 5.80e-20 92.4
Msa0159340 MtrunA17_Chr5g0401661 22.910 323 210 11 127 415 323 640 1.24e-15 79.0
Msa0159340 MtrunA17_Chr5g0401661 24.314 255 174 8 142 382 399 648 1.26e-11 66.6
Msa0159340 MtrunA17_Chr4g0067151 26.360 239 162 7 147 374 86 321 2.22e-19 88.6
Msa0159340 MtrunA17_Chr4g0067151 26.552 290 189 12 147 415 35 321 2.31e-17 82.4
Msa0159340 MtrunA17_Chr5g0401671 25.641 234 158 6 133 353 341 571 3.61e-19 89.7
Msa0159340 MtrunA17_Chr5g0401671 22.741 321 211 11 127 415 235 550 2.01e-14 75.1
Msa0159340 MtrunA17_Chr5g0401671 21.649 291 211 6 137 414 304 590 4.16e-13 71.2
Msa0159340 MtrunA17_Chr8g0352821 21.753 308 229 9 117 415 160 464 1.30e-18 88.2
Msa0159340 MtrunA17_Chr4g0053651 26.496 234 156 7 133 353 324 554 9.89e-17 82.4
Msa0159340 MtrunA17_Chr4g0053651 23.171 328 215 12 120 415 211 533 3.88e-16 80.5
Msa0159340 MtrunA17_Chr4g0053651 26.562 256 167 9 142 382 292 541 1.28e-14 75.9
Msa0159340 MtrunA17_Chr1g0163021 50.000 68 29 2 309 371 21 88 1.75e-16 75.1
Msa0159340 MtrunA17_Chr7g0253861 22.997 287 205 8 142 414 58 342 9.07e-16 78.2
Msa0159340 MtrunA17_Chr2g0283891 27.193 228 153 8 202 416 83 310 7.26e-15 75.1
Msa0159340 MtrunA17_Chr2g0281451 25.000 216 156 4 152 363 29 242 1.48e-14 75.9
Msa0159340 MtrunA17_Chr2g0281451 24.390 205 148 5 217 415 8 211 4.01e-13 71.6
Msa0159340 MtrunA17_Chr1g0185501 24.825 286 200 11 142 415 30 312 1.53e-14 73.9
Msa0159340 MtrunA17_Chr3g0136971 23.986 296 197 9 128 415 339 614 3.50e-14 74.7
Msa0159340 MtrunA17_Chr3g0136971 24.891 229 163 5 139 360 419 645 1.37e-13 72.8
Msa0159340 MtrunA17_Chr8g0392701 25.210 238 159 10 153 376 30 262 2.93e-13 70.5
Msa0159340 MtrunA17_Chr8g0392701 22.660 203 151 4 147 344 71 272 2.42e-12 67.8
Msa0159340 MtrunA17_Chr3g0099061 24.585 301 180 12 125 416 250 512 3.64e-13 71.2
Msa0159340 MtrunA17_Chr1g0197551 23.507 268 169 7 132 366 44 308 5.12e-13 71.2
Msa0159340 MtrunA17_Chr6g0448921 23.529 204 151 3 217 415 9 212 9.95e-13 70.1
Msa0159340 MtrunA17_Chr6g0448921 21.239 226 136 4 152 376 30 214 3.68e-12 68.2
Msa0159340 MtrunA17_Chr6g0448921 25.253 198 143 3 145 339 65 260 4.63e-11 64.7
Msa0159340 MtrunA17_Chr1g0168391 26.738 187 131 4 153 334 238 423 1.26e-12 69.3
Msa0159340 MtrunA17_Chr4g0035611 24.427 262 160 8 139 366 51 308 2.09e-12 69.3
Msa0159340 MtrunA17_Chr2g0331981 21.633 245 178 9 141 375 17 257 2.35e-12 68.9
Msa0159340 MtrunA17_Chr8g0383711 20.339 295 220 8 131 416 10 298 2.80e-12 67.0
Msa0159340 MtrunA17_Chr4g0059031 26.178 191 125 6 239 415 34 222 3.26e-12 68.6
Msa0159340 MtrunA17_Chr4g0059031 28.488 172 111 5 133 293 54 224 7.62e-11 64.3
Msa0159340 MtrunA17_Chr1g0200901 24.638 276 192 9 149 415 91 359 3.36e-12 67.8
Msa0159340 MtrunA17_Chr1g0200901 24.911 281 187 9 147 414 131 400 6.64e-12 67.0
Msa0159340 MtrunA17_Chr2g0295791 25.481 208 147 5 207 409 155 359 8.30e-12 66.6
Msa0159340 MtrunA17_Chr3g0095501 23.860 285 196 12 146 415 277 555 1.55e-11 66.2
Msa0159340 MtrunA17_Chr4g0004241 22.422 223 159 9 163 375 39 257 2.09e-11 66.2
Msa0159340 MtrunA17_Chr4g0004241 22.000 200 134 4 147 332 65 256 2.73e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159340 AT2G32700.6 70.120 415 121 3 3 416 373 785 0.0 612
Msa0159340 AT2G32700.2 69.784 417 121 4 3 416 373 787 0.0 606
Msa0159340 AT2G32700.5 69.784 417 121 4 3 416 373 787 0.0 606
Msa0159340 AT2G32700.1 69.784 417 121 4 3 416 373 787 0.0 606
Msa0159340 AT2G32700.7 69.784 417 121 4 3 416 392 806 0.0 606
Msa0159340 AT2G32700.4 69.784 417 121 4 3 416 373 787 0.0 606
Msa0159340 AT2G32700.3 69.784 417 121 4 3 416 373 787 0.0 606
Msa0159340 AT4G32551.1 59.712 417 154 5 5 416 524 931 6.19e-171 503
Msa0159340 AT4G32551.2 59.712 417 154 5 5 416 562 969 1.16e-170 503
Msa0159340 AT2G41500.1 28.214 280 187 10 145 415 261 535 8.72e-23 100
Msa0159340 AT2G41500.1 23.529 238 174 6 184 415 258 493 5.48e-12 67.8
Msa0159340 AT2G41500.1 24.138 203 147 5 141 338 341 541 1.45e-11 66.6
Msa0159340 AT2G41500.2 28.214 280 187 10 145 415 261 535 8.72e-23 100
Msa0159340 AT2G41500.2 23.529 238 174 6 184 415 258 493 5.48e-12 67.8
Msa0159340 AT2G41500.2 24.138 203 147 5 141 338 341 541 1.45e-11 66.6
Msa0159340 AT4G02730.1 26.000 300 208 10 129 416 33 330 6.38e-21 93.6
Msa0159340 AT3G49660.1 26.582 237 162 7 147 374 79 312 1.66e-18 86.3
Msa0159340 AT3G49660.1 26.027 292 198 12 139 415 24 312 2.93e-18 85.5
Msa0159340 AT5G13480.1 22.337 291 215 8 133 415 117 404 1.54e-16 82.4
Msa0159340 AT5G13480.4 22.337 291 215 8 133 415 105 392 1.71e-16 82.0
Msa0159340 AT5G13480.3 22.337 291 215 8 133 415 105 392 1.79e-16 82.0
Msa0159340 AT5G13480.2 22.337 291 215 8 133 415 128 415 2.33e-16 81.6
Msa0159340 AT1G11160.1 23.171 246 179 6 123 363 2 242 5.58e-16 80.9
Msa0159340 AT1G11160.1 25.366 205 146 5 217 415 8 211 1.40e-13 73.2
Msa0159340 AT1G11160.2 23.171 246 179 6 123 363 2 242 6.60e-16 80.5
Msa0159340 AT1G11160.2 25.366 205 146 5 217 415 8 211 1.56e-13 73.2
Msa0159340 AT1G61210.3 24.691 243 171 6 152 390 29 263 7.17e-16 80.5
Msa0159340 AT1G61210.3 26.341 205 144 5 217 415 8 211 1.05e-14 77.0
Msa0159340 AT1G11160.4 23.171 246 179 6 123 363 2 242 7.43e-16 80.5
Msa0159340 AT1G11160.4 25.366 205 146 5 217 415 8 211 1.66e-13 73.2
Msa0159340 AT1G61210.2 24.691 243 171 6 152 390 29 263 1.16e-15 79.7
Msa0159340 AT1G61210.2 26.341 205 144 5 217 415 8 211 1.55e-14 76.3
Msa0159340 AT1G61210.1 24.691 243 171 6 152 390 29 263 1.23e-15 79.7
Msa0159340 AT1G61210.1 26.341 205 144 5 217 415 8 211 1.55e-14 76.3
Msa0159340 AT5G60940.2 22.917 336 230 12 108 416 1 334 1.32e-15 77.8
Msa0159340 AT2G43770.1 21.603 287 209 8 142 414 56 340 6.06e-15 75.9
Msa0159340 AT2G33340.2 27.778 216 145 5 129 334 209 423 1.27e-14 76.3
Msa0159340 AT2G33340.1 27.778 216 145 5 129 334 209 423 1.27e-14 76.3
Msa0159340 AT5G60940.1 22.769 325 223 11 119 416 103 426 1.40e-14 75.5
Msa0159340 AT2G33340.3 27.778 216 145 6 129 334 209 423 1.55e-14 75.9
Msa0159340 AT5G67320.1 23.975 317 206 10 130 415 256 568 2.86e-14 75.1
Msa0159340 AT5G25150.1 21.812 298 166 7 144 415 357 613 1.34e-13 73.2
Msa0159340 AT5G25150.1 29.245 212 128 7 116 307 420 629 1.99e-11 66.2
Msa0159340 AT5G25150.2 21.812 298 166 7 144 415 357 613 1.53e-13 72.8
Msa0159340 AT5G25150.2 29.245 212 128 7 116 307 420 629 2.08e-11 66.2
Msa0159340 AT1G48630.1 23.415 205 147 5 147 344 71 272 3.71e-13 70.5
Msa0159340 AT1G48630.1 24.051 237 163 9 153 376 30 262 1.23e-11 65.9
Msa0159340 AT5G08390.1 24.020 204 150 3 217 415 9 212 4.31e-13 71.6
Msa0159340 AT5G08390.1 26.425 193 132 8 190 376 26 214 1.12e-11 67.4
Msa0159340 AT5G08390.1 25.000 196 142 3 147 339 67 260 3.23e-11 65.9
Msa0159340 AT3G18130.1 23.902 205 146 5 147 344 71 272 4.46e-13 70.1
Msa0159340 AT3G18130.1 24.370 238 161 9 153 376 30 262 1.07e-11 66.2
Msa0159340 AT1G29260.1 25.000 228 158 8 202 416 82 309 5.08e-13 70.1
Msa0159340 AT3G15980.3 23.318 223 157 9 163 375 39 257 5.67e-13 71.2
Msa0159340 AT3G15980.6 23.318 223 157 9 163 375 39 257 5.67e-13 71.2
Msa0159340 AT3G15980.2 23.318 223 157 9 163 375 39 257 5.67e-13 71.2
Msa0159340 AT3G15980.4 23.318 223 157 9 163 375 39 257 5.67e-13 71.2
Msa0159340 AT3G15980.1 23.318 223 157 9 163 375 39 257 5.85e-13 71.2
Msa0159340 AT3G15980.7 23.318 223 157 9 163 375 39 257 6.02e-13 71.2
Msa0159340 AT3G15980.5 23.318 223 157 9 163 375 39 257 7.05e-13 71.2
Msa0159340 AT5G23430.3 24.390 205 148 5 217 415 9 212 3.92e-12 68.6
Msa0159340 AT5G23430.3 25.000 196 142 3 147 339 67 260 1.62e-11 66.6
Msa0159340 AT5G23430.3 22.467 227 132 6 152 376 30 214 1.68e-11 66.6
Msa0159340 AT5G23430.2 24.390 205 148 5 217 415 9 212 3.92e-12 68.6
Msa0159340 AT5G23430.2 25.000 196 142 3 147 339 67 260 1.62e-11 66.6
Msa0159340 AT5G23430.2 22.467 227 132 6 152 376 30 214 1.68e-11 66.6
Msa0159340 AT5G23430.1 24.390 205 148 5 217 415 9 212 4.00e-12 68.6
Msa0159340 AT5G23430.1 25.000 196 142 3 147 339 67 260 1.64e-11 66.6
Msa0159340 AT5G23430.1 22.467 227 132 6 152 376 30 214 1.74e-11 66.6
Msa0159340 AT1G73720.1 24.080 299 183 9 125 416 249 510 5.41e-12 67.8
Msa0159340 AT2G21390.1 24.615 260 160 8 140 366 52 308 5.97e-12 68.2
Msa0159340 AT1G18080.1 22.927 205 149 5 147 344 71 273 1.61e-11 65.5
Msa0159340 AT1G18080.1 25.114 219 147 7 153 357 30 245 4.24e-11 64.3
Msa0159340 AT1G52360.4 22.422 223 159 9 163 375 39 257 1.66e-11 66.6
Msa0159340 AT1G52360.4 22.000 200 134 4 147 332 65 256 3.86e-11 65.5
Msa0159340 AT1G52360.1 22.422 223 159 9 163 375 39 257 1.66e-11 66.6
Msa0159340 AT1G52360.1 22.000 200 134 4 147 332 65 256 3.86e-11 65.5
Msa0159340 AT1G52360.3 22.624 221 157 9 165 375 41 257 1.92e-11 66.6
Msa0159340 AT1G52360.3 22.000 200 134 4 147 332 65 256 4.55e-11 65.5
Msa0159340 AT1G52360.2 22.422 223 159 9 163 375 83 301 2.37e-11 66.2
Msa0159340 AT1G52360.2 22.000 200 134 4 147 332 109 300 4.31e-11 65.5
Msa0159340 AT1G04510.2 24.211 190 135 3 153 334 236 424 4.33e-11 65.1
Msa0159340 AT1G04510.1 24.211 190 135 3 153 334 236 424 4.40e-11 65.1
Msa0159340 AT5G52820.1 24.825 286 159 9 180 415 108 387 5.85e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 763 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAGGGTTTGATGATTTA+TGG 0.148294 1_4:-29800707 Msa0159340:CDS
CAGGATGGCTTGGAACATTT+TGG 0.166410 1_4:-29800081 Msa0159340:CDS
AGATTACTCGTAAAATAAAT+TGG 0.211663 1_4:-29792346 Msa0159340:three_prime_UTR
GGATACAAATGGAGATTATT+TGG 0.212936 1_4:-29793262 Msa0159340:CDS
GGTGATGGAAAGGACTTATT+TGG 0.218195 1_4:-29800006 Msa0159340:CDS
GCAGCCAAGCCTTTCTTTGC+AGG 0.229828 1_4:-29793770 Msa0159340:intron
CTTGTCATTAGGTTGTTCTT+TGG 0.260725 1_4:-29796708 Msa0159340:intron
TTGATACAACTGTGCGGCTT+TGG 0.280722 1_4:-29796582 Msa0159340:CDS
CACCTTCTGGCCGCAGCATC+TGG 0.284735 1_4:-29793486 Msa0159340:CDS
TATTATAGAATAACCGAAAA+AGG 0.301943 1_4:-29800877 Msa0159340:intron
TACTCCAACCTCTTGGTTAT+CGG 0.325693 1_4:-29793129 Msa0159340:CDS
GCCAAGGAGTGGACACCTTC+TGG 0.333667 1_4:-29793499 Msa0159340:CDS
GTTGCCAGCTGAGTTGAATT+TGG 0.340739 1_4:+29796613 None:intergenic
