AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1274560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1274560 MtrunA17_Chr8g0340751 98.542 686 10 0 1 686 1 686 0.0 1412
Msa1274560 MtrunA17_Chr3g0140561 77.137 503 112 1 8 510 9 508 0.0 834
Msa1274560 MtrunA17_Chr6g0483461 65.347 505 172 2 17 521 7 508 0.0 723
Msa1274560 MtrunA17_Chr8g0392531 65.440 489 168 1 24 512 15 502 0.0 709
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1274560 AT4G32850.9 64.669 634 191 9 1 617 2 619 0.0 817
Msa1274560 AT4G32850.5 64.669 634 191 9 1 617 2 619 0.0 817
Msa1274560 AT4G32850.6 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.2 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.1 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.13 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.15 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.16 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.4 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.17 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.14 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.12 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.11 64.669 634 191 9 1 617 2 619 0.0 816
Msa1274560 AT4G32850.3 64.669 634 191 9 1 617 2 619 0.0 815
Msa1274560 AT4G32850.8 64.669 634 191 9 1 617 2 619 0.0 815
Msa1274560 AT4G32850.10 64.669 634 191 9 1 617 2 619 0.0 815
Msa1274560 AT4G32850.7 64.669 634 191 9 1 617 2 619 0.0 815
Msa1274560 AT2G25850.4 71.589 535 145 2 10 544 12 539 0.0 811
Msa1274560 AT2G25850.1 71.589 535 145 2 10 544 12 539 0.0 811
Msa1274560 AT2G25850.3 71.589 535 145 2 10 544 12 539 0.0 810
Msa1274560 AT2G25850.2 71.589 535 145 2 10 544 12 539 0.0 810
Msa1274560 AT2G25850.6 71.589 535 145 2 10 544 12 539 0.0 809
Msa1274560 AT2G25850.7 71.589 535 145 2 10 544 12 539 0.0 809
Msa1274560 AT2G25850.8 71.589 535 145 2 10 544 12 539 0.0 809
Msa1274560 AT2G25850.5 71.589 535 145 2 10 544 12 539 0.0 809
Msa1274560 AT2G25850.9 71.589 535 145 2 10 544 12 539 0.0 808
Msa1274560 AT1G17980.1 64.008 489 174 2 24 512 9 495 0.0 686
Msa1274560 AT1G17980.2 65.405 370 126 2 143 512 1 368 0.0 536
Msa1274560 AT3G06560.1 36.484 455 269 4 41 495 14 448 8.89e-89 287

Find 249 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGAAAATTGAATGAAATT+TGG 0.102597 8_3:+8324018 None:intergenic
CACTCCGGTGCTTGAAGTTT+TGG 0.160064 8_3:-8321810 Msa1274560:CDS
TTTGATCAGTGTACCCTTTC+AGG 0.188798 8_3:+8323107 None:intergenic
GTTTCCTCGGTGGTGTTAAC+TGG 0.190201 8_3:-8321651 Msa1274560:CDS
CTTCAAGAAAATGAGGTTTC+TGG 0.193646 8_3:-8320833 Msa1274560:CDS
CCTTTAGTTTCATCCATTCT+AGG 0.195179 8_3:-8324078 Msa1274560:five_prime_UTR
GAAAATGTCACCTCAATATT+TGG 0.204775 8_3:+8321943 None:intergenic
ACTTGCCTTATTACTGTCTT+TGG 0.211695 8_3:+8320056 None:intergenic
AGAAATTCAACAGTTGAATT+TGG 0.211973 8_3:-8319921 Msa1274560:three_prime_UTR
AACCCTAGATCCCTAAAATT+AGG 0.220090 8_3:+8324151 None:intergenic
ATTAGTGGGCATACATTAAA+AGG 0.249293 8_3:-8319669 Msa1274560:three_prime_UTR
TGCTTGTCTCTCGATTCTTT+AGG 0.249867 8_3:-8321576 Msa1274560:CDS
TCGCAGTTTCTCGTTGATTC+GGG 0.252450 8_3:-8323649 Msa1274560:intron
ACAGACACATTTGGAGGTTT+TGG 0.259056 8_3:-8320366 Msa1274560:CDS
GCTTGTCTCTCGATTCTTTA+GGG 0.259935 8_3:-8321575 Msa1274560:CDS
AGCCGGGGCATGACTTTCTT+TGG 0.271467 8_3:-8319764 Msa1274560:three_prime_UTR
TCAAACTTGAACTTCATAAC+TGG 0.280123 8_3:+8322542 None:intergenic
CCACATTCAGTCCCAGCTTC+TGG 0.281497 8_3:+8320602 None:intergenic
GCATAATCTTATATTGATAT+TGG 0.289228 8_3:-8319433 Msa1274560:three_prime_UTR
GGAATAAACACCTCGTCTTT+TGG 0.294343 8_3:+8321786 None:intergenic
CGACTTCATTAGTATTTGTT+AGG 0.296573 8_3:-8319704 Msa1274560:three_prime_UTR
GTTATGAAGTTCAAGTTTGA+TGG 0.296593 8_3:-8322539 Msa1274560:CDS
GAGAAAAGAAACAGGTAAAT+TGG 0.297266 8_3:+8320164 None:intergenic
TCGAAAATTGAATGAAATTT+GGG 0.305067 8_3:+8324019 None:intergenic
CTATTAATATGTACATGTTC+TGG 0.305540 8_3:-8320985 Msa1274560:CDS
GCGTGTGTGTAAAGTGTTTA+GGG 0.314475 8_3:+8324276 None:intergenic
GCCTGAAAATATTAGCAAAA+TGG 0.316731 8_3:+8319848 None:intergenic
TGATACAGACGCAACATATT+CGG 0.321661 8_3:+8320532 None:intergenic
TATCTCTTCTGTCATCATAA+AGG 0.328577 8_3:-8320283 Msa1274560:exon
AGCATGCTTGGAACTGCATT+TGG 0.335457 8_3:+8321595 None:intergenic
CATGGGCTTGCAGAGGAAAC+AGG 0.348638 8_3:-8321071 Msa1274560:CDS
TTCACATAGTGCTTTCTTCA+TGG 0.349773 8_3:-8321089 Msa1274560:CDS
GAACATAACATGACAGGATT+TGG 0.350763 8_3:+8321532 None:intergenic
GTCGCAGTTTCTCGTTGATT+CGG 0.352160 8_3:-8323650 Msa1274560:intron
TACTGAACTGCAACCAGTTC+CGG 0.353640 8_3:-8322576 Msa1274560:CDS
AATGCTGTCATTCTCACATT+TGG 0.357290 8_3:-8323070 Msa1274560:CDS
CCCTAAAATTAGGGATGAAA+AGG 0.366049 8_3:+8324161 None:intergenic
ACTTGGATACACTGTGTATT+GGG 0.372655 8_3:-8322756 Msa1274560:CDS
ATGATTGAGCGTGATACTAT+TGG 0.372879 8_3:-8321166 Msa1274560:CDS
ACCCTAGATCCCTAAAATTA+GGG 0.377656 8_3:+8324152 None:intergenic
CAACTCATCTTGCTCACTAT+TGG 0.378921 8_3:+8320640 None:intergenic
TTCAAGAAAATGAGGTTTCT+GGG 0.381778 8_3:-8320832 Msa1274560:CDS
ACATTTGGTTCTTATCGTCT+TGG 0.383734 8_3:-8323055 Msa1274560:CDS
ACTGGTACTGTTGACCTTGA+TGG 0.384249 8_3:+8320875 None:intergenic
GCGGAACTGTTGAAGCATTT+CGG 0.386649 8_3:-8321012 Msa1274560:CDS
TTCTTCTTCGCAGGCTGTGC+CGG 0.391203 8_3:-8323839 Msa1274560:CDS
ATGTTTCACACATCCGTAGA+AGG 0.392928 8_3:-8320943 Msa1274560:CDS
AGCGTGTGTGTAAAGTGTTT+AGG 0.396684 8_3:+8324275 None:intergenic
GATTCTGTAAAACTTGGAAT+TGG 0.396836 8_3:-8320431 Msa1274560:CDS
TTTCTGGGACTGAACTTTGT+GGG 0.397193 8_3:-8320817 Msa1274560:CDS
AACATCCCTGCCATTGCAAT+TGG 0.400322 8_3:+8320119 None:intergenic
TCAATATACTCCCGAGGATA+AGG 0.409571 8_3:+8321127 None:intergenic
TAGCCTTCAAAGAAAACATA+TGG 0.413064 8_3:+8321286 None:intergenic
TTTGGTTGTGTTTGAGATCA+TGG 0.414940 8_3:-8323902 Msa1274560:exon
GAGATAGGGAAAGGAGGGTA+GGG 0.415286 8_3:-8319595 Msa1274560:three_prime_UTR
AGGGATCTGAAGAGGGAAAA+GGG 0.416146 8_3:+8324181 None:intergenic
AGACACATTACAGACACATT+TGG 0.419118 8_3:-8320375 Msa1274560:CDS
ATCTCTTCTGTCATCATAAA+GGG 0.419886 8_3:-8320282 Msa1274560:exon
ATGATGGAGCAGTTCCAATA+TGG 0.422932 8_3:-8321367 Msa1274560:CDS
GATACAGACGCAACATATTC+GGG 0.423361 8_3:+8320533 None:intergenic
CTGTTCCAAAGACAGTAATA+AGG 0.427753 8_3:-8320061 Msa1274560:intron
ATTGAAATCGAAATTGAAAT+CGG 0.430592 8_3:+8324127 None:intergenic
AGAAGAATGTCTCCAGAAGC+TGG 0.432381 8_3:-8320614 Msa1274560:CDS
TGAGATAGGGAAAGGAGGGT+AGG 0.433017 8_3:-8319596 Msa1274560:three_prime_UTR
