AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025490 MtrunA17_Chr1g0180261 98.173 821 11 1 1 817 1 821 0.0 1662
Msa0025490 MtrunA17_Chr8g0380791 51.407 782 344 10 44 812 6 764 0.0 771
Msa0025490 MtrunA17_Chr1g0171491 41.577 837 401 19 3 811 14 790 0.0 597
Msa0025490 MtrunA17_Chr8g0353121 42.529 783 348 16 47 811 49 747 0.0 582
Msa0025490 MtrunA17_Chr7g0256301 43.406 781 367 17 47 811 67 788 0.0 581
Msa0025490 MtrunA17_Chr7g0256301 33.588 131 64 1 45 175 134 241 3.84e-15 79.7
Msa0025490 MtrunA17_Chr5g0424301 42.396 743 318 16 97 811 69 729 0.0 537
Msa0025490 MtrunA17_Chr5g0424301 48.066 181 85 1 42 213 60 240 9.64e-52 193
Msa0025490 MtrunA17_Chr3g0115111 40.288 834 348 17 8 814 21 731 2.07e-180 536
Msa0025490 MtrunA17_Chr3g0082501 40.868 783 360 18 47 811 60 757 5.31e-176 525
Msa0025490 MtrunA17_Chr3g0082501 36.000 100 63 1 46 145 151 249 5.17e-11 66.6
Msa0025490 MtrunA17_Chr3g0131001 41.555 746 306 16 97 811 55 701 7.87e-169 505
Msa0025490 MtrunA17_Chr3g0131001 49.714 175 88 0 47 221 51 225 6.19e-47 178
Msa0025490 MtrunA17_Chr8g0385201 52.860 437 145 7 386 811 277 663 5.14e-145 442
Msa0025490 MtrunA17_Chr8g0385201 47.337 169 88 1 44 211 23 191 1.06e-46 177
Msa0025490 MtrunA17_Chr8g0385201 35.036 137 88 1 97 232 30 166 1.82e-16 84.0
Msa0025490 MtrunA17_Chr8g0377191 38.043 184 114 0 47 230 8 191 2.71e-38 141
Msa0025490 MtrunA17_Chr8g0377191 31.967 122 83 0 52 173 82 203 2.92e-16 78.2
Msa0025490 MtrunA17_Chr8g0377191 29.907 107 75 0 46 152 99 205 1.11e-12 67.8
Msa0025490 MtrunA17_Chr8g0382971 32.317 328 197 5 37 364 11 313 2.14e-36 140
Msa0025490 MtrunA17_Chr8g0382971 33.333 195 128 1 28 220 46 240 4.98e-27 113
Msa0025490 MtrunA17_Chr8g0377671 40.323 186 111 0 45 230 14 199 4.29e-36 138
Msa0025490 MtrunA17_Chr8g0377671 35.802 162 104 0 46 207 107 268 5.51e-24 102
Msa0025490 MtrunA17_Chr4g0059911 40.000 180 107 1 53 231 11 190 6.40e-32 128
Msa0025490 MtrunA17_Chr4g0059911 31.739 230 148 2 48 272 53 278 9.18e-28 116
Msa0025490 MtrunA17_Chr4g0059911 30.909 165 91 1 46 187 74 238 2.29e-15 79.0
Msa0025490 MtrunA17_Chr2g0316611 34.649 228 144 3 46 272 100 323 1.27e-29 121
Msa0025490 MtrunA17_Chr2g0316611 34.783 230 145 3 44 272 29 254 2.54e-29 120
Msa0025490 MtrunA17_Chr2g0316611 36.735 196 123 1 46 240 169 364 1.11e-28 119
Msa0025490 MtrunA17_Chr2g0316611 35.385 130 84 0 46 175 238 367 3.44e-19 90.5
Msa0025490 MtrunA17_Chr2g0316631 33.333 237 152 4 44 279 29 260 5.62e-28 115
Msa0025490 MtrunA17_Chr2g0316631 34.872 195 126 1 46 239 100 294 1.22e-26 111
Msa0025490 MtrunA17_Chr6g0467061 32.340 235 146 2 46 279 83 305 1.38e-27 114
Msa0025490 MtrunA17_Chr6g0467061 35.533 197 98 3 50 246 18 185 1.00e-25 109
Msa0025490 MtrunA17_Chr6g0467061 34.239 184 121 0 46 229 152 335 1.78e-22 99.8
Msa0025490 MtrunA17_Chr8g0377221 32.900 231 116 3 50 241 4 234 5.34e-27 111
Msa0025490 MtrunA17_Chr8g0385241 27.532 385 189 11 56 364 15 385 3.75e-25 109
Msa0025490 MtrunA17_Chr8g0385241 32.212 208 128 3 26 220 98 305 1.18e-22 101
Msa0025490 MtrunA17_Chr8g0385241 30.573 157 108 1 45 200 175 331 5.37e-13 72.0
Msa0025490 MtrunA17_Chr8g0385241 34.426 122 80 0 101 222 14 135 1.87e-12 70.5
Msa0025490 MtrunA17_Chr8g0377211 39.231 130 79 0 78 207 23 152 4.88e-22 94.0
Msa0025490 MtrunA17_Chr8g0377211 42.991 107 61 0 124 230 23 129 8.61e-22 93.2
Msa0025490 MtrunA17_Chr8g0377211 30.769 117 81 0 45 161 36 152 5.69e-11 62.0
Msa0025490 MtrunA17_Chr8g0336161 33.721 172 91 1 56 227 225 373 5.56e-21 97.1
Msa0025490 MtrunA17_Chr8g0336161 29.282 181 105 1 52 232 198 355 2.89e-19 91.7
Msa0025490 MtrunA17_Chr8g0336161 34.074 135 89 0 46 180 238 372 7.75e-13 71.6
Msa0025490 MtrunA17_Chr8g0336161 34.545 110 72 0 124 233 201 310 9.32e-13 71.2
Msa0025490 MtrunA17_Chr7g0233351 32.258 186 123 1 52 234 193 378 8.23e-21 96.3
Msa0025490 MtrunA17_Chr7g0233351 32.298 161 109 0 72 232 190 350 1.50e-20 95.5
Msa0025490 MtrunA17_Chr7g0233351 33.871 124 59 1 133 233 182 305 3.44e-12 69.7
Msa0025490 MtrunA17_Chr4g0055371 30.049 203 134 2 72 274 170 364 1.08e-20 95.9
Msa0025490 MtrunA17_Chr4g0055371 31.818 176 120 0 52 227 173 348 7.02e-20 93.2
Msa0025490 MtrunA17_Chr4g0055371 29.592 196 131 3 8 203 159 347 9.59e-18 86.7
Msa0025490 MtrunA17_Chr4g0055371 33.133 166 86 3 68 233 145 285 1.02e-14 77.4
Msa0025490 MtrunA17_Chr3g0114791 32.121 165 112 0 68 232 179 343 1.43e-20 95.5
Msa0025490 MtrunA17_Chr3g0114791 30.636 173 120 0 52 224 186 358 1.66e-18 89.0
Msa0025490 MtrunA17_Chr3g0114791 33.333 138 69 2 96 233 184 298 2.78e-14 75.9
Msa0025490 MtrunA17_Chr3g0114791 29.730 148 81 1 56 180 213 360 4.81e-13 72.0
Msa0025490 MtrunA17_Chr5g0424111 31.609 174 119 0 59 232 182 355 3.36e-20 94.4
Msa0025490 MtrunA17_Chr5g0424111 32.948 173 116 0 52 224 198 370 7.62e-20 93.2
Msa0025490 MtrunA17_Chr5g0424111 34.058 138 68 2 96 233 196 310 2.10e-15 79.7
Msa0025490 MtrunA17_Chr5g0424111 34.848 132 86 0 49 180 241 372 1.13e-13 74.3
Msa0025490 MtrunA17_Chr8g0383331 32.484 157 101 2 94 245 1 157 5.14e-18 82.0
Msa0025490 MtrunA17_Chr8g0383331 32.667 150 101 0 48 197 1 150 8.08e-18 81.6
Msa0025490 MtrunA17_Chr8g0383331 31.757 148 101 0 73 220 3 150 8.39e-15 72.8
Msa0025490 MtrunA17_Chr5g0398011 34.752 141 69 1 48 188 32 149 1.32e-16 77.8
Msa0025490 MtrunA17_Chr5g0398011 36.036 111 71 0 97 207 35 145 1.47e-14 72.0
Msa0025490 MtrunA17_Chr5g0398021 33.594 128 62 1 48 175 10 114 2.07e-14 71.6
Msa0025490 MtrunA17_Chr5g0398021 34.694 98 64 0 99 196 15 112 4.81e-11 62.0
Msa0025490 MtrunA17_Chr8g0383551 28.774 212 103 8 56 219 33 244 6.87e-14 74.3
Msa0025490 MtrunA17_Chr8g0383551 31.169 154 94 3 73 214 109 262 4.98e-13 71.6
Msa0025490 MtrunA17_Chr8g0383551 25.364 343 200 13 78 389 32 349 6.34e-13 71.2
Msa0025490 MtrunA17_Chr8g0377201 43.750 64 36 0 142 205 3 66 8.92e-13 64.7
Msa0025490 MtrunA17_Chr1g0210831 26.490 151 88 1 53 203 615 742 1.83e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025490 AT3G09920.3 73.006 815 204 6 6 814 8 812 0.0 1235
Msa0025490 AT3G09920.4 73.006 815 204 6 6 814 8 812 0.0 1235
Msa0025490 AT3G09920.2 73.006 815 204 6 6 814 8 812 0.0 1235
Msa0025490 AT3G09920.1 73.006 815 204 6 6 814 8 812 0.0 1235
Msa0025490 AT1G60890.1 50.448 781 357 8 44 812 4 766 0.0 764
Msa0025490 AT1G60890.2 50.449 779 356 8 46 812 18 778 0.0 763
Msa0025490 AT1G10900.2 49.615 780 352 11 43 812 3 751 0.0 746
Msa0025490 AT1G10900.1 49.615 780 352 11 43 812 3 751 0.0 746
Msa0025490 AT1G10900.3 49.615 780 352 11 43 812 3 751 0.0 746
Msa0025490 AT2G41210.1 43.325 794 348 15 38 811 57 768 0.0 622
Msa0025490 AT3G56960.2 42.985 784 354 15 46 811 67 775 0.0 611
Msa0025490 AT3G56960.1 42.985 784 354 15 46 811 67 775 0.0 611
Msa0025490 AT1G21980.1 42.838 740 331 14 97 811 76 748 0.0 543
Msa0025490 AT1G21980.1 48.295 176 91 0 47 222 72 247 7.76e-51 191
Msa0025490 AT1G21980.1 29.927 137 71 2 37 173 133 244 8.95e-13 72.8
Msa0025490 AT1G77740.2 43.221 745 322 16 97 811 77 750 4.83e-180 536
Msa0025490 AT1G77740.2 46.591 176 94 0 47 222 73 248 2.08e-51 193
Msa0025490 AT1G77740.2 36.905 84 53 0 46 129 164 247 2.70e-11 67.8
Msa0025490 AT1G77740.1 43.221 745 322 16 97 811 77 750 4.83e-180 536
Msa0025490 AT1G77740.1 46.591 176 94 0 47 222 73 248 2.08e-51 193
Msa0025490 AT1G77740.1 36.905 84 53 0 46 129 164 247 2.70e-11 67.8
Msa0025490 AT2G26420.2 38.564 822 373 12 7 811 9 715 4.36e-177 527
Msa0025490 AT2G26420.3 38.564 822 373 12 7 811 9 715 4.36e-177 527
Msa0025490 AT2G26420.1 38.808 822 357 14 7 811 9 701 2.53e-176 525
Msa0025490 AT3G07960.1 40.000 785 367 20 47 811 11 711 3.92e-175 522
Msa0025490 AT3G07960.1 34.483 174 68 1 46 173 22 195 5.78e-28 120
Msa0025490 AT3G07960.3 40.422 616 309 13 47 649 11 581 3.20e-143 436
Msa0025490 AT3G07960.3 34.483 174 68 1 46 173 22 195 7.36e-28 120
Msa0025490 AT3G07960.2 40.422 616 309 13 47 649 11 581 3.52e-143 436
Msa0025490 AT3G07960.2 34.483 174 68 1 46 173 22 195 9.96e-28 119
Msa0025490 AT3G07960.4 40.422 616 309 13 47 649 11 581 3.52e-143 436
Msa0025490 AT3G07960.4 34.483 174 68 1 46 173 22 195 9.96e-28 119
Msa0025490 AT4G01190.3 37.037 405 228 6 424 811 6 400 3.78e-83 272
Msa0025490 AT4G01190.2 37.037 405 228 6 424 811 6 400 3.78e-83 272
Msa0025490 AT4G01190.1 38.786 379 205 6 450 811 22 390 7.65e-83 271