CAGGCAAATGCACTCATTAC+AGG 0.344223 1_4:-29793430 Msa0159340:intron
AGGAAAGGGCCTACATCTTC+AGG 0.354520 1_4:-29800857 Msa0159340:CDS
CGCTATATGCCTGCAAAGAA+AGG 0.364543 1_4:+29793761 None:intergenic
GGGAGGTACATTGTGTATGC+TGG 0.368192 1_4:-29793284 Msa0159340:CDS
TGCTGTCATTTCTCTTCAGA+TGG 0.369775 1_4:-29799816 Msa0159340:CDS
TGATTCCACATTATCATCTA+AGG 0.380642 1_4:+29800047 None:intergenic
ATGACAAGTCAGTAAAGATA+TGG 0.386590 1_4:-29792510 Msa0159340:CDS
TGATACAACTGTGCGGCTTT+GGG 0.391565 1_4:-29796581 Msa0159340:CDS
GAATCTGTAGCATGCTCGGC+AGG 0.396589 1_4:+29799967 None:intergenic
ATAACAATGAGATTCGCTTC+TGG 0.401253 1_4:-29793669 Msa0159340:CDS
GTCAAGAATCTGTCAAAGTT+TGG 0.406905 1_4:-29793230 Msa0159340:CDS
CTGTCACTGGTGATTGTGCT+AGG 0.409504 1_4:+29792554 None:intergenic
GGCAACTTGCAGAATGTTGC+TGG 0.416007 1_4:-29800734 Msa0159340:CDS
TCACCAGGAGTATGAATAGA+TGG 0.426192 1_4:+29800773 None:intergenic
ATTTCCTGTACCAGTACTAT+TGG 0.429601 1_4:+29800829 None:intergenic
ACCAAGAGGTTGGAGTAACT+TGG 0.432164 1_4:+29793135 None:intergenic
AAAGTTTGGTCACTTGCCTC+TGG 0.432801 1_4:-29793216 Msa0159340:CDS
TTGATTTACCAGCTGGTTTG+TGG 0.439336 1_4:+29800655 None:intergenic
GTTGACGGTTGAGAATTAGA+AGG 0.441908 1_4:+29800797 None:intergenic
ATGTATTTCTAGGGACACTC+TGG 0.444218 1_4:-29793306 Msa0159340:intron
GCCAGAAGGTGTCCACTCCT+TGG 0.444368 1_4:+29793498 None:intergenic
GTGATGGAAAGGACTTATTT+GGG 0.454425 1_4:-29800005 Msa0159340:CDS
CATGCTACAGATTCTTCAAA+AGG 0.454429 1_4:-29799958 Msa0159340:intron
GATTACTCGTAAAATAAATT+GGG 0.458908 1_4:-29792345 Msa0159340:three_prime_UTR
CTTCTTGTCATGTCCAGCAC+TGG 0.468790 1_4:+29799782 None:intergenic
CCCAAGTTACTCCAACCTCT+TGG 0.475839 1_4:-29793136 Msa0159340:CDS
ACTTATTTGGGACGTTGAAA+CGG 0.485085 1_4:-29799993 Msa0159340:CDS
ATAATAACAGTGTGTTCCTC+TGG 0.488727 1_4:+29796655 None:intergenic
ACCATAAATCATCAAACCCT+TGG 0.489033 1_4:+29800706 None:intergenic
TACACCCTCATGAGCTGGTA+TGG 0.493721 1_4:+29792585 None:intergenic
CTTGGTTATCGGAGGATACC+AGG 0.501060 1_4:-29793118 Msa0159340:intron
TCTTTGATGTTGAGACTGAC+AGG 0.507574 1_4:-29793449 Msa0159340:CDS
TGAAGAATCTGTAGCATGCT+CGG 0.510849 1_4:+29799963 None:intergenic
GCTGTCATTTCTCTTCAGAT+GGG 0.513862 1_4:-29799815 Msa0159340:CDS
CAGACCAAATTCAACTCAGC+TGG 0.516977 1_4:-29796617 Msa0159340:CDS
TCAGGAGCTGCCAATAGTAC+TGG 0.519807 1_4:-29800839 Msa0159340:CDS
TTGATGATTTATGGTACTGA+AGG 0.523817 1_4:-29800698 Msa0159340:CDS
CTTTACTGACTTGTCATGAC+TGG 0.525505 1_4:+29792516 None:intergenic
TGCCAGATGCTGCGGCCAGA+AGG 0.525651 1_4:+29793484 None:intergenic
TCCTGGTGATGGAGTTGCTA+TGG 0.529700 1_4:-29800759 Msa0159340:CDS
TGCATCTTCCACAAACCAGC+TGG 0.530085 1_4:-29800663 Msa0159340:intron
AATCTCATTGTTATCATCAC+AGG 0.531071 1_4:+29793678 None:intergenic
GGGAAATTATTAGCCAGTGC+TGG 0.533775 1_4:-29799795 Msa0159340:CDS
CTAGCACAATCACCAGTGAC+AGG 0.536452 1_4:-29792553 Msa0159340:CDS
GAAGCAACCATCCCTGTCAC+TGG 0.538448 1_4:+29792541 None:intergenic
GTATGAATAGATGGAGTTGA+CGG 0.541616 1_4:+29800782 None:intergenic
TGTGTATGCTGGGATACAAA+TGG 0.541891 1_4:-29793273 Msa0159340:CDS
GCTGCCAATAGTACTGGTAC+AGG 0.543266 1_4:-29800833 Msa0159340:CDS
ACTTACAGTCATTGGAGCTA+TGG 0.548084 1_4:-29792633 Msa0159340:intron
TCTATTCATACTCCTGGTGA+TGG 0.551044 1_4:-29800770 Msa0159340:CDS
TCATTTCTCTCACAAGATGA+TGG 0.552374 1_4:-29800027 Msa0159340:CDS
AGAATGAAACATGTTTCCAC+TGG 0.557652 1_4:+29793170 None:intergenic
GGAGGTACATTGTGTATGCT+GGG 0.558903 1_4:-29793283 Msa0159340:CDS
TTTCTTAGGGTGGAAATCAA+GGG 0.559171 1_4:+29793717 None:intergenic
TCCTCCGATAACCAAGAGGT+TGG 0.560162 1_4:+29793125 None:intergenic
TATGCCTGCAAAGAAAGGCT+TGG 0.561064 1_4:+29793766 None:intergenic
TATCATCACAGGAACAGAAA+AGG 0.561084 1_4:+29793689 None:intergenic
TGTATTTCTAGGGACACTCT+GGG 0.561169 1_4:-29793305 Msa0159340:intron
ACTCCATCTATTCATACTCC+TGG 0.561698 1_4:-29800776 Msa0159340:CDS
CCAAGAGGTTGGAGTAACTT+GGG 0.561716 1_4:+29793136 None:intergenic
TATGACCATACCAGCTCATG+AGG 0.566508 1_4:-29792590 Msa0159340:CDS
GATATTACACCCTCATGAGC+TGG 0.567462 1_4:+29792580 None:intergenic
TTAGGTTGTTCTTTGGAACA+TGG 0.568619 1_4:-29796701 Msa0159340:intron
TGTCACTGGTGATTGTGCTA+GGG 0.568713 1_4:+29792555 None:intergenic
CTCTCACAAGATGATGGTGA+TGG 0.571976 1_4:-29800021 Msa0159340:CDS
GTCATTGGAGCTATGGCACA+TGG 0.572018 1_4:-29792626 Msa0159340:CDS
ATTTATGGTACTGAAGGAGC+AGG 0.572820 1_4:-29800692 Msa0159340:CDS
CACAACATTGCCAGATGCTG+CGG 0.578567 1_4:+29793476 None:intergenic
ACAAGATGATGGTGATGGAA+AGG 0.579632 1_4:-29800016 Msa0159340:CDS
GAATGTTGCTGGTGTATCCA+AGG 0.582149 1_4:-29800723 Msa0159340:CDS
ATTCATGAACTTAATTCCAG+TGG 0.584603 1_4:-29793186 Msa0159340:CDS
TTGGCAGCTCCTGAAGATGT+AGG 0.588055 1_4:+29800848 None:intergenic
CACAGGTGAGGTTTCAGCCA+AGG 0.590433 1_4:-29793515 Msa0159340:CDS
TCCAACCTCTTGGTTATCGG+AGG 0.596783 1_4:-29793126 Msa0159340:CDS
GCCATAGCAACTCCATCACC+AGG 0.598806 1_4:+29800758 None:intergenic
TTGACGGTTGAGAATTAGAA+GGG 0.600579 1_4:+29800798 None:intergenic
AATGTTGCTGGTGTATCCAA+GGG 0.601732 1_4:-29800722 Msa0159340:CDS
GTGAGGTTTCAGCCAAGGAG+TGG 0.601900 1_4:-29793510 Msa0159340:CDS
TATAGAACTAACTTCACTGA+AGG 0.604171 1_4:+29799863 None:intergenic
CTTTCTTTGCAGGCATATAG+CGG 0.607957 1_4:-29793760 Msa0159340:CDS
GGTGATGGAGTTGCTATGGC+GGG 0.608534 1_4:-29800755 Msa0159340:CDS
AGTTCTATACGCAAAAGCAA+TGG 0.612132 1_4:-29799849 Msa0159340:CDS
TGGTGATGGAGTTGCTATGG+CGG 0.619692 1_4:-29800756 Msa0159340:CDS
CAGTGCTGGACATGACAAGA+AGG 0.620953 1_4:-29799781 Msa0159340:intron
GAAAACGCAGAGCACGCCAG+AGG 0.631839 1_4:-29796671 Msa0159340:CDS
AGTAATCTACATCAACAACT+TGG 0.632603 1_4:+29792361 None:intergenic
AATCTGTAGCATGCTCGGCA+GGG 0.649746 1_4:+29799968 None:intergenic
TAGCACAATCACCAGTGACA+GGG 0.654726 1_4:-29792552 Msa0159340:CDS
ACTGGTACAGGAAATACACT+TGG 0.661183 1_4:-29800821 Msa0159340:CDS
ACAATCACCAGTGACAGGGA+TGG 0.671107 1_4:-29792548 Msa0159340:CDS
TTCATGAATGCAATCACCAG+AGG 0.679527 1_4:+29793200 None:intergenic
TGGCTCCTTAGATGATAATG+TGG 0.680795 1_4:-29800052 Msa0159340:CDS
AGGGAGGATCTACACAGGTG+AGG 0.687544 1_4:-29793527 Msa0159340:CDS
TATGGTACTGAAGGAGCAGG+CGG 0.702719 1_4:-29800689 Msa0159340:CDS
ATGACCATACCAGCTCATGA+GGG 0.705801 1_4:-29792589 Msa0159340:CDS
CAAGCAGGGAGGATCTACAC+AGG 0.707367 1_4:-29793532 Msa0159340:intron
CTTCGTTTGATACAACTGTG+CGG 0.708138 1_4:-29796588 Msa0159340:CDS
TTTCTAGGGACACTCTGGGG+AGG 0.715436 1_4:-29793301 Msa0159340:intron
GGTATCCTCCGATAACCAAG+AGG 0.726567 1_4:+29793121 None:intergenic
GTATTTCTAGGGACACTCTG+GGG 0.781503 1_4:-29793304 Msa0159340:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAATAAAA+AGG + chr1_4:29796021-29796040 None:intergenic 0.0%
!!! AATTTGTTAATTTGTTAATT+GGG - chr1_4:29793183-29793202 Msa0159340:CDS 10.0%
!! AAAAATACTAATAAAATTCA+AGG + chr1_4:29793282-29793301 None:intergenic 10.0%
!!! TATTTTAGTATTTTTTTCAA+CGG - chr1_4:29793388-29793407 Msa0159340:intron 10.0%
!! GTTTATTATATTATATTATG+TGG - chr1_4:29795806-29795825 Msa0159340:intron 10.0%
!! TTATTATATTATATTATGTG+GGG - chr1_4:29795808-29795827 Msa0159340:intron 10.0%
!! ATTAATCAATACAATAAATA+GGG - chr1_4:29795888-29795907 Msa0159340:intron 10.0%
!!! AAAAAATGCATATTTTTTTA+TGG + chr1_4:29796708-29796727 None:intergenic 10.0%
!! AAATATAGTATATACTATAT+AGG - chr1_4:29799275-29799294 Msa0159340:intron 10.0%
!! TAAATATAAATAGATATGAA+AGG + chr1_4:29802150-29802169 None:intergenic 10.0%
!! AGATAAAAAAGTTATTATTT+AGG - chr1_4:29802750-29802769 Msa0159340:intron 10.0%
!!! GAATTTGTTAATTTGTTAAT+TGG - chr1_4:29793182-29793201 Msa0159340:CDS 15.0%
!!! TGTGACTTTTATTTTAAATT+AGG - chr1_4:29793333-29793352 Msa0159340:intron 15.0%
!! TAGAAAATGCAAAAATAAAA+AGG + chr1_4:29794511-29794530 None:intergenic 15.0%
!! GATTAATCAATACAATAAAT+AGG - chr1_4:29795887-29795906 Msa0159340:intron 15.0%
!!! CATTTGTTTTTAATATGATT+AGG - chr1_4:29796838-29796857 Msa0159340:intron 15.0%
!!! TAGAATTGAATCAATTTTAA+AGG - chr1_4:29797884-29797903 Msa0159340:intron 15.0%
!!! AGAATTGAATCAATTTTAAA+GGG - chr1_4:29797885-29797904 Msa0159340:intron 15.0%
!! TAATATTGATACATTAAGTA+TGG - chr1_4:29797921-29797940 Msa0159340:intron 15.0%
!! TACATTTATTTATGTTACAA+AGG - chr1_4:29798029-29798048 Msa0159340:intron 15.0%
!!! TAAAAGTTTTAACAAAACTA+GGG + chr1_4:29798367-29798386 None:intergenic 15.0%
!!! TTAAAAGTTTTAACAAAACT+AGG + chr1_4:29798368-29798387 None:intergenic 15.0%
!! TTTATAAGTTTAAATTGGTA+TGG + chr1_4:29798668-29798687 None:intergenic 15.0%
!! ATCTGTTTATAAGTTTAAAT+TGG + chr1_4:29798673-29798692 None:intergenic 15.0%
!! TATTCATTATATATAGTTGA+TGG - chr1_4:29799323-29799342 Msa0159340:intron 15.0%
!! AGAAAAAATATATTGTTGAT+TGG + chr1_4:29799807-29799826 None:intergenic 15.0%
!! ACTTTAGATTTATTGAAATT+CGG + chr1_4:29802093-29802112 None:intergenic 15.0%
!! TTAGAATTATATGTATTTCT+AGG - chr1_4:29802167-29802186 Msa0159340:intron 15.0%
!!! TAGAATTATATGTATTTCTA+GGG - chr1_4:29802168-29802187 Msa0159340:intron 15.0%
!!! AAAGTTATTATTTAGGATAT+TGG - chr1_4:29802757-29802776 Msa0159340:intron 15.0%
!!! ACTTATACATGTTTTGATAT+CGG - chr1_4:29792645-29792664 Msa0159340:intron 20.0%
!!! TTTTGGTAATTTTTCTTTTG+TGG - chr1_4:29793479-29793498 Msa0159340:CDS 20.0%
!! ATGTAAAGTAGTAAGATATT+TGG - chr1_4:29793677-29793696 Msa0159340:CDS 20.0%
!! TGTAAAGTAGTAAGATATTT+GGG - chr1_4:29793678-29793697 Msa0159340:CDS 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + chr1_4:29793784-29793803 None:intergenic 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + chr1_4:29793784-29793803 None:intergenic 20.0%
!! ATGTATATTTGAACATGATT+TGG - chr1_4:29794226-29794245 Msa0159340:intron 20.0%
!! TAATTTACCACATATTTGAA+CGG - chr1_4:29794397-29794416 Msa0159340:intron 20.0%
!! TATTATAGAATAACCGAAAA+AGG - chr1_4:29794606-29794625 Msa0159340:intron 20.0%
!! ATTTGATGTAAGAAATGTTA+TGG - chr1_4:29794986-29795005 Msa0159340:intron 20.0%
!! AATCATTTACCAAAAATGAA+AGG + chr1_4:29795057-29795076 None:intergenic 20.0%
!!! ATAATATTCTTGATTTGCAA+AGG - chr1_4:29795247-29795266 Msa0159340:intron 20.0%