CTACACGTTCCATGATATCC+TGG 0.433059 8_3:-8322615 Msa1274560:CDS
CTTTAGTTTCATCCATTCTA+GGG 0.435568 8_3:-8324077 Msa1274560:five_prime_UTR
AGATAGGGAAAGGAGGGTAG+GGG 0.436042 8_3:-8319594 Msa1274560:three_prime_UTR
AACCAAGCTTGCATCACCTA+TGG 0.437658 8_3:-8319811 Msa1274560:three_prime_UTR
TCACATAGTGCTTTCTTCAT+GGG 0.438419 8_3:-8321088 Msa1274560:CDS
GTTTCTGGGACTGAACTTTG+TGG 0.441877 8_3:-8320818 Msa1274560:CDS
TAGGAAAAGGACTCAACAAT+TGG 0.442789 8_3:-8323761 Msa1274560:CDS
ATGTACATGTTCTGGAAACC+TGG 0.445475 8_3:-8320977 Msa1274560:CDS
GTAAGTTCTAATTTAACTGC+TGG 0.446455 8_3:-8319874 Msa1274560:three_prime_UTR
ATTGAAGAAAGCCAGCCATT+TGG 0.447812 8_3:-8319896 Msa1274560:three_prime_UTR
GTGACACCATATTGTTTCTC+CGG 0.448464 8_3:+8323820 None:intergenic
AAGGGATCTGAAGAGGGAAA+AGG 0.448522 8_3:+8324180 None:intergenic
TCGATAGAGGAGAACGAGCT+TGG 0.449291 8_3:-8321511 Msa1274560:CDS
AGGATTCTTGCTGAAATTAG+TGG 0.451873 8_3:-8319684 Msa1274560:three_prime_UTR
TGTACCCTTTCAGGCGAGTA+AGG 0.452086 8_3:+8323116 None:intergenic
CTAGAATGGATGAAACTAAA+GGG 0.452634 8_3:+8324079 None:intergenic
CCATGCTAGCCAGGATATCA+TGG 0.453705 8_3:+8322606 None:intergenic
AGATTGAGATAGGGAAAGGA+GGG 0.455915 8_3:-8319600 Msa1274560:three_prime_UTR
AAAGCTTGTTCCAAATATTG+AGG 0.456049 8_3:-8321953 Msa1274560:intron
CCCCATAGGTGATGCAAGCT+TGG 0.457018 8_3:+8319809 None:intergenic
GATAGGGAAAGGAGGGTAGG+GGG 0.458286 8_3:-8319593 Msa1274560:three_prime_UTR
TGAAACTAAAGGGAAAAGAT+TGG 0.458359 8_3:+8324089 None:intergenic
GGGACATGAGCGTCCGGAAC+TGG 0.458888 8_3:+8322563 None:intergenic
AGCAAGGGATTTGCCTTCTA+CGG 0.460601 8_3:+8320930 None:intergenic
ATGATGCAGGTTCATGGACC+TGG 0.461164 8_3:-8322784 Msa1274560:intron
ACTTGCGTGCTTGGAAAGGT+TGG 0.464315 8_3:-8321219 Msa1274560:CDS
CATCACCTATGGGGACTGAT+TGG 0.465098 8_3:-8319800 Msa1274560:three_prime_UTR
TGAAGAGGGAAAAGGGAAGG+AGG 0.468575 8_3:+8324188 None:intergenic
ATTAGAACTTACCAAATGGC+TGG 0.468935 8_3:+8319885 None:intergenic
CAAGCTCTCCGCAGAAGGAT+TGG 0.469809 8_3:+8320727 None:intergenic
GGTTCTTCATAGACTTGGAC+AGG 0.469912 8_3:-8323587 Msa1274560:intron
GAGATTGAGATAGGGAAAGG+AGG 0.469981 8_3:-8319601 Msa1274560:three_prime_UTR
CGAGATCGTTTAAAACCATC+AGG 0.472023 8_3:+8320899 None:intergenic
TCTGCGGAGAGCTTGACAAC+TGG 0.472596 8_3:-8320719 Msa1274560:CDS
AAGAAATACTTGCATAAAGA+AGG 0.475316 8_3:+8322504 None:intergenic
AATCGAGAGACAAGCATGCT+TGG 0.475633 8_3:+8321583 None:intergenic
CCTTGCTATGTGTTTCCTGA+TGG 0.475963 8_3:-8320914 Msa1274560:CDS
CGATAGAGGAGAACGAGCTT+GGG 0.477344 8_3:-8321510 Msa1274560:CDS
ACATCTGTTTCGAGCGAAGA+TGG 0.478731 8_3:-8320560 Msa1274560:CDS
TCATGGACCTGGAGCCGACT+TGG 0.481522 8_3:-8322773 Msa1274560:CDS
ATGTTGATGACTTGCGTGCT+TGG 0.481858 8_3:-8321228 Msa1274560:CDS
CCTACTGTTCGAAGTTTGAA+TGG 0.482112 8_3:-8322000 Msa1274560:CDS
CCTAGAATGGATGAAACTAA+AGG 0.483216 8_3:+8324078 None:intergenic
GTTGCGTCTGTATCAGTGGC+AGG 0.487411 8_3:-8320524 Msa1274560:CDS
CATGGGTAGTTCTGAAGGGT+TGG 0.488691 8_3:-8323884 Msa1274560:CDS
CACATTACAGACACATTTGG+AGG 0.488737 8_3:-8320372 Msa1274560:CDS
GTTCATTGCCTCAACAGCCC+TGG 0.490178 8_3:+8320484 None:intergenic
GGATATGCGGGAGTTATGAT+TGG 0.490365 8_3:+8321436 None:intergenic
TGGCATTAATCTGAAGAGCC+GGG 0.490550 8_3:-8319780 Msa1274560:three_prime_UTR
TTAAATTAGAACTTACCAAA+TGG 0.490653 8_3:+8319881 None:intergenic
GAACTGCATTTGGATACAAC+TGG 0.490788 8_3:+8321605 None:intergenic
AAAATCACTTCAAGAAAATG+AGG 0.491888 8_3:-8320840 Msa1274560:CDS
GAGATCATGGGTAGTTCTGA+AGG 0.493479 8_3:-8323889 Msa1274560:exon
TTAGAGATTGAGATAGGGAA+AGG 0.495416 8_3:-8319604 Msa1274560:three_prime_UTR
GTTGGGTGGAATCACGCCTT+CGG 0.495487 8_3:-8321201 Msa1274560:CDS
TGATTGAGCGTGATACTATT+GGG 0.496467 8_3:-8321165 Msa1274560:CDS
ACAAAGGCTATTTCAATGGC+TGG 0.496666 8_3:-8323799 Msa1274560:CDS
GAAAAGATTGGAATTTAATG+AGG 0.496957 8_3:+8324101 None:intergenic
GACTTGGATACACTGTGTAT+TGG 0.497565 8_3:-8322757 Msa1274560:CDS
CAACAAGTGCTGATAGGAAA+AGG 0.498172 8_3:-8323774 Msa1274560:CDS
GTTAAGCCAATTGCAATGGC+AGG 0.498740 8_3:-8320125 Msa1274560:three_prime_UTR
TGCAGTGCCATCCTTATCCT+CGG 0.502280 8_3:-8321138 Msa1274560:CDS
GAAAGGGTACACTGATCAAA+TGG 0.503748 8_3:-8323104 Msa1274560:CDS
ATGGGTAGTTCTGAAGGGTT+GGG 0.503889 8_3:-8323883 Msa1274560:CDS
ACCAAGCTTGCATCACCTAT+GGG 0.505653 8_3:-8319810 Msa1274560:three_prime_UTR
CCTAAAATTAGGGATGAAAA+GGG 0.505688 8_3:+8324162 None:intergenic
GAATTCATGCACGGATATGC+GGG 0.506238 8_3:+8321424 None:intergenic
ATGGCAGATTCTGTAAAACT+TGG 0.506523 8_3:-8320437 Msa1274560:CDS
TTTGTGGGAGGAACATTAAG+AGG 0.507624 8_3:-8320802 Msa1274560:CDS
CTTGCGTGCTTGGAAAGGTT+GGG 0.508065 8_3:-8321218 Msa1274560:CDS
TAGGTGATGCAAGCTTGGTT+TGG 0.509439 8_3:+8319814 None:intergenic
GCCTGCGAATTCTTCTTCGC+AGG 0.511287 8_3:-8323848 Msa1274560:CDS
TTGAACTGAATAAAGTCGGC+TGG 0.512283 8_3:-8321324 Msa1274560:CDS
CAATAGTGAGCAAGATGAGT+TGG 0.512351 8_3:-8320639 Msa1274560:CDS
GACTAGGTTGAGATCATCAT+AGG 0.512652 8_3:+8319493 None:intergenic
CAAGGAGGAGGCTGACAAGA+GGG 0.515906 8_3:-8323614 Msa1274560:CDS
TTTCCTCGGTGGTGTTAACT+GGG 0.520090 8_3:-8321650 Msa1274560:CDS
TTGGCATTAATCTGAAGAGC+CGG 0.520594 8_3:-8319781 Msa1274560:three_prime_UTR
GGATTCTTGCTGAAATTAGT+GGG 0.522529 8_3:-8319683 Msa1274560:three_prime_UTR
AGTGTATCCAAGTCGGCTCC+AGG 0.523522 8_3:+8322766 None:intergenic
CCAGAAGCTGGGACTGAATG+TGG 0.524060 8_3:-8320602 Msa1274560:CDS
TGCAATTGGCTTAACAGCAC+CGG 0.524387 8_3:+8320133 None:intergenic
TCTTTGGTCTTCTGTACAGT+TGG 0.525261 8_3:-8319748 Msa1274560:three_prime_UTR
TAACTTCATCCATGCTAGCC+AGG 0.528539 8_3:+8322597 None:intergenic
GCTGTGCCGGAGAAACAATA+TGG 0.528556 8_3:-8323826 Msa1274560:CDS
CTGGTCCAACAAGTGCTGAT+AGG 0.529558 8_3:-8323780 Msa1274560:CDS
TGTCATGTTATGTTCGATAG+AGG 0.529833 8_3:-8321524 Msa1274560:CDS
ATCTGAAGAGGGAAAAGGGA+AGG 0.532048 8_3:+8324185 None:intergenic
TTTCAGGTGACAGGTTTCCT+CGG 0.534958 8_3:-8321664 Msa1274560:intron
GGAGGCTGACAAGAGGGAAG+AGG 0.536319 8_3:-8323608 Msa1274560:CDS
GGTATGTTGATGATAGCGCC+AGG 0.545180 8_3:-8320502 Msa1274560:CDS
AGCACCTTACTCGCCTGAAA+GGG 0.545909 8_3:-8323120 Msa1274560:CDS
GTTGTCAAGCTCTCCGCAGA+AGG 0.546497 8_3:+8320722 None:intergenic
CTTTCTTCATGGGCTTGCAG+AGG 0.547388 8_3:-8321078 Msa1274560:CDS
ATGGGCTTGCAGAGGAAACA+GGG 0.548263 8_3:-8321070 Msa1274560:CDS
AGTGATTGTTGTACTTTCCG+AGG 0.550619 8_3:-8319532 Msa1274560:three_prime_UTR
GATGAAAAGGGATCTGAAGA+GGG 0.550718 8_3:+8324174 None:intergenic
GACCAAAGAAAGTCATGCCC+CGG 0.552560 8_3:+8319762 None:intergenic