Msa0025490 AT1G01460.1 37.619 420 226 7 424 811 4 419 2.91e-82 270
Msa0025490 AT1G77660.1 33.333 165 110 0 68 232 172 336 2.20e-21 98.2
Msa0025490 AT1G77660.1 31.429 175 120 0 50 224 177 351 7.49e-19 90.5
Msa0025490 AT1G77660.1 34.058 138 68 2 96 233 177 291 4.34e-15 79.0
Msa0025490 AT1G77660.1 28.378 148 83 1 56 180 206 353 5.17e-12 69.3
Msa0025490 AT4G17080.1 33.125 160 107 0 73 232 256 415 3.28e-21 98.6
Msa0025490 AT4G17080.1 32.759 174 117 0 52 225 258 431 3.43e-20 95.5
Msa0025490 AT4G17080.1 33.108 148 99 0 56 203 285 432 1.68e-19 93.2
Msa0025490 AT4G17080.1 34.532 139 68 2 95 233 255 370 7.15e-15 79.0
Msa0025490 AT4G17080.1 33.846 130 86 0 52 181 304 433 3.14e-13 73.6
Msa0025490 AT2G35170.1 33.548 155 103 0 78 232 230 384 6.06e-21 97.4
Msa0025490 AT2G35170.1 35.135 148 96 0 56 203 254 401 1.05e-20 97.1
Msa0025490 AT2G35170.1 32.353 170 115 0 56 225 231 400 7.75e-20 94.4
Msa0025490 AT2G35170.1 35.211 142 92 0 53 194 274 415 2.36e-15 80.1
Msa0025490 AT2G35170.1 34.586 133 64 2 101 233 230 339 9.97e-14 75.1
Msa0025490 AT1G21920.1 32.727 165 111 0 68 232 168 332 6.95e-21 96.7
Msa0025490 AT1G21920.1 35.135 148 96 0 56 203 202 349 5.52e-19 90.9
Msa0025490 AT1G21920.1 31.159 138 72 2 96 233 173 287 6.69e-13 72.0
Msa0025490 AT1G21920.2 32.727 165 111 0 68 232 168 332 1.39e-20 95.1
Msa0025490 AT1G21920.2 35.135 148 96 0 56 203 202 349 1.10e-18 89.4
Msa0025490 AT1G21920.2 31.159 138 72 2 96 233 173 287 1.87e-12 70.1
Msa0025490 AT1G75010.1 25.676 148 87 1 56 203 607 731 2.36e-12 71.2
Msa0025490 AT1G75010.1 31.496 127 87 0 99 225 604 730 3.83e-11 67.4
Msa0025490 AT1G71010.1 30.097 206 120 8 457 645 1378 1576 8.40e-11 66.6

Find 262 sgRNAs with CRISPR-Local

Find 564 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTAGGTCAGACTTTC+TGG 0.032461 1_1:+48655753 None:intergenic
GGCTAACGGAAATGTATATT+TGG 0.153313 1_1:-48655616 Msa0025490:CDS
CATAGAAGATTTGATTTAAA+AGG 0.178433 1_1:-48651847 Msa0025490:CDS
CATATATTCACGCTCCAAAA+TGG 0.193595 1_1:+48655068 None:intergenic
CCCTTGAAACTTTGTCCTTT+TGG 0.197545 1_1:+48656240 None:intergenic
TAACGAAAAGATCCCCATTT+TGG 0.204980 1_1:-48655082 Msa0025490:CDS
TAACACTGCTTCAGTTGATA+TGG 0.226428 1_1:-48655307 Msa0025490:CDS
GAAGTTCGAGCATCGGATTT+TGG 0.230682 1_1:-48653858 Msa0025490:CDS
GGAAAACGAGTAGCGAAATT+TGG 0.236150 1_1:-48657606 Msa0025490:five_prime_UTR
CATCATCTTCTTCAATCTTT+AGG 0.241653 1_1:-48657701 Msa0025490:five_prime_UTR
CCGTTTGTCAATATAGATAT+AGG 0.267813 1_1:+48656038 None:intergenic
ATTCTACTCTCGTCGCTTCC+TGG 0.269786 1_1:-48649178 Msa0025490:CDS
GGTATCTGCTCTGCCCTTGC+TGG 0.270097 1_1:+48649360 None:intergenic
CCCGGTGAACAAATTATTAA+AGG 0.280312 1_1:-48654943 Msa0025490:CDS
TTTGAAGGAAGCTGGTTAAA+TGG 0.303077 1_1:-48655531 Msa0025490:CDS
GTCAATTGAGAACCTTCTTT+AGG 0.304786 1_1:+48653807 None:intergenic
ATGGACTATAGTCTTCTTCT+AGG 0.307126 1_1:-48651112 Msa0025490:CDS
TGAGACTGACAGCAAGTTCT+TGG 0.307848 1_1:-48651149 Msa0025490:CDS
CTGGCATGTTCACACCTAAC+TGG 0.309968 1_1:+48649379 None:intergenic
CTTTATCCTGGCACATTTGA+TGG 0.312989 1_1:+48649135 None:intergenic
GATGGCAGACAGCTTCCTTT+TGG 0.316804 1_1:+48655411 None:intergenic
GAATACCACTCTTAAAGATT+TGG 0.317905 1_1:-48651782 Msa0025490:CDS
CAGTTCCGCTTTGTTGTAAT+GGG 0.331322 1_1:-48651898 Msa0025490:CDS
TGAAAGGCGGTGGAGTTTAG+AGG 0.341412 1_1:-48655184 Msa0025490:CDS
GAGATTGATCCAGATTTAAC+AGG 0.341541 1_1:+48655226 None:intergenic
TCTCAACGCTCTTTGCTTGC+TGG 0.342286 1_1:+48657553 None:intergenic
GGGAAAATACAATGGCCTTC+TGG 0.345502 1_1:-48655837 Msa0025490:CDS
CACAGAAAACCTGTTAAATC+TGG 0.351274 1_1:-48655235 Msa0025490:CDS
CGGCAACGTTCCCGAGGGTC+AGG 0.351945 1_1:-48655928 Msa0025490:CDS
CGCATATACTTGGGGTGATG+GGG 0.352244 1_1:-48655490 Msa0025490:CDS
CTGGCCCCTCAGGATTTCCT+TGG 0.353999 1_1:+48655652 None:intergenic
ATTACTGCCCTATGGTGTTC+AGG 0.369775 1_1:-48653749 Msa0025490:intron
CAGGCAAAGGAACCCTTACC+TGG 0.372399 1_1:-48655569 Msa0025490:CDS
TTAGTTTGCAGCTCGGAATA+AGG 0.372857 1_1:-48654897 Msa0025490:intron
CCTAATGGCGAGTCATATTC+CGG 0.375150 1_1:-48655960 Msa0025490:CDS
GAATCGCCATCGACCTTTGT+AGG 0.376437 1_1:+48655740 None:intergenic
CATTTGATGGGAACACTCTC+TGG 0.376496 1_1:+48649148 None:intergenic
CACGGTACAGGATCATATAT+TGG 0.377388 1_1:-48655777 Msa0025490:CDS
GGTCATTCCACTGAAATTGC+TGG 0.377930 1_1:-48656008 Msa0025490:CDS
GCAGTTCCGCTTTGTTGTAA+TGG 0.378074 1_1:-48651899 Msa0025490:intron
TCTTGTAGCTGTTGAGAATC+CGG 0.379553 1_1:-48656177 Msa0025490:five_prime_UTR
AGGGGCCAGGCAAGTATACC+TGG 0.381587 1_1:-48655638 Msa0025490:CDS
ATGGTCTTGGCGCATATACT+TGG 0.382832 1_1:-48655500 Msa0025490:CDS
GAGATATATTTGAAGGCTCT+TGG 0.382922 1_1:-48655677 Msa0025490:CDS
GTTTGATTCGTTATCTATAT+CGG 0.383128 1_1:-48649214 Msa0025490:CDS
GCCTTTAATAATTTGTTCAC+CGG 0.383988 1_1:+48654942 None:intergenic
TTGCTTGCTGGCTATAGTCT+AGG 0.386472 1_1:+48657565 None:intergenic
TCGAACTTCTCGTCTCTGTA+TGG 0.387041 1_1:+48653872 None:intergenic
GCGCATATACTTGGGGTGAT+GGG 0.388619 1_1:-48655491 Msa0025490:CDS
AAGGTCTTGTTCTGGTCCCT+CGG 0.390579 1_1:-48650157 Msa0025490:CDS
CGAACTTCTCGTCTCTGTAT+GGG 0.392097 1_1:+48653873 None:intergenic
GGGATAGTTATAATTCTATA+AGG 0.394517 1_1:-48656156 Msa0025490:five_prime_UTR
CGTGGCCACAGTTAGTAGTT+TGG 0.396056 1_1:-48656099 Msa0025490:CDS
TTCACATGATGATGATAATC+TGG 0.397576 1_1:+48652221 None:intergenic
ACAAAGCATGCATGCACAAA+AGG 0.398202 1_1:+48649055 None:intergenic
GTATACTTGCCTGGCCCCTC+AGG 0.398524 1_1:+48655642 None:intergenic
CCATCTGAACTTATACTAAC+AGG 0.402778 1_1:+48651055 None:intergenic
CTTTGTAGGTCAGACTTTCT+GGG 0.403996 1_1:+48655754 None:intergenic
AGAATAAAGTCAAGTGTTGT+AGG 0.407972 1_1:+48657512 None:intergenic
ATATATTCACGCTCCAAAAT+GGG 0.411809 1_1:+48655069 None:intergenic
CCGGAATATGACTCGCCATT+AGG 0.412364 1_1:+48655960 None:intergenic
GGCGCATATACTTGGGGTGA+TGG 0.412463 1_1:-48655492 Msa0025490:CDS
CAAAGCATCATTTCCACAAA+TGG 0.412721 1_1:+48653025 None:intergenic
CTCATCGATTTCTATCTTGT+CGG 0.415967 1_1:+48651804 None:intergenic
ATTCATCCAAAAGCTTGCTT+TGG 0.417999 1_1:+48653833 None:intergenic
TAACAGGAGGACGCAGCTGC+TGG 0.418233 1_1:+48651071 None:intergenic
TTGGTGCCAAAGCAAGCTTT+TGG 0.418662 1_1:-48653839 Msa0025490:CDS
GCTAACGGAAATGTATATTT+GGG 0.418772 1_1:-48655615 Msa0025490:CDS
GATTTAAAAGGTTCATCCCT+TGG 0.420681 1_1:-48651835 Msa0025490:CDS
TCATATTCCGGATCCCTTCT+CGG 0.428398 1_1:-48655948 Msa0025490:CDS
AGGTCTTGTTCTGGTCCCTC+GGG 0.429600 1_1:-48650156 Msa0025490:CDS
CTATCCTCAAGGTCTTGTTC+TGG 0.430649 1_1:-48650165 Msa0025490:CDS
TAGTATAAGTTCAGATGGTT+TGG 0.431889 1_1:-48651050 Msa0025490:CDS
CCTTCAAATATATCTCCATT+TGG 0.434696 1_1:+48655684 None:intergenic
TTTGGTGAGACCCGGAGAAC+AGG 0.435312 1_1:-48655273 Msa0025490:CDS
ACGGAACACCACCTGTTCTC+CGG 0.436364 1_1:+48655262 None:intergenic
GCATATACTTGGGGTGATGG+GGG 0.437543 1_1:-48655489 Msa0025490:CDS
GGTTATCAAGTTTATCCAAA+TGG 0.441746 1_1:-48655699 Msa0025490:CDS
GATATGGGAAATGCTAGATT+TGG 0.444711 1_1:-48655291 Msa0025490:CDS
TTACTTGGAGCCGTCTTGGC+GGG 0.446907 1_1:-48651743 Msa0025490:CDS
CGATTGCGAGCTTCAGCTGC+TGG 0.449991 1_1:-48650086 Msa0025490:CDS
ATGAAAGGTGGGACAATGTC+AGG 0.450369 1_1:-48655588 Msa0025490:CDS
AGCTGCTGGTGACGAGGAGG+TGG 0.451559 1_1:-48650072 Msa0025490:CDS
CCAAATGGAGATATATTTGA+AGG 0.451632 1_1:-48655684 Msa0025490:CDS
AGATTTGAGAAAACAGAATC+AGG 0.458804 1_1:-48655340 Msa0025490:CDS
AACGTTGCCGAGAAGGGATC+CGG 0.460862 1_1:+48655941 None:intergenic
AGACATGCATAATGATCAAA+AGG 0.461373 1_1:+48656127 None:intergenic
ATATGATGGTGAGTGGAGAC+GGG 0.461506 1_1:-48655877 Msa0025490:CDS
CATATACTTGGGGTGATGGG+GGG 0.462159 1_1:-48655488 Msa0025490:CDS
CAAAACGAAACGAAACTCAT+TGG 0.463122 1_1:-48657627 Msa0025490:five_prime_UTR
TATATGATGGTGAGTGGAGA+CGG 0.465323 1_1:-48655878 Msa0025490:CDS
AGAACAGGTGGTGTTCCGTC+TGG 0.468196 1_1:-48655258 Msa0025490:CDS
AAGATTACAACATGACTAAG+AGG 0.470669 1_1:-48649263 Msa0025490:CDS
CGGAACACCACCTGTTCTCC+GGG 0.474120 1_1:+48655263 None:intergenic
TTATAGAATTATAACTATCC+CGG 0.476448 1_1:+48656158 None:intergenic
CTATGTTGGGACATGGACAC+GGG 0.476652 1_1:-48655463 Msa0025490:CDS
TGCAGACTTCAAATCCAGTT+AGG 0.478493 1_1:-48649393 Msa0025490:intron
CGTTTGTCAATATAGATATA+GGG 0.484716 1_1:+48656039 None:intergenic
GCAAGGGCAGAGCAGATACC+AGG 0.484764 1_1:-48649357 Msa0025490:CDS
TTGAGAGAACTATCGTCTCC+AGG 0.486817 1_1:-48653005 Msa0025490:CDS