!! AAGATTCAGCTAAAAATATA+GGG + chr1_4:29795325-29795344 None:intergenic 20.0%
!! TAAGATTCAGCTAAAAATAT+AGG + chr1_4:29795326-29795345 None:intergenic 20.0%
!!! ATATTTTTAGCTGAATCTTA+TGG - chr1_4:29795326-29795345 Msa0159340:intron 20.0%
!! CGTAAATAACAAAAATCTAT+AGG + chr1_4:29795571-29795590 None:intergenic 20.0%
!!! TCTTTAATTTACTGATTTAG+AGG - chr1_4:29795740-29795759 Msa0159340:intron 20.0%
!! TAGTTAATCCTCAATTAATA+GGG - chr1_4:29795862-29795881 Msa0159340:intron 20.0%
!!! ATCTTTGATTTAGAATTCAT+TGG + chr1_4:29795985-29796004 None:intergenic 20.0%
!!! CTAAATCAAAGATCTAAAAT+TGG - chr1_4:29795992-29796011 Msa0159340:intron 20.0%
!! TAGAAAAACAAAAAGTGAAT+AGG + chr1_4:29796334-29796353 None:intergenic 20.0%
!!! TTTTTCTAATCCTTAGTTTT+TGG - chr1_4:29796346-29796365 Msa0159340:intron 20.0%
!! GTAATATCAATTATCATATC+AGG + chr1_4:29796383-29796402 None:intergenic 20.0%
!! TTTATGATTATATCTTCCAT+TGG + chr1_4:29796512-29796531 None:intergenic 20.0%
!! TTGATTCTTAATATTAACAG+AGG + chr1_4:29797099-29797118 None:intergenic 20.0%
!! ATTCTATCAATCTAGTAAAA+AGG + chr1_4:29797520-29797539 None:intergenic 20.0%
!! TATATTGTCTATATATGAGA+GGG - chr1_4:29797724-29797743 Msa0159340:intron 20.0%
!!! GAATTGAATCAATTTTAAAG+GGG - chr1_4:29797886-29797905 Msa0159340:intron 20.0%
!! ATTGTTAGACAATAGAATAA+AGG + chr1_4:29798055-29798074 None:intergenic 20.0%
!! TAGAAATCAAAATAACAGAT+TGG + chr1_4:29798096-29798115 None:intergenic 20.0%
!!! AGGTTTAATATTTTTTAGAC+AGG + chr1_4:29798154-29798173 None:intergenic 20.0%
!! TTAACACCATCAAATAATAT+TGG - chr1_4:29798331-29798350 Msa0159340:intron 20.0%
!!! TAAAACTTTTAAAAGTAACC+TGG - chr1_4:29798376-29798395 Msa0159340:intron 20.0%
!! AAATGAAAGTGACAAATTTA+CGG + chr1_4:29798696-29798715 None:intergenic 20.0%
!!! TTACTGTTACACTTTTTTTT+TGG - chr1_4:29799071-29799090 Msa0159340:intron 20.0%
!!! TTATGAAAACTTACTTGTTT+TGG - chr1_4:29799383-29799402 Msa0159340:intron 20.0%
!!! GAAATATAGGTTTTAGTAAA+TGG + chr1_4:29799448-29799467 None:intergenic 20.0%
!!! TTTTTCATGATGAGAAATAT+AGG + chr1_4:29799461-29799480 None:intergenic 20.0%
!! TATTTCTCATCATGAAAAAA+AGG - chr1_4:29799462-29799481 Msa0159340:intron 20.0%
!!! TTTGAGTTGGTTTTTTTTAA+AGG - chr1_4:29799524-29799543 Msa0159340:intron 20.0%
!!! ATATTTTTTCTTCGATGATT+TGG - chr1_4:29799816-29799835 Msa0159340:CDS 20.0%
!!! TATTTTTTCTTCGATGATTT+GGG - chr1_4:29799817-29799836 Msa0159340:CDS 20.0%
!! TATTCACATTATAAATGTAG+TGG - chr1_4:29799999-29800018 Msa0159340:CDS 20.0%
!!! CTTTTTTAATATTTGTCCTT+TGG - chr1_4:29801563-29801582 Msa0159340:intron 20.0%
!! ATTATAACACTAATTACCAA+AGG + chr1_4:29801582-29801601 None:intergenic 20.0%
!! GAGCAAAATCAAATAAATTT+CGG + chr1_4:29801883-29801902 None:intergenic 20.0%
!!! AGTTTACTACTATATTTTTC+AGG - chr1_4:29802413-29802432 Msa0159340:intron 20.0%
!! ATCAATGAAACAAATGAAAA+AGG + chr1_4:29802829-29802848 None:intergenic 20.0%
!! AGATTACTCGTAAAATAAAT+TGG - chr1_4:29803137-29803156 Msa0159340:intron 20.0%
!! GATTACTCGTAAAATAAATT+GGG - chr1_4:29803138-29803157 Msa0159340:intron 20.0%
! AACAAAGTTTGAAAAAATGC+AGG + chr1_4:29792507-29792526 None:intergenic 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG - chr1_4:29793186-29793205 Msa0159340:CDS 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - chr1_4:29793240-29793259 Msa0159340:CDS 25.0%
! TGAACTTTGAGTAATGTTTA+AGG - chr1_4:29793365-29793384 Msa0159340:intron 25.0%
! AAATATGTTTCGACATTGTA+GGG + chr1_4:29793462-29793481 None:intergenic 25.0%
! AAAATATGTTTCGACATTGT+AGG + chr1_4:29793463-29793482 None:intergenic 25.0%
!! TACAATGTCGAAACATATTT+TGG - chr1_4:29793462-29793481 Msa0159340:CDS 25.0%
! ATATTTGGGTAAATTGTTCT+GGG - chr1_4:29793692-29793711 Msa0159340:CDS 25.0%
! AGTATATTATTCAGTGTACT+AGG - chr1_4:29793730-29793749 Msa0159340:CDS 25.0%
!!! TATAACAAACACTTTAGAGT+TGG - chr1_4:29793791-29793810 Msa0159340:intron 25.0%
! AAATTCAACTACAATTCAGA+TGG - chr1_4:29794030-29794049 Msa0159340:intron 25.0%
! GTTAATGCAATTCAAATACA+TGG - chr1_4:29794052-29794071 Msa0159340:intron 25.0%
! GTATATTTGAACAAAAGTTG+TGG - chr1_4:29794166-29794185 Msa0159340:intron 25.0%
!! ATATTTGAACATGATTTGGA+TGG - chr1_4:29794230-29794249 Msa0159340:intron 25.0%
! AATACATTAATAATTCTCCC+CGG + chr1_4:29794880-29794899 None:intergenic 25.0%
! TATTTGTAAGCAACATATGT+AGG + chr1_4:29794906-29794925 None:intergenic 25.0%
! CTTACATCAAATGTTTCATT+TGG + chr1_4:29794978-29794997 None:intergenic 25.0%
! TACTCCTACTTTAATATACA+GGG + chr1_4:29795019-29795038 None:intergenic 25.0%
! ATACTCCTACTTTAATATAC+AGG + chr1_4:29795020-29795039 None:intergenic 25.0%
! TGTATATTAAAGTAGGAGTA+TGG - chr1_4:29795019-29795038 Msa0159340:intron 25.0%
!! GTATATTAAAGTAGGAGTAT+GGG - chr1_4:29795020-29795039 Msa0159340:intron 25.0%
!! TATATTAAAGTAGGAGTATG+GGG - chr1_4:29795021-29795040 Msa0159340:intron 25.0%
!!! TTAATTGTTTTTACTCTGCA+TGG - chr1_4:29795183-29795202 Msa0159340:intron 25.0%
!!! TAATTGTTTTTACTCTGCAT+GGG - chr1_4:29795184-29795203 Msa0159340:intron 25.0%
! TTCAGTCTTAGTATAACTAT+TGG + chr1_4:29795781-29795800 None:intergenic 25.0%
! CTATTAATTGAGGATTAACT+AGG + chr1_4:29795863-29795882 None:intergenic 25.0%
! CTAGTTAATCCTCAATTAAT+AGG - chr1_4:29795861-29795880 Msa0159340:intron 25.0%
! TTAATCTTCCCTATTAATTG+AGG + chr1_4:29795873-29795892 None:intergenic 25.0%
! ATCAATACAATAAATAGGGA+AGG - chr1_4:29795892-29795911 Msa0159340:intron 25.0%
! AATAGGATAGGATTAGAAAT+AGG + chr1_4:29796317-29796336 None:intergenic 25.0%
! AAACAAAAAGTGAATAGGAT+AGG + chr1_4:29796329-29796348 None:intergenic 25.0%
! ACTCATATAATCTTGAAACT+AGG - chr1_4:29796426-29796445 Msa0159340:intron 25.0%
!!! CAGATTCAATTTTTTTCCAA+TGG - chr1_4:29796493-29796512 Msa0159340:intron 25.0%
! CTGTCATAAATTAGTTAAGA+CGG - chr1_4:29796940-29796959 Msa0159340:intron 25.0%
!! ACAATGATGAAGATTTTGAA+GGG - chr1_4:29797408-29797427 Msa0159340:intron 25.0%
! GATAACTTCATGTAATCAAT+TGG + chr1_4:29797453-29797472 None:intergenic 25.0%
! ATCAATCTAGTAAAAAGGAA+AGG + chr1_4:29797515-29797534 None:intergenic 25.0%
! AGTTGAAGAAAGGAAATTAT+AGG + chr1_4:29797570-29797589 None:intergenic 25.0%
! CTCATATATAGACAATATAC+CGG + chr1_4:29797723-29797742 None:intergenic 25.0%
! GTATATTGTCTATATATGAG+AGG - chr1_4:29797723-29797742 Msa0159340:intron 25.0%
!!! AGGAAATCTTTTAGTTTATG+AGG - chr1_4:29797756-29797775 Msa0159340:intron 25.0%
!! ATTGATTCAATTCTATGACA+TGG + chr1_4:29797879-29797898 None:intergenic 25.0%
! TGATACATTAAGTATGGTAA+AGG - chr1_4:29797927-29797946 Msa0159340:intron 25.0%
!! CTACTATTCTTTAGTTCATT+TGG + chr1_4:29798307-29798326 None:intergenic 25.0%
!!! CTTGATTATTTAAGAGCATT+AGG + chr1_4:29798430-29798449 None:intergenic 25.0%
! TAATCAAGAATATATTCCAC+AGG - chr1_4:29798442-29798461 Msa0159340:intron 25.0%
! CGATTTAATTCTGTATTCAT+CGG - chr1_4:29798527-29798546 Msa0159340:intron 25.0%
!!! TTTTTAAAGGTTTCTGAATC+AGG - chr1_4:29799537-29799556 Msa0159340:intron 25.0%
! AAAACTAGATGTATTACAGA+AGG + chr1_4:29799784-29799803 None:intergenic 25.0%
! AAAACTCAGATGGTAAATAA+AGG - chr1_4:29800264-29800283 Msa0159340:intron 25.0%
! AAACTCAGATGGTAAATAAA+GGG - chr1_4:29800265-29800284 Msa0159340:intron 25.0%
!! TTCCATTTGTGTAATTGTTT+TGG - chr1_4:29801148-29801167 Msa0159340:intron 25.0%
!! TCCATTTGTGTAATTGTTTT+GGG - chr1_4:29801149-29801168 Msa0159340:intron 25.0%
!!! GAAGTTGTAATTTTAATACG+AGG + chr1_4:29801477-29801496 None:intergenic 25.0%
!!! TTGATAGAAGTTTTATCACT+GGG + chr1_4:29801504-29801523 None:intergenic 25.0%
!!! TTTGATAGAAGTTTTATCAC+TGG + chr1_4:29801505-29801524 None:intergenic 25.0%
! AGTGATAAAACTTCTATCAA+AGG - chr1_4:29801504-29801523 Msa0159340:intron 25.0%
! GTGATAAAACTTCTATCAAA+GGG - chr1_4:29801505-29801524 Msa0159340:intron 25.0%
! ATTAGTGTTATAATGAAACC+AGG - chr1_4:29801588-29801607 Msa0159340:intron 25.0%
!!! AGAAAAGGTCATTTTTCTTA+GGG + chr1_4:29801782-29801801 None:intergenic 25.0%
! CTCATTAAATTTATCAAGCA+GGG - chr1_4:29801937-29801956 Msa0159340:intron 25.0%
!!! TATGGTCATACATTTGTTTT+CGG + chr1_4:29802883-29802902 None:intergenic 25.0%
TAGCTAGCACAATTAAAAGT+GGG + chr1_4:29792329-29792348 None:intergenic 30.0%
GCAGGAAAATCAAGTAAATT+TGG + chr1_4:29792489-29792508 None:intergenic 30.0%
TCAGAATATTCAAACGTATG+AGG - chr1_4:29792550-29792569 Msa0159340:CDS 30.0%
! TTCAGGTATCTGTTGATTAA+AGG - chr1_4:29792711-29792730 Msa0159340:intron 30.0%
!! CATCTAATTTGTTGACTTTC+TGG + chr1_4:29792861-29792880 None:intergenic 30.0%
GATATTTGGGTAAATTGTTC+TGG - chr1_4:29793691-29793710 Msa0159340:CDS 30.0%
GATGATTAACGAAGATAACA+AGG - chr1_4:29794091-29794110 Msa0159340:intron 30.0%
TGTAGTTAATTGTGTTACGT+GGG + chr1_4:29794136-29794155 None:intergenic 30.0%
TTGTAGTTAATTGTGTTACG+TGG + chr1_4:29794137-29794156 None:intergenic 30.0%
CACAATTAACTACAATTCTC+AGG - chr1_4:29794142-29794161 Msa0159340:intron 30.0%
TTCAAATATACATGATGCTG+AGG + chr1_4:29794219-29794238 None:intergenic 30.0%
GATGGTTAACGAATATAACA+AGG + chr1_4:29794360-29794379 None:intergenic 30.0%
ATGTGGTAAATTACGTTTAG+TGG + chr1_4:29794390-29794409 None:intergenic 30.0%
TAAACTGACAACAATTTGGA+TGG + chr1_4:29794429-29794448 None:intergenic 30.0%
TAGAATAACCGAAAAAGGAA+AGG - chr1_4:29794611-29794630 Msa0159340:intron 30.0%
AGAATAACCGAAAAAGGAAA+GGG - chr1_4:29794612-29794631 Msa0159340:intron 30.0%
! TTGATGATTTATGGTACTGA+AGG - chr1_4:29794785-29794804 Msa0159340:intron 30.0%
!! ATTTTGTAACTTGCATTACC+CGG - chr1_4:29794858-29794877 Msa0159340:intron 30.0%
ATACATTAATAATTCTCCCC+GGG + chr1_4:29794879-29794898 None:intergenic 30.0%
! TACTCAATGCCTTTCATTTT+TGG - chr1_4:29795045-29795064 Msa0159340:intron 30.0%
!!! GTTCATTTTGTTTTAGTTGC+AGG - chr1_4:29795383-29795402 Msa0159340:intron 30.0%
!!! ATTTTGTTTTAGTTGCAGGA+TGG - chr1_4:29795387-29795406 Msa0159340:intron 30.0%
TGATTCCACATTATCATCTA+AGG + chr1_4:29795439-29795458 None:intergenic 30.0%
! GTTATTTACGTTGACTGTAT+AGG - chr1_4:29795581-29795600 Msa0159340:intron 30.0%
TATAGAACTAACTTCACTGA+AGG + chr1_4:29795623-29795642 None:intergenic 30.0%
TATTATATTATGTGGGGAGA+AGG - chr1_4:29795814-29795833 Msa0159340:intron 30.0%