GAAGAGGTTCTTCATAGACT+TGG 0.553602 8_3:-8323592 Msa1274560:CDS
TGGCCCAAAACTTCAAGCAC+CGG 0.554969 8_3:+8321806 None:intergenic
TGAATTCATGCACGGATATG+CGG 0.554989 8_3:+8321423 None:intergenic
TTGGTTGTGTTTGAGATCAT+GGG 0.557332 8_3:-8323901 Msa1274560:exon
CAAACTTGAACTTCATAACT+GGG 0.558075 8_3:+8322543 None:intergenic
ATAACTGGGACATGAGCGTC+CGG 0.561685 8_3:+8322557 None:intergenic
AGAGGAAGTATGATGACAAG+GGG 0.561998 8_3:-8320784 Msa1274560:CDS
GCATAAGATGAGATCGATCA+CGG 0.563138 8_3:+8321458 None:intergenic
TGATAGCGCCAGGGCTGTTG+AGG 0.563411 8_3:-8320492 Msa1274560:CDS
CGATCACGGGGATTTCTAAG+AGG 0.564126 8_3:+8321472 None:intergenic
AAGGACTCAACAATTGGAGA+AGG 0.567105 8_3:-8323755 Msa1274560:intron
CCATCAGGAAACACATAGCA+AGG 0.567135 8_3:+8320914 None:intergenic
TGTCACAAAGGCTATTTCAA+TGG 0.568611 8_3:-8323803 Msa1274560:CDS
CGCAGTTTCTCGTTGATTCG+GGG 0.570231 8_3:-8323648 Msa1274560:intron
CCATTCAAACTTCGAACAGT+AGG 0.570343 8_3:+8322000 None:intergenic
ACCTCGCGGTTCACATAGGA+TGG 0.570534 8_3:+8322733 None:intergenic
GTTGTATGAGAGCAAGGAGG+AGG 0.571433 8_3:-8323626 Msa1274560:CDS
CATAAGATGAGATCGATCAC+GGG 0.572964 8_3:+8321459 None:intergenic
AATGTGGATCGAATTCTAGC+GGG 0.573214 8_3:-8320586 Msa1274560:CDS
GATGACTTGCGTGCTTGGAA+AGG 0.573339 8_3:-8321223 Msa1274560:CDS
TGCTGTTAAGCCAATTGCAA+TGG 0.574179 8_3:-8320129 Msa1274560:three_prime_UTR
AGATCATGGGTAGTTCTGAA+GGG 0.574684 8_3:-8323888 Msa1274560:exon
GCAGTGCCATCCTTATCCTC+GGG 0.576279 8_3:-8321137 Msa1274560:CDS
TTCGGGGTTGTATGAGAGCA+AGG 0.576974 8_3:-8323632 Msa1274560:CDS
AAGCACCTTACTCGCCTGAA+AGG 0.577425 8_3:-8323121 Msa1274560:CDS
GATATTGAACTGAATAAAGT+CGG 0.578205 8_3:-8321328 Msa1274560:CDS
CTGGGACTGAACTTTGTGGG+AGG 0.578268 8_3:-8320814 Msa1274560:CDS
GCAAGGAGGAGGCTGACAAG+AGG 0.581154 8_3:-8323615 Msa1274560:CDS
AAGCACACTTCGAGTTATGA+TGG 0.583805 8_3:-8321383 Msa1274560:CDS
TCTATCGAACATAACATGAC+AGG 0.588638 8_3:+8321526 None:intergenic
GAAGAATGTCTCCAGAAGCT+GGG 0.589240 8_3:-8320613 Msa1274560:CDS
CAGGTGACAGGTTTCCTCGG+TGG 0.589464 8_3:-8321661 Msa1274560:CDS
TTATAACTTGAATTCATGCA+CGG 0.589909 8_3:+8321415 None:intergenic
TTAAACGATCTCGACCATCA+AGG 0.590903 8_3:-8320889 Msa1274560:CDS
GGATGAAAAGGGATCTGAAG+AGG 0.591744 8_3:+8324173 None:intergenic
TTCCGCGTATATCAAACTGC+TGG 0.593316 8_3:+8321029 None:intergenic
CCATGATATCCTGGCTAGCA+TGG 0.600256 8_3:-8322606 Msa1274560:CDS
GGGTGTATACACAGTGGCGG+TGG 0.601410 8_3:-8321555 Msa1274560:CDS
GATGTTTCTTGATTCTACGA+AGG 0.602847 8_3:-8320102 Msa1274560:three_prime_UTR
TACAGAATCTGCCATGTAGG+TGG 0.604826 8_3:+8320445 None:intergenic
ATATGTTGCGTCTGTATCAG+TGG 0.605141 8_3:-8320528 Msa1274560:CDS
GAAACATGAATGTCCATCCC+AGG 0.613217 8_3:+8320959 None:intergenic
TAAGAGGAAGTATGATGACA+AGG 0.614826 8_3:-8320786 Msa1274560:CDS
GCCTGCGAAGAAGAATTCGC+AGG 0.615191 8_3:+8323847 None:intergenic
CAGAAGAGATACATCGAAGT+CGG 0.619164 8_3:+8320295 None:intergenic
AAAACTTGGAATTGGTACAC+TGG 0.619626 8_3:-8320423 Msa1274560:CDS
TAGATTCGATACCACCTACA+TGG 0.620130 8_3:-8320456 Msa1274560:CDS
GAAGAGGGAAAAGGGAAGGA+GGG 0.624868 8_3:+8324189 None:intergenic
GGGAGTATATTGATGATACA+AGG 0.626920 8_3:-8321117 Msa1274560:CDS
TTGCGTCTGTATCAGTGGCA+GGG 0.626979 8_3:-8320523 Msa1274560:CDS
TCATCAAAGTCAGCTGCCGA+AGG 0.629657 8_3:+8321185 None:intergenic
ATCAAGGTCAACAGTACCAG+TGG 0.629940 8_3:-8320873 Msa1274560:CDS
TTAAGCCAATTGCAATGGCA+GGG 0.633113 8_3:-8320124 Msa1274560:three_prime_UTR
TAATGCCAATCAGTCCCCAT+AGG 0.633586 8_3:+8319795 None:intergenic
TAAAGGGACACTAGTGCATG+TGG 0.636614 8_3:-8320266 Msa1274560:three_prime_UTR
AAGAGGAAGTATGATGACAA+GGG 0.640349 8_3:-8320785 Msa1274560:CDS
GGCATTAATCTGAAGAGCCG+GGG 0.640933 8_3:-8319779 Msa1274560:three_prime_UTR
GTTGAGTTCATATATAACCT+CGG 0.643258 8_3:+8319515 None:intergenic
ATCTACCTCGCGGTTCACAT+AGG 0.647272 8_3:+8322729 None:intergenic
AACAAACAAAAGCACGATCG+TGG 0.647919 8_3:+8324212 None:intergenic
GAAACAATATGGTGTCACAA+AGG 0.649957 8_3:-8323815 Msa1274560:CDS
AGTACTTTCGAACAACACTC+CGG 0.650401 8_3:-8321825 Msa1274560:CDS
GAATGTGGATCGAATTCTAG+CGG 0.652905 8_3:-8320587 Msa1274560:CDS
AGAAATGTACACAAAAGACT+AGG 0.655502 8_3:+8319477 None:intergenic
CATGTTCTGGAAACCTGGGA+TGG 0.656096 8_3:-8320972 Msa1274560:CDS
TGTACATGTTCTGGAAACCT+GGG 0.662881 8_3:-8320976 Msa1274560:CDS
TATACTCCCGAGGATAAGGA+TGG 0.662952 8_3:+8321131 None:intergenic
CATCAGGAAACACATAGCAA+GGG 0.663187 8_3:+8320915 None:intergenic
AGGGTACACTGATCAAATGG+TGG 0.673512 8_3:-8323101 Msa1274560:CDS
TTAGGGTGTATACACAGTGG+CGG 0.674065 8_3:-8321558 Msa1274560:CDS
ACATTGCGCCAATCCTTCTG+CGG 0.675659 8_3:-8320735 Msa1274560:CDS
GCGTGCTTGGAAAGGTTGGG+TGG 0.677063 8_3:-8321215 Msa1274560:CDS
AATACACAGTGTATCCAAGT+CGG 0.677593 8_3:+8322759 None:intergenic
GTATCATCAATATACTCCCG+AGG 0.677782 8_3:+8321121 None:intergenic
TGGGCTTGCAGAGGAAACAG+GGG 0.679746 8_3:-8321069 Msa1274560:CDS
GTATGTTGATGATAGCGCCA+GGG 0.682636 8_3:-8320501 Msa1274560:CDS
GAGGAAGTATGATGACAAGG+GGG 0.683714 8_3:-8320783 Msa1274560:CDS
CCAAGCTTGCATCACCTATG+GGG 0.689398 8_3:-8319809 Msa1274560:three_prime_UTR
GGCCAGCAGTTTGATATACG+CGG 0.695942 8_3:-8321031 Msa1274560:CDS
GGGCTTGCAGAGGAAACAGG+GGG 0.708245 8_3:-8321068 Msa1274560:CDS
GATTGTCAAGAGTTGAAGAG+TGG 0.720032 8_3:-8320680 Msa1274560:CDS
ATGTGGATCGAATTCTAGCG+GGG 0.723758 8_3:-8320585 Msa1274560:CDS
ATATGGCAACAAAATCTGTG+AGG 0.725494 8_3:-8321350 Msa1274560:CDS
ATAAGATGAGATCGATCACG+GGG 0.734729 8_3:+8321460 None:intergenic
TCTTTAGGGTGTATACACAG+TGG 0.754890 8_3:-8321561 Msa1274560:CDS
GGGGTTGTATGAGAGCAAGG+AGG 0.782796 8_3:-8323629 Msa1274560:CDS
GTGCCCAGTTAACACCACCG+AGG 0.815031 8_3:+8321647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATCAACAAAAAATAAA+GGG + chr8_3:8319998-8320017 None:intergenic 10.0%
!! AATAAATCAACAAAAAATAA+AGG + chr8_3:8319999-8320018 None:intergenic 10.0%
!! AAAACAAATTAAATAAGTAA+GGG + chr8_3:8320520-8320539 None:intergenic 10.0%
!!! TGTTTTTAAATGAAATTTTA+TGG - chr8_3:8321380-8321399 Msa1274560:CDS 10.0%
!!! TTATTTAACATTTTCTTTTT+TGG - chr8_3:8321837-8321856 Msa1274560:intron 10.0%
!! CAAAACAAATTAAATAAGTA+AGG + chr8_3:8320521-8320540 None:intergenic 15.0%
!!! ATATATCTGTTGTTTATTTA+TGG - chr8_3:8320848-8320867 Msa1274560:CDS 15.0%
!!! ATTTTTATTTTTTATGATGC+AGG - chr8_3:8320893-8320912 Msa1274560:CDS 15.0%
!! AAATTAACATTTGAATCAAT+AGG + chr8_3:8321479-8321498 None:intergenic 15.0%
!!! TGATTCAAATGTTAATTTTA+TGG - chr8_3:8321481-8321500 Msa1274560:CDS 15.0%