GCTATGTTGGGACATGGACA+CGG 0.491026 1_1:-48655464 Msa0025490:CDS
AGACAAGAATGGTTGCAGAT+AGG 0.491551 1_1:+48656197 None:intergenic
CTTGGAGGAACAGCACATAA+TGG 0.491731 1_1:-48651131 Msa0025490:CDS
ATATTGACAAACGGCGAAGC+TGG 0.492267 1_1:-48656029 Msa0025490:CDS
CAAGGAAATCCTGAGGGGCC+AGG 0.493390 1_1:-48655651 Msa0025490:CDS
CCTGTTAGTATAAGTTCAGA+TGG 0.493551 1_1:-48651055 Msa0025490:CDS
AACACTGCTTCAGTTGATAT+GGG 0.495094 1_1:-48655306 Msa0025490:CDS
AGGGTCAGGGTAAGTATGTA+TGG 0.497129 1_1:-48655914 Msa0025490:CDS
GCAAGAATGTTTCTCTTGAA+AGG 0.498157 1_1:-48655200 Msa0025490:CDS
ATGTTTCTCTTGAAAGGCGG+TGG 0.498163 1_1:-48655194 Msa0025490:CDS
GTTAACCTCTTTATTTCCAT+CGG 0.499478 1_1:+48655101 None:intergenic
GTAGCTATTGAGAAAGTGAT+TGG 0.500108 1_1:-48655162 Msa0025490:CDS
AACAGGAGGACGCAGCTGCT+GGG 0.500261 1_1:+48651072 None:intergenic
GGGGAACTCTCTCTTCCTAA+TGG 0.501996 1_1:-48655975 Msa0025490:CDS
TTTGAAGGCTCTTGGATCCA+AGG 0.502212 1_1:-48655669 Msa0025490:CDS
TATACCTTCAAGTGGCCAAA+AGG 0.503382 1_1:-48652150 Msa0025490:intron
AATGGTATGATGCATGGTCT+TGG 0.506505 1_1:-48655513 Msa0025490:CDS
TTCGTTATCTATATCGGCGG+TGG 0.508660 1_1:-48649208 Msa0025490:CDS
GAGACTCGTTTGAAGGAAGC+TGG 0.508961 1_1:-48655539 Msa0025490:CDS
CTCGGGAACGTTGCCGAGAA+GGG 0.509049 1_1:+48655935 None:intergenic
GCCAAAAGGACAAAGTTTCA+AGG 0.509283 1_1:-48656241 Msa0025490:five_prime_UTR
AAGTTACTCAAACTTTATCC+TGG 0.509319 1_1:+48649123 None:intergenic
TTCAATCTTAAACATGGCCT+AGG 0.509691 1_1:-48655720 Msa0025490:CDS
GTAAGTGGAGACTCGTTTGA+AGG 0.510136 1_1:-48655546 Msa0025490:CDS
AGTCTCCACTTACCCAGGTA+AGG 0.510329 1_1:+48655556 None:intergenic
CTTGTAGCTGTTGAGAATCC+GGG 0.511102 1_1:-48656176 Msa0025490:five_prime_UTR
GTCCCTCGGGGAGCAGATGA+TGG 0.512041 1_1:-48650143 Msa0025490:CDS
CCTCGGGAACGTTGCCGAGA+AGG 0.514362 1_1:+48655934 None:intergenic
TTGTATGAAGGTGAATTCTC+TGG 0.515684 1_1:-48655810 Msa0025490:CDS
TTTATCCTGGCACATTTGAT+GGG 0.518514 1_1:+48649136 None:intergenic
TTTACTTGGAGCCGTCTTGG+CGG 0.518574 1_1:-48651744 Msa0025490:CDS
AGATATACTTCTTGTGCAGA+TGG 0.519993 1_1:+48655393 None:intergenic
TAAACTAACCTGAACACCAT+AGG 0.523925 1_1:+48653741 None:intergenic
GGAACCCTTACCTGGGTAAG+TGG 0.524147 1_1:-48655561 Msa0025490:CDS
AAGAATTACCTTGCAGTACC+AGG 0.524982 1_1:+48650038 None:intergenic
ACTGAGAAGATCAGAAGTAA+AGG 0.525732 1_1:-48652928 Msa0025490:intron
GGTGGCTATATCCACGGTAC+AGG 0.525855 1_1:-48655789 Msa0025490:CDS
GAACTTCTCGTCTCTGTATG+GGG 0.526707 1_1:+48653874 None:intergenic
GACTGACAGCAAGTTCTTGG+AGG 0.527070 1_1:-48651146 Msa0025490:CDS
ATGGAAAGATTACTGCCCTA+TGG 0.530066 1_1:-48653757 Msa0025490:CDS
ACATACTTACCCTGACCCTC+GGG 0.531555 1_1:+48655918 None:intergenic
CAAAGCATGCATGCACAAAA+GGG 0.532040 1_1:+48649056 None:intergenic
GATGATGGTAGTGTTGTTGT+CGG 0.532990 1_1:-48650128 Msa0025490:CDS
TGGTCTTGGCGCATATACTT+GGG 0.533338 1_1:-48655499 Msa0025490:CDS
TACATACTTACCCTGACCCT+CGG 0.534192 1_1:+48655917 None:intergenic
GACTACATGATGTCCATTTG+TGG 0.535966 1_1:-48653038 Msa0025490:CDS
ATTTGGGAAATATGAAAGGT+GGG 0.536411 1_1:-48655599 Msa0025490:CDS
GTGTTCCCATCAAATGTGCC+AGG 0.537171 1_1:-48649141 Msa0025490:CDS
CCTTTAATAATTTGTTCACC+GGG 0.538422 1_1:+48654943 None:intergenic
AGAGCAGATACCAGGAAAAG+AGG 0.538731 1_1:-48649349 Msa0025490:CDS
AAATTGCCAAAGATATCAAA+AGG 0.539194 1_1:-48654966 Msa0025490:CDS
CCTATATCTATATTGACAAA+CGG 0.539708 1_1:-48656038 Msa0025490:CDS
TTATGACGTCGTACTATACC+TGG 0.539798 1_1:-48649304 Msa0025490:CDS
TATTTGGGAAATATGAAAGG+TGG 0.542050 1_1:-48655600 Msa0025490:CDS
GCCAAAGATATCAAAAGGCC+CGG 0.542683 1_1:-48654961 Msa0025490:CDS
CTATCGTCTCCAGGGAAAAG+TGG 0.543810 1_1:-48652996 Msa0025490:CDS
AGCTTCAGCTGCTGGTGACG+AGG 0.544007 1_1:-48650078 Msa0025490:CDS
ACACTCTCTGGATAAAATCC+AGG 0.545133 1_1:+48649160 None:intergenic
TTAGCCCAGGTATACTTGCC+TGG 0.547788 1_1:+48655633 None:intergenic
AAGCGACGAGAGTAGAATGT+AGG 0.549703 1_1:+48649183 None:intergenic
ACAGGAGGACGCAGCTGCTG+GGG 0.554405 1_1:+48651073 None:intergenic
GGTAAGTATGTATGGTCAGA+TGG 0.555310 1_1:-48655906 Msa0025490:CDS
AGTTTCAAGGGTCAATCACT+TGG 0.555849 1_1:-48656228 Msa0025490:five_prime_UTR
ACGGATTCAGTCTTCGCCGA+TGG 0.557719 1_1:-48655117 Msa0025490:CDS
AACAAATTATTAAAGGCCAC+AGG 0.558304 1_1:-48654936 Msa0025490:CDS
TAAAGTCAAGTGTTGTAGGT+GGG 0.558407 1_1:+48657516 None:intergenic
TCAGTGTCTTGATCATGAAA+CGG 0.559373 1_1:+48652946 None:intergenic
ATATGTTCTGCACAGAATTG+AGG 0.559541 1_1:-48651873 Msa0025490:CDS
TTCTCTGGTGGCTATATCCA+CGG 0.561216 1_1:-48655795 Msa0025490:CDS
TTGGCAATGCTTGCAGAGGA+AGG 0.564272 1_1:-48651031 Msa0025490:intron
CAGCAGCTGAAGCTCGCAAT+CGG 0.564387 1_1:+48650087 None:intergenic
AAACTAACCTGAACACCATA+GGG 0.565431 1_1:+48653742 None:intergenic
CCTTCTGGTGTGTTGTATGA+AGG 0.565486 1_1:-48655822 Msa0025490:CDS
TTGGATAAACTTGATAACCT+AGG 0.565805 1_1:+48655703 None:intergenic
GTTGTCGGGTCACACATTAG+AGG 0.566169 1_1:-48650113 Msa0025490:CDS
TCTTGTCGGAAGAACGTCCA+AGG 0.570830 1_1:+48651818 None:intergenic
ATATACATTTCCGTTAGCCC+AGG 0.571683 1_1:+48655620 None:intergenic
CCTTCTCGGCAACGTTCCCG+AGG 0.572618 1_1:-48655934 Msa0025490:CDS
GTATATTTGGGAAATATGAA+AGG 0.572931 1_1:-48655603 Msa0025490:CDS
TGATTCACAATTTACCTCAA+CGG 0.575023 1_1:-48655136 Msa0025490:CDS
TGGACACGGGGTCTTAAAGA+TGG 0.577970 1_1:-48655450 Msa0025490:CDS
TTGGAGCGTGAATATATGCA+AGG 0.578663 1_1:-48655063 Msa0025490:CDS
ATGCTAGATTTGGTGAGACC+CGG 0.578871 1_1:-48655281 Msa0025490:CDS
GGCAAGTATACCTGGGCTAA+CGG 0.580636 1_1:-48655630 Msa0025490:CDS
TATATACTTCATCCTCTAGA+GGG 0.582725 1_1:+48650189 None:intergenic
CTTCGCCGATGGAAATAAAG+AGG 0.582727 1_1:-48655106 Msa0025490:CDS
CAAACTACTAACTGTGGCCA+CGG 0.585273 1_1:+48656100 None:intergenic
CAACAGCTACAAGACAAGAA+TGG 0.585911 1_1:+48656186 None:intergenic
GGCAACGTTCCCGAGGGTCA+GGG 0.586924 1_1:-48655927 Msa0025490:CDS
CACAGGATTATACCTTCAAG+TGG 0.587271 1_1:-48652158 Msa0025490:CDS
ATGATGGTAGTGTTGTTGTC+GGG 0.587597 1_1:-48650127 Msa0025490:CDS
CAAATCCAAATCTTTAAGAG+TGG 0.589290 1_1:+48651777 None:intergenic
TAGGTGTGAACATGCCAGCA+AGG 0.591715 1_1:-48649374 Msa0025490:CDS
TTCTTCTACCTGGTACTGCA+AGG 0.594688 1_1:-48650046 Msa0025490:intron
GAGACGAGAAGTTCGAGCAT+CGG 0.594986 1_1:-48653865 Msa0025490:CDS
CCTTCATACAACACACCAGA+AGG 0.602183 1_1:+48655822 None:intergenic
TTCAGCTGCTGGTGACGAGG+AGG 0.602690 1_1:-48650075 Msa0025490:CDS
CCAAAAGGACAAAGTTTCAA+GGG 0.603673 1_1:-48656240 Msa0025490:five_prime_UTR
ATAAAGTCAAGTGTTGTAGG+TGG 0.605120 1_1:+48657515 None:intergenic
TGGATCCAAGGAAATCCTGA+GGG 0.606779 1_1:-48655657 Msa0025490:CDS
TTATATACTTCATCCTCTAG+AGG 0.607130 1_1:+48650188 None:intergenic
TATATTCACGCTCCAAAATG+GGG 0.608393 1_1:+48655070 None:intergenic
AATAAAGACTCCCGCCAAGA+CGG 0.610613 1_1:+48651733 None:intergenic
ATTGACACCTCCTCATCAGT+CGG 0.612372 1_1:-48653790 Msa0025490:CDS
TGGAGCGTGAATATATGCAA+GGG 0.612966 1_1:-48655062 Msa0025490:CDS
TGAGAGAACTATCGTCTCCA+GGG 0.613070 1_1:-48653004 Msa0025490:CDS
GCAATATATCAATGATACCC+AGG 0.613082 1_1:+48649286 None:intergenic
CCAGAAAGTCTGACCTACAA+AGG 0.613083 1_1:-48655753 Msa0025490:CDS
GTCTGACCTACAAAGGTCGA+TGG 0.613814 1_1:-48655746 Msa0025490:CDS
TATGATGGTGAGTGGAGACG+GGG 0.614874 1_1:-48655876 Msa0025490:CDS
GTTGTGTATATGATGGTGAG+TGG 0.615250 1_1:-48655884 Msa0025490:CDS
AGGTGTGAACATGCCAGCAA+GGG 0.616410 1_1:-48649373 Msa0025490:CDS
CTGATGCTTAGTTTGCAGCT+CGG 0.616521 1_1:-48654904 Msa0025490:CDS
TCAAATGGCTAGGTATACTG+TGG 0.619000 1_1:-48653907 Msa0025490:intron
GTCTCCACTTACCCAGGTAA+GGG 0.619943 1_1:+48655557 None:intergenic
GCAAGGGGTATTAATAAGTG+AGG 0.622233 1_1:-48655046 Msa0025490:CDS
TGGTTTGGCAATGCTTGCAG+AGG 0.623080 1_1:-48651035 Msa0025490:CDS
TTAAAATCCTCCGACTGATG+AGG 0.624649 1_1:+48653780 None:intergenic
TACCATCATCTGCTCCCCGA+GGG 0.625035 1_1:+48650141 None:intergenic
GAAGTATATAACTATCCTCA+AGG 0.626789 1_1:-48650176 Msa0025490:CDS
TGGCGATTCAATCTTAAACA+TGG 0.628373 1_1:-48655726 Msa0025490:CDS
GGTCTTGGCGCATATACTTG+GGG 0.631149 1_1:-48655498 Msa0025490:CDS
TCTAAAACCAGCAATTTCAG+TGG 0.631528 1_1:+48656001 None:intergenic
ATGGATTTGGGAAAATACAA+TGG 0.632638 1_1:-48655845 Msa0025490:CDS
GGTGGGACAATGTCAGGCAA+AGG 0.633057 1_1:-48655582 Msa0025490:CDS
CTTCTCGGCAACGTTCCCGA+GGG 0.634639 1_1:-48655933 Msa0025490:CDS
GAGGTGGATCTTCTTCTACC+TGG 0.635208 1_1:-48650056 Msa0025490:CDS
AACTTCTCGTCTCTGTATGG+GGG 0.638602 1_1:+48653875 None:intergenic