! GAAGGTACATTTATATAAGC+AGG - chr1_4:29795832-29795851 Msa0159340:intron 30.0%
TTAATTGAGGATTAACTAGG+AGG + chr1_4:29795860-29795879 None:intergenic 30.0%
AGACAATGATAAGACTGATA+TGG + chr1_4:29796182-29796201 None:intergenic 30.0%
!! TTCTAATCCTTAGTTTTTGG+TGG - chr1_4:29796349-29796368 Msa0159340:intron 30.0%
GTGTTCAAAAACTATTCAGT+AGG + chr1_4:29796405-29796424 None:intergenic 30.0%
ACCTATGTTTGTTCAATCAA+TGG - chr1_4:29796466-29796485 Msa0159340:intron 30.0%
! TCCATTGATTGAACAAACAT+AGG + chr1_4:29796470-29796489 None:intergenic 30.0%
CCTGTTACATAGTATTTCAA+TGG + chr1_4:29796587-29796606 None:intergenic 30.0%
CCATTGAAATACTATGTAAC+AGG - chr1_4:29796584-29796603 Msa0159340:CDS 30.0%
GTATATGATTCCATCTTAAC+AGG - chr1_4:29796873-29796892 Msa0159340:intron 30.0%
! GAGTTTTTAACGCATAGAAA+AGG - chr1_4:29796915-29796934 Msa0159340:intron 30.0%
ATGTATTGTGTGACAGTATA+TGG + chr1_4:29797038-29797057 None:intergenic 30.0%
AAGATGCTATATTGTCAAGA+AGG - chr1_4:29797308-29797327 Msa0159340:intron 30.0%
! ATCTTTTTGCAAGCATTTTG+TGG - chr1_4:29797342-29797361 Msa0159340:intron 30.0%
CTTCAAAATCTTCATCATTG+TGG + chr1_4:29797409-29797428 None:intergenic 30.0%
! CACAATGATGAAGATTTTGA+AGG - chr1_4:29797407-29797426 Msa0159340:intron 30.0%
!! AAGATTTTGAAGGGAAAAAG+AGG - chr1_4:29797417-29797436 Msa0159340:intron 30.0%
TACATGAAGTTATCGTATTG+TGG - chr1_4:29797459-29797478 Msa0159340:intron 30.0%
ACATGAAGTTATCGTATTGT+GGG - chr1_4:29797460-29797479 Msa0159340:intron 30.0%
TGAAATAACTGCCATGTAAA+TGG - chr1_4:29797605-29797624 Msa0159340:intron 30.0%
GAAATAACTGCCATGTAAAT+GGG - chr1_4:29797606-29797625 Msa0159340:intron 30.0%
ATGCCTTTACAAGTAAAAAC+CGG - chr1_4:29797694-29797713 Msa0159340:intron 30.0%
!!! ATACCGGTTTTTACTTGTAA+AGG + chr1_4:29797700-29797719 None:intergenic 30.0%
TTCTATGACATGGCAAAATA+AGG + chr1_4:29797869-29797888 None:intergenic 30.0%
!! TAGACAGGATTCTTTTGATT+TGG + chr1_4:29798139-29798158 None:intergenic 30.0%
TAACAGATTGGATTTATCTG+AGG + chr1_4:29798174-29798193 None:intergenic 30.0%
!!! TCCAATCTGTTATTTTGAAG+TGG - chr1_4:29798182-29798201 Msa0159340:intron 30.0%
TCCACTTCAAAATAACAGAT+TGG + chr1_4:29798186-29798205 None:intergenic 30.0%
!! TTTCGTTTTTACCTTGGATT+TGG + chr1_4:29798222-29798241 None:intergenic 30.0%
CTTTGAATCTACTTTGGTAA+GGG + chr1_4:29798245-29798264 None:intergenic 30.0%
! GCAGAATATAAGGATCTTTT+AGG + chr1_4:29798279-29798298 None:intergenic 30.0%
!! AACTTTTAAAAGTAACCTGG+TGG - chr1_4:29798379-29798398 Msa0159340:intron 30.0%
! TGTTTTATAAAAGTTCCACC+AGG + chr1_4:29798397-29798416 None:intergenic 30.0%
! GTGGAACTTTTATAAAACAG+AGG - chr1_4:29798398-29798417 Msa0159340:intron 30.0%
TTATTCTATCCCTTGTCATT+AGG - chr1_4:29798764-29798783 Msa0159340:intron 30.0%
AAAGAACAACCTAATGACAA+GGG + chr1_4:29798776-29798795 None:intergenic 30.0%
!! TCTCTTTTAACTGTTAGTGT+TGG - chr1_4:29798954-29798973 Msa0159340:intron 30.0%
AGTAAACTTATAATCCCCAT+GGG + chr1_4:29799052-29799071 None:intergenic 30.0%
AAGTAAACTTATAATCCCCA+TGG + chr1_4:29799053-29799072 None:intergenic 30.0%
TTCATTTCTTACAGTGAGTA+GGG + chr1_4:29799212-29799231 None:intergenic 30.0%
ATTCATTTCTTACAGTGAGT+AGG + chr1_4:29799213-29799232 None:intergenic 30.0%
AACTCAAACTAGCCAAATAA+GGG + chr1_4:29799512-29799531 None:intergenic 30.0%
TTAAGGAAGAATTGCTTATG+TGG - chr1_4:29799610-29799629 Msa0159340:intron 30.0%
! CATTTTCAGTTGAACCTTTT+AGG - chr1_4:29799695-29799714 Msa0159340:intron 30.0%
TATCAATTATTCCAACATGC+CGG - chr1_4:29799844-29799863 Msa0159340:CDS 30.0%
TCACGATAAATTGACAATAG+AGG - chr1_4:29800145-29800164 Msa0159340:intron 30.0%
GAACACAAAACTAATGCATA+AGG - chr1_4:29800167-29800186 Msa0159340:intron 30.0%
! GAGCTTTTACATCAGTTTAT+GGG + chr1_4:29800220-29800239 None:intergenic 30.0%
! AGAGCTTTTACATCAGTTTA+TGG + chr1_4:29800221-29800240 None:intergenic 30.0%
TAAACTGATGTAAAAGCTCT+AGG - chr1_4:29800221-29800240 Msa0159340:intron 30.0%
AGAAATGAAGAAAACTCAGA+TGG - chr1_4:29800254-29800273 Msa0159340:intron 30.0%
AGATGGTAAATAAAGGGTTT+CGG - chr1_4:29800271-29800290 Msa0159340:intron 30.0%
! AGATTTTACCACTATCTGAT+GGG + chr1_4:29800313-29800332 None:intergenic 30.0%
! AAGATTTTACCACTATCTGA+TGG + chr1_4:29800314-29800333 None:intergenic 30.0%
! TCAGATAGTGGTAAAATCTT+TGG - chr1_4:29800314-29800333 Msa0159340:intron 30.0%
AGTGGTAAAATCTTTGGATA+TGG - chr1_4:29800320-29800339 Msa0159340:intron 30.0%
GTGGTAAAATCTTTGGATAT+GGG - chr1_4:29800321-29800340 Msa0159340:intron 30.0%
AAAAGTAGAGAGAAGTAAGA+AGG - chr1_4:29800350-29800369 Msa0159340:intron 30.0%
AAAGTAGAGAGAAGTAAGAA+GGG - chr1_4:29800351-29800370 Msa0159340:intron 30.0%
ATCTGACAAAGTTTGAAGAT+AGG - chr1_4:29800675-29800694 Msa0159340:CDS 30.0%
TTAGACACAATGGTATACTA+TGG - chr1_4:29800698-29800717 Msa0159340:CDS 30.0%
TTTGTGAATGGAATTGTTGA+GGG - chr1_4:29801063-29801082 Msa0159340:intron 30.0%
TCCCAAAACAATTACACAAA+TGG + chr1_4:29801153-29801172 None:intergenic 30.0%
!!! ATTTGTGTAATTGTTTTGGG+AGG - chr1_4:29801152-29801171 Msa0159340:intron 30.0%
AACACAATATACAGATCATG+TGG + chr1_4:29801208-29801227 None:intergenic 30.0%
TATTGTGTTTACTGCATTTG+TGG - chr1_4:29801219-29801238 Msa0159340:intron 30.0%
TTGTATTCCAAGTGTTAGTT+GGG - chr1_4:29801244-29801263 Msa0159340:intron 30.0%
GACGTTTCTATTTCAAATGT+TGG - chr1_4:29801651-29801670 Msa0159340:intron 30.0%
!!! CAGAAAAGGTCATTTTTCTT+AGG + chr1_4:29801783-29801802 None:intergenic 30.0%
AATCTCATTGTTATCATCAC+AGG + chr1_4:29801808-29801827 None:intergenic 30.0%
!! TTCTTGTACTCGTGTTTTTA+AGG - chr1_4:29801851-29801870 Msa0159340:intron 30.0%
! TTTTGCTCTCATAAATGTGA+TGG - chr1_4:29801895-29801914 Msa0159340:intron 30.0%
CCTGCTTGATAAATTTAATG+AGG + chr1_4:29801939-29801958 None:intergenic 30.0%
CCTCATTAAATTTATCAAGC+AGG - chr1_4:29801936-29801955 Msa0159340:intron 30.0%
ATTAAATTTATCAAGCAGGG+AGG - chr1_4:29801940-29801959 Msa0159340:intron 30.0%
GGATACAAATGGAGATTATT+TGG - chr1_4:29802221-29802240 Msa0159340:intron 30.0%
ATTATAACAGAGACACTAAC+TGG + chr1_4:29802513-29802532 None:intergenic 30.0%
CAAATAAAGTAAAGCCGTAA+AGG - chr1_4:29802665-29802684 Msa0159340:intron 30.0%
AACCAGTCTATATTCCTTTA+CGG + chr1_4:29802682-29802701 None:intergenic 30.0%
!! TTCACATATTAGCTTGCATT+TGG - chr1_4:29802712-29802731 Msa0159340:intron 30.0%
ATGACAAGTCAGTAAAGATA+TGG - chr1_4:29802973-29802992 Msa0159340:intron 30.0%
AGTAATCTACATCAACAACT+TGG + chr1_4:29803125-29803144 None:intergenic 30.0%
! AGCACAATTAAAAGTGGGTT+AGG + chr1_4:29792324-29792343 None:intergenic 35.0%
CTAGCTAGCACAATTAAAAG+TGG + chr1_4:29792330-29792349 None:intergenic 35.0%
!! CACTTTTAATTGTGCTAGCT+AGG - chr1_4:29792328-29792347 Msa0159340:three_prime_UTR 35.0%
CTGTTGATATCATCTTTGAC+TGG - chr1_4:29792351-29792370 Msa0159340:three_prime_UTR 35.0%
!! TCATCTTTGACTGGTCTAAT+TGG - chr1_4:29792360-29792379 Msa0159340:three_prime_UTR 35.0%
AATGACCAACGAAAACTTGA+TGG + chr1_4:29792414-29792433 None:intergenic 35.0%
TCAAACTTTGTTCTAGCAAG+CGG - chr1_4:29792515-29792534 Msa0159340:CDS 35.0%
! AGATTTTCGCAATGTTATGC+TGG - chr1_4:29792674-29792693 Msa0159340:intron 35.0%
TGGTATTGTGTGTCTATTTC+AGG - chr1_4:29792694-29792713 Msa0159340:intron 35.0%
TGATGGAAATCGGTGAAAAA+AGG - chr1_4:29792750-29792769 Msa0159340:intron 35.0%
! ACTCACTGTCTGTTGATTAA+AGG - chr1_4:29792779-29792798 Msa0159340:intron 35.0%
TGATGGAAATCGGTGAAAAA+AGG - chr1_4:29792750-29792769 Msa0159340:intron 35.0%
! TAGCTCTCTAAAGAATGAGA+AGG - chr1_4:29793644-29793663 Msa0159340:CDS 35.0%
!!! TGTGTCGTTTTGACACAAAA+TGG - chr1_4:29794000-29794019 Msa0159340:intron 35.0%
TCGTGGTTAATTATGTTCAG+TGG - chr1_4:29794312-29794331 Msa0159340:intron 35.0%
CGTGGTTAATTATGTTCAGT+GGG - chr1_4:29794313-29794332 Msa0159340:intron 35.0%
GTGGTTAATTATGTTCAGTG+GGG - chr1_4:29794314-29794333 Msa0159340:intron 35.0%
TTAATTATGTTCAGTGGGGA+TGG - chr1_4:29794318-29794337 Msa0159340:intron 35.0%
! AATTACGTTTAGTGGATGAC+TGG + chr1_4:29794382-29794401 None:intergenic 35.0%
CAGCTAAACTGACAACAATT+TGG + chr1_4:29794433-29794452 None:intergenic 35.0%
GTGTAAGAAAATCACGCAAA+TGG + chr1_4:29794562-29794581 None:intergenic 35.0%
ATTTCCTGTACCAGTACTAT+TGG + chr1_4:29794657-29794676 None:intergenic 35.0%
TTGACGGTTGAGAATTAGAA+GGG + chr1_4:29794688-29794707 None:intergenic 35.0%
GTATGAATAGATGGAGTTGA+CGG + chr1_4:29794704-29794723 None:intergenic 35.0%
! TCCAAGGGTTTGATGATTTA+TGG - chr1_4:29794776-29794795 Msa0159340:intron 35.0%
ACCATAAATCATCAAACCCT+TGG + chr1_4:29794780-29794799 None:intergenic 35.0%
!! ATACAAGTTGATTTACCAGC+TGG + chr1_4:29794838-29794857 None:intergenic 35.0%
!! TTTTGTAACTTGCATTACCC+GGG - chr1_4:29794859-29794878 Msa0159340:intron 35.0%
ACCACCCTGTATATTAAAGT+AGG - chr1_4:29795012-29795031 Msa0159340:intron 35.0%
TCCTACTTTAATATACAGGG+TGG + chr1_4:29795016-29795035 None:intergenic 35.0%
CTAACATTATAGATACGAGC+AGG + chr1_4:29795096-29795115 None:intergenic 35.0%
CTGCTCGTATCTATAATGTT+AGG - chr1_4:29795094-29795113 Msa0159340:intron 35.0%
!! TTGGAACATTTTGGAGATGT+TGG - chr1_4:29795411-29795430 Msa0159340:intron 35.0%
TCATTTCTCTCACAAGATGA+TGG - chr1_4:29795456-29795475 Msa0159340:intron 35.0%
! GTGATGGAAAGGACTTATTT+GGG - chr1_4:29795478-29795497 Msa0159340:intron 35.0%
! ACTTATTTGGGACGTTGAAA+CGG - chr1_4:29795490-29795509 Msa0159340:intron 35.0%
CATGCTACAGATTCTTCAAA+AGG - chr1_4:29795525-29795544 Msa0159340:intron 35.0%
AGTTCTATACGCAAAAGCAA+TGG - chr1_4:29795634-29795653 Msa0159340:intron 35.0%
CAGATTGAATAAGGATAGGA+TGG + chr1_4:29796259-29796278 None:intergenic 35.0%
CATCCTATCCTTATTCAATC+TGG - chr1_4:29796257-29796276 Msa0159340:intron 35.0%
ACACCAGATTGAATAAGGAT+AGG + chr1_4:29796263-29796282 None:intergenic 35.0%
TCCTTATTCAATCTGGTGTT+TGG - chr1_4:29796264-29796283 Msa0159340:intron 35.0%
ACCAAACACCAGATTGAATA+AGG + chr1_4:29796268-29796287 None:intergenic 35.0%
TGCTAAACCACCAAAAACTA+AGG + chr1_4:29796359-29796378 None:intergenic 35.0%
! TATGATTAGGTTGTACTGCT+TGG - chr1_4:29796851-29796870 Msa0159340:intron 35.0%
TTAGTTAAGACGGTAGAACA+CGG - chr1_4:29796950-29796969 Msa0159340:intron 35.0%