!!! TTTAAATATTTTATTTGTGC+TGG - chr8_3:8321545-8321564 Msa1274560:CDS 15.0%
!!! TTTGTTCTTGTATTATATTT+TGG - chr8_3:8321592-8321611 Msa1274560:CDS 15.0%
!! GAAAAAATAAAAATTGAGAA+AGG + chr8_3:8323359-8323378 None:intergenic 15.0%
!!! TTTTATTGTTAGCTTTTATT+AGG - chr8_3:8323485-8323504 Msa1274560:intron 15.0%
!!! TTTATTGTTAGCTTTTATTA+GGG - chr8_3:8323486-8323505 Msa1274560:intron 15.0%
!! ATTGAAATCGAAATTGAAAT+CGG + chr8_3:8319566-8319585 None:intergenic 20.0%
!! TCGAAAATTGAATGAAATTT+GGG + chr8_3:8319674-8319693 None:intergenic 20.0%
!! ATCGAAAATTGAATGAAATT+TGG + chr8_3:8319675-8319694 None:intergenic 20.0%
!! AATCTTAACAAAATTGCTAT+AGG + chr8_3:8320222-8320241 None:intergenic 20.0%
!!! AATGTTTATTTTTGACAGAT+GGG - chr8_3:8320317-8320336 Msa1274560:CDS 20.0%
!! AATTACCATGAAAATGTTAA+TGG + chr8_3:8320496-8320515 None:intergenic 20.0%
!!! TTCATGCTTTGATTTATTTT+TGG - chr8_3:8320695-8320714 Msa1274560:CDS 20.0%
!! AAAAATATATCACTTACTTC+AGG + chr8_3:8321223-8321242 None:intergenic 20.0%
!!! AAATCTTAGATTTGGAATAT+GGG - chr8_3:8321327-8321346 Msa1274560:CDS 20.0%
!!! AAATGTTAATTTTATGGAGT+TGG - chr8_3:8321487-8321506 Msa1274560:CDS 20.0%
!!! AATAAACAAATGAGTTGAAA+TGG + chr8_3:8321963-8321982 None:intergenic 20.0%
!!! TGTTTATTTTGAATAACTGA+TGG - chr8_3:8321975-8321994 Msa1274560:CDS 20.0%
!!! TTATTGTTAGCTTTTATTAG+GGG - chr8_3:8323487-8323506 Msa1274560:intron 20.0%
!! TTAAATTAGAACTTACCAAA+TGG + chr8_3:8323812-8323831 None:intergenic 20.0%
!! GCATAATCTTATATTGATAT+TGG - chr8_3:8324257-8324276 Msa1274560:five_prime_UTR 20.0%
! CAAAAGATGAAAACAAAAAG+AGG + chr8_3:8319455-8319474 None:intergenic 25.0%
! GAAAAGATTGGAATTTAATG+AGG + chr8_3:8319592-8319611 None:intergenic 25.0%
!!! AGATTCGATTTTTATCGATT+TGG - chr8_3:8319770-8319789 Msa1274560:three_prime_UTR 25.0%
!! GATTATGATTTTTGTAGTGT+TGG - chr8_3:8320179-8320198 Msa1274560:three_prime_UTR 25.0%
! CTATAGGCAAATAATAACAT+TGG + chr8_3:8320206-8320225 None:intergenic 25.0%
!!! GATTTTGTAATTGATGATCA+TGG - chr8_3:8320238-8320257 Msa1274560:three_prime_UTR 25.0%
!!! GAATGTTTATTTTTGACAGA+TGG - chr8_3:8320316-8320335 Msa1274560:CDS 25.0%
! ATTTAATTGTTGATGCATGT+TGG - chr8_3:8320346-8320365 Msa1274560:CDS 25.0%
! TGTTTCAGATAGTAAAAAGT+TGG - chr8_3:8320543-8320562 Msa1274560:CDS 25.0%
! GTTTCAGATAGTAAAAAGTT+GGG - chr8_3:8320544-8320563 Msa1274560:CDS 25.0%
! TTTGGTGAATTAAAACCTAA+CGG - chr8_3:8320713-8320732 Msa1274560:CDS 25.0%
!!! TGACCTTTCATATTTTTATC+AGG - chr8_3:8321042-8321061 Msa1274560:CDS 25.0%
! AAGAAATACTTGCATAAAGA+AGG + chr8_3:8321189-8321208 None:intergenic 25.0%
! GTAACTTCAAATCTTAGATT+TGG - chr8_3:8321319-8321338 Msa1274560:CDS 25.0%
!! CAAATCTTAGATTTGGAATA+TGG - chr8_3:8321326-8321345 Msa1274560:CDS 25.0%
!! AATATGGGTTGTGTTATAAT+AGG - chr8_3:8321342-8321361 Msa1274560:CDS 25.0%
!! CATCTTAATGCACATTTTTA+CGG - chr8_3:8321431-8321450 Msa1274560:CDS 25.0%
! GGAAAAAATAATACTCACAT+TGG + chr8_3:8321928-8321947 None:intergenic 25.0%
! TTATAACTTGAATTCATGCA+CGG + chr8_3:8322278-8322297 None:intergenic 25.0%
! GATATTGAACTGAATAAAGT+CGG - chr8_3:8322362-8322381 Msa1274560:intron 25.0%
! CTATTAATATGTACATGTTC+TGG - chr8_3:8322705-8322724 Msa1274560:intron 25.0%
!! TCATTTTCTTGAAGTGATTT+TGG + chr8_3:8322851-8322870 None:intergenic 25.0%
! AAAATCACTTCAAGAAAATG+AGG - chr8_3:8322850-8322869 Msa1274560:intron 25.0%
! AGTCGGTAAAAAAAAAAAAG+AGG + chr8_3:8323381-8323400 None:intergenic 25.0%
! GTTACATATACAAAGCAAAA+AGG + chr8_3:8323720-8323739 None:intergenic 25.0%
!! TTTTGCTTTGTATATGTAAC+AGG - chr8_3:8323720-8323739 Msa1274560:intron 25.0%
! AGAAATTCAACAGTTGAATT+TGG - chr8_3:8323769-8323788 Msa1274560:CDS 25.0%
!! TCCATTTTGCTAATATTTTC+AGG - chr8_3:8323841-8323860 Msa1274560:CDS 25.0%
CCTAAAATTAGGGATGAAAA+GGG + chr8_3:8319531-8319550 None:intergenic 30.0%
! CCTTTTCATCCCTAATTTTA+GGG - chr8_3:8319529-8319548 Msa1274560:three_prime_UTR 30.0%
TGAAACTAAAGGGAAAAGAT+TGG + chr8_3:8319604-8319623 None:intergenic 30.0%
CTAGAATGGATGAAACTAAA+GGG + chr8_3:8319614-8319633 None:intergenic 30.0%
! CTTTAGTTTCATCCATTCTA+GGG - chr8_3:8319613-8319632 Msa1274560:three_prime_UTR 30.0%
!!! TTCGTTGGTTTTTGATTTCT+GGG - chr8_3:8319716-8319735 Msa1274560:three_prime_UTR 30.0%
!! GTTCATTGATTTGTCTATGA+TGG - chr8_3:8319970-8319989 Msa1274560:intron 30.0%
! ATTGATGATCATGGTAACTT+AGG - chr8_3:8320247-8320266 Msa1274560:three_prime_UTR 30.0%
! TTGATGATCATGGTAACTTA+GGG - chr8_3:8320248-8320267 Msa1274560:three_prime_UTR 30.0%
!!! CATGTTGGTGATGATTTTAT+TGG - chr8_3:8320361-8320380 Msa1274560:CDS 30.0%
! ACTAGCCATTAACATTTTCA+TGG - chr8_3:8320488-8320507 Msa1274560:CDS 30.0%
TTGGTGAATTAAAACCTAAC+GGG - chr8_3:8320714-8320733 Msa1274560:CDS 30.0%
AAAAAGTTAAAAGACCCGTT+AGG + chr8_3:8320731-8320750 None:intergenic 30.0%
!! TTGCAAAGTATTGTACGATA+TGG - chr8_3:8320777-8320796 Msa1274560:CDS 30.0%
!! TGCAAAGTATTGTACGATAT+GGG - chr8_3:8320778-8320797 Msa1274560:CDS 30.0%
!!! TTTTTTATGATGCAGGTTCA+TGG - chr8_3:8320900-8320919 Msa1274560:CDS 30.0%
! ATATGCTGCCACATAAATTT+TGG - chr8_3:8320982-8321001 Msa1274560:CDS 30.0%
CCTCCTGATAAAAATATGAA+AGG + chr8_3:8321048-8321067 None:intergenic 30.0%
!! CCTTTCATATTTTTATCAGG+AGG - chr8_3:8321045-8321064 Msa1274560:CDS 30.0%
CAAACTTGAACTTCATAACT+GGG + chr8_3:8321150-8321169 None:intergenic 30.0%
TCAAACTTGAACTTCATAAC+TGG + chr8_3:8321151-8321170 None:intergenic 30.0%
! GTTATGAAGTTCAAGTTTGA+TGG - chr8_3:8321151-8321170 Msa1274560:CDS 30.0%
CGTAAAAATGTGCATTAAGA+TGG + chr8_3:8321433-8321452 None:intergenic 30.0%
!! TAATTTTATGGAGTTGGTCT+TGG - chr8_3:8321493-8321512 Msa1274560:CDS 30.0%
! AAAGCTTGTTCCAAATATTG+AGG - chr8_3:8321737-8321756 Msa1274560:intron 30.0%
GAAAATGTCACCTCAATATT+TGG + chr8_3:8321750-8321769 None:intergenic 30.0%
CATGATAAGAAATGCATAAC+AGG + chr8_3:8321772-8321791 None:intergenic 30.0%
! ATTCTTGTCTTCACATTTTC+AGG - chr8_3:8322010-8322029 Msa1274560:CDS 30.0%
! GTACCATATGTTTTCTTTGA+AGG - chr8_3:8322401-8322420 Msa1274560:intron 30.0%
TAGCCTTCAAAGAAAACATA+TGG + chr8_3:8322407-8322426 None:intergenic 30.0%
TTCAAGAAAATGAGGTTTCT+GGG - chr8_3:8322858-8322877 Msa1274560:intron 30.0%
GATTCTGTAAAACTTGGAAT+TGG - chr8_3:8323259-8323278 Msa1274560:intron 30.0%
TATCTCTTCTGTCATCATAA+AGG - chr8_3:8323407-8323426 Msa1274560:intron 30.0%
ATCTCTTCTGTCATCATAAA+GGG - chr8_3:8323408-8323427 Msa1274560:intron 30.0%
GAGAAAAGAAACAGGTAAAT+TGG + chr8_3:8323529-8323548 None:intergenic 30.0%
CAAAAAAGGAGAAAAGAAAC+AGG + chr8_3:8323537-8323556 None:intergenic 30.0%