AAATCCTCCGACTGATGAGG+AGG 0.639574 1_1:+48653783 None:intergenic
AAACGAGTCTCCACTTACCC+AGG 0.643861 1_1:+48655551 None:intergenic
TATGAAGGTGAATTCTCTGG+TGG 0.644862 1_1:-48655807 Msa0025490:CDS
ATGATGGTGAGTGGAGACGG+GGG 0.645871 1_1:-48655875 Msa0025490:CDS
TTGGATCCAAGGAAATCCTG+AGG 0.646382 1_1:-48655658 Msa0025490:CDS
ATTATGCATGTCTGGCTCCG+TGG 0.646691 1_1:-48656117 Msa0025490:exon
GCATCAGATCATAACTCCTG+TGG 0.647690 1_1:+48654920 None:intergenic
CGGGGTCTTAAAGATGGCAA+AGG 0.648365 1_1:-48655444 Msa0025490:CDS
GGTGAGACCCGGAGAACAGG+TGG 0.648651 1_1:-48655270 Msa0025490:CDS
TGGTTAAATGGTATGATGCA+TGG 0.651397 1_1:-48655519 Msa0025490:CDS
CAAATGGCTAGGTATACTGT+GGG 0.653802 1_1:-48653906 Msa0025490:intron
CTTGTCGGAAGAACGTCCAA+GGG 0.656049 1_1:+48651819 None:intergenic
ATCAACTACAGACCCTCTAG+AGG 0.656438 1_1:-48650201 Msa0025490:intron
AGAATGTTTCTCTTGAAAGG+CGG 0.656927 1_1:-48655197 Msa0025490:CDS
GGTCTTGTTCTGGTCCCTCG+GGG 0.658058 1_1:-48650155 Msa0025490:CDS
TTTCAACTTTCAATTCAACA+AGG 0.658064 1_1:-48657484 Msa0025490:intron
GGAGCGTGAATATATGCAAG+GGG 0.659260 1_1:-48655061 Msa0025490:CDS
TCAGATGGTTGTGTATATGA+TGG 0.660600 1_1:-48655891 Msa0025490:CDS
GGCGAAGACTGAATCCGTTG+AGG 0.662270 1_1:+48655122 None:intergenic
TATTTCCCATTACAACAAAG+CGG 0.665063 1_1:+48651893 None:intergenic
CTACCATCATCTGCTCCCCG+AGG 0.672666 1_1:+48650140 None:intergenic
TATGACGTCGTACTATACCT+GGG 0.673057 1_1:-48649303 Msa0025490:CDS
GACACCTCCTCATCAGTCGG+AGG 0.674116 1_1:-48653787 Msa0025490:CDS
AGGCAAAGGAACCCTTACCT+GGG 0.686161 1_1:-48655568 Msa0025490:CDS
GTACGACGTCATAAGCCTCG+TGG 0.687876 1_1:+48649313 None:intergenic
TCGATCCAAACTACTAACTG+TGG 0.690124 1_1:+48656094 None:intergenic
TGATTCGTTATCTATATCGG+CGG 0.703435 1_1:-48649211 Msa0025490:CDS
GGGGCCAGGCAAGTATACCT+GGG 0.703812 1_1:-48655637 Msa0025490:CDS
TCTGAACTTATACTAACAGG+AGG 0.705844 1_1:+48651058 None:intergenic
TATGTTGGGACATGGACACG+GGG 0.713292 1_1:-48655462 Msa0025490:CDS
GGGACCAGAACAAGACCTTG+AGG 0.724705 1_1:+48650161 None:intergenic
CAATATATGATCCTGTACCG+TGG 0.736323 1_1:+48655778 None:intergenic
GGATCCAAGGAAATCCTGAG+GGG 0.751805 1_1:-48655656 Msa0025490:CDS
GGAAACTCAAATGTTCCACG+AGG 0.778032 1_1:-48649328 Msa0025490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATATGATATGAAT+GGG - chr1_1:48650332-48650351 Msa0025490:intron 10.0%
!!! AAGAAAATAATTTTTTTGTT+TGG + chr1_1:48654703-48654722 None:intergenic 10.0%
!!! AATAAAATATTTTCTTACAA+TGG + chr1_1:48654998-48655017 None:intergenic 10.0%
!!! AAGAATATTTTCTTATATAT+AGG - chr1_1:48655217-48655236 Msa0025490:CDS 10.0%
!!! TTTAGTAATTTTTGTGTTAT+GGG - chr1_1:48649559-48649578 Msa0025490:intron 15.0%
!! CATTCATATCATATAAAAAA+AGG + chr1_1:48650333-48650352 None:intergenic 15.0%
!!! CTTTTTTTATATGATATGAA+TGG - chr1_1:48650331-48650350 Msa0025490:intron 15.0%
!!! TAATTAACTTGAATTGTTAA+TGG + chr1_1:48652320-48652339 None:intergenic 15.0%
!!! CTTATACTTTTTTTTTTCTT+CGG - chr1_1:48652397-48652416 Msa0025490:intron 15.0%
!! AAAAAGAAATAAAGTAGATT+TGG - chr1_1:48653428-48653447 Msa0025490:intron 15.0%
!!! TAAGAAAATATTTTATTCCT+AGG - chr1_1:48655001-48655020 Msa0025490:CDS 15.0%
!!! AAGAATCTTTTCTTATATAT+AGG + chr1_1:48655118-48655137 None:intergenic 15.0%
!! TTATTAAATTTGTACATTTG+AGG - chr1_1:48655255-48655274 Msa0025490:CDS 15.0%
!!! TGAACATGTAAAATATTTTA+AGG - chr1_1:48655322-48655341 Msa0025490:CDS 15.0%
!!! ATTTTGGATTTGTTTTATAT+TGG - chr1_1:48656189-48656208 Msa0025490:five_prime_UTR 15.0%
!! TATAATTGTAAAACTTTGAT+TGG + chr1_1:48656279-48656298 None:intergenic 15.0%
!! TTACAATTATATGATGATTA+TGG - chr1_1:48656288-48656307 Msa0025490:intron 15.0%
!!! ATCATTTTAGAAATTCTTAT+AGG - chr1_1:48656316-48656335 Msa0025490:intron 15.0%
!!! ACTTTTATGTTCATAAAATA+CGG - chr1_1:48656753-48656772 Msa0025490:intron 15.0%
!! AATTCTGAATAAAAATAATC+TGG + chr1_1:48657567-48657586 None:intergenic 15.0%
!!! TACTATTTCTAAATCAATTC+TGG - chr1_1:48649424-48649443 Msa0025490:intron 20.0%
!!! GTTTAGTAATTTTTGTGTTA+TGG - chr1_1:48649558-48649577 Msa0025490:intron 20.0%
!! TATATAAAAAACAGAGTAGT+CGG + chr1_1:48649731-48649750 None:intergenic 20.0%
!! CAATATAATCATACACAAAA+TGG + chr1_1:48649886-48649905 None:intergenic 20.0%
!!! TTATATTGTTTTTCTCCTTT+TGG - chr1_1:48649898-48649917 Msa0025490:intron 20.0%
!! AAAAAATCATAAGAACCAAA+AGG + chr1_1:48649916-48649935 None:intergenic 20.0%
!!! AGTTCAATTTCTTTTAGTTA+TGG - chr1_1:48649965-48649984 Msa0025490:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr1_1:48650044-48650063 Msa0025490:intron 20.0%
!! TTATAGAATTATAACTATCC+CGG + chr1_1:48650506-48650525 None:intergenic 20.0%
!! TGGTTAAAAAACAAATATAG+GGG + chr1_1:48652213-48652232 None:intergenic 20.0%
!! GTGGTTAAAAAACAAATATA+GGG + chr1_1:48652214-48652233 None:intergenic 20.0%
!! TGTGGTTAAAAAACAAATAT+AGG + chr1_1:48652215-48652234 None:intergenic 20.0%
!! AAATAGTATTTGTTTGCTTA+AGG + chr1_1:48652538-48652557 None:intergenic 20.0%
!!! ACTTAATTTCTTCTAAAGTT+TGG + chr1_1:48652673-48652692 None:intergenic 20.0%
!! TAGAAGAAATTAAGTTATTC+TGG - chr1_1:48652678-48652697 Msa0025490:intron 20.0%
!! TTCTGTAAGTAACTTAAAAA+TGG - chr1_1:48652728-48652747 Msa0025490:intron 20.0%
!! TCTGTAAGTAACTTAAAAAT+GGG - chr1_1:48652729-48652748 Msa0025490:intron 20.0%
!!! AGGTTAGTTTAAACTTTTTT+AGG - chr1_1:48652932-48652951 Msa0025490:CDS 20.0%
!! GGAAAATTATAGAAACAATA+TGG + chr1_1:48653146-48653165 None:intergenic 20.0%
!!! TAGAATTGTTTTTGTATACA+TGG - chr1_1:48653470-48653489 Msa0025490:intron 20.0%
!! ATATATAACAAGCATATGAA+AGG + chr1_1:48653549-48653568 None:intergenic 20.0%
!!! AATTTTCTATTCTAACTTCT+TGG + chr1_1:48654264-48654283 None:intergenic 20.0%
!!! AGATTTTTTGAATTAACTTG+TGG - chr1_1:48654297-48654316 Msa0025490:intron 20.0%
!!! CTTTTAAATCAAATCTTCTA+TGG + chr1_1:48654816-48654835 None:intergenic 20.0%
!!! CATAGAAGATTTGATTTAAA+AGG - chr1_1:48654814-48654833 Msa0025490:intron 20.0%
!!! TATTTTCTTATATATAGGAC+CGG - chr1_1:48655222-48655241 Msa0025490:CDS 20.0%
!! AAACTTGAAATTCAAACAAA+TGG + chr1_1:48655395-48655414 None:intergenic 20.0%
!! AATAAATGTCAATCACATAA+AGG + chr1_1:48655696-48655715 None:intergenic 20.0%
!!! ATAAAATGCTTTTGTGAAAA+AGG + chr1_1:48655937-48655956 None:intergenic 20.0%
!!! TAAGAATTTCTAAAATGATG+TGG + chr1_1:48656315-48656334 None:intergenic 20.0%
!! TAAACCAAATTATAGATAAC+CGG + chr1_1:48656347-48656366 None:intergenic 20.0%
!! TTGTTATAGCACTATAATTA+TGG - chr1_1:48656410-48656429 Msa0025490:intron 20.0%
!!! CTTTTATGTTCATAAAATAC+GGG - chr1_1:48656754-48656773 Msa0025490:intron 20.0%
!! ATATTCTAGCAACTATTTAA+TGG + chr1_1:48657211-48657230 None:intergenic 20.0%
!!! TTTTATTCAGAATTTGTGAA+CGG - chr1_1:48657573-48657592 Msa0025490:five_prime_UTR 20.0%
!! CTTGTTCTTTGTCTTTTATT+AGG + chr1_1:48648986-48649005 None:intergenic 25.0%
!! GTTTCGTTTTGTATTCTAAT+CGG + chr1_1:48649025-48649044 None:intergenic 25.0%
! TTTCAACTTTCAATTCAACA+AGG - chr1_1:48649177-48649196 Msa0025490:CDS 25.0%
!! TATTTCTAAATCAATTCTGG+AGG - chr1_1:48649427-48649446 Msa0025490:intron 25.0%
! TGCATTCACATTATATTGAT+CGG + chr1_1:48649507-48649526 None:intergenic 25.0%
! TTTGTTTGTTTCAATCATGA+CGG - chr1_1:48649634-48649653 Msa0025490:intron 25.0%
! TGTTCAATATAAAGACTTTC+AGG - chr1_1:48649829-48649848 Msa0025490:intron 25.0%
!!! TATAAAGACTTTCAGGTTTA+TGG - chr1_1:48649836-48649855 Msa0025490:intron 25.0%
! ATAATCATACACAAAATGGA+AGG + chr1_1:48649882-48649901 None:intergenic 25.0%
!!! TCAATTTCTTTTAGTTATGG+TGG - chr1_1:48649968-48649987 Msa0025490:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr1_1:48650019-48650038 None:intergenic 25.0%
! ATGATGATAGGAAAATAAGT+GGG + chr1_1:48650299-48650318 None:intergenic 25.0%
! GGGATAGTTATAATTCTATA+AGG - chr1_1:48650505-48650524 Msa0025490:intron 25.0%
! CGTTTGTCAATATAGATATA+GGG + chr1_1:48650625-48650644 None:intergenic 25.0%
! CCTATATCTATATTGACAAA+CGG - chr1_1:48650623-48650642 Msa0025490:intron 25.0%
! GTATATTTGGGAAATATGAA+AGG - chr1_1:48651058-48651077 Msa0025490:CDS 25.0%
! AAATTGCCAAAGATATCAAA+AGG - chr1_1:48651695-48651714 Msa0025490:intron 25.0%
!! TTCTTATGGGAATTTTCATA+TGG - chr1_1:48651959-48651978 Msa0025490:intron 25.0%
! AGAAATGTGGTTATTGAAAA+TGG - chr1_1:48652239-48652258 Msa0025490:CDS 25.0%
! GAAATGTGGTTATTGAAAAT+GGG - chr1_1:48652240-48652259 Msa0025490:CDS 25.0%