ACAGTATATGGTACCAAAGA+AGG + chr1_4:29797026-29797045 None:intergenic 35.0%
GTTCAGAAAAACACTTGACT+TGG + chr1_4:29797245-29797264 None:intergenic 35.0%
!! GTTGATTCTTTTGTTCTCCT+AGG - chr1_4:29797377-29797396 Msa0159340:intron 35.0%
GAGTGACTTTAGTTGAAGAA+AGG + chr1_4:29797580-29797599 None:intergenic 35.0%
CTTTACCAACTTCGATTACT+TGG - chr1_4:29797629-29797648 Msa0159340:intron 35.0%
TCAATCCAAGTAATCGAAGT+TGG + chr1_4:29797637-29797656 None:intergenic 35.0%
TACAAGTAAAAACCGGTATC+CGG - chr1_4:29797701-29797720 Msa0159340:intron 35.0%
ATAGACAATATACCGGATAC+CGG + chr1_4:29797716-29797735 None:intergenic 35.0%
! ATATGAGAGGGATGTTTTCT+AGG - chr1_4:29797736-29797755 Msa0159340:intron 35.0%
TATGAGGATTGTGCAGAAAT+AGG - chr1_4:29797772-29797791 Msa0159340:intron 35.0%
!!! ACATGACCATTTTTGAAGCA+TGG - chr1_4:29797806-29797825 Msa0159340:intron 35.0%
CTGTATCCATGCTTCAAAAA+TGG + chr1_4:29797815-29797834 None:intergenic 35.0%
!! TAAGGGTTTCGTTTTTACCT+TGG + chr1_4:29798228-29798247 None:intergenic 35.0%
CCTTTGAATCTACTTTGGTA+AGG + chr1_4:29798246-29798265 None:intergenic 35.0%
CCTTACCAAAGTAGATTCAA+AGG - chr1_4:29798243-29798262 Msa0159340:intron 35.0%
ACCAAAGTAGATTCAAAGGA+AGG - chr1_4:29798247-29798266 Msa0159340:intron 35.0%
CCAAAGTAGATTCAAAGGAA+GGG - chr1_4:29798248-29798267 Msa0159340:intron 35.0%
! TTTGGTGACAGCAGAATATA+AGG + chr1_4:29798289-29798308 None:intergenic 35.0%
GTGAGGCCAATATTATTTGA+TGG + chr1_4:29798340-29798359 None:intergenic 35.0%
ATTCTGTATTCATCGGATGT+TGG - chr1_4:29798534-29798553 Msa0159340:intron 35.0%
GGATACTAGAAGTAAACTTC+TGG + chr1_4:29798596-29798615 None:intergenic 35.0%
GTTTACTTCTAGTATCCGTA+TGG - chr1_4:29798599-29798618 Msa0159340:intron 35.0%
TTCTAGTATCCGTATGGTAT+GGG - chr1_4:29798605-29798624 Msa0159340:intron 35.0%
AAACTGGAGTGAATGATTCA+TGG - chr1_4:29798633-29798652 Msa0159340:intron 35.0%
AACTGGAGTGAATGATTCAT+GGG - chr1_4:29798634-29798653 Msa0159340:intron 35.0%
CAAAGAACAACCTAATGACA+AGG + chr1_4:29798777-29798796 None:intergenic 35.0%
! CTTGTCATTAGGTTGTTCTT+TGG - chr1_4:29798775-29798794 Msa0159340:intron 35.0%
!! TTAGGTTGTTCTTTGGAACA+TGG - chr1_4:29798782-29798801 Msa0159340:intron 35.0%
ATAATAACAGTGTGTTCCTC+TGG + chr1_4:29798831-29798850 None:intergenic 35.0%
TGTTATAATCCCGTATACAC+AGG + chr1_4:29798995-29799014 None:intergenic 35.0%
! ATTCAATTTTCTCTTCCCCA+TGG - chr1_4:29799033-29799052 Msa0159340:intron 35.0%
! TTCAATTTTCTCTTCCCCAT+GGG - chr1_4:29799034-29799053 Msa0159340:intron 35.0%
GTAAACTTATAATCCCCATG+GGG + chr1_4:29799051-29799070 None:intergenic 35.0%
AGTATACCTGTCTTATGTTG+TGG - chr1_4:29799107-29799126 Msa0159340:intron 35.0%
GTATACCTGTCTTATGTTGT+GGG - chr1_4:29799108-29799127 Msa0159340:intron 35.0%
AATGAATGCCAGTATTGTCT+AGG - chr1_4:29799226-29799245 Msa0159340:intron 35.0%
TCATGCAATTCACCCTTATT+TGG - chr1_4:29799497-29799516 Msa0159340:intron 35.0%
CAACTCAAACTAGCCAAATA+AGG + chr1_4:29799513-29799532 None:intergenic 35.0%
!! CTTATTTGGCTAGTTTGAGT+TGG - chr1_4:29799511-29799530 Msa0159340:intron 35.0%
TAAAGGTTTCTGAATCAGGT+AGG - chr1_4:29799541-29799560 Msa0159340:intron 35.0%
!! TTCAGTTGAACCTTTTAGGT+TGG - chr1_4:29799699-29799718 Msa0159340:intron 35.0%
!!! TCAGTTGAACCTTTTAGGTT+GGG - chr1_4:29799700-29799719 Msa0159340:intron 35.0%
CTTTAATGAGCAATAGTTGC+AGG - chr1_4:29799743-29799762 Msa0159340:intron 35.0%
TATTACAGAAGGAAATCCCT+CGG + chr1_4:29799773-29799792 None:intergenic 35.0%
GGCATGTTGGAATAATTGAT+AGG + chr1_4:29799845-29799864 None:intergenic 35.0%
! TCCTCAATCTTTGATAACAC+TGG + chr1_4:29799883-29799902 None:intergenic 35.0%
TATCAAAGATTGAGGACATG+TGG - chr1_4:29799887-29799906 Msa0159340:intron 35.0%
ATCAAAGATTGAGGACATGT+GGG - chr1_4:29799888-29799907 Msa0159340:intron 35.0%
GTGCATCAACAGGATATTAT+GGG - chr1_4:29799919-29799938 Msa0159340:intron 35.0%
CAAAAAACCTTTCAGCTCTA+GGG + chr1_4:29799966-29799985 None:intergenic 35.0%
TCAAAAAACCTTTCAGCTCT+AGG + chr1_4:29799967-29799986 None:intergenic 35.0%
AAAACTAATGCATAAGGTCC+AGG - chr1_4:29800173-29800192 Msa0159340:intron 35.0%
TTGGCAAACATCTGATGTTT+CGG - chr1_4:29800374-29800393 Msa0159340:intron 35.0%
ACCATATGCACTAGAATTGT+CGG - chr1_4:29800460-29800479 Msa0159340:intron 35.0%
TGAAGATAGGTTAGACACAA+TGG - chr1_4:29800688-29800707 Msa0159340:CDS 35.0%
ACAATGGTATACTATGGTGT+AGG - chr1_4:29800704-29800723 Msa0159340:CDS 35.0%
TTACTCTATAACTCTCACCT+GGG + chr1_4:29800823-29800842 None:intergenic 35.0%
TTTACTCTATAACTCTCACC+TGG + chr1_4:29800824-29800843 None:intergenic 35.0%
ATTGGAGACAGAATCAACAT+GGG + chr1_4:29800874-29800893 None:intergenic 35.0%
TATTGGAGACAGAATCAACA+TGG + chr1_4:29800875-29800894 None:intergenic 35.0%
GTTTGTGAATGGAATTGTTG+AGG - chr1_4:29801062-29801081 Msa0159340:intron 35.0%
ACAAGTGAATAACCAGAAAG+AGG - chr1_4:29801105-29801124 Msa0159340:intron 35.0%
!! TCATGGGTTTGGTGTTAAAA+TGG - chr1_4:29801180-29801199 Msa0159340:intron 35.0%
CTTGTATTCCAAGTGTTAGT+TGG - chr1_4:29801243-29801262 Msa0159340:intron 35.0%
AGGAAGAACTCAATAATTGC+AGG - chr1_4:29801298-29801317 Msa0159340:intron 35.0%
TGCAGGTTTGAAAGTTATGA+TGG - chr1_4:29801315-29801334 Msa0159340:intron 35.0%
AAAGTTATGATGGCACAGAT+TGG - chr1_4:29801325-29801344 Msa0159340:intron 35.0%
AAGTTATGATGGCACAGATT+GGG - chr1_4:29801326-29801345 Msa0159340:intron 35.0%
GTAGACAGAAATTAACCACT+TGG - chr1_4:29801420-29801439 Msa0159340:intron 35.0%
AAACGTCATACTATTGTCCA+AGG + chr1_4:29801638-29801657 None:intergenic 35.0%
!! AATGTTGGTTTGCTTAAAGC+TGG - chr1_4:29801666-29801685 Msa0159340:intron 35.0%
TTTCTTAGGGTGGAAATCAA+GGG + chr1_4:29801769-29801788 None:intergenic 35.0%
! TTTTCTTAGGGTGGAAATCA+AGG + chr1_4:29801770-29801789 None:intergenic 35.0%
!!! AAAGGTCATTTTTCTTAGGG+TGG + chr1_4:29801779-29801798 None:intergenic 35.0%
TATCATCACAGGAACAGAAA+AGG + chr1_4:29801797-29801816 None:intergenic 35.0%
ATAACAATGAGATTCGCTTC+TGG - chr1_4:29801814-29801833 Msa0159340:intron 35.0%
ACTCATTACAGGTGTAAACA+AGG - chr1_4:29802064-29802083 Msa0159340:intron 35.0%
GTCAAGAATCTGTCAAAGTT+TGG - chr1_4:29802253-29802272 Msa0159340:intron 35.0%
AGAATGAAACATGTTTCCAC+TGG + chr1_4:29802316-29802335 None:intergenic 35.0%
TAAATAAGCAGTCATTGGCA+GGG + chr1_4:29802632-29802651 None:intergenic 35.0%
ATAAATAAGCAGTCATTGGC+AGG + chr1_4:29802633-29802652 None:intergenic 35.0%
GACGATAAATAAGCAGTCAT+TGG + chr1_4:29802637-29802656 None:intergenic 35.0%
! CATTGATGACTTACAGTCAT+TGG - chr1_4:29802842-29802861 Msa0159340:intron 35.0%
!! CTTTGACTGGTCTAATTGGA+TGG - chr1_4:29792364-29792383 Msa0159340:three_prime_UTR 40.0%
! TGTTGCCATCAAGTTTTCGT+TGG - chr1_4:29792406-29792425 Msa0159340:three_prime_UTR 40.0%
! AGTTTTCGTTGGTCATTGCA+TGG - chr1_4:29792417-29792436 Msa0159340:three_prime_UTR 40.0%
CGTATGAGGTTGCATGATAA+AGG - chr1_4:29792564-29792583 Msa0159340:CDS 40.0%
TGATAAAGGAGTTCAGTGTC+CGG - chr1_4:29792578-29792597 Msa0159340:CDS 40.0%
! CGCGTCAAAATGATGGAAAT+CGG - chr1_4:29792740-29792759 Msa0159340:intron 40.0%
! CGCGTCAAAATGATGGAAAT+CGG - chr1_4:29792740-29792759 Msa0159340:intron 40.0%
CGATGAAGAAGTTGTGTTTG+CGG + chr1_4:29793069-29793088 None:intergenic 40.0%
GAAGAGAGGAGAACAAAGAT+GGG + chr1_4:29793148-29793167 None:intergenic 40.0%
TGAAGAGAGGAGAACAAAGA+TGG + chr1_4:29793149-29793168 None:intergenic 40.0%
TGCAATCAAGTGATGAAGAG+AGG + chr1_4:29793162-29793181 None:intergenic 40.0%
!! GGGTAAATTGTTCTGGGTTT+TGG - chr1_4:29793698-29793717 Msa0159340:CDS 40.0%
TATTCAGTGTACTAGGCTAG+TGG - chr1_4:29793737-29793756 Msa0159340:CDS 40.0%
CAAAGGATCATGTTGTTGCT+GGG + chr1_4:29793931-29793950 None:intergenic 40.0%
AGTTAATTGTGTTACGTGGG+CGG + chr1_4:29794133-29794152 None:intergenic 40.0%
ACACCTGAAAATCGTGCTTA+AGG - chr1_4:29794279-29794298 Msa0159340:intron 40.0%
! TGTCCTTAAGCACGATTTTC+AGG + chr1_4:29794285-29794304 None:intergenic 40.0%
CTTAAGGACATTCAAAGTCG+TGG - chr1_4:29794295-29794314 Msa0159340:intron 40.0%
GTTAACGCCGTTCAAATATG+TGG + chr1_4:29794407-29794426 None:intergenic 40.0%
! ATGTAGGCCCTTTCCTTTTT+CGG + chr1_4:29794622-29794641 None:intergenic 40.0%
ACTGGTACAGGAAATACACT+TGG - chr1_4:29794662-29794681 Msa0159340:intron 40.0%
GTTGACGGTTGAGAATTAGA+AGG + chr1_4:29794689-29794708 None:intergenic 40.0%
ACTCCATCTATTCATACTCC+TGG - chr1_4:29794707-29794726 Msa0159340:intron 40.0%
! TCACCAGGAGTATGAATAGA+TGG + chr1_4:29794713-29794732 None:intergenic 40.0%
TCTATTCATACTCCTGGTGA+TGG - chr1_4:29794713-29794732 Msa0159340:intron 40.0%
AATGTTGCTGGTGTATCCAA+GGG - chr1_4:29794761-29794780 Msa0159340:intron 40.0%
! ATTTATGGTACTGAAGGAGC+AGG - chr1_4:29794791-29794810 Msa0159340:intron 40.0%
!! TTGATTTACCAGCTGGTTTG+TGG + chr1_4:29794831-29794850 None:intergenic 40.0%
! TTTGTAACTTGCATTACCCG+GGG - chr1_4:29794860-29794879 Msa0159340:intron 40.0%
AAATAGCCGATCTCACTTAG+TGG - chr1_4:29794921-29794940 Msa0159340:intron 40.0%
AATAGCCGATCTCACTTAGT+GGG - chr1_4:29794922-29794941 Msa0159340:intron 40.0%
CTTATCCCACTAAGTGAGAT+CGG + chr1_4:29794930-29794949 None:intergenic 40.0%
! GATACGAGCAGGAATCTTTT+CGG + chr1_4:29795085-29795104 None:intergenic 40.0%
! TGGCTCCTTAGATGATAATG+TGG - chr1_4:29795431-29795450 Msa0159340:intron 40.0%
!! ACAAGATGATGGTGATGGAA+AGG - chr1_4:29795467-29795486 Msa0159340:intron 40.0%
!! GGTGATGGAAAGGACTTATT+TGG - chr1_4:29795477-29795496 Msa0159340:intron 40.0%
TGAAGAATCTGTAGCATGCT+CGG + chr1_4:29795523-29795542 None:intergenic 40.0%
TGACTGTATAGGTCCATTTC+AGG - chr1_4:29795592-29795611 Msa0159340:intron 40.0%
ACTGAAGGAAAAGCCTGAAA+TGG + chr1_4:29795608-29795627 None:intergenic 40.0%
! TGCTGTCATTTCTCTTCAGA+TGG - chr1_4:29795667-29795686 Msa0159340:intron 40.0%
! GCTGTCATTTCTCTTCAGAT+GGG - chr1_4:29795668-29795687 Msa0159340:intron 40.0%
ATCATTGTCTGCTCCTGTTA+CGG - chr1_4:29796192-29796211 Msa0159340:intron 40.0%
TCCTTATCATGTGCACCAAT+CGG + chr1_4:29796219-29796238 None:intergenic 40.0%
CAGGTTCTGCTATCATCATT+TGG - chr1_4:29796603-29796622 Msa0159340:CDS 40.0%
CACTTATTCTGTCATGCGTT+TGG + chr1_4:29796796-29796815 None:intergenic 40.0%
GTCTATCCTGTCACTATAGA+AGG - chr1_4:29796815-29796834 Msa0159340:intron 40.0%