!! TTTCTTTTCTCCTTTTTTGC+CGG - chr8_3:8323538-8323557 Msa1274560:intron 30.0%
! GTAAGTTCTAATTTAACTGC+TGG - chr8_3:8323816-8323835 Msa1274560:CDS 30.0%
GCCTGAAAATATTAGCAAAA+TGG + chr8_3:8323845-8323864 None:intergenic 30.0%
CGACTTCATTAGTATTTGTT+AGG - chr8_3:8323986-8324005 Msa1274560:five_prime_UTR 30.0%
! ATTAGTGGGCATACATTAAA+AGG - chr8_3:8324021-8324040 Msa1274560:five_prime_UTR 30.0%
!! TGCATTTTAGAGATTGAGAT+AGG - chr8_3:8324080-8324099 Msa1274560:five_prime_UTR 30.0%
!! GCATTTTAGAGATTGAGATA+GGG - chr8_3:8324081-8324100 Msa1274560:five_prime_UTR 30.0%
GTTGAGTTCATATATAACCT+CGG + chr8_3:8324178-8324197 None:intergenic 30.0%
AGAAATGTACACAAAAGACT+AGG + chr8_3:8324216-8324235 None:intergenic 30.0%
! CCCTTTTCATCCCTAATTTT+AGG - chr8_3:8319528-8319547 Msa1274560:three_prime_UTR 35.0%
CCCTAAAATTAGGGATGAAA+AGG + chr8_3:8319532-8319551 None:intergenic 35.0%
!! ATCCCTAATTTTAGGGATCT+AGG - chr8_3:8319536-8319555 Msa1274560:three_prime_UTR 35.0%
!! TCCCTAATTTTAGGGATCTA+GGG - chr8_3:8319537-8319556 Msa1274560:three_prime_UTR 35.0%
ACCCTAGATCCCTAAAATTA+GGG + chr8_3:8319541-8319560 None:intergenic 35.0%
AACCCTAGATCCCTAAAATT+AGG + chr8_3:8319542-8319561 None:intergenic 35.0%
CCTAGAATGGATGAAACTAA+AGG + chr8_3:8319615-8319634 None:intergenic 35.0%
! CCTTTAGTTTCATCCATTCT+AGG - chr8_3:8319612-8319631 Msa1274560:three_prime_UTR 35.0%
AGAAAAACGAAACCCTAGAA+TGG + chr8_3:8319628-8319647 None:intergenic 35.0%
GAAATCAAAAACCAACGAAG+AGG + chr8_3:8319715-8319734 None:intergenic 35.0%
!!! CTTCGTTGGTTTTTGATTTC+TGG - chr8_3:8319715-8319734 Msa1274560:three_prime_UTR 35.0%
!!! TCGTTGGTTTTTGATTTCTG+GGG - chr8_3:8319717-8319736 Msa1274560:three_prime_UTR 35.0%
! TTTGGTTGTGTTTGAGATCA+TGG - chr8_3:8319788-8319807 Msa1274560:three_prime_UTR 35.0%
! TTGGTTGTGTTTGAGATCAT+GGG - chr8_3:8319789-8319808 Msa1274560:three_prime_UTR 35.0%
!! GAAACAATATGGTGTCACAA+AGG - chr8_3:8319875-8319894 Msa1274560:three_prime_UTR 35.0%
! TGTCACAAAGGCTATTTCAA+TGG - chr8_3:8319887-8319906 Msa1274560:three_prime_UTR 35.0%
TAGGAAAAGGACTCAACAAT+TGG - chr8_3:8319929-8319948 Msa1274560:three_prime_UTR 35.0%
TTGGAGAAGGTTTGATTGAT+AGG - chr8_3:8319948-8319967 Msa1274560:three_prime_UTR 35.0%
AATGCTGTCATTCTCACATT+TGG - chr8_3:8320620-8320639 Msa1274560:CDS 35.0%
!! ACATTTGGTTCTTATCGTCT+TGG - chr8_3:8320635-8320654 Msa1274560:CDS 35.0%
AATACACAGTGTATCCAAGT+CGG + chr8_3:8320934-8320953 None:intergenic 35.0%
ACTTGGATACACTGTGTATT+GGG - chr8_3:8320934-8320953 Msa1274560:CDS 35.0%
GCACACAACCAAAATTTATG+TGG + chr8_3:8320993-8321012 None:intergenic 35.0%
TGAAGTTACTGATGTGACTA+GGG + chr8_3:8321308-8321327 None:intergenic 35.0%
TTGAAGTTACTGATGTGACT+AGG + chr8_3:8321309-8321328 None:intergenic 35.0%
!! TTGGTCTTGGTGTTATTAAG+AGG - chr8_3:8321506-8321525 Msa1274560:CDS 35.0%
CAGTGTGCAACAATTAGAAA+TGG + chr8_3:8321804-8321823 None:intergenic 35.0%
! TTGAAATGGTTTGTAAGAGG+AGG + chr8_3:8321949-8321968 None:intergenic 35.0%
! GAGTTGAAATGGTTTGTAAG+AGG + chr8_3:8321952-8321971 None:intergenic 35.0%
GAACATAACATGACAGGATT+TGG + chr8_3:8322161-8322180 None:intergenic 35.0%
TCTATCGAACATAACATGAC+AGG + chr8_3:8322167-8322186 None:intergenic 35.0%
TGTCATGTTATGTTCGATAG+AGG - chr8_3:8322166-8322185 Msa1274560:intron 35.0%
! CACAGATTTTGTTGCCATAT+TGG + chr8_3:8322340-8322359 None:intergenic 35.0%
ATATGGCAACAAAATCTGTG+AGG - chr8_3:8322340-8322359 Msa1274560:intron 35.0%
ATGATTGAGCGTGATACTAT+TGG - chr8_3:8322524-8322543 Msa1274560:CDS 35.0%
TGATTGAGCGTGATACTATT+GGG - chr8_3:8322525-8322544 Msa1274560:CDS 35.0%
! GGGAGTATATTGATGATACA+AGG - chr8_3:8322573-8322592 Msa1274560:CDS 35.0%
TTCACATAGTGCTTTCTTCA+TGG - chr8_3:8322601-8322620 Msa1274560:CDS 35.0%
TCACATAGTGCTTTCTTCAT+GGG - chr8_3:8322602-8322621 Msa1274560:CDS 35.0%
CTTCAAGAAAATGAGGTTTC+TGG - chr8_3:8322857-8322876 Msa1274560:intron 35.0%
! TAAGAGGAAGTATGATGACA+AGG - chr8_3:8322904-8322923 Msa1274560:intron 35.0%
! AAGAGGAAGTATGATGACAA+GGG - chr8_3:8322905-8322924 Msa1274560:intron 35.0%
TGATACAGACGCAACATATT+CGG + chr8_3:8323161-8323180 None:intergenic 35.0%
! TTTTACAGAATCTGCCATGT+AGG + chr8_3:8323251-8323270 None:intergenic 35.0%
ATGGCAGATTCTGTAAAACT+TGG - chr8_3:8323253-8323272 Msa1274560:intron 35.0%
AAAACTTGGAATTGGTACAC+TGG - chr8_3:8323267-8323286 Msa1274560:intron 35.0%
AGACACATTACAGACACATT+TGG - chr8_3:8323315-8323334 Msa1274560:intron 35.0%
GATGTTTCTTGATTCTACGA+AGG - chr8_3:8323588-8323607 Msa1274560:CDS 35.0%
CTGTTCCAAAGACAGTAATA+AGG - chr8_3:8323629-8323648 Msa1274560:CDS 35.0%
! ACTTGCCTTATTACTGTCTT+TGG + chr8_3:8323637-8323656 None:intergenic 35.0%
ATTAGAACTTACCAAATGGC+TGG + chr8_3:8323808-8323827 None:intergenic 35.0%
!! CTAATATTTTCAGGCTTGCT+TGG - chr8_3:8323850-8323869 Msa1274560:CDS 35.0%
AGGATTCTTGCTGAAATTAG+TGG - chr8_3:8324006-8324025 Msa1274560:five_prime_UTR 35.0%
GGATTCTTGCTGAAATTAGT+GGG - chr8_3:8324007-8324026 Msa1274560:five_prime_UTR 35.0%
TTAGAGATTGAGATAGGGAA+AGG - chr8_3:8324086-8324105 Msa1274560:five_prime_UTR 35.0%
! AGCGTGTGTGTAAAGTGTTT+AGG + chr8_3:8319418-8319437 None:intergenic 40.0%
! AACAAACAAAAGCACGATCG+TGG + chr8_3:8319481-8319500 None:intergenic 40.0%
GATGAAAAGGGATCTGAAGA+GGG + chr8_3:8319519-8319538 None:intergenic 40.0%
!! AGATCATGGGTAGTTCTGAA+GGG - chr8_3:8319802-8319821 Msa1274560:three_prime_UTR 40.0%
! GTGACACCATATTGTTTCTC+CGG + chr8_3:8319873-8319892 None:intergenic 40.0%
! ACAAAGGCTATTTCAATGGC+TGG - chr8_3:8319891-8319910 Msa1274560:three_prime_UTR 40.0%
! CTTTTCCTATCAGCACTTGT+TGG + chr8_3:8319918-8319937 None:intergenic 40.0%
!! CAACAAGTGCTGATAGGAAA+AGG - chr8_3:8319916-8319935 Msa1274560:three_prime_UTR 40.0%
AAGGACTCAACAATTGGAGA+AGG - chr8_3:8319935-8319954 Msa1274560:three_prime_UTR 40.0%
GAAGAGGTTCTTCATAGACT+TGG - chr8_3:8320098-8320117 Msa1274560:three_prime_UTR 40.0%
TCATGGTAACTTAGGGATGT+AGG - chr8_3:8320255-8320274 Msa1274560:three_prime_UTR 40.0%
CATGGTAACTTAGGGATGTA+GGG - chr8_3:8320256-8320275 Msa1274560:three_prime_UTR 40.0%
ATGGTAACTTAGGGATGTAG+GGG - chr8_3:8320257-8320276 Msa1274560:three_prime_UTR 40.0%
GGGGTAAATATGGAACTGTA+TGG - chr8_3:8320277-8320296 Msa1274560:exon 40.0%
TTTGATCAGTGTACCCTTTC+AGG + chr8_3:8320586-8320605 None:intergenic 40.0%
! GAAAGGGTACACTGATCAAA+TGG - chr8_3:8320586-8320605 Msa1274560:CDS 40.0%
ATCAAAGCATGAAGATGTGC+AGG + chr8_3:8320688-8320707 None:intergenic 40.0%
GACTTGGATACACTGTGTAT+TGG - chr8_3:8320933-8320952 Msa1274560:CDS 40.0%
!!! CCAGGTGGTTGTTTTGATAA+AGG + chr8_3:8321261-8321280 None:intergenic 40.0%