!! GCTTTGAATATCAGTAATTA+TGG - chr1_1:48652358-48652377 Msa0025490:intron 25.0%
!!! AATGGAATATCTTGCTTTTT+GGG + chr1_1:48652472-48652491 None:intergenic 25.0%
!!! AAATGGAATATCTTGCTTTT+TGG + chr1_1:48652473-48652492 None:intergenic 25.0%
! TATTCCATTTCATTTCCTAT+TGG - chr1_1:48652483-48652502 Msa0025490:intron 25.0%
! ATTCCATTTCATTTCCTATT+GGG - chr1_1:48652484-48652503 Msa0025490:intron 25.0%
! TTATTCCTATTAATGACATG+AGG - chr1_1:48652617-48652636 Msa0025490:intron 25.0%
!!! TTTGGTTCTTTCATTGTATA+TGG + chr1_1:48652646-48652665 None:intergenic 25.0%
!!! TATCAATATTTGCTTTTGCA+TGG - chr1_1:48652703-48652722 Msa0025490:intron 25.0%
!! AATTCAGTAGTTACTTTAAG+AGG + chr1_1:48653115-48653134 None:intergenic 25.0%
! TTTCTAATATCAGAACACTA+AGG + chr1_1:48653167-48653186 None:intergenic 25.0%
!!! TTGTTTTTGTATACATGGTA+AGG - chr1_1:48653475-48653494 Msa0025490:intron 25.0%
! TATTGATATACAAACTTCCT+TGG - chr1_1:48653805-48653824 Msa0025490:CDS 25.0%
!! TTCCATATTTCATTTTACCT+GGG - chr1_1:48653851-48653870 Msa0025490:CDS 25.0%
!! TTTTTCATATGTACATGATC+CGG - chr1_1:48654086-48654105 Msa0025490:intron 25.0%
! CATGAAGATGTAATAATGAT+AGG + chr1_1:48654680-48654699 None:intergenic 25.0%
! TAAATTACTTTGTTGAAGGA+GGG + chr1_1:48655051-48655070 None:intergenic 25.0%
!! GTTCTAAATTACTTTGTTGA+AGG + chr1_1:48655055-48655074 None:intergenic 25.0%
!! TCTTTTCTTATATATAGGAC+CGG + chr1_1:48655113-48655132 None:intergenic 25.0%
! ATTTAATAATATACTCCCTC+CGG + chr1_1:48655244-48655263 None:intergenic 25.0%
! GAAAGCTAATGTTTAGTAAT+TGG - chr1_1:48655670-48655689 Msa0025490:CDS 25.0%
! ATGTGATTGACATTTATTTC+TGG - chr1_1:48655698-48655717 Msa0025490:CDS 25.0%
!! GATATAAACACTGCTTATTT+TGG - chr1_1:48655821-48655840 Msa0025490:CDS 25.0%
!!! CTGCTTATTTTGGTATTATT+AGG - chr1_1:48655831-48655850 Msa0025490:CDS 25.0%
!! GATGTAAAAGAAAGATTTTC+TGG + chr1_1:48655890-48655909 None:intergenic 25.0%
! GATTGTTTATTAACATGAGA+TGG - chr1_1:48655974-48655993 Msa0025490:CDS 25.0%
!!! AAATGTTAGGAGCTATTTTT+AGG - chr1_1:48656030-48656049 Msa0025490:CDS 25.0%
!! TCTTATTATGTCTTGCATTT+TGG - chr1_1:48656173-48656192 Msa0025490:five_prime_UTR 25.0%
!!! TTTTTTCCTTCTAACTGAAA+CGG - chr1_1:48656213-48656232 Msa0025490:five_prime_UTR 25.0%
! TTATCCGGTTATCTATAATT+TGG - chr1_1:48656340-48656359 Msa0025490:intron 25.0%
! GTAATTCTTCATGAGTTTAA+TGG - chr1_1:48656637-48656656 Msa0025490:intron 25.0%
! ACATGTACACATTTAAAAGT+AGG + chr1_1:48657000-48657019 None:intergenic 25.0%
!! ACTTGGGATTATATTGATTA+AGG - chr1_1:48657164-48657183 Msa0025490:intron 25.0%
!! GTTTGATTCGTTATCTATAT+CGG - chr1_1:48657447-48657466 Msa0025490:intron 25.0%
CATCATCTTCTTCAATCTTT+AGG - chr1_1:48648960-48648979 Msa0025490:three_prime_UTR 30.0%
! AGAATAAAGTCAAGTGTTGT+AGG + chr1_1:48649152-48649171 None:intergenic 30.0%
ATATTTAGAGAGAGAAAGAG+AGG + chr1_1:48649211-48649230 None:intergenic 30.0%
TCGAATTTATTGTTCGAATC+AGG + chr1_1:48649375-48649394 None:intergenic 30.0%
TGGTCTGTCATATTTACAAT+CGG - chr1_1:48650139-48650158 Msa0025490:CDS 30.0%
GATGATGATAGGAAAATAAG+TGG + chr1_1:48650300-48650319 None:intergenic 30.0%
GCATAAACAAAGATGATGAT+AGG + chr1_1:48650311-48650330 None:intergenic 30.0%
! ACTTTTCTTTTGTAGCCAAA+AGG - chr1_1:48650406-48650425 Msa0025490:intron 30.0%
AGACATGCATAATGATCAAA+AGG + chr1_1:48650537-48650556 None:intergenic 30.0%
! TTTTGATCATTATGCATGTC+TGG - chr1_1:48650536-48650555 Msa0025490:intron 30.0%
CCGTTTGTCAATATAGATAT+AGG + chr1_1:48650626-48650645 None:intergenic 30.0%
!!! AAATTGCTGGTTTTAGAGTA+GGG - chr1_1:48650666-48650685 Msa0025490:intron 30.0%
ATGGATTTGGGAAAATACAA+TGG - chr1_1:48650816-48650835 Msa0025490:intron 30.0%
! TTGGATAAACTTGATAACCT+AGG + chr1_1:48650961-48650980 None:intergenic 30.0%
GGTTATCAAGTTTATCCAAA+TGG - chr1_1:48650962-48650981 Msa0025490:intron 30.0%
CCTTCAAATATATCTCCATT+TGG + chr1_1:48650980-48650999 None:intergenic 30.0%
CCAAATGGAGATATATTTGA+AGG - chr1_1:48650977-48650996 Msa0025490:intron 30.0%
GCTAACGGAAATGTATATTT+GGG - chr1_1:48651046-48651065 Msa0025490:CDS 30.0%
TATTTGGGAAATATGAAAGG+TGG - chr1_1:48651061-48651080 Msa0025490:CDS 30.0%
ATTTGGGAAATATGAAAGGT+GGG - chr1_1:48651062-48651081 Msa0025490:CDS 30.0%
! AAAGGAACCTTTTATCCAAA+AGG - chr1_1:48651235-48651254 Msa0025490:intron 30.0%
TCAATGCATTGAGAAAAAGA+GGG - chr1_1:48651290-48651309 Msa0025490:intron 30.0%
! TGATTCTGTTTTCTCAAATC+TGG + chr1_1:48651322-48651341 None:intergenic 30.0%
AGATTTGAGAAAACAGAATC+AGG - chr1_1:48651321-48651340 Msa0025490:intron 30.0%
TGATTCACAATTTACCTCAA+CGG - chr1_1:48651525-48651544 Msa0025490:intron 30.0%
! GTTAACCTCTTTATTTCCAT+CGG + chr1_1:48651563-48651582 None:intergenic 30.0%
ATATATTCACGCTCCAAAAT+GGG + chr1_1:48651595-48651614 None:intergenic 30.0%
!! CCTTTAATAATTTGTTCACC+GGG + chr1_1:48651721-48651740 None:intergenic 30.0%
!! GCCTTTAATAATTTGTTCAC+CGG + chr1_1:48651722-48651741 None:intergenic 30.0%
AACAAATTATTAAAGGCCAC+AGG - chr1_1:48651725-48651744 Msa0025490:intron 30.0%
TAAGGTAAAAGATACTGTCT+TGG - chr1_1:48651782-48651801 Msa0025490:CDS 30.0%
! AGGAGGTCATAATTTTCTTA+TGG - chr1_1:48651945-48651964 Msa0025490:intron 30.0%
! GGAGGTCATAATTTTCTTAT+GGG - chr1_1:48651946-48651965 Msa0025490:intron 30.0%
! TCAGACAGTTTTTATGTTCA+CGG - chr1_1:48652011-48652030 Msa0025490:intron 30.0%
!! ATTCTTTACAGTTGGTAACA+AGG + chr1_1:48652054-48652073 None:intergenic 30.0%
TACCAACTGTAAAGAATAGA+AGG - chr1_1:48652057-48652076 Msa0025490:intron 30.0%
ACCAACTGTAAAGAATAGAA+GGG - chr1_1:48652058-48652077 Msa0025490:intron 30.0%
AAAACCTCAATCTCTTTAAG+AGG + chr1_1:48652092-48652111 None:intergenic 30.0%
! CTTAAAGAGATTGAGGTTTT+AGG - chr1_1:48652092-48652111 Msa0025490:intron 30.0%
CAAAGCAAAATATAGCTCAA+AGG + chr1_1:48652140-48652159 None:intergenic 30.0%
AATCACTAAATTGTCACTCA+TGG - chr1_1:48652161-48652180 Msa0025490:CDS 30.0%
ATCACTAAATTGTCACTCAT+GGG - chr1_1:48652162-48652181 Msa0025490:CDS 30.0%
GGATTCAAGAAAAAAGAATG+TGG - chr1_1:48652183-48652202 Msa0025490:CDS 30.0%
TTAACCACAGAAAAGAAATG+TGG - chr1_1:48652226-48652245 Msa0025490:CDS 30.0%
! ATAACCACATTTCTTTTCTG+TGG + chr1_1:48652233-48652252 None:intergenic 30.0%
!!! ATGGAATATCTTGCTTTTTG+GGG + chr1_1:48652471-48652490 None:intergenic 30.0%
ATTCCCAATAGGAAATGAAA+TGG + chr1_1:48652490-48652509 None:intergenic 30.0%
TGTTATAGTAGAACTAACAC+AGG - chr1_1:48652581-48652600 Msa0025490:intron 30.0%
!! CTTCTAAAGTTTGGTACATT+TGG + chr1_1:48652664-48652683 None:intergenic 30.0%
! ACTTAAAAATGGGCTTCAAA+TGG - chr1_1:48652739-48652758 Msa0025490:intron 30.0%
! TGGATGAATTTTCCTAAAGA+AGG - chr1_1:48652842-48652861 Msa0025490:intron 30.0%
TGATTTAGTAAAGCAAGGAT+TGG + chr1_1:48653019-48653038 None:intergenic 30.0%
TGTAGTGATTTAGTAAAGCA+AGG + chr1_1:48653024-48653043 None:intergenic 30.0%
! GTAGGTATTGCAATTTGAAA+TGG + chr1_1:48653242-48653261 None:intergenic 30.0%
AATACCTACTTGACAACTTA+AGG - chr1_1:48653253-48653272 Msa0025490:intron 30.0%
ACTTAAGGTGAATACAAGAA+TGG - chr1_1:48653268-48653287 Msa0025490:intron 30.0%
AAGACATGTAGATTTCATGT+TGG - chr1_1:48653334-48653353 Msa0025490:intron 30.0%
!!! GTAAAGGTGTGTTTATTTTG+TGG - chr1_1:48653749-48653768 Msa0025490:intron 30.0%
! GTTCCATATTTCATTTTACC+TGG - chr1_1:48653850-48653869 Msa0025490:CDS 30.0%
! AAGTATGTCATTGATAACCA+AGG + chr1_1:48653892-48653911 None:intergenic 30.0%
TCAATGACATACTTGCAAAA+AGG - chr1_1:48653898-48653917 Msa0025490:CDS 30.0%
CAATGACATACTTGCAAAAA+GGG - chr1_1:48653899-48653918 Msa0025490:intron 30.0%
AATGACATACTTGCAAAAAG+GGG - chr1_1:48653900-48653919 Msa0025490:intron 30.0%
CGTAACTTATGTAAGAATGA+TGG + chr1_1:48654040-48654059 None:intergenic 30.0%
! TGCATTTAAGTTAATGAAGC+AGG + chr1_1:48654065-48654084 None:intergenic 30.0%
GAATATCATCCAAGTTAATG+AGG + chr1_1:48654193-48654212 None:intergenic 30.0%
AGAACCTACATTTCAGATTA+TGG + chr1_1:48654407-48654426 None:intergenic 30.0%
!!! ACACTCGTTACAAAGTTTTT+TGG - chr1_1:48654476-48654495 Msa0025490:intron 30.0%
TATTTCCCATTACAACAAAG+CGG + chr1_1:48654771-48654790 None:intergenic 30.0%
GAATACCACTCTTAAAGATT+TGG - chr1_1:48654879-48654898 Msa0025490:intron 30.0%
! CAAATCCAAATCTTTAAGAG+TGG + chr1_1:48654887-48654906 None:intergenic 30.0%
!! TTTGAACTACTGCTTTTACT+TGG - chr1_1:48654903-48654922 Msa0025490:CDS 30.0%
GGGAGTCTTTATTAAAGTAA+GGG - chr1_1:48654938-48654957 Msa0025490:CDS 30.0%
GGAGTCTTTATTAAAGTAAG+GGG - chr1_1:48654939-48654958 Msa0025490:CDS 30.0%