CAAATGCCTTCTATAGTGAC+AGG + chr1_4:29796824-29796843 None:intergenic 40.0%
TGATTCCATCTTAACAGGCA+TGG - chr1_4:29796878-29796897 Msa0159340:intron 40.0%
GATTCCATCTTAACAGGCAT+GGG - chr1_4:29796879-29796898 Msa0159340:intron 40.0%
TTTACCCATGCCTGTTAAGA+TGG + chr1_4:29796886-29796905 None:intergenic 40.0%
ATCTCGTGTCTATCCTTCTT+TGG - chr1_4:29797010-29797029 Msa0159340:intron 40.0%
ACAGAGGCTATATGACTATG+TGG + chr1_4:29797083-29797102 None:intergenic 40.0%
! CACTCGAAAGATTAAGTTGC+CGG - chr1_4:29797121-29797140 Msa0159340:intron 40.0%
! ACTCGAAAGATTAAGTTGCC+GGG - chr1_4:29797122-29797141 Msa0159340:intron 40.0%
CATCATTGTGGATTTAGCCT+AGG + chr1_4:29797397-29797416 None:intergenic 40.0%
! GTTGGTAAAGCCCATTTACA+TGG + chr1_4:29797619-29797638 None:intergenic 40.0%
TATGGTAAAGGACAGCCATT+TGG - chr1_4:29797939-29797958 Msa0159340:intron 40.0%
TGAGCAGAAAACCAAATCCA+AGG - chr1_4:29798208-29798227 Msa0159340:intron 40.0%
CCCTTCCTTTGAATCTACTT+TGG + chr1_4:29798251-29798270 None:intergenic 40.0%
AACAAAACTAGGGAGTAGTG+AGG + chr1_4:29798357-29798376 None:intergenic 40.0%
GAATATATTCCACAGGTAGC+TGG - chr1_4:29798449-29798468 Msa0159340:intron 40.0%
CTTCTAGTATCCGTATGGTA+TGG - chr1_4:29798604-29798623 Msa0159340:intron 40.0%
TCTAGTATCCGTATGGTATG+GGG - chr1_4:29798606-29798625 Msa0159340:intron 40.0%
! GTTTTTCTCCCCATACCATA+CGG + chr1_4:29798617-29798636 None:intergenic 40.0%
TATGGTATGGGGAGAAAAAC+TGG - chr1_4:29798617-29798636 Msa0159340:intron 40.0%
CTTCGTTTGATACAACTGTG+CGG - chr1_4:29798895-29798914 Msa0159340:intron 40.0%
TACACAGGAAAGACAAGGAA+AGG + chr1_4:29798980-29798999 None:intergenic 40.0%
CCTTGTCTTTCCTGTGTATA+CGG - chr1_4:29798982-29799001 Msa0159340:intron 40.0%
CTTGTCTTTCCTGTGTATAC+GGG - chr1_4:29798983-29799002 Msa0159340:intron 40.0%
! TCAATTTTCTCTTCCCCATG+GGG - chr1_4:29799035-29799054 Msa0159340:intron 40.0%
AGTTAAGGAGTGGAGTGATA+AGG + chr1_4:29799154-29799173 None:intergenic 40.0%
!! AGGATATAAGGTTGGTTTGG+TGG + chr1_4:29799189-29799208 None:intergenic 40.0%
ATTTCTTACAGTGAGTAGGG+AGG + chr1_4:29799209-29799228 None:intergenic 40.0%
TTTGGGCCTAATCCCAATAA+AGG - chr1_4:29799572-29799591 Msa0159340:intron 40.0%
TTGGGCCTAATCCCAATAAA+GGG - chr1_4:29799573-29799592 Msa0159340:intron 40.0%
TCAACCCCTTTATTGGGATT+AGG + chr1_4:29799581-29799600 None:intergenic 40.0%
AGAATTGCTTATGTGGCAGT+TGG - chr1_4:29799617-29799636 Msa0159340:intron 40.0%
! ATGAGTGTAGTGGAGGAAAA+TGG - chr1_4:29799653-29799672 Msa0159340:intron 40.0%
! TGTAGTGGAGGAAAATGGTA+AGG - chr1_4:29799658-29799677 Msa0159340:intron 40.0%
! GTAGTGGAGGAAAATGGTAA+GGG - chr1_4:29799659-29799678 Msa0159340:intron 40.0%
AATAGTTGCAGGTTTACCGA+GGG - chr1_4:29799754-29799773 Msa0159340:intron 40.0%
GCCAGTGTTATCAAAGATTG+AGG - chr1_4:29799879-29799898 Msa0159340:intron 40.0%
GGTGCATCAACAGGATATTA+TGG - chr1_4:29799918-29799937 Msa0159340:intron 40.0%
ATTATGGGAATGCATCCCTT+TGG - chr1_4:29799934-29799953 Msa0159340:intron 40.0%
TTATGGGAATGCATCCCTTT+GGG - chr1_4:29799935-29799954 Msa0159340:intron 40.0%
!! AAATAAAGGGTTTCGGTGTC+TGG - chr1_4:29800278-29800297 Msa0159340:intron 40.0%
GATACATTCCCATCAGATAG+TGG - chr1_4:29800302-29800321 Msa0159340:intron 40.0%
TAGAGAGAAGTAAGAAGGGT+TGG - chr1_4:29800355-29800374 Msa0159340:intron 40.0%
TCCGACAATTCTAGTGCATA+TGG + chr1_4:29800464-29800483 None:intergenic 40.0%
!! TAGGGTTCTGATTTGGGTAT+GGG + chr1_4:29800541-29800560 None:intergenic 40.0%
! AGTGTCTAGGGTTCTGATTT+GGG + chr1_4:29800547-29800566 None:intergenic 40.0%
! TAGTGTCTAGGGTTCTGATT+TGG + chr1_4:29800548-29800567 None:intergenic 40.0%
TGAGGTTGAACAGTTCATCA+TGG - chr1_4:29800637-29800656 Msa0159340:intron 40.0%
GAGGTTGAACAGTTCATCAT+GGG - chr1_4:29800638-29800657 Msa0159340:intron 40.0%
CCTTTACTTTCTGAGCACAT+GGG + chr1_4:29800770-29800789 None:intergenic 40.0%
ACCTTTACTTTCTGAGCACA+TGG + chr1_4:29800771-29800790 None:intergenic 40.0%
CAGAAAGTAAAGGTCACACA+AGG - chr1_4:29800777-29800796 Msa0159340:CDS 40.0%
TATAACTCTCACCTGGGTTT+GGG + chr1_4:29800817-29800836 None:intergenic 40.0%
TTGGAGACAGAATCAACATG+GGG + chr1_4:29800873-29800892 None:intergenic 40.0%
GAATGATACGCGTCTAGTAT+TGG + chr1_4:29800892-29800911 None:intergenic 40.0%
ATTCCCACTACAATTCTGAC+CGG - chr1_4:29800908-29800927 Msa0159340:intron 40.0%
GTCTTTGTTGCTGCAATCTA+TGG - chr1_4:29800941-29800960 Msa0159340:intron 40.0%
CATAGGATGTACACACCAAA+GGG + chr1_4:29801023-29801042 None:intergenic 40.0%
TCATAGGATGTACACACCAA+AGG + chr1_4:29801024-29801043 None:intergenic 40.0%
!! CACAAACTGTGCTGCTTAAA+GGG + chr1_4:29801049-29801068 None:intergenic 40.0%
!! TCACAAACTGTGCTGCTTAA+AGG + chr1_4:29801050-29801069 None:intergenic 40.0%
TAAGCAGCACAGTTTGTGAA+TGG - chr1_4:29801051-29801070 Msa0159340:intron 40.0%
CAAAACGTACAACCTCTTTC+TGG + chr1_4:29801120-29801139 None:intergenic 40.0%
!!! TGTTTTGGGAGGAAAGTTCA+TGG - chr1_4:29801163-29801182 Msa0159340:intron 40.0%
!!! GTTTTGGGAGGAAAGTTCAT+GGG - chr1_4:29801164-29801183 Msa0159340:intron 40.0%
AGCAAAACCCAACTAACACT+TGG + chr1_4:29801254-29801273 None:intergenic 40.0%
! TTAGTTGGGTTTTGCTTCAG+TGG - chr1_4:29801258-29801277 Msa0159340:intron 40.0%
! TAGTTGGGTTTTGCTTCAGT+GGG - chr1_4:29801259-29801278 Msa0159340:intron 40.0%
GACAGAAATTAACCACTTGG+TGG - chr1_4:29801423-29801442 Msa0159340:intron 40.0%
!! ATTAACCACTTGGTGGTGTA+AGG - chr1_4:29801430-29801449 Msa0159340:intron 40.0%
!! AGGTATAAGCATTGAACACC+TGG + chr1_4:29801609-29801628 None:intergenic 40.0%
TGCTTATACCTCTTATGCCT+TGG - chr1_4:29801618-29801637 Msa0159340:intron 40.0%
ACTATTGTCCAAGGCATAAG+AGG + chr1_4:29801629-29801648 None:intergenic 40.0%
GCTGCAAAAGTAATAGCCAA+AGG + chr1_4:29801698-29801717 None:intergenic 40.0%
CTTTCTTTGCAGGCATATAG+CGG - chr1_4:29801723-29801742 Msa0159340:intron 40.0%
TCTTTGATGTTGAGACTGAC+AGG - chr1_4:29802034-29802053 Msa0159340:intron 40.0%
!! ATGTATTTCTAGGGACACTC+TGG - chr1_4:29802177-29802196 Msa0159340:intron 40.0%
!! TGTATTTCTAGGGACACTCT+GGG - chr1_4:29802178-29802197 Msa0159340:intron 40.0%
TGTGTATGCTGGGATACAAA+TGG - chr1_4:29802210-29802229 Msa0159340:intron 40.0%
TACTCCAACCTCTTGGTTAT+CGG - chr1_4:29802354-29802373 Msa0159340:intron 40.0%
TTGATATGTGCAGACATACC+TGG + chr1_4:29802386-29802405 None:intergenic 40.0%
GGGTTAAGCAACGTAATCAT+TGG + chr1_4:29802585-29802604 None:intergenic 40.0%
AAATAAGCAGTCATTGGCAG+GGG + chr1_4:29802631-29802650 None:intergenic 40.0%
AGCCGTAAAGGAATATAGAC+TGG - chr1_4:29802677-29802696 Msa0159340:intron 40.0%
ACTTACAGTCATTGGAGCTA+TGG - chr1_4:29802850-29802869 Msa0159340:intron 40.0%
!! CTTTACTGACTTGTCATGAC+TGG + chr1_4:29802970-29802989 None:intergenic 40.0%
! GAAATAAAAAGTGCGACGCT+CGG - chr1_4:29802995-29803014 Msa0159340:intron 40.0%
CTAATTGGATGGCGTGGAAT+TGG - chr1_4:29792375-29792394 Msa0159340:three_prime_UTR 45.0%
! ATGGCGTGGAATTGGTTTAG+AGG - chr1_4:29792383-29792402 Msa0159340:three_prime_UTR 45.0%
CGTGTTATCAGACTGTTGTC+CGG + chr1_4:29792600-29792619 None:intergenic 45.0%
TAGATGAGAAAGTCAACGCC+AGG - chr1_4:29792875-29792894 Msa0159340:intron 45.0%
GATGAGATGAGAAGAGGAGA+TGG + chr1_4:29793108-29793127 None:intergenic 45.0%
GGAGATGATGAGATGAGAAG+AGG + chr1_4:29793114-29793133 None:intergenic 45.0%
! CAAAGATGGGTTCTGCAATC+AGG + chr1_4:29793135-29793154 None:intergenic 45.0%
!! GCTTTAGAGGCTTACAGTGT+TGG - chr1_4:29793253-29793272 Msa0159340:CDS 45.0%
ACATTGTAGGGACCATTTGG+TGG + chr1_4:29793450-29793469 None:intergenic 45.0%
TCGACATTGTAGGGACCATT+TGG + chr1_4:29793453-29793472 None:intergenic 45.0%
CAGTGTTTGACAATGAGGGT+AGG + chr1_4:29793505-29793524 None:intergenic 45.0%
GGAGCAGTGTTTGACAATGA+GGG + chr1_4:29793509-29793528 None:intergenic 45.0%
TGGAGCAGTGTTTGACAATG+AGG + chr1_4:29793510-29793529 None:intergenic 45.0%
AATCCTGGTCTAATGCCAAG+AGG + chr1_4:29793545-29793564 None:intergenic 45.0%
TCTTGGCATTAGACCAGGAT+TGG - chr1_4:29793544-29793563 Msa0159340:intron 45.0%
!! GAGATGGATTGTTGCATCTG+TGG + chr1_4:29793909-29793928 None:intergenic 45.0%
ATCATGTTGTTGCTGGGAGA+TGG + chr1_4:29793925-29793944 None:intergenic 45.0%
GCAAAGGATCATGTTGTTGC+TGG + chr1_4:29793932-29793951 None:intergenic 45.0%
TCCTTTGCATTCACAGCAAC+TGG - chr1_4:29793944-29793963 Msa0159340:intron 45.0%
ACCAGTTGCTGTGAATGCAA+AGG + chr1_4:29793948-29793967 None:intergenic 45.0%
! ACGTTTAGTGGATGACTGGA+TGG + chr1_4:29794378-29794397 None:intergenic 45.0%
GAATGTTGCTGGTGTATCCA+AGG - chr1_4:29794760-29794779 Msa0159340:intron 45.0%
CGATCTCACTTAGTGGGATA+AGG - chr1_4:29794928-29794947 Msa0159340:intron 45.0%
TCACTTAGTGGGATAAGGCT+TGG - chr1_4:29794933-29794952 Msa0159340:intron 45.0%
!!! GTTTTAGTTGCAGGATGGCT+TGG - chr1_4:29795392-29795411 Msa0159340:intron 45.0%
!! CAGGATGGCTTGGAACATTT+TGG - chr1_4:29795402-29795421 Msa0159340:intron 45.0%
! CTCTCACAAGATGATGGTGA+TGG - chr1_4:29795462-29795481 Msa0159340:intron 45.0%
GGGAAATTATTAGCCAGTGC+TGG - chr1_4:29795688-29795707 Msa0159340:intron 45.0%
CCTTATCATGTGCACCAATC+GGG + chr1_4:29796218-29796237 None:intergenic 45.0%
GGTGCACATGATAAGGAGAT+AGG - chr1_4:29796222-29796241 Msa0159340:intron 45.0%
!! CTGGTGTTTGGTGCATCAAT+AGG - chr1_4:29796276-29796295 Msa0159340:intron 45.0%
GACACGAGATACTCAGTGTT+TGG + chr1_4:29797000-29797019 None:intergenic 45.0%
CAAGAAGACAGCAGACCAAA+TGG + chr1_4:29797957-29797976 None:intergenic 45.0%
GTAGATTCAAAGGAAGGGAG+AGG - chr1_4:29798253-29798272 Msa0159340:intron 45.0%
! CGGATGTTGGCATGTTTTTC+TGG - chr1_4:29798547-29798566 Msa0159340:intron 45.0%
CAGACCAAATTCAACTCAGC+TGG - chr1_4:29798866-29798885 Msa0159340:intron 45.0%
! GTTGCCAGCTGAGTTGAATT+TGG + chr1_4:29798873-29798892 None:intergenic 45.0%
TTGATACAACTGTGCGGCTT+TGG - chr1_4:29798901-29798920 Msa0159340:intron 45.0%
TGATACAACTGTGCGGCTTT+GGG - chr1_4:29798902-29798921 Msa0159340:intron 45.0%
CCGTATACACAGGAAAGACA+AGG + chr1_4:29798985-29799004 None:intergenic 45.0%
TACCTGTCTTATGTTGTGGG+TGG - chr1_4:29799111-29799130 Msa0159340:intron 45.0%
ACCTGTCTTATGTTGTGGGT+GGG - chr1_4:29799112-29799131 Msa0159340:intron 45.0%