CCTTTATCAAAACAACCACC+TGG - chr8_3:8321258-8321277 Msa1274560:CDS 40.0%
AAACAACCACCTGGATGAAA+AGG - chr8_3:8321267-8321286 Msa1274560:CDS 40.0%
AACAACCACCTGGATGAAAA+GGG - chr8_3:8321268-8321287 Msa1274560:CDS 40.0%
GATGTGACTAGGGTAAAGTA+TGG + chr8_3:8321298-8321317 None:intergenic 40.0%
! TTTGTTTCTCTCTTGTGAGC+AGG - chr8_3:8321623-8321642 Msa1274560:CDS 40.0%
CCATTCAAACTTCGAACAGT+AGG + chr8_3:8321693-8321712 None:intergenic 40.0%
CCTACTGTTCGAAGTTTGAA+TGG - chr8_3:8321690-8321709 Msa1274560:intron 40.0%
AGTACTTTCGAACAACACTC+CGG - chr8_3:8321865-8321884 Msa1274560:intron 40.0%
! GGAATAAACACCTCGTCTTT+TGG + chr8_3:8321907-8321926 None:intergenic 40.0%
!!! TCTTCACATTTTCAGGTGAC+AGG - chr8_3:8322017-8322036 Msa1274560:CDS 40.0%
GAACTGCATTTGGATACAAC+TGG + chr8_3:8322088-8322107 None:intergenic 40.0%
TGCTTGTCTCTCGATTCTTT+AGG - chr8_3:8322114-8322133 Msa1274560:intron 40.0%
GCTTGTCTCTCGATTCTTTA+GGG - chr8_3:8322115-8322134 Msa1274560:intron 40.0%
!! TCTTTAGGGTGTATACACAG+TGG - chr8_3:8322129-8322148 Msa1274560:intron 40.0%
ATAAGATGAGATCGATCACG+GGG + chr8_3:8322233-8322252 None:intergenic 40.0%
CATAAGATGAGATCGATCAC+GGG + chr8_3:8322234-8322253 None:intergenic 40.0%
GCATAAGATGAGATCGATCA+CGG + chr8_3:8322235-8322254 None:intergenic 40.0%
TGAATTCATGCACGGATATG+CGG + chr8_3:8322270-8322289 None:intergenic 40.0%
! AAGCACACTTCGAGTTATGA+TGG - chr8_3:8322307-8322326 Msa1274560:intron 40.0%
! ATGATGGAGCAGTTCCAATA+TGG - chr8_3:8322323-8322342 Msa1274560:intron 40.0%
TTGAACTGAATAAAGTCGGC+TGG - chr8_3:8322366-8322385 Msa1274560:intron 40.0%
TCAATATACTCCCGAGGATA+AGG + chr8_3:8322566-8322585 None:intergenic 40.0%
GTATCATCAATATACTCCCG+AGG + chr8_3:8322572-8322591 None:intergenic 40.0%
!! ATGTACATGTTCTGGAAACC+TGG - chr8_3:8322713-8322732 Msa1274560:intron 40.0%
!! TGTACATGTTCTGGAAACCT+GGG - chr8_3:8322714-8322733 Msa1274560:intron 40.0%
ATGTTTCACACATCCGTAGA+AGG - chr8_3:8322747-8322766 Msa1274560:CDS 40.0%
CATCAGGAAACACATAGCAA+GGG + chr8_3:8322778-8322797 None:intergenic 40.0%
! CGAGATCGTTTAAAACCATC+AGG + chr8_3:8322794-8322813 None:intergenic 40.0%
TTAAACGATCTCGACCATCA+AGG - chr8_3:8322801-8322820 Msa1274560:intron 40.0%
!! TTTCTGGGACTGAACTTTGT+GGG - chr8_3:8322873-8322892 Msa1274560:intron 40.0%
TTTGTGGGAGGAACATTAAG+AGG - chr8_3:8322888-8322907 Msa1274560:intron 40.0%
! AGAGGAAGTATGATGACAAG+GGG - chr8_3:8322906-8322925 Msa1274560:intron 40.0%
GATTGTCAAGAGTTGAAGAG+TGG - chr8_3:8323010-8323029 Msa1274560:intron 40.0%
CAACTCATCTTGCTCACTAT+TGG + chr8_3:8323053-8323072 None:intergenic 40.0%
CAATAGTGAGCAAGATGAGT+TGG - chr8_3:8323051-8323070 Msa1274560:intron 40.0%
GAATGTGGATCGAATTCTAG+CGG - chr8_3:8323103-8323122 Msa1274560:CDS 40.0%
AATGTGGATCGAATTCTAGC+GGG - chr8_3:8323104-8323123 Msa1274560:CDS 40.0%
GATACAGACGCAACATATTC+GGG + chr8_3:8323160-8323179 None:intergenic 40.0%
ATATGTTGCGTCTGTATCAG+TGG - chr8_3:8323162-8323181 Msa1274560:intron 40.0%
TAGATTCGATACCACCTACA+TGG - chr8_3:8323234-8323253 Msa1274560:intron 40.0%
CACATTACAGACACATTTGG+AGG - chr8_3:8323318-8323337 Msa1274560:intron 40.0%
! ACAGACACATTTGGAGGTTT+TGG - chr8_3:8323324-8323343 Msa1274560:intron 40.0%
CAGAAGAGATACATCGAAGT+CGG + chr8_3:8323398-8323417 None:intergenic 40.0%
TGCTGTTAAGCCAATTGCAA+TGG - chr8_3:8323561-8323580 Msa1274560:intron 40.0%
TTAAGCCAATTGCAATGGCA+GGG - chr8_3:8323566-8323585 Msa1274560:intron 40.0%
ATTGAAGAAAGCCAGCCATT+TGG - chr8_3:8323794-8323813 Msa1274560:CDS 40.0%
TTGGCATTAATCTGAAGAGC+CGG - chr8_3:8323909-8323928 Msa1274560:five_prime_UTR 40.0%
! TCTTTGGTCTTCTGTACAGT+TGG - chr8_3:8323942-8323961 Msa1274560:five_prime_UTR 40.0%
!! GTTGGCGATTTTTGTTTGTG+TGG - chr8_3:8323960-8323979 Msa1274560:five_prime_UTR 40.0%
AGATTGAGATAGGGAAAGGA+GGG - chr8_3:8324090-8324109 Msa1274560:five_prime_UTR 40.0%
AGTGATTGTTGTACTTTCCG+AGG - chr8_3:8324158-8324177 Msa1274560:five_prime_UTR 40.0%
! GACTAGGTTGAGATCATCAT+AGG + chr8_3:8324200-8324219 None:intergenic 40.0%
ATCTGAAGAGGGAAAAGGGA+AGG + chr8_3:8319508-8319527 None:intergenic 45.0%
AGGGATCTGAAGAGGGAAAA+GGG + chr8_3:8319512-8319531 None:intergenic 45.0%
AAGGGATCTGAAGAGGGAAA+AGG + chr8_3:8319513-8319532 None:intergenic 45.0%
GGATGAAAAGGGATCTGAAG+AGG + chr8_3:8319520-8319539 None:intergenic 45.0%
!! CTTGCTTTTGTCCTCTTCGT+TGG - chr8_3:8319701-8319720 Msa1274560:three_prime_UTR 45.0%
!! GAGATCATGGGTAGTTCTGA+AGG - chr8_3:8319801-8319820 Msa1274560:three_prime_UTR 45.0%
!! ATGGGTAGTTCTGAAGGGTT+GGG - chr8_3:8319807-8319826 Msa1274560:three_prime_UTR 45.0%
! GTCGCAGTTTCTCGTTGATT+CGG - chr8_3:8320040-8320059 Msa1274560:intron 45.0%
!! TCGCAGTTTCTCGTTGATTC+GGG - chr8_3:8320041-8320060 Msa1274560:intron 45.0%
GGTTCTTCATAGACTTGGAC+AGG - chr8_3:8320103-8320122 Msa1274560:three_prime_UTR 45.0%
TGGTAACTTAGGGATGTAGG+GGG - chr8_3:8320258-8320277 Msa1274560:three_prime_UTR 45.0%
AGGGATGTAGGGGGTAAATA+TGG - chr8_3:8320267-8320286 Msa1274560:exon 45.0%
AGGGTACACTGATCAAATGG+TGG - chr8_3:8320589-8320608 Msa1274560:CDS 45.0%
AAGATGTGCAGGTCAAGCAT+GGG + chr8_3:8320677-8320696 None:intergenic 45.0%
CTACACGTTCCATGATATCC+TGG - chr8_3:8321075-8321094 Msa1274560:CDS 45.0%
TAACTTCATCCATGCTAGCC+AGG + chr8_3:8321096-8321115 None:intergenic 45.0%
TACTGAACTGCAACCAGTTC+CGG - chr8_3:8321114-8321133 Msa1274560:CDS 45.0%
ACAACCACCTGGATGAAAAG+GGG - chr8_3:8321269-8321288 Msa1274560:CDS 45.0%
TCTCTCTTGTGAGCAGGAAT+TGG - chr8_3:8321629-8321648 Msa1274560:CDS 45.0%
! ACTCCGGTGCTTGAAGTTTT+GGG - chr8_3:8321881-8321900 Msa1274560:intron 45.0%
!!! AAGTTTTGGGCCAAAAGACG+AGG - chr8_3:8321894-8321913 Msa1274560:intron 45.0%
! TTTCAGGTGACAGGTTTCCT+CGG - chr8_3:8322026-8322045 Msa1274560:CDS 45.0%
! TTTCCTCGGTGGTGTTAACT+GGG - chr8_3:8322040-8322059 Msa1274560:CDS 45.0%
AGCATGCTTGGAACTGCATT+TGG + chr8_3:8322098-8322117 None:intergenic 45.0%
AATCGAGAGACAAGCATGCT+TGG + chr8_3:8322110-8322129 None:intergenic 45.0%
TTAGGGTGTATACACAGTGG+CGG - chr8_3:8322132-8322151 Msa1274560:intron 45.0%
GGATATGCGGGAGTTATGAT+TGG + chr8_3:8322257-8322276 None:intergenic 45.0%
GAATTCATGCACGGATATGC+GGG + chr8_3:8322269-8322288 None:intergenic 45.0%
!! ATGTTGATGACTTGCGTGCT+TGG - chr8_3:8322462-8322481 Msa1274560:intron 45.0%
TATACTCCCGAGGATAAGGA+TGG + chr8_3:8322562-8322581 None:intergenic 45.0%
TTCCGCGTATATCAAACTGC+TGG + chr8_3:8322664-8322683 None:intergenic 45.0%
! GCGGAACTGTTGAAGCATTT+CGG - chr8_3:8322678-8322697 Msa1274560:intron 45.0%
GAAACATGAATGTCCATCCC+AGG + chr8_3:8322734-8322753 None:intergenic 45.0%