CTAAATTACTTTGTTGAAGG+AGG + chr1_1:48655052-48655071 None:intergenic 30.0%
TAGTATAAGTTCAGATGGTT+TGG - chr1_1:48655611-48655630 Msa0025490:CDS 30.0%
! TTGTGTGTTTTACCTAAAGT+TGG - chr1_1:48655732-48655751 Msa0025490:CDS 30.0%
CTAAAGTTGGCATATATCAT+CGG - chr1_1:48655745-48655764 Msa0025490:CDS 30.0%
! TTTTGTGAAAAAGGTCAGAT+GGG + chr1_1:48655928-48655947 None:intergenic 30.0%
TAACATGAGATGGATATGAA+TGG - chr1_1:48655984-48656003 Msa0025490:CDS 30.0%
ATTCCTGCTTGAAAAATGTT+AGG - chr1_1:48656017-48656036 Msa0025490:CDS 30.0%
AACCAATCAGCATGTTTAAT+TGG + chr1_1:48656121-48656140 None:intergenic 30.0%
! TTTTTCCTTCTAACTGAAAC+GGG - chr1_1:48656214-48656233 Msa0025490:five_prime_UTR 30.0%
GAAATTCTTATAGGCTTATC+CGG - chr1_1:48656325-48656344 Msa0025490:intron 30.0%
TATATACTTCATCCTCTAGA+GGG + chr1_1:48656475-48656494 None:intergenic 30.0%
TTATATACTTCATCCTCTAG+AGG + chr1_1:48656476-48656495 None:intergenic 30.0%
GAAGTATATAACTATCCTCA+AGG - chr1_1:48656485-48656504 Msa0025490:intron 30.0%
GCTATGATCACACTAATAAT+AGG + chr1_1:48656715-48656734 None:intergenic 30.0%
TTATGTTCATAAAATACGGG+CGG - chr1_1:48656757-48656776 Msa0025490:intron 30.0%
TAAATATACGAGAGCTTGAA+CGG + chr1_1:48656932-48656951 None:intergenic 30.0%
!!! ATTTTTTTCATGCAGAAGTG+TGG + chr1_1:48657074-48657093 None:intergenic 30.0%
! AACAATCTAGCTATTTCACT+TGG - chr1_1:48657147-48657166 Msa0025490:intron 30.0%
! ACAATCTAGCTATTTCACTT+GGG - chr1_1:48657148-48657167 Msa0025490:intron 30.0%
AACTATTTAATGGTGCACTA+CGG + chr1_1:48657201-48657220 None:intergenic 30.0%
TGCTAGAATATTATAGACTG+AGG - chr1_1:48657220-48657239 Msa0025490:intron 30.0%
GCTAGAATATTATAGACTGA+GGG - chr1_1:48657221-48657240 Msa0025490:intron 30.0%
AAGATTACAACATGACTAAG+AGG - chr1_1:48657398-48657417 Msa0025490:intron 30.0%
AAGTTACTCAAACTTTATCC+TGG + chr1_1:48657541-48657560 None:intergenic 30.0%
CAAAACGAAACGAAACTCAT+TGG - chr1_1:48649034-48649053 Msa0025490:three_prime_UTR 35.0%
! TAAAGTCAAGTGTTGTAGGT+GGG + chr1_1:48649148-48649167 None:intergenic 35.0%
! ATAAAGTCAAGTGTTGTAGG+TGG + chr1_1:48649149-48649168 None:intergenic 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr1_1:48650013-48650032 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr1_1:48650050-48650069 Msa0025490:CDS 35.0%
ACATCTATGAAGCACAGATA+CGG + chr1_1:48650117-48650136 None:intergenic 35.0%
TGTCATATTTACAATCGGCT+TGG - chr1_1:48650144-48650163 Msa0025490:CDS 35.0%
!! TATTTACAATCGGCTTGGTT+TGG - chr1_1:48650149-48650168 Msa0025490:CDS 35.0%
CCAAAAGGACAAAGTTTCAA+GGG - chr1_1:48650421-48650440 Msa0025490:intron 35.0%
! TCTAAAACCAGCAATTTCAG+TGG + chr1_1:48650663-48650682 None:intergenic 35.0%
!!! GAAATTGCTGGTTTTAGAGT+AGG - chr1_1:48650665-48650684 Msa0025490:intron 35.0%
!!! AATTGCTGGTTTTAGAGTAG+GGG - chr1_1:48650667-48650686 Msa0025490:intron 35.0%
TCAGATGGTTGTGTATATGA+TGG - chr1_1:48650770-48650789 Msa0025490:intron 35.0%
TTGTATGAAGGTGAATTCTC+TGG - chr1_1:48650851-48650870 Msa0025490:intron 35.0%
TGGCGATTCAATCTTAAACA+TGG - chr1_1:48650935-48650954 Msa0025490:intron 35.0%
TTCAATCTTAAACATGGCCT+AGG - chr1_1:48650941-48650960 Msa0025490:intron 35.0%
GAGATATATTTGAAGGCTCT+TGG - chr1_1:48650984-48651003 Msa0025490:intron 35.0%
GGCTAACGGAAATGTATATT+TGG - chr1_1:48651045-48651064 Msa0025490:CDS 35.0%
TTTGAAGGAAGCTGGTTAAA+TGG - chr1_1:48651130-48651149 Msa0025490:CDS 35.0%
TGGTTAAATGGTATGATGCA+TGG - chr1_1:48651142-48651161 Msa0025490:CDS 35.0%
! ACAGCTTCCTTTTGGATAAA+AGG + chr1_1:48651245-48651264 None:intergenic 35.0%
AGATATACTTCTTGTGCAGA+TGG + chr1_1:48651271-48651290 None:intergenic 35.0%
CTCAATGCATTGAGAAAAAG+AGG - chr1_1:48651289-48651308 Msa0025490:intron 35.0%
! TAACACTGCTTCAGTTGATA+TGG - chr1_1:48651354-48651373 Msa0025490:intron 35.0%
! AACACTGCTTCAGTTGATAT+GGG - chr1_1:48651355-48651374 Msa0025490:intron 35.0%
GATATGGGAAATGCTAGATT+TGG - chr1_1:48651370-48651389 Msa0025490:intron 35.0%
CACAGAAAACCTGTTAAATC+TGG - chr1_1:48651426-48651445 Msa0025490:intron 35.0%
GAGATTGATCCAGATTTAAC+AGG + chr1_1:48651438-48651457 None:intergenic 35.0%
GCAAGAATGTTTCTCTTGAA+AGG - chr1_1:48651461-48651480 Msa0025490:intron 35.0%
AGAATGTTTCTCTTGAAAGG+CGG - chr1_1:48651464-48651483 Msa0025490:intron 35.0%
GTAGCTATTGAGAAAGTGAT+TGG - chr1_1:48651499-48651518 Msa0025490:intron 35.0%
! TAACGAAAAGATCCCCATTT+TGG - chr1_1:48651579-48651598 Msa0025490:intron 35.0%
TATATTCACGCTCCAAAATG+GGG + chr1_1:48651594-48651613 None:intergenic 35.0%
CATATATTCACGCTCCAAAA+TGG + chr1_1:48651596-48651615 None:intergenic 35.0%
CCCGGTGAACAAATTATTAA+AGG - chr1_1:48651718-48651737 Msa0025490:intron 35.0%
CAAGATGAATCCATGTTAGA+AGG - chr1_1:48651925-48651944 Msa0025490:intron 35.0%
ATTATGACCTCCTTCTAACA+TGG + chr1_1:48651938-48651957 None:intergenic 35.0%
TCCCTTCTATTCTTTACAGT+TGG + chr1_1:48652062-48652081 None:intergenic 35.0%
AATGCCTCTTAAAGAGATTG+AGG - chr1_1:48652085-48652104 Msa0025490:intron 35.0%
!!! TGGAATATCTTGCTTTTTGG+GGG + chr1_1:48652470-48652489 None:intergenic 35.0%
! ATTCATCCAAAAGCTTGCTT+TGG + chr1_1:48652831-48652850 None:intergenic 35.0%
GTCAATTGAGAACCTTCTTT+AGG + chr1_1:48652857-48652876 None:intergenic 35.0%
! ATCAGTCGGAGGATTTTAAA+TGG - chr1_1:48652885-48652904 Msa0025490:intron 35.0%
AAACTAACCTGAACACCATA+GGG + chr1_1:48652922-48652941 None:intergenic 35.0%
TAAACTAACCTGAACACCAT+AGG + chr1_1:48652923-48652942 None:intergenic 35.0%
ATCACTACATGTCACTCTTA+TGG - chr1_1:48653035-48653054 Msa0025490:CDS 35.0%
TACATGTCACTCTTATGGAT+TGG - chr1_1:48653040-48653059 Msa0025490:CDS 35.0%
! TTCACCTTAAGTTGTCAAGT+AGG + chr1_1:48653260-48653279 None:intergenic 35.0%
CACATCACATCATACATTAG+AGG + chr1_1:48653384-48653403 None:intergenic 35.0%
AATTTCTGCAAAAGGTCACA+AGG + chr1_1:48653574-48653593 None:intergenic 35.0%
CTCTCTCAAATTTCTGCAAA+AGG + chr1_1:48653582-48653601 None:intergenic 35.0%
! CAAAGCATCATTTCCACAAA+TGG + chr1_1:48653639-48653658 None:intergenic 35.0%
! TAGTGTCTTTTTCTTGTCTC+AGG - chr1_1:48653688-48653707 Msa0025490:intron 35.0%
TCAGTGTCTTGATCATGAAA+CGG + chr1_1:48653718-48653737 None:intergenic 35.0%
ACTGAGAAGATCAGAAGTAA+AGG - chr1_1:48653733-48653752 Msa0025490:intron 35.0%
TGATATACAAACTTCCTTGG+AGG - chr1_1:48653808-48653827 Msa0025490:CDS 35.0%
CACCCAGGTAAAATGAAATA+TGG + chr1_1:48653856-48653875 None:intergenic 35.0%
TATTGTCTGCCTCATTAACT+TGG - chr1_1:48654181-48654200 Msa0025490:intron 35.0%
! GTGACCATAATCTGAAATGT+AGG - chr1_1:48654400-48654419 Msa0025490:intron 35.0%
!!! CAAAGTTTTTTGGTTTGCAC+AGG - chr1_1:48654486-48654505 Msa0025490:intron 35.0%
! GATAAACGAGCATTACCTTT+TGG + chr1_1:48654529-48654548 None:intergenic 35.0%
ATATGTTCTGCACAGAATTG+AGG - chr1_1:48654788-48654807 Msa0025490:intron 35.0%
GATTTAAAAGGTTCATCCCT+TGG - chr1_1:48654826-48654845 Msa0025490:intron 35.0%
!! CTCATCGATTTCTATCTTGT+CGG + chr1_1:48654860-48654879 None:intergenic 35.0%
CGGGAGTCTTTATTAAAGTA+AGG - chr1_1:48654937-48654956 Msa0025490:CDS 35.0%
! TTTTATTCCTAGGAACACAC+AGG - chr1_1:48655011-48655030 Msa0025490:CDS 35.0%
TTCTTATATATAGGACCGGA+GGG + chr1_1:48655226-48655245 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG + chr1_1:48655225-48655244 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG - chr1_1:48655225-48655244 Msa0025490:CDS 35.0%
TTCTTATATATAGGACCGGA+GGG - chr1_1:48655226-48655245 Msa0025490:CDS 35.0%
! ATGGACTATAGTCTTCTTCT+AGG - chr1_1:48655549-48655568 Msa0025490:CDS 35.0%
TCTGAACTTATACTAACAGG+AGG + chr1_1:48655606-48655625 None:intergenic 35.0%
CCATCTGAACTTATACTAAC+AGG + chr1_1:48655609-48655628 None:intergenic 35.0%
CCTGTTAGTATAAGTTCAGA+TGG - chr1_1:48655606-48655625 Msa0025490:CDS 35.0%
CGATGATATATGCCAACTTT+AGG + chr1_1:48655747-48655766 None:intergenic 35.0%
TTTAGATGATGAGATCTACG+AGG - chr1_1:48655857-48655876 Msa0025490:CDS 35.0%
TTAGATGATGAGATCTACGA+GGG - chr1_1:48655858-48655877 Msa0025490:CDS 35.0%
! CTTTTGTGAAAAAGGTCAGA+TGG + chr1_1:48655929-48655948 None:intergenic 35.0%
AGGACCAATGTTGTAAAATC+TGG - chr1_1:48656050-48656069 Msa0025490:CDS 35.0%
ATGTTTAATTGGACCAGCAA+AGG + chr1_1:48656110-48656129 None:intergenic 35.0%
GTCCAATTAAACATGCTGAT+TGG - chr1_1:48656116-48656135 Msa0025490:exon 35.0%
! ACAGTGCTGCTAAGTTAAAA+GGG + chr1_1:48656154-48656173 None:intergenic 35.0%
GAGCTCTTGAATTGAGTATT+CGG - chr1_1:48656242-48656261 Msa0025490:five_prime_UTR 35.0%