TGGAGTGATAAGGAGGTTGA+GGG + chr1_4:29799144-29799163 None:intergenic 45.0%
TAAGGAGTGGAGTGATAAGG+AGG + chr1_4:29799151-29799170 None:intergenic 45.0%
!! ATAAGGTTGGTTTGGTGGCT+GGG + chr1_4:29799184-29799203 None:intergenic 45.0%
!! TATAAGGTTGGTTTGGTGGC+TGG + chr1_4:29799185-29799204 None:intergenic 45.0%
! GGGAGGATATAAGGTTGGTT+TGG + chr1_4:29799192-29799211 None:intergenic 45.0%
GAGTAGGGAGGATATAAGGT+TGG + chr1_4:29799197-29799216 None:intergenic 45.0%
CAGTGAGTAGGGAGGATATA+AGG + chr1_4:29799201-29799220 None:intergenic 45.0%
ACACAGCACCTAGACAATAC+TGG + chr1_4:29799237-29799256 None:intergenic 45.0%
! ATTGTCTAGGTGCTGTGTCT+AGG - chr1_4:29799239-29799258 Msa0159340:intron 45.0%
GATGATTAACCAATGCCCCT+GGG - chr1_4:29799405-29799424 Msa0159340:intron 45.0%
ATGATTAACCAATGCCCCTG+GGG - chr1_4:29799406-29799425 Msa0159340:intron 45.0%
!! AATGTTAAAGAGTGCCCCAG+GGG + chr1_4:29799423-29799442 None:intergenic 45.0%
!! GAATGTTAAAGAGTGCCCCA+GGG + chr1_4:29799424-29799443 None:intergenic 45.0%
!! AGAATGTTAAAGAGTGCCCC+AGG + chr1_4:29799425-29799444 None:intergenic 45.0%
TCTGAATCAGGTAGGATACC+TGG - chr1_4:29799549-29799568 Msa0159340:intron 45.0%
ATCAGGTAGGATACCTGGTT+TGG - chr1_4:29799554-29799573 Msa0159340:intron 45.0%
TCAGGTAGGATACCTGGTTT+GGG - chr1_4:29799555-29799574 Msa0159340:intron 45.0%
TGGGCCTAATCCCAATAAAG+GGG - chr1_4:29799574-29799593 Msa0159340:intron 45.0%
TCCCAATAAAGGGGTTGAGT+AGG - chr1_4:29799583-29799602 Msa0159340:intron 45.0%
CCCTACTCAACCCCTTTATT+GGG + chr1_4:29799587-29799606 None:intergenic 45.0%
CCCAATAAAGGGGTTGAGTA+GGG - chr1_4:29799584-29799603 Msa0159340:intron 45.0%
TCCCTACTCAACCCCTTTAT+TGG + chr1_4:29799588-29799607 None:intergenic 45.0%
ATTGCTTATGTGGCAGTTGG+TGG - chr1_4:29799620-29799639 Msa0159340:intron 45.0%
TTGCTTATGTGGCAGTTGGT+GGG - chr1_4:29799621-29799640 Msa0159340:intron 45.0%
TAGGCAAATGAGTGTAGTGG+AGG - chr1_4:29799646-29799665 Msa0159340:intron 45.0%
CAATAGTTGCAGGTTTACCG+AGG - chr1_4:29799753-29799772 Msa0159340:intron 45.0%
! TGAGGACATGTGGGCTAATA+AGG - chr1_4:29799897-29799916 Msa0159340:intron 45.0%
GGCTAATAAGGTGCATCAAC+AGG - chr1_4:29799909-29799928 Msa0159340:intron 45.0%
TGTAGTGGTGTTCATGAGCA+TGG - chr1_4:29800014-29800033 Msa0159340:CDS 45.0%
CCAAGACTGAAACCAAAGCA+TGG + chr1_4:29800049-29800068 None:intergenic 45.0%
! CCATGCTTTGGTTTCAGTCT+TGG - chr1_4:29800046-29800065 Msa0159340:CDS 45.0%
! TTTATCGTGATGCACTGACG+CGG + chr1_4:29800135-29800154 None:intergenic 45.0%
AAGGTCCAGGTGAGATGAAT+AGG - chr1_4:29800186-29800205 Msa0159340:intron 45.0%
AGGTCCAGGTGAGATGAATA+GGG - chr1_4:29800187-29800206 Msa0159340:intron 45.0%
TCTTCCCTATTCATCTCACC+TGG + chr1_4:29800194-29800213 None:intergenic 45.0%
TTCAACCGCTACATGTGGTT+TGG + chr1_4:29800489-29800508 None:intergenic 45.0%
TTCTCTTCAACCGCTACATG+TGG + chr1_4:29800494-29800513 None:intergenic 45.0%
!! AGGGTTCTGATTTGGGTATG+GGG + chr1_4:29800540-29800559 None:intergenic 45.0%
!! CTAGGGTTCTGATTTGGGTA+TGG + chr1_4:29800542-29800561 None:intergenic 45.0%
CTCAAGTGGTCTAGTGTCTA+GGG + chr1_4:29800559-29800578 None:intergenic 45.0%
GAAACAAGTGAACCAATGGC+TGG + chr1_4:29800606-29800625 None:intergenic 45.0%
GGTGGAAACAAGTGAACCAA+TGG + chr1_4:29800610-29800629 None:intergenic 45.0%
TTGTTTCCACCTGTGAGTTG+AGG - chr1_4:29800619-29800638 Msa0159340:intron 45.0%
ACTGTTCAACCTCAACTCAC+AGG + chr1_4:29800631-29800650 None:intergenic 45.0%
! AGGTTTCGCTCTAGACCTTA+CGG - chr1_4:29800724-29800743 Msa0159340:CDS 45.0%
! CACATGGGCTATCTCAATGT+GGG + chr1_4:29800755-29800774 None:intergenic 45.0%
CCCATGTGCTCAGAAAGTAA+AGG - chr1_4:29800767-29800786 Msa0159340:CDS 45.0%
ACTATCTTTGACCCAAACCC+AGG - chr1_4:29800803-29800822 Msa0159340:CDS 45.0%
CTATAACTCTCACCTGGGTT+TGG + chr1_4:29800818-29800837 None:intergenic 45.0%
TTCCCACTACAATTCTGACC+GGG - chr1_4:29800909-29800928 Msa0159340:intron 45.0%
CAACGATACACACACCACAT+GGG + chr1_4:29800991-29801010 None:intergenic 45.0%
ACAACGATACACACACCACA+TGG + chr1_4:29800992-29801011 None:intergenic 45.0%
!! TGCTGCTTAAAGGGCATCAT+AGG + chr1_4:29801040-29801059 None:intergenic 45.0%
TTATGATGGCACAGATTGGG+AGG - chr1_4:29801329-29801348 Msa0159340:intron 45.0%
TATGATGGCACAGATTGGGA+GGG - chr1_4:29801330-29801349 Msa0159340:intron 45.0%
TTAAAGCTGGCACTCACCTT+TGG - chr1_4:29801679-29801698 Msa0159340:intron 45.0%
TATGCCTGCAAAGAAAGGCT+TGG + chr1_4:29801720-29801739 None:intergenic 45.0%
CGCTATATGCCTGCAAAGAA+AGG + chr1_4:29801725-29801744 None:intergenic 45.0%
CAGGCAAATGCACTCATTAC+AGG - chr1_4:29802053-29802072 Msa0159340:intron 45.0%
!! GTATTTCTAGGGACACTCTG+GGG - chr1_4:29802179-29802198 Msa0159340:intron 45.0%
! GGAGGTACATTGTGTATGCT+GGG - chr1_4:29802200-29802219 Msa0159340:intron 45.0%
AAAGTTTGGTCACTTGCCTC+TGG - chr1_4:29802267-29802286 Msa0159340:intron 45.0%
CCAAGAGGTTGGAGTAACTT+GGG + chr1_4:29802350-29802369 None:intergenic 45.0%
ACCAAGAGGTTGGAGTAACT+TGG + chr1_4:29802351-29802370 None:intergenic 45.0%
TGATTACGTTGCTTAACCCC+TGG - chr1_4:29802586-29802605 Msa0159340:intron 45.0%
TATGACCATACCAGCTCATG+AGG - chr1_4:29802893-29802912 Msa0159340:intron 45.0%
ATGACCATACCAGCTCATGA+GGG - chr1_4:29802894-29802913 Msa0159340:intron 45.0%
GATATTACACCCTCATGAGC+TGG + chr1_4:29802906-29802925 None:intergenic 45.0%
TGTCACTGGTGATTGTGCTA+GGG + chr1_4:29802931-29802950 None:intergenic 45.0%
TAGCACAATCACCAGTGACA+GGG - chr1_4:29802931-29802950 Msa0159340:intron 45.0%
!! TTTATTATATTATATTATGT+GGG - chr1_4:29795807-29795826 Msa0159340:intron 5.0%
! ACTGGTCTAATTGGATGGCG+TGG - chr1_4:29792369-29792388 Msa0159340:three_prime_UTR 50.0%
GTCGATGCGCGTCAAAATGA+TGG - chr1_4:29792733-29792752 Msa0159340:intron 50.0%
GTCGATGCGCGTCAAAATGA+TGG - chr1_4:29792733-29792752 Msa0159340:intron 50.0%
AAAGTCAACGCCAGGCATGA+CGG - chr1_4:29792883-29792902 Msa0159340:intron 50.0%
TGTGACAGTCTACCGGTCAT+GGG + chr1_4:29792918-29792937 None:intergenic 50.0%
TTGTGACAGTCTACCGGTCA+TGG + chr1_4:29792919-29792938 None:intergenic 50.0%
! CATGGGTTGTGACAGTCTAC+CGG + chr1_4:29792925-29792944 None:intergenic 50.0%
AGACTGTCACAACCCATGAC+CGG - chr1_4:29792927-29792946 Msa0159340:intron 50.0%
CTGGTCTAATGCCAAGAGGA+GGG + chr1_4:29793541-29793560 None:intergenic 50.0%
GAACACAGCATGACCAATCC+TGG + chr1_4:29793560-29793579 None:intergenic 50.0%
! GCATTCACAGCAACTGGTTC+AGG - chr1_4:29793950-29793969 Msa0159340:intron 50.0%
AGGAAAGGGCCTACATCTTC+AGG - chr1_4:29794626-29794645 Msa0159340:intron 50.0%
TTGGCAGCTCCTGAAGATGT+AGG + chr1_4:29794638-29794657 None:intergenic 50.0%
TCAGGAGCTGCCAATAGTAC+TGG - chr1_4:29794644-29794663 Msa0159340:intron 50.0%
!! GCTGCCAATAGTACTGGTAC+AGG - chr1_4:29794650-29794669 Msa0159340:intron 50.0%
!! TCCTGGTGATGGAGTTGCTA+TGG - chr1_4:29794724-29794743 Msa0159340:intron 50.0%
!! TGGTGATGGAGTTGCTATGG+CGG - chr1_4:29794727-29794746 Msa0159340:intron 50.0%
GGCAACTTGCAGAATGTTGC+TGG - chr1_4:29794749-29794768 Msa0159340:intron 50.0%
! TATGGTACTGAAGGAGCAGG+CGG - chr1_4:29794794-29794813 Msa0159340:intron 50.0%
TGCATCTTCCACAAACCAGC+TGG - chr1_4:29794820-29794839 Msa0159340:intron 50.0%
AATCTGTAGCATGCTCGGCA+GGG + chr1_4:29795518-29795537 None:intergenic 50.0%
CTTCTTGTCATGTCCAGCAC+TGG + chr1_4:29795704-29795723 None:intergenic 50.0%
! CAGTGCTGGACATGACAAGA+AGG - chr1_4:29795702-29795721 Msa0159340:intron 50.0%
CCCGATTGGTGCACATGATA+AGG - chr1_4:29796215-29796234 Msa0159340:intron 50.0%
GTTCTGCTATGTAGCAGCAG+AGG - chr1_4:29796532-29796551 Msa0159340:intron 50.0%
AGTTGCCGGGTCAAGATTGA+CGG - chr1_4:29797135-29797154 Msa0159340:intron 50.0%
ACCATCCGTCAATCTTGACC+CGG + chr1_4:29797143-29797162 None:intergenic 50.0%
AAGAACTAGCCAGCTACCTG+TGG + chr1_4:29798461-29798480 None:intergenic 50.0%
CCTGTCTTATGTTGTGGGTG+GGG - chr1_4:29799113-29799132 Msa0159340:intron 50.0%
GTGGAGTGATAAGGAGGTTG+AGG + chr1_4:29799145-29799164 None:intergenic 50.0%
!! TAAGGTTGGTTTGGTGGCTG+GGG + chr1_4:29799183-29799202 None:intergenic 50.0%
GGATGATTAACCAATGCCCC+TGG - chr1_4:29799404-29799423 Msa0159340:intron 50.0%
ATTGGGATTAGGCCCAAACC+AGG + chr1_4:29799570-29799589 None:intergenic 50.0%
GGGGTTGAGTAGGGAACTTA+AGG - chr1_4:29799593-29799612 Msa0159340:intron 50.0%
! TGCTTATGTGGCAGTTGGTG+GGG - chr1_4:29799622-29799641 Msa0159340:intron 50.0%
GGGTAGGCAAATGAGTGTAG+TGG - chr1_4:29799643-29799662 Msa0159340:intron 50.0%
CTCTCTCTGCCCAACCTAAA+AGG + chr1_4:29799712-29799731 None:intergenic 50.0%
!! CTCTCTAAGATCCGGCATGT+TGG + chr1_4:29799858-29799877 None:intergenic 50.0%
!! CACTGGCTCTCTCTAAGATC+CGG + chr1_4:29799866-29799885 None:intergenic 50.0%
AGTGGTGTTCATGAGCATGG+AGG - chr1_4:29800017-29800036 Msa0159340:CDS 50.0%
GTGGTGTTCATGAGCATGGA+GGG - chr1_4:29800018-29800037 Msa0159340:CDS 50.0%
TGGAGGGTCATACCATGCTT+TGG - chr1_4:29800034-29800053 Msa0159340:CDS 50.0%
!! GTTTCAGTCTTGGTGCCAAG+AGG - chr1_4:29800056-29800075 Msa0159340:CDS 50.0%
CCTCAAGTGGTCTAGTGTCT+AGG + chr1_4:29800560-29800579 None:intergenic 50.0%
CCTAGACACTAGACCACTTG+AGG - chr1_4:29800557-29800576 Msa0159340:intron 50.0%
GTTCAACCTCAACTCACAGG+TGG + chr1_4:29800628-29800647 None:intergenic 50.0%
! GGTTTCGCTCTAGACCTTAC+GGG - chr1_4:29800725-29800744 Msa0159340:CDS 50.0%
! GCACATGGGCTATCTCAATG+TGG + chr1_4:29800756-29800775 None:intergenic 50.0%
TCCCACTACAATTCTGACCG+GGG - chr1_4:29800910-29800929 Msa0159340:intron 50.0%
AACAAAGACGATGTGTGCCC+CGG + chr1_4:29800930-29800949 None:intergenic 50.0%
TCGTTGTTCTGCGAACCCTT+TGG - chr1_4:29801005-29801024 Msa0159340:intron 50.0%
GGGAGGAAAGTTCATGGGTT+TGG - chr1_4:29801169-29801188 Msa0159340:intron 50.0%
!! GGTTTTGCTTCAGTGGGCTT+CGG - chr1_4:29801265-29801284 Msa0159340:intron 50.0%
! TTCAGTGGGCTTCGGAGAAA+TGG - chr1_4:29801273-29801292 Msa0159340:intron 50.0%
TGGGCTTCGGAGAAATGGAA+AGG - chr1_4:29801278-29801297 Msa0159340:intron 50.0%
CCAAACCTTACACCACCAAG+TGG + chr1_4:29801438-29801457 None:intergenic 50.0%
!! CCACTTGGTGGTGTAAGGTT+TGG - chr1_4:29801435-29801454 Msa0159340:intron 50.0%
CACAACATTGCCAGATGCTG+CGG + chr1_4:29802010-29802029 None:intergenic 50.0%
! GGGAGGTACATTGTGTATGC+TGG - chr1_4:29802199-29802218 Msa0159340:intron 50.0%