AGCAAGGGATTTGCCTTCTA+CGG + chr8_3:8322763-8322782 None:intergenic 45.0%
CCATCAGGAAACACATAGCA+AGG + chr8_3:8322779-8322798 None:intergenic 45.0%
! CCTTGCTATGTGTTTCCTGA+TGG - chr8_3:8322776-8322795 Msa1274560:CDS 45.0%
ACTGGTACTGTTGACCTTGA+TGG + chr8_3:8322818-8322837 None:intergenic 45.0%
ATCAAGGTCAACAGTACCAG+TGG - chr8_3:8322817-8322836 Msa1274560:intron 45.0%
! GATTTTGGACGATTCTCCAC+TGG + chr8_3:8322836-8322855 None:intergenic 45.0%
!! GTTTCTGGGACTGAACTTTG+TGG - chr8_3:8322872-8322891 Msa1274560:intron 45.0%
! GAGGAAGTATGATGACAAGG+GGG - chr8_3:8322907-8322926 Msa1274560:intron 45.0%
AGAAGAATGTCTCCAGAAGC+TGG - chr8_3:8323076-8323095 Msa1274560:CDS 45.0%
GAAGAATGTCTCCAGAAGCT+GGG - chr8_3:8323077-8323096 Msa1274560:CDS 45.0%
ATGTGGATCGAATTCTAGCG+GGG - chr8_3:8323105-8323124 Msa1274560:CDS 45.0%
ACATCTGTTTCGAGCGAAGA+TGG - chr8_3:8323130-8323149 Msa1274560:CDS 45.0%
!! GTATGTTGATGATAGCGCCA+GGG - chr8_3:8323189-8323208 Msa1274560:intron 45.0%
TACAGAATCTGCCATGTAGG+TGG + chr8_3:8323248-8323267 None:intergenic 45.0%
TAAAGGGACACTAGTGCATG+TGG - chr8_3:8323424-8323443 Msa1274560:intron 45.0%
!! CTTAACAGCACCGGCAAAAA+AGG + chr8_3:8323551-8323570 None:intergenic 45.0%
! TGCAATTGGCTTAACAGCAC+CGG + chr8_3:8323560-8323579 None:intergenic 45.0%
GTTAAGCCAATTGCAATGGC+AGG - chr8_3:8323565-8323584 Msa1274560:intron 45.0%
AACATCCCTGCCATTGCAAT+TGG + chr8_3:8323574-8323593 None:intergenic 45.0%
TAGGTGATGCAAGCTTGGTT+TGG + chr8_3:8323879-8323898 None:intergenic 45.0%
AACCAAGCTTGCATCACCTA+TGG - chr8_3:8323879-8323898 Msa1274560:CDS 45.0%
ACCAAGCTTGCATCACCTAT+GGG - chr8_3:8323880-8323899 Msa1274560:CDS 45.0%
TAATGCCAATCAGTCCCCAT+AGG + chr8_3:8323898-8323917 None:intergenic 45.0%
TGGCATTAATCTGAAGAGCC+GGG - chr8_3:8323910-8323929 Msa1274560:five_prime_UTR 45.0%
GAGATTGAGATAGGGAAAGG+AGG - chr8_3:8324089-8324108 Msa1274560:five_prime_UTR 45.0%
GAAGAGGGAAAAGGGAAGGA+GGG + chr8_3:8319504-8319523 None:intergenic 50.0%
TGAAGAGGGAAAAGGGAAGG+AGG + chr8_3:8319505-8319524 None:intergenic 50.0%
!! CATGGGTAGTTCTGAAGGGT+TGG - chr8_3:8319806-8319825 Msa1274560:three_prime_UTR 50.0%
GCTGTGCCGGAGAAACAATA+TGG - chr8_3:8319864-8319883 Msa1274560:three_prime_UTR 50.0%
!! CTGGTCCAACAAGTGCTGAT+AGG - chr8_3:8319910-8319929 Msa1274560:three_prime_UTR 50.0%
!! CGCAGTTTCTCGTTGATTCG+GGG - chr8_3:8320042-8320061 Msa1274560:intron 50.0%
TTCGGGGTTGTATGAGAGCA+AGG - chr8_3:8320058-8320077 Msa1274560:intron 50.0%
GTTGTATGAGAGCAAGGAGG+AGG - chr8_3:8320064-8320083 Msa1274560:three_prime_UTR 50.0%
AAGCACCTTACTCGCCTGAA+AGG - chr8_3:8320569-8320588 Msa1274560:CDS 50.0%
AGCACCTTACTCGCCTGAAA+GGG - chr8_3:8320570-8320589 Msa1274560:CDS 50.0%
TGTACCCTTTCAGGCGAGTA+AGG + chr8_3:8320577-8320596 None:intergenic 50.0%
AGATGTGCAGGTCAAGCATG+GGG + chr8_3:8320676-8320695 None:intergenic 50.0%
GAAGATGTGCAGGTCAAGCA+TGG + chr8_3:8320678-8320697 None:intergenic 50.0%
ATGATGCAGGTTCATGGACC+TGG - chr8_3:8320906-8320925 Msa1274560:CDS 50.0%
ATCTACCTCGCGGTTCACAT+AGG + chr8_3:8320964-8320983 None:intergenic 50.0%
CCATGCTAGCCAGGATATCA+TGG + chr8_3:8321087-8321106 None:intergenic 50.0%
CCATGATATCCTGGCTAGCA+TGG - chr8_3:8321084-8321103 Msa1274560:CDS 50.0%
ATAACTGGGACATGAGCGTC+CGG + chr8_3:8321136-8321155 None:intergenic 50.0%
! ATGGTTGCCCCTTTTCATCC+AGG + chr8_3:8321279-8321298 None:intergenic 50.0%
! CACTCCGGTGCTTGAAGTTT+TGG - chr8_3:8321880-8321899 Msa1274560:intron 50.0%
TGGCCCAAAACTTCAAGCAC+CGG + chr8_3:8321887-8321906 None:intergenic 50.0%
! GTTTCCTCGGTGGTGTTAAC+TGG - chr8_3:8322039-8322058 Msa1274560:CDS 50.0%
TCGATAGAGGAGAACGAGCT+TGG - chr8_3:8322179-8322198 Msa1274560:intron 50.0%
CGATAGAGGAGAACGAGCTT+GGG - chr8_3:8322180-8322199 Msa1274560:intron 50.0%
! ACGAGCTTGGGTTTTCTGTG+TGG - chr8_3:8322192-8322211 Msa1274560:intron 50.0%
CGATCACGGGGATTTCTAAG+AGG + chr8_3:8322221-8322240 None:intergenic 50.0%
! GATGACTTGCGTGCTTGGAA+AGG - chr8_3:8322467-8322486 Msa1274560:intron 50.0%
ACTTGCGTGCTTGGAAAGGT+TGG - chr8_3:8322471-8322490 Msa1274560:intron 50.0%
CTTGCGTGCTTGGAAAGGTT+GGG - chr8_3:8322472-8322491 Msa1274560:intron 50.0%
TCATCAAAGTCAGCTGCCGA+AGG + chr8_3:8322508-8322527 None:intergenic 50.0%
TGCAGTGCCATCCTTATCCT+CGG - chr8_3:8322552-8322571 Msa1274560:CDS 50.0%
CTTTCTTCATGGGCTTGCAG+AGG - chr8_3:8322612-8322631 Msa1274560:CDS 50.0%
ATGGGCTTGCAGAGGAAACA+GGG - chr8_3:8322620-8322639 Msa1274560:CDS 50.0%
GGCCAGCAGTTTGATATACG+CGG - chr8_3:8322659-8322678 Msa1274560:intron 50.0%
!! CATGTTCTGGAAACCTGGGA+TGG - chr8_3:8322718-8322737 Msa1274560:intron 50.0%
ACATTGCGCCAATCCTTCTG+CGG - chr8_3:8322955-8322974 Msa1274560:intron 50.0%
TTGCGTCTGTATCAGTGGCA+GGG - chr8_3:8323167-8323186 Msa1274560:intron 50.0%
!! GGTATGTTGATGATAGCGCC+AGG - chr8_3:8323188-8323207 Msa1274560:intron 50.0%
CCAAGCTTGCATCACCTATG+GGG - chr8_3:8323881-8323900 Msa1274560:CDS 50.0%
CATCACCTATGGGGACTGAT+TGG - chr8_3:8323890-8323909 Msa1274560:exon 50.0%
GGCATTAATCTGAAGAGCCG+GGG - chr8_3:8323911-8323930 Msa1274560:five_prime_UTR 50.0%
GACCAAAGAAAGTCATGCCC+CGG + chr8_3:8323931-8323950 None:intergenic 50.0%
TGAGATAGGGAAAGGAGGGT+AGG - chr8_3:8324094-8324113 Msa1274560:five_prime_UTR 50.0%
GAGATAGGGAAAGGAGGGTA+GGG - chr8_3:8324095-8324114 Msa1274560:five_prime_UTR 50.0%
AGATAGGGAAAGGAGGGTAG+GGG - chr8_3:8324096-8324115 Msa1274560:five_prime_UTR 50.0%
GCCTGCGAATTCTTCTTCGC+AGG - chr8_3:8319842-8319861 Msa1274560:three_prime_UTR 55.0%
GCCTGCGAAGAAGAATTCGC+AGG + chr8_3:8319846-8319865 None:intergenic 55.0%
TTCTTCTTCGCAGGCTGTGC+CGG - chr8_3:8319851-8319870 Msa1274560:three_prime_UTR 55.0%
GGGGTTGTATGAGAGCAAGG+AGG - chr8_3:8320061-8320080 Msa1274560:intron 55.0%
CAAGGAGGAGGCTGACAAGA+GGG - chr8_3:8320076-8320095 Msa1274560:three_prime_UTR 55.0%
! AGTGTATCCAAGTCGGCTCC+AGG + chr8_3:8320927-8320946 None:intergenic 55.0%
ACCTCGCGGTTCACATAGGA+TGG + chr8_3:8320960-8320979 None:intergenic 55.0%
GTGGCAGCATATCTACCTCG+CGG + chr8_3:8320974-8320993 None:intergenic 55.0%
! GTTGCCCCTTTTCATCCAGG+TGG + chr8_3:8321276-8321295 None:intergenic 55.0%
GTTGGGTGGAATCACGCCTT+CGG - chr8_3:8322489-8322508 Msa1274560:CDS 55.0%
GCAGTGCCATCCTTATCCTC+GGG - chr8_3:8322553-8322572 Msa1274560:CDS 55.0%
CATGGGCTTGCAGAGGAAAC+AGG - chr8_3:8322619-8322638 Msa1274560:CDS 55.0%
TGGGCTTGCAGAGGAAACAG+GGG - chr8_3:8322621-8322640 Msa1274560:CDS 55.0%
CAGGGGGAGGTTGTTCAAGA+AGG - chr8_3:8322638-8322657 Msa1274560:intron 55.0%
CTGGGACTGAACTTTGTGGG+AGG - chr8_3:8322876-8322895 Msa1274560:intron 55.0%