TCTTGAATTGAGTATTCGGT+TGG - chr1_1:48656246-48656265 Msa0025490:intron 35.0%
CACACTAATAATAGGATAGC+TGG + chr1_1:48656707-48656726 None:intergenic 35.0%
AGAGTAGTTTATGTTCTGCT+AGG - chr1_1:48656818-48656837 Msa0025490:intron 35.0%
GAGTAGTTTATGTTCTGCTA+GGG - chr1_1:48656819-48656838 Msa0025490:intron 35.0%
ACTATTTAATGGTGCACTAC+GGG + chr1_1:48657200-48657219 None:intergenic 35.0%
!! ATTTGAGTTTCCTCTTTTCC+TGG + chr1_1:48657325-48657344 None:intergenic 35.0%
GCAATATATCAATGATACCC+AGG + chr1_1:48657378-48657397 None:intergenic 35.0%
TGATTCGTTATCTATATCGG+CGG - chr1_1:48657450-48657469 Msa0025490:intron 35.0%
TTTATCCTGGCACATTTGAT+GGG + chr1_1:48657528-48657547 None:intergenic 35.0%
GGAAAACGAGTAGCGAAATT+TGG - chr1_1:48649055-48649074 Msa0025490:three_prime_UTR 40.0%
TAGTCAAAACCGAACCAAAC+TGG - chr1_1:48650242-48650261 Msa0025490:intron 40.0%
GGGCTTCATAGACTAAAGTA+CGG + chr1_1:48650279-48650298 None:intergenic 40.0%
GCCAAAAGGACAAAGTTTCA+AGG - chr1_1:48650420-48650439 Msa0025490:intron 40.0%
! CCCTTGAAACTTTGTCCTTT+TGG + chr1_1:48650424-48650443 None:intergenic 40.0%
AGTTTCAAGGGTCAATCACT+TGG - chr1_1:48650433-48650452 Msa0025490:intron 40.0%
AGACAAGAATGGTTGCAGAT+AGG + chr1_1:48650467-48650486 None:intergenic 40.0%
CAACAGCTACAAGACAAGAA+TGG + chr1_1:48650478-48650497 None:intergenic 40.0%
TCTTGTAGCTGTTGAGAATC+CGG - chr1_1:48650484-48650503 Msa0025490:intron 40.0%
TCGATCCAAACTACTAACTG+TGG + chr1_1:48650570-48650589 None:intergenic 40.0%
GGTAAGTATGTATGGTCAGA+TGG - chr1_1:48650755-48650774 Msa0025490:intron 40.0%
! GTTGTGTATATGATGGTGAG+TGG - chr1_1:48650777-48650796 Msa0025490:intron 40.0%
! TATATGATGGTGAGTGGAGA+CGG - chr1_1:48650783-48650802 Msa0025490:intron 40.0%
TATGAAGGTGAATTCTCTGG+TGG - chr1_1:48650854-48650873 Msa0025490:intron 40.0%
CAATATATGATCCTGTACCG+TGG + chr1_1:48650886-48650905 None:intergenic 40.0%
CACGGTACAGGATCATATAT+TGG - chr1_1:48650884-48650903 Msa0025490:intron 40.0%
CTTTGTAGGTCAGACTTTCT+GGG + chr1_1:48650910-48650929 None:intergenic 40.0%
ATATACATTTCCGTTAGCCC+AGG + chr1_1:48651044-48651063 None:intergenic 40.0%
AATGGTATGATGCATGGTCT+TGG - chr1_1:48651148-48651167 Msa0025490:CDS 40.0%
TTGGAGCGTGAATATATGCA+AGG - chr1_1:48651598-48651617 Msa0025490:intron 40.0%
TGGAGCGTGAATATATGCAA+GGG - chr1_1:48651599-48651618 Msa0025490:intron 40.0%
!! GCAAGGGGTATTAATAAGTG+AGG - chr1_1:48651615-48651634 Msa0025490:intron 40.0%
!! TTAGTTTGCAGCTCGGAATA+AGG - chr1_1:48651764-48651783 Msa0025490:CDS 40.0%
GATGAATCCATGTTAGAAGG+AGG - chr1_1:48651928-48651947 Msa0025490:intron 40.0%
!!! TCTTGCTTTTTGGGGGAAAA+AGG + chr1_1:48652463-48652482 None:intergenic 40.0%
GTTGCTATGTGATTCCCAAT+AGG + chr1_1:48652501-48652520 None:intergenic 40.0%
ATTGGGAATCACATAGCAAC+CGG - chr1_1:48652501-48652520 Msa0025490:intron 40.0%
GGTTGCCTCATGTCATTAAT+AGG + chr1_1:48652625-48652644 None:intergenic 40.0%
! AAAATGGGCTTCAAATGGCT+AGG - chr1_1:48652744-48652763 Msa0025490:intron 40.0%
TCAAATGGCTAGGTATACTG+TGG - chr1_1:48652754-48652773 Msa0025490:intron 40.0%
CAAATGGCTAGGTATACTGT+GGG - chr1_1:48652755-48652774 Msa0025490:intron 40.0%
TTAAAATCCTCCGACTGATG+AGG + chr1_1:48652884-48652903 None:intergenic 40.0%
ATGGAAAGATTACTGCCCTA+TGG - chr1_1:48652904-48652923 Msa0025490:intron 40.0%
AATAGACGAGAGCAAAACAG+AGG + chr1_1:48653515-48653534 None:intergenic 40.0%
GACTACATGATGTCCATTTG+TGG - chr1_1:48653623-48653642 Msa0025490:intron 40.0%
! TCATTGATAACCAAGGACCA+TGG + chr1_1:48653885-48653904 None:intergenic 40.0%
ACACACACACACATATCAAG+AGG - chr1_1:48654123-48654142 Msa0025490:intron 40.0%
AGGTCTTTGCAGACAGAAAT+AGG - chr1_1:48654143-48654162 Msa0025490:intron 40.0%
CACAGGATTATACCTTCAAG+TGG - chr1_1:48654503-48654522 Msa0025490:intron 40.0%
TATACCTTCAAGTGGCCAAA+AGG - chr1_1:48654511-48654530 Msa0025490:intron 40.0%
! ATTACCTTTTGGCCACTTGA+AGG + chr1_1:48654518-48654537 None:intergenic 40.0%
! CAGTTCCGCTTTGTTGTAAT+GGG - chr1_1:48654763-48654782 Msa0025490:intron 40.0%
GATATGTATTGTACTCCCTC+CGG - chr1_1:48655091-48655110 Msa0025490:CDS 40.0%
!!! GTTTTGAAGTTGAGCATTGC+AGG + chr1_1:48655452-48655471 None:intergenic 40.0%
! TGCACAAGAGTACGAGTAAA+AGG + chr1_1:48655485-48655504 None:intergenic 40.0%
! TTTTACTCGTACTCTTGTGC+AGG - chr1_1:48655484-48655503 Msa0025490:CDS 40.0%
TAGATGATGAGATCTACGAG+GGG - chr1_1:48655859-48655878 Msa0025490:CDS 40.0%
!!! GCTCCTAACATTTTTCAAGC+AGG + chr1_1:48656023-48656042 None:intergenic 40.0%
! CAGGCCAGATTTTACAACAT+TGG + chr1_1:48656057-48656076 None:intergenic 40.0%
CAATGTTGTAAAATCTGGCC+TGG - chr1_1:48656055-48656074 Msa0025490:CDS 40.0%
! GACAGTGCTGCTAAGTTAAA+AGG + chr1_1:48656155-48656174 None:intergenic 40.0%
ATTTGCCCGTTTCAGTTAGA+AGG + chr1_1:48656222-48656241 None:intergenic 40.0%
! GATGATGGTAGTGTTGTTGT+CGG - chr1_1:48656533-48656552 Msa0025490:intron 40.0%
! ATGATGGTAGTGTTGTTGTC+GGG - chr1_1:48656534-48656553 Msa0025490:intron 40.0%
AAGAATTACCTTGCAGTACC+AGG + chr1_1:48656626-48656645 None:intergenic 40.0%
TAAACTACTCTCCCAACAAC+TGG + chr1_1:48656809-48656828 None:intergenic 40.0%
TGAACGGCAAAAATCTATGG+AGG + chr1_1:48656916-48656935 None:intergenic 40.0%
GCTTGAACGGCAAAAATCTA+TGG + chr1_1:48656919-48656938 None:intergenic 40.0%
CAACTAGTGTTAGGAGTTAG+AGG + chr1_1:48656973-48656992 None:intergenic 40.0%
TGCAGACTTCAAATCCAGTT+AGG - chr1_1:48657268-48657287 Msa0025490:intron 40.0%
TTATGACGTCGTACTATACC+TGG - chr1_1:48657357-48657376 Msa0025490:intron 40.0%
TATGACGTCGTACTATACCT+GGG - chr1_1:48657358-48657377 Msa0025490:intron 40.0%
ACACTCTCTGGATAAAATCC+AGG + chr1_1:48657504-48657523 None:intergenic 40.0%
CTTTATCCTGGCACATTTGA+TGG + chr1_1:48657529-48657548 None:intergenic 40.0%
CAAAGCATGCATGCACAAAA+GGG + chr1_1:48657608-48657627 None:intergenic 40.0%
ACAAAGCATGCATGCACAAA+AGG + chr1_1:48657609-48657628 None:intergenic 40.0%
! TTGCTTGCTGGCTATAGTCT+AGG + chr1_1:48649099-48649118 None:intergenic 45.0%
TATGGGCGATGAAATTGAGC+TGG - chr1_1:48649576-48649595 Msa0025490:intron 45.0%
!! ATATGTGTCGGTGTCGGATA+CGG + chr1_1:48650007-48650026 None:intergenic 45.0%
ATGAAGCACAGATACGGACA+CGG + chr1_1:48650111-48650130 None:intergenic 45.0%
TCTGTGCTTCATAGATGTCG+TGG - chr1_1:48650119-48650138 Msa0025490:CDS 45.0%
CTATTGCGATCAAAAGCCCA+CGG + chr1_1:48650219-48650238 None:intergenic 45.0%
ACTAAAGTACGGCTGTTCGT+GGG + chr1_1:48650268-48650287 None:intergenic 45.0%
CTTGTAGCTGTTGAGAATCC+GGG - chr1_1:48650485-48650504 Msa0025490:intron 45.0%
CAAACTACTAACTGTGGCCA+CGG + chr1_1:48650564-48650583 None:intergenic 45.0%
ATATTGACAAACGGCGAAGC+TGG - chr1_1:48650632-48650651 Msa0025490:intron 45.0%
GGTCATTCCACTGAAATTGC+TGG - chr1_1:48650653-48650672 Msa0025490:intron 45.0%
CCTAATGGCGAGTCATATTC+CGG - chr1_1:48650701-48650720 Msa0025490:intron 45.0%
TCATATTCCGGATCCCTTCT+CGG - chr1_1:48650713-48650732 Msa0025490:intron 45.0%
TACATACTTACCCTGACCCT+CGG + chr1_1:48650747-48650766 None:intergenic 45.0%
AGGGTCAGGGTAAGTATGTA+TGG - chr1_1:48650747-48650766 Msa0025490:intron 45.0%
! ATATGATGGTGAGTGGAGAC+GGG - chr1_1:48650784-48650803 Msa0025490:intron 45.0%
GGGAAAATACAATGGCCTTC+TGG - chr1_1:48650824-48650843 Msa0025490:intron 45.0%
CCTTCATACAACACACCAGA+AGG + chr1_1:48650842-48650861 None:intergenic 45.0%
CCTTCTGGTGTGTTGTATGA+AGG - chr1_1:48650839-48650858 Msa0025490:intron 45.0%
TTCTCTGGTGGCTATATCCA+CGG - chr1_1:48650866-48650885 Msa0025490:intron 45.0%
CCTTTGTAGGTCAGACTTTC+TGG + chr1_1:48650911-48650930 None:intergenic 45.0%
CCAGAAAGTCTGACCTACAA+AGG - chr1_1:48650908-48650927 Msa0025490:intron 45.0%
TTTGAAGGCTCTTGGATCCA+AGG - chr1_1:48650992-48651011 Msa0025490:intron 45.0%
TTGGATCCAAGGAAATCCTG+AGG - chr1_1:48651003-48651022 Msa0025490:intron 45.0%
TGGATCCAAGGAAATCCTGA+GGG - chr1_1:48651004-48651023 Msa0025490:intron 45.0%
ATGAAAGGTGGGACAATGTC+AGG - chr1_1:48651073-48651092 Msa0025490:CDS 45.0%
GTAAGTGGAGACTCGTTTGA+AGG - chr1_1:48651115-48651134 Msa0025490:CDS 45.0%
! ATGGTCTTGGCGCATATACT+TGG - chr1_1:48651161-48651180 Msa0025490:intron 45.0%
! TGGTCTTGGCGCATATACTT+GGG - chr1_1:48651162-48651181 Msa0025490:intron 45.0%
!! ATGCTAGATTTGGTGAGACC+CGG - chr1_1:48651380-48651399 Msa0025490:intron 45.0%
! AACAGGTTTTCTGTGCCAGA+CGG + chr1_1:48651421-48651440 None:intergenic 45.0%
ATGTTTCTCTTGAAAGGCGG+TGG - chr1_1:48651467-48651486 Msa0025490:intron 45.0%