CCCAAGTTACTCCAACCTCT+TGG - chr1_4:29802347-29802366 Msa0159340:intron 50.0%
TCCAACCTCTTGGTTATCGG+AGG - chr1_4:29802357-29802376 Msa0159340:intron 50.0%
TCCTCCGATAACCAAGAGGT+TGG + chr1_4:29802361-29802380 None:intergenic 50.0%
GGTATCCTCCGATAACCAAG+AGG + chr1_4:29802365-29802384 None:intergenic 50.0%
CTTGGTTATCGGAGGATACC+AGG - chr1_4:29802365-29802384 Msa0159340:intron 50.0%
!! TGGTGTTGATCGGACTACCA+GGG + chr1_4:29802606-29802625 None:intergenic 50.0%
GTCATTGGAGCTATGGCACA+TGG - chr1_4:29802857-29802876 Msa0159340:intron 50.0%
TACACCCTCATGAGCTGGTA+TGG + chr1_4:29802901-29802920 None:intergenic 50.0%
CTGTCACTGGTGATTGTGCT+AGG + chr1_4:29802932-29802951 None:intergenic 50.0%
CTAGCACAATCACCAGTGAC+AGG - chr1_4:29802930-29802949 Msa0159340:intron 50.0%
ACAATCACCAGTGACAGGGA+TGG - chr1_4:29802935-29802954 Msa0159340:intron 50.0%
CTACCGGTCATGGGTCATGA+CGG + chr1_4:29792909-29792928 None:intergenic 55.0%
TTAGTGTCCGCGCCACCAAA+TGG - chr1_4:29793435-29793454 Msa0159340:CDS 55.0%
AATGCCAAGAGGAGGGCAGA+CGG + chr1_4:29793534-29793553 None:intergenic 55.0%
CCTGGTCTAATGCCAAGAGG+AGG + chr1_4:29793542-29793561 None:intergenic 55.0%
CCTCCTCTTGGCATTAGACC+AGG - chr1_4:29793539-29793558 Msa0159340:intron 55.0%
GCCATAGCAACTCCATCACC+AGG + chr1_4:29794728-29794747 None:intergenic 55.0%
!! GGTGATGGAGTTGCTATGGC+GGG - chr1_4:29794728-29794747 Msa0159340:intron 55.0%
GAATCTGTAGCATGCTCGGC+AGG + chr1_4:29795519-29795538 None:intergenic 55.0%
CCCCACCCACAACATAAGAC+AGG + chr1_4:29799116-29799135 None:intergenic 55.0%
!! GCTTATGTGGCAGTTGGTGG+GGG - chr1_4:29799623-29799642 Msa0159340:intron 55.0%
TGGGAATGCATCCCTTTGGG+TGG - chr1_4:29799938-29799957 Msa0159340:intron 55.0%
!! GCTCTAGGGATCCACCCAAA+GGG + chr1_4:29799952-29799971 None:intergenic 55.0%
!! AGCTCTAGGGATCCACCCAA+AGG + chr1_4:29799953-29799972 None:intergenic 55.0%
GGTGGATCCCTAGAGCTGAA+AGG - chr1_4:29799956-29799975 Msa0159340:intron 55.0%
AGTCTGCATCGAGGTCCTCT+TGG + chr1_4:29800074-29800093 None:intergenic 55.0%
AAGAGGACCTCGATGCAGAC+TGG - chr1_4:29800073-29800092 Msa0159340:CDS 55.0%
AGAGGACCTCGATGCAGACT+GGG - chr1_4:29800074-29800093 Msa0159340:CDS 55.0%
CAACTACCCAGTCTGCATCG+AGG + chr1_4:29800083-29800102 None:intergenic 55.0%
GGACGCCAAACCACATGTAG+CGG - chr1_4:29800481-29800500 Msa0159340:intron 55.0%
TGAGGCAAGGTTGCCTCAAG+TGG + chr1_4:29800573-29800592 None:intergenic 55.0%
TGGTGCAGGTAGTTGAGGCA+AGG + chr1_4:29800586-29800605 None:intergenic 55.0%
ATGGCTGGTGCAGGTAGTTG+AGG + chr1_4:29800591-29800610 None:intergenic 55.0%
CAACTACCTGCACCAGCCAT+TGG - chr1_4:29800591-29800610 Msa0159340:intron 55.0%
AGTGAACCAATGGCTGGTGC+AGG + chr1_4:29800600-29800619 None:intergenic 55.0%
!! TCAATGTGGGCTAGCCCGTA+AGG + chr1_4:29800742-29800761 None:intergenic 55.0%
GCCCCGGTCAGAATTGTAGT+GGG + chr1_4:29800914-29800933 None:intergenic 55.0%
TGCCCCGGTCAGAATTGTAG+TGG + chr1_4:29800915-29800934 None:intergenic 55.0%
ATGGCACAGATTGGGAGGGT+TGG - chr1_4:29801334-29801353 Msa0159340:intron 55.0%
TGGCACAGATTGGGAGGGTT+GGG - chr1_4:29801335-29801354 Msa0159340:intron 55.0%
ACAGATTGGGAGGGTTGGGT+GGG - chr1_4:29801339-29801358 Msa0159340:intron 55.0%
GCAGCCAAGCCTTTCTTTGC+AGG - chr1_4:29801713-29801732 Msa0159340:intron 55.0%
CAAGCAGGGAGGATCTACAC+AGG - chr1_4:29801951-29801970 Msa0159340:intron 55.0%
AGGGAGGATCTACACAGGTG+AGG - chr1_4:29801956-29801975 Msa0159340:intron 55.0%
CACAGGTGAGGTTTCAGCCA+AGG - chr1_4:29801968-29801987 Msa0159340:intron 55.0%
GTGAGGTTTCAGCCAAGGAG+TGG - chr1_4:29801973-29801992 Msa0159340:intron 55.0%
! TTTCTAGGGACACTCTGGGG+AGG - chr1_4:29802182-29802201 Msa0159340:intron 55.0%
!! GGTGTTGATCGGACTACCAG+GGG + chr1_4:29802605-29802624 None:intergenic 55.0%
!! CTGGTGTTGATCGGACTACC+AGG + chr1_4:29802607-29802626 None:intergenic 55.0%
GAAGCAACCATCCCTGTCAC+TGG + chr1_4:29802945-29802964 None:intergenic 55.0%
GGTGACAGTCTGCCGGTCAT+GGG + chr1_4:29792942-29792961 None:intergenic 60.0%
!! GTAGGGACCATTTGGTGGCG+CGG + chr1_4:29793445-29793464 None:intergenic 60.0%
ATGCCAAGAGGAGGGCAGAC+GGG + chr1_4:29793533-29793552 None:intergenic 60.0%
TGCTCCTGTTACGGCCCGAT+TGG - chr1_4:29796201-29796220 Msa0159340:intron 60.0%
TGCACCAATCGGGCCGTAAC+AGG + chr1_4:29796208-29796227 None:intergenic 60.0%
GCCGGGTCAAGATTGACGGA+TGG - chr1_4:29797139-29797158 Msa0159340:intron 60.0%
GAAAACGCAGAGCACGCCAG+AGG - chr1_4:29798812-29798831 Msa0159340:intron 60.0%
GGGGTGGGAGAGTTAAGGAG+TGG + chr1_4:29799164-29799183 None:intergenic 60.0%
TGGCTGGGGTGGGAGAGTTA+AGG + chr1_4:29799169-29799188 None:intergenic 60.0%
!! GTTGGTTTGGTGGCTGGGGT+GGG + chr1_4:29799179-29799198 None:intergenic 60.0%
!! AAAGAGTGCCCCAGGGGCAT+TGG + chr1_4:29799417-29799436 None:intergenic 60.0%
!! ATGTGGCAGTTGGTGGGGGT+AGG - chr1_4:29799627-29799646 Msa0159340:intron 60.0%
CACCACATGGGCTTGCAGCA+GGG + chr1_4:29800979-29800998 None:intergenic 60.0%
ACACCACATGGGCTTGCAGC+AGG + chr1_4:29800980-29800999 None:intergenic 60.0%
CACAGATTGGGAGGGTTGGG+TGG - chr1_4:29801338-29801357 Msa0159340:intron 60.0%
CAGATTGGGAGGGTTGGGTG+GGG - chr1_4:29801340-29801359 Msa0159340:intron 60.0%
GGGTTGGGTGGGGTTACATG+TGG - chr1_4:29801350-29801369 Msa0159340:intron 60.0%
GCCAAGGAGTGGACACCTTC+TGG - chr1_4:29801984-29802003 Msa0159340:intron 60.0%
!! GCCAGAAGGTGTCCACTCCT+TGG + chr1_4:29801988-29802007 None:intergenic 60.0%
!! GGCAGGGGACTGGTGTTGAT+CGG + chr1_4:29802616-29802635 None:intergenic 60.0%
AGCAGTCATTGGCAGGGGAC+TGG + chr1_4:29802626-29802645 None:intergenic 60.0%
GTCATGACGGCCGTCATGCC+TGG + chr1_4:29792896-29792915 None:intergenic 65.0%
CGGCCGTCATGACCCATGAC+CGG - chr1_4:29792903-29792922 Msa0159340:intron 65.0%
GGGTGACAGTCTGCCGGTCA+TGG + chr1_4:29792943-29792962 None:intergenic 65.0%
!! GGTTGGTTTGGTGGCTGGGG+TGG + chr1_4:29799180-29799199 None:intergenic 65.0%
GTCCCTGCTGCAAGCCCATG+TGG - chr1_4:29800974-29800993 Msa0159340:intron 65.0%
CACCTTCTGGCCGCAGCATC+TGG - chr1_4:29801997-29802016 Msa0159340:intron 65.0%
TGCCAGATGCTGCGGCCAGA+AGG + chr1_4:29802002-29802021 None:intergenic 65.0%
CCAAGAGGAGGGCAGACGGG+TGG + chr1_4:29793530-29793549 None:intergenic 70.0%
CCACCCGTCTGCCCTCCTCT+TGG - chr1_4:29793527-29793546 Msa0159340:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 29792302 29803203 29792302 ID=Msa0159340;Name=Msa0159340
chr1_4 mRNA 29792302 29803203 29792302 ID=Msa0159340-mRNA-1;Parent=Msa0159340;Name=Msa0159340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.75|0.66|0.88|0.75|0.88|9|202|416
chr1_4 exon 29792302 29792647 29792302 ID=Msa0159340-mRNA-1:exon:9625;Parent=Msa0159340-mRNA-1
chr1_4 exon 29793119 29793316 29793119 ID=Msa0159340-mRNA-1:exon:9624;Parent=Msa0159340-mRNA-1
chr1_4 exon 29793431 29793547 29793431 ID=Msa0159340-mRNA-1:exon:9623;Parent=Msa0159340-mRNA-1
chr1_4 exon 29793633 29793788 29793633 ID=Msa0159340-mRNA-1:exon:9622;Parent=Msa0159340-mRNA-1
chr1_4 exon 29796570 29796719 29796570 ID=Msa0159340-mRNA-1:exon:9621;Parent=Msa0159340-mRNA-1
chr1_4 exon 29799782 29799891 29799782 ID=Msa0159340-mRNA-1:exon:9620;Parent=Msa0159340-mRNA-1
chr1_4 exon 29799959 29800100 29799959 ID=Msa0159340-mRNA-1:exon:9619;Parent=Msa0159340-mRNA-1
chr1_4 exon 29800664 29800891 29800664 ID=Msa0159340-mRNA-1:exon:9618;Parent=Msa0159340-mRNA-1
chr1_4 exon 29803198 29803203 29803198 ID=Msa0159340-mRNA-1:exon:9617;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29803198 29803203 29803198 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29800664 29800891 29800664 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29799959 29800100 29799959 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29799782 29799891 29799782 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29796570 29796719 29796570 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29793633 29793788 29793633 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29793431 29793547 29793431 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29793119 29793316 29793119 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 CDS 29792504 29792647 29792504 ID=Msa0159340-mRNA-1:cds;Parent=Msa0159340-mRNA-1
chr1_4 three_prime_UTR 29792302 29792503 29792302 ID=Msa0159340-mRNA-1:three_prime_utr;Parent=Msa0159340-mRNA-1
Gene Sequence

>Msa0159340

ATGGCTAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTTGGCCCTTCTAATTCTCAACCGTCAACTCCATCTATTCATACTCCTGGTGATGGAGTTGCTATGGCGGGCAACTTGCAGAATGTTGCTGGTGTATCCAAGGGTTTGATGATTTATGGTACTGAAGGAGCAGGCGGTCTTGCATCTTCCACAAACCAGCTGGATGGCTTGGAACATTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGATGGTGATGGAAAGGACTTATTTGGGACGTTGAAACGGAACCCTGCCGAGCATGCTACAGATTCTTCAAAAGGCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCCAGTGCTGGACATGACAAGAAGGTTGTTCTTTGGAACATGGAGACACTGAAAACGCAGAGCACGCCAGAGGAACACACTGTTATTATTACTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCGTTTGATACAACTGTGCGGCTTTGGGATGCTGCTGATCCAAGCCTTTCTTTGCAGGCATATAGCGGTCATACTTCACATGTTGCATCCCTTGATTTCCACCCTAAGAAAAATGACCTTTTCTGTTCCTGTGATGATAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGTACTCGTGTTTTTAAGGGAGGATCTACACAGGTGAGGTTTCAGCCAAGGAGTGGACACCTTCTGGCCGCAGCATCTGGCAATGTTGTGTCTCTCTTTGATGTTGAGACTGACAGGCAAATGCACTCATTACAGGGACACTCTGGGGAGGTACATTGTGTATGCTGGGATACAAATGGAGATTATTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTTTGGTCACTTGCCTCTGGTGATTGCATTCATGAACTTAATTCCAGTGGAAACATGTTTCATTCTTGTGTTTTTCACCCAAGTTACTCCAACCTCTTGGTTATCGGAGGATACCAGTCATTGGAGCTATGGCACATGGCCGAAAACAAATGTATGACCATACCAGCTCATGAGGGTGTAATATCAGCCCTAGCACAATCACCAGTGACAGGGATGGTTGCTTCTGCCAGTCATGACAAGTCAGTAAAGATATGGAAATAA
Protein sequence

>Msa0159340

MANNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSIHTPGDGVAMAGNLQNVAGVSKGLMIYGTEGAGGLASSTNQLDGLEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIITDVRFRPNSTQLATSSFDTTVRLWDAADPSLSLQAYSGHTSHVASLDFHPKKNDLFCSCDDNNEIRFWNISQYSCTRVFKGGSTQVRFQPRSGHLLAAASGNVVSLFDVETDRQMHSLQGHSGEVHCVCWDTNGDYLASVSQESVKVWSLASGDCIHELNSSGNMFHSCVFHPSYSNLLVIGGYQSLELWHMAENKCMTIPAHEGVISALAQSPVTGMVASASHDKSVKIWK*