TGATGACAAGGGGGTGAAGC+AGG - chr8_3:8322916-8322935 Msa1274560:intron 55.0%
CAAGCTCTCCGCAGAAGGAT+TGG + chr8_3:8322966-8322985 None:intergenic 55.0%
GTTGTCAAGCTCTCCGCAGA+AGG + chr8_3:8322971-8322990 None:intergenic 55.0%
TCTGCGGAGAGCTTGACAAC+TGG - chr8_3:8322971-8322990 Msa1274560:intron 55.0%
CCACATTCAGTCCCAGCTTC+TGG + chr8_3:8323091-8323110 None:intergenic 55.0%
CCAGAAGCTGGGACTGAATG+TGG - chr8_3:8323088-8323107 Msa1274560:CDS 55.0%
GTTGCGTCTGTATCAGTGGC+AGG - chr8_3:8323166-8323185 Msa1274560:intron 55.0%
GTTCATTGCCTCAACAGCCC+TGG + chr8_3:8323209-8323228 None:intergenic 55.0%
CCCCATAGGTGATGCAAGCT+TGG + chr8_3:8323884-8323903 None:intergenic 55.0%
AGCCGGGGCATGACTTTCTT+TGG - chr8_3:8323926-8323945 Msa1274560:five_prime_UTR 55.0%
GATAGGGAAAGGAGGGTAGG+GGG - chr8_3:8324097-8324116 Msa1274560:five_prime_UTR 55.0%
GCAAGGAGGAGGCTGACAAG+AGG - chr8_3:8320075-8320094 Msa1274560:three_prime_UTR 60.0%
GGAGGCTGACAAGAGGGAAG+AGG - chr8_3:8320082-8320101 Msa1274560:three_prime_UTR 60.0%
TCATGGACCTGGAGCCGACT+TGG - chr8_3:8320917-8320936 Msa1274560:CDS 60.0%
GCCATCCTATGTGAACCGCG+AGG - chr8_3:8320956-8320975 Msa1274560:CDS 60.0%
CAGGTGACAGGTTTCCTCGG+TGG - chr8_3:8322029-8322048 Msa1274560:CDS 60.0%
GTGCCCAGTTAACACCACCG+AGG + chr8_3:8322046-8322065 None:intergenic 60.0%
GGGTGTATACACAGTGGCGG+TGG - chr8_3:8322135-8322154 Msa1274560:intron 60.0%
GCGTGCTTGGAAAGGTTGGG+TGG - chr8_3:8322475-8322494 Msa1274560:intron 60.0%
GGGCTTGCAGAGGAAACAGG+GGG - chr8_3:8322622-8322641 Msa1274560:CDS 60.0%
CTTGCAGAGGAAACAGGGGG+AGG - chr8_3:8322625-8322644 Msa1274560:CDS 60.0%
! TGATAGCGCCAGGGCTGTTG+AGG - chr8_3:8323198-8323217 Msa1274560:intron 60.0%
GGGACATGAGCGTCCGGAAC+TGG + chr8_3:8321130-8321149 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 8319415 8324297 8319415 ID=Msa1274560;Name=Msa1274560
chr8_3 mRNA 8319415 8324297 8319415 ID=Msa1274560-mRNA-1;Parent=Msa1274560;Name=Msa1274560-mRNA-1;_AED=0.11;_eAED=0.11;_QI=392|1|1|1|0.87|0.88|9|780|710
chr8_3 exon 8319415 8319970 8319415 ID=Msa1274560-mRNA-1:exon:3395;Parent=Msa1274560-mRNA-1
chr8_3 exon 8320062 8321680 8320062 ID=Msa1274560-mRNA-1:exon:3394;Parent=Msa1274560-mRNA-1
chr8_3 exon 8321783 8321845 8321783 ID=Msa1274560-mRNA-1:exon:3393;Parent=Msa1274560-mRNA-1
chr8_3 exon 8321954 8322067 8321954 ID=Msa1274560-mRNA-1:exon:3392;Parent=Msa1274560-mRNA-1
chr8_3 exon 8322487 8322648 8322487 ID=Msa1274560-mRNA-1:exon:3391;Parent=Msa1274560-mRNA-1
chr8_3 exon 8322735 8322797 8322735 ID=Msa1274560-mRNA-1:exon:3390;Parent=Msa1274560-mRNA-1
chr8_3 exon 8323054 8323161 8323054 ID=Msa1274560-mRNA-1:exon:3389;Parent=Msa1274560-mRNA-1
chr8_3 exon 8323588 8323665 8323588 ID=Msa1274560-mRNA-1:exon:3388;Parent=Msa1274560-mRNA-1
chr8_3 exon 8323756 8324297 8323756 ID=Msa1274560-mRNA-1:exon:3387;Parent=Msa1274560-mRNA-1
chr8_3 five_prime_UTR 8323906 8324297 8323906 ID=Msa1274560-mRNA-1:five_prime_utr;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8323756 8323905 8323756 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8323588 8323665 8323588 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8323054 8323161 8323054 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8322735 8322797 8322735 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8322487 8322648 8322487 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8321954 8322067 8321954 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8321783 8321845 8321783 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 CDS 8320286 8321680 8320286 ID=Msa1274560-mRNA-1:cds;Parent=Msa1274560-mRNA-1
chr8_3 three_prime_UTR 8320062 8320285 8320062 ID=Msa1274560-mRNA-1:three_prime_utr;Parent=Msa1274560-mRNA-1
chr8_3 three_prime_UTR 8319415 8319970 8319415 ID=Msa1274560-mRNA-1:three_prime_utr;Parent=Msa1274560-mRNA-1
Gene Sequence

>Msa1274560

ATGGGTAGTTCTGAAGGGTTGGGAGCATCATCAAAGCCTGCGAATTCTTCTTCGCAGGCTGTGCCGGAGAAACAATATGGTGTCACAAAGGCTATTTCAATGGCTGGTCCAACAAGTGCTGATAGGAAAAGGACTCAACAATTGGAGAAGTTTCTCGTTGATTCGGGGTTGTATGAGAGCAAGGAGGAGGCTGACAAGAGGGAAGAGGTTCTTCATAGACTTGGACAGATAGTAAAAAGTTGGGTAAAGCACCTTACTCGCCTGAAAGGGTACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATTCTCACATTTGGTTCTTATCGTCTTGGTGTTCATGGACCTGGAGCCGACTTGGATACACTGTGTATTGGGCCATCCTATGTGAACCGCGAGGAGGATTTTTTCTACACGTTCCATGATATCCTGGCTAGCATGGATGAAGTTACTGAACTGCAACCAGTTCCGGACGCTCATGTCCCAGTTATGAAGTTCAAGTTTGATGGAATTTCGATCGACCTTCTTTATGCAAGTATTTCTTGCTTGATTGTACCTGAAGAATTGGATATATCTGATGTCTCTGTTCTACATAATATTGATGAGCCTACTGTTCGAAGTTTGAATGGTTGTAGAGTTGCAGATCAAATTCTAAAGCTTGTTCCAAATATTGAGTACTTTCGAACAACACTCCGGTGCTTGAAGTTTTGGGCCAAAAGACGAGGTGTTTATTCCAATGTGACAGGTTTCCTCGGTGGTGTTAACTGGGCACTTCTTGTAGCTCGAGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTGTATACACAGTGGCGGTGGCCAAATCCTGTCATGTTATGTTCGATAGAGGAGAACGAGCTTGGGTTTTCTGTGTGGCATCCTCTTAGAAATCCCCGTGATCGATCTCATCTTATGCCAATCATAACTCCCGCATATCCGTGCATGAATTCAAGTTATAATGTTTCTGCAAGCACACTTCGAGTTATGATGGAGCAGTTCCAATATGGCAACAAAATCTGTGAGGATATTGAACTGAATAAAGTCGGCTGGAGTGCTCTGTTTGTACCATATGTTTTCTTTGAAGGCTACAAAAACTTTCTGCAAATTGACGTAGTTGCTGCTGATGTTGATGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGGCAGCTGACTTTGATGATTGAGCGTGATACTATTGGGAAGTTGCAGTGCCATCCTTATCCTCGGGAGTATATTGATGATACAAGGAAATGTTCACATAGTGCTTTCTTCATGGGCTTGCAGAGGAAACAGGGGGAGGTTGTTCAAGAAGGCCAGCAGTTTGATATACGCGGAACTGTTGAAGCATTTCGGCATTCTATTAATATGTACATGTTCTGGAAACCTGGGATGGACATTCATGTTTCACACATCCGTAGAAGGCAAATCCCTTGCTATGTGTTTCCTGATGGTTTTAAACGATCTCGACCATCAAGGTCAACAGTACCAGTGGAGAATCGTCCAAAATCACTTCAAGAAAATGAGGTTTCTGGGACTGAACTTTGTGGGAGGAACATTAAGAGGAAGTATGATGACAAGGGGGTGAAGCAGGATGTTGTACTGAAAAAACATTGCGCCAATCCTTCTGCGGAGAGCTTGACAACTGGCAACTACGCTGTATCTGATTGTCAAGAGTTGAAGAGTGGTGAGAGTACGAGTTTGACCAATAGTGAGCAAGATGAGTTGGATAGAAGAATGTCTCCAGAAGCTGGGACTGAATGTGGATCGAATTCTAGCGGGGTTACATCTGTTTCGAGCGAAGATGGCTCTCCCGAATATGTTGCGTCTGTATCAGTGGCAGGGTATGTTGATGATAGCGCCAGGGCTGTTGAGGCAATGAACAACAGTAGATTCGATACCACCTACATGGCAGATTCTGTAAAACTTGGAATTGGTACACTGGTCAGTGCAAACAATGAAGTATTACAAGACACATTACAGACACATTTGGAGGTTTTGGCTTTCAATTCCTTTCTCAATTTTTATTTTTTCCTCTTTTTTTTTTTTACCGACTTCGATGTATCTCTTCTGTCATCATAA
Protein sequence

>Msa1274560

MGSSEGLGASSKPANSSSQAVPEKQYGVTKAISMAGPTSADRKRTQQLEKFLVDSGLYESKEEADKREEVLHRLGQIVKSWVKHLTRLKGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTVPVENRPKSLQENEVSGTELCGRNIKRKYDDKGVKQDVVLKKHCANPSAESLTTGNYAVSDCQELKSGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTSVSSEDGSPEYVASVSVAGYVDDSARAVEAMNNSRFDTTYMADSVKLGIGTLVSANNEVLQDTLQTHLEVLAFNSFLNFYFFLFFFFTDFDVSLLSS*