CTTCGCCGATGGAAATAAAG+AGG - chr1_1:48651555-48651574 Msa0025490:intron 45.0%
GGAGCGTGAATATATGCAAG+GGG - chr1_1:48651600-48651619 Msa0025490:intron 45.0%
GCCAAAGATATCAAAAGGCC+CGG - chr1_1:48651700-48651719 Msa0025490:intron 45.0%
! ACCGGGCCTTTTGATATCTT+TGG + chr1_1:48651704-48651723 None:intergenic 45.0%
GCATCAGATCATAACTCCTG+TGG + chr1_1:48651744-48651763 None:intergenic 45.0%
!! CTGATGCTTAGTTTGCAGCT+CGG - chr1_1:48651757-48651776 Msa0025490:CDS 45.0%
AACTTCTCGTCTCTGTATGG+GGG + chr1_1:48652789-48652808 None:intergenic 45.0%
GAACTTCTCGTCTCTGTATG+GGG + chr1_1:48652790-48652809 None:intergenic 45.0%
CGAACTTCTCGTCTCTGTAT+GGG + chr1_1:48652791-48652810 None:intergenic 45.0%
TCGAACTTCTCGTCTCTGTA+TGG + chr1_1:48652792-48652811 None:intergenic 45.0%
!!! GAAGTTCGAGCATCGGATTT+TGG - chr1_1:48652803-48652822 Msa0025490:intron 45.0%
!!! TTGGTGCCAAAGCAAGCTTT+TGG - chr1_1:48652822-48652841 Msa0025490:intron 45.0%
ATTGACACCTCCTCATCAGT+CGG - chr1_1:48652871-48652890 Msa0025490:intron 45.0%
ATTACTGCCCTATGGTGTTC+AGG - chr1_1:48652912-48652931 Msa0025490:intron 45.0%
!! ATGGATTGGTTGACAGCATC+AGG - chr1_1:48653054-48653073 Msa0025490:CDS 45.0%
TTGAGAGAACTATCGTCTCC+AGG - chr1_1:48653656-48653675 Msa0025490:intron 45.0%
TGAGAGAACTATCGTCTCCA+GGG - chr1_1:48653657-48653676 Msa0025490:intron 45.0%
!! AAGACACTACCACTTTTCCC+TGG + chr1_1:48653677-48653696 None:intergenic 45.0%
CAGTTGAAAACAAGCCTCCA+AGG + chr1_1:48653825-48653844 None:intergenic 45.0%
!! CTTGGAGGCTTGTTTTCAAC+TGG - chr1_1:48653823-48653842 Msa0025490:CDS 45.0%
! TTACCTGGGTGTTTTCTCCA+TGG - chr1_1:48653865-48653884 Msa0025490:CDS 45.0%
TGTGTGTGTGTAGGTACATC+CGG + chr1_1:48654108-48654127 None:intergenic 45.0%
ATGTGTGTGTGTGTGTGTGT+AGG + chr1_1:48654117-48654136 None:intergenic 45.0%
! GCAGTTCCGCTTTGTTGTAA+TGG - chr1_1:48654762-48654781 Msa0025490:intron 45.0%
AATAAAGACTCCCGCCAAGA+CGG + chr1_1:48654931-48654950 None:intergenic 45.0%
TCTTTCTCCTGTGTGTTCCT+AGG + chr1_1:48655021-48655040 None:intergenic 45.0%
TGAGACTGACAGCAAGTTCT+TGG - chr1_1:48655512-48655531 Msa0025490:CDS 45.0%
CTTGGAGGAACAGCACATAA+TGG - chr1_1:48655530-48655549 Msa0025490:CDS 45.0%
AGATGATGAGATCTACGAGG+GGG - chr1_1:48655860-48655879 Msa0025490:CDS 45.0%
TGTAAAATCTGGCCTGGACT+TGG - chr1_1:48656061-48656080 Msa0025490:CDS 45.0%
! AAAGGACCTGGCTATCCTTT+TGG + chr1_1:48656092-48656111 None:intergenic 45.0%
ATCAACTACAGACCCTCTAG+AGG - chr1_1:48656460-48656479 Msa0025490:intron 45.0%
!! CTATCCTCAAGGTCTTGTTC+TGG - chr1_1:48656496-48656515 Msa0025490:intron 45.0%
TTCTTCTACCTGGTACTGCA+AGG - chr1_1:48656615-48656634 Msa0025490:intron 45.0%
TGGTGCAATACTCCAGTTGT+TGG - chr1_1:48656794-48656813 Msa0025490:intron 45.0%
GGTGCAATACTCCAGTTGTT+GGG - chr1_1:48656795-48656814 Msa0025490:intron 45.0%
GTGTTAGGAGTTAGAGGATG+TGG + chr1_1:48656967-48656986 None:intergenic 45.0%
! GTAGGAGTGCAACTAGTGTT+AGG + chr1_1:48656982-48657001 None:intergenic 45.0%
! CAGAAGTGTGGTGCAATCAT+TGG + chr1_1:48657062-48657081 None:intergenic 45.0%
AGAGCAGATACCAGGAAAAG+AGG - chr1_1:48657312-48657331 Msa0025490:intron 45.0%
GGAAACTCAAATGTTCCACG+AGG - chr1_1:48657333-48657352 Msa0025490:intron 45.0%
TTCGTTATCTATATCGGCGG+TGG - chr1_1:48657453-48657472 Msa0025490:intron 45.0%
AAGCGACGAGAGTAGAATGT+AGG + chr1_1:48657481-48657500 None:intergenic 45.0%
CATTTGATGGGAACACTCTC+TGG + chr1_1:48657516-48657535 None:intergenic 45.0%
TCTCAACGCTCTTTGCTTGC+TGG + chr1_1:48649111-48649130 None:intergenic 50.0%
TCGGTGTGTCAGTGTTTGTG+TGG - chr1_1:48650069-48650088 Msa0025490:CDS 50.0%
GACTAAAGTACGGCTGTTCG+TGG + chr1_1:48650269-48650288 None:intergenic 50.0%
! ATTATGCATGTCTGGCTCCG+TGG - chr1_1:48650544-48650563 Msa0025490:intron 50.0%
CGTGGCCACAGTTAGTAGTT+TGG - chr1_1:48650562-48650581 Msa0025490:intron 50.0%
GGGGAACTCTCTCTTCCTAA+TGG - chr1_1:48650686-48650705 Msa0025490:intron 50.0%
CCGGAATATGACTCGCCATT+AGG + chr1_1:48650704-48650723 None:intergenic 50.0%
ACATACTTACCCTGACCCTC+GGG + chr1_1:48650746-48650765 None:intergenic 50.0%
! TATGATGGTGAGTGGAGACG+GGG - chr1_1:48650785-48650804 Msa0025490:intron 50.0%
! GGGGGATGAGGAATGGATTT+GGG - chr1_1:48650804-48650823 Msa0025490:intron 50.0%
GTCTGACCTACAAAGGTCGA+TGG - chr1_1:48650915-48650934 Msa0025490:intron 50.0%
GAATCGCCATCGACCTTTGT+AGG + chr1_1:48650924-48650943 None:intergenic 50.0%
GGATCCAAGGAAATCCTGAG+GGG - chr1_1:48651005-48651024 Msa0025490:intron 50.0%
TTAGCCCAGGTATACTTGCC+TGG + chr1_1:48651031-48651050 None:intergenic 50.0%
GGCAAGTATACCTGGGCTAA+CGG - chr1_1:48651031-48651050 Msa0025490:intron 50.0%
AGGCAAAGGAACCCTTACCT+GGG - chr1_1:48651093-48651112 Msa0025490:CDS 50.0%
GTCTCCACTTACCCAGGTAA+GGG + chr1_1:48651107-48651126 None:intergenic 50.0%
AGTCTCCACTTACCCAGGTA+AGG + chr1_1:48651108-48651127 None:intergenic 50.0%
AAACGAGTCTCCACTTACCC+AGG + chr1_1:48651113-48651132 None:intergenic 50.0%
GAGACTCGTTTGAAGGAAGC+TGG - chr1_1:48651122-48651141 Msa0025490:CDS 50.0%
GGTCTTGGCGCATATACTTG+GGG - chr1_1:48651163-48651182 Msa0025490:intron 50.0%
GCGCATATACTTGGGGTGAT+GGG - chr1_1:48651170-48651189 Msa0025490:intron 50.0%
CGCATATACTTGGGGTGATG+GGG - chr1_1:48651171-48651190 Msa0025490:intron 50.0%
! GCATATACTTGGGGTGATGG+GGG - chr1_1:48651172-48651191 Msa0025490:intron 50.0%
!! CATATACTTGGGGTGATGGG+GGG - chr1_1:48651173-48651192 Msa0025490:intron 50.0%
GCTATGTTGGGACATGGACA+CGG - chr1_1:48651197-48651216 Msa0025490:intron 50.0%
CTATGTTGGGACATGGACAC+GGG - chr1_1:48651198-48651217 Msa0025490:intron 50.0%
TATGTTGGGACATGGACACG+GGG - chr1_1:48651199-48651218 Msa0025490:intron 50.0%
TGGACACGGGGTCTTAAAGA+TGG - chr1_1:48651211-48651230 Msa0025490:intron 50.0%
CGGGGTCTTAAAGATGGCAA+AGG - chr1_1:48651217-48651236 Msa0025490:intron 50.0%
! GATGGCAGACAGCTTCCTTT+TGG + chr1_1:48651253-48651272 None:intergenic 50.0%
TGAAAGGCGGTGGAGTTTAG+AGG - chr1_1:48651477-48651496 Msa0025490:intron 50.0%
GCTTAAGGCAACGCATCTTC+CGG + chr1_1:48652523-48652542 None:intergenic 50.0%
GAGACGAGAAGTTCGAGCAT+CGG - chr1_1:48652796-48652815 Msa0025490:intron 50.0%
AAATCCTCCGACTGATGAGG+AGG + chr1_1:48652881-48652900 None:intergenic 50.0%
!! GCCTCATTCATCGACTCAGT+AGG - chr1_1:48652980-48652999 Msa0025490:CDS 50.0%
GCCTACTGAGTCGATGAATG+AGG + chr1_1:48652984-48653003 None:intergenic 50.0%
CTATCGTCTCCAGGGAAAAG+TGG - chr1_1:48653665-48653684 Msa0025490:intron 50.0%
! GGTGTTTTCTCCATGGTCCT+TGG - chr1_1:48653872-48653891 Msa0025490:CDS 50.0%
CTTGTCGGAAGAACGTCCAA+GGG + chr1_1:48654845-48654864 None:intergenic 50.0%
TCTTGTCGGAAGAACGTCCA+AGG + chr1_1:48654846-48654865 None:intergenic 50.0%
! GCTTTTACTTGGAGCCGTCT+TGG - chr1_1:48654914-48654933 Msa0025490:CDS 50.0%
TTTACTTGGAGCCGTCTTGG+CGG - chr1_1:48654917-48654936 Msa0025490:CDS 50.0%
GACTGACAGCAAGTTCTTGG+AGG - chr1_1:48655515-48655534 Msa0025490:CDS 50.0%
! TGGTTTGGCAATGCTTGCAG+AGG - chr1_1:48655626-48655645 Msa0025490:CDS 50.0%
TTGGCAATGCTTGCAGAGGA+AGG - chr1_1:48655630-48655649 Msa0025490:CDS 50.0%
AAATCTGGCCTGGACTTGGA+TGG - chr1_1:48656065-48656084 Msa0025490:CDS 50.0%
! CTTTTGGACCATCCAAGTCC+AGG + chr1_1:48656076-48656095 None:intergenic 50.0%
CTGGACTTGGATGGTCCAAA+AGG - chr1_1:48656074-48656093 Msa0025490:CDS 50.0%
GATGGTCCAAAAGGATAGCC+AGG - chr1_1:48656083-48656102 Msa0025490:CDS 50.0%
AATTGGACCAGCAAAGGACC+TGG + chr1_1:48656104-48656123 None:intergenic 50.0%
!! AAGGTCTTGTTCTGGTCCCT+CGG - chr1_1:48656504-48656523 Msa0025490:intron 50.0%
GTTGTCGGGTCACACATTAG+AGG - chr1_1:48656548-48656567 Msa0025490:intron 50.0%
GAGGTGGATCTTCTTCTACC+TGG - chr1_1:48656605-48656624 Msa0025490:intron 50.0%
! AAAATACGGGCGGCTGTTTC+TGG - chr1_1:48656767-48656786 Msa0025490:intron 50.0%
CTGGCATGTTCACACCTAAC+TGG + chr1_1:48657285-48657304 None:intergenic 50.0%
TAGGTGTGAACATGCCAGCA+AGG - chr1_1:48657287-48657306 Msa0025490:intron 50.0%
AGGTGTGAACATGCCAGCAA+GGG - chr1_1:48657288-48657307 Msa0025490:intron 50.0%
ATTCTACTCTCGTCGCTTCC+TGG - chr1_1:48657483-48657502 Msa0025490:intron 50.0%
GTGTTCCCATCAAATGTGCC+AGG - chr1_1:48657520-48657539 Msa0025490:five_prime_UTR 50.0%
CACAGATACGGACACGGACA+CGG + chr1_1:48650105-48650124 None:intergenic 55.0%
! AAAAGCCCACGGCTTGGGTT+GGG + chr1_1:48650208-48650227 None:intergenic 55.0%
CGATCAAAAGCCCACGGCTT+GGG + chr1_1:48650213-48650232 None:intergenic 55.0%
GTTCGTGGGCCAGTTTGGTT+CGG + chr1_1:48650254-48650273 None:intergenic 55.0%
AACGTTGCCGAGAAGGGATC+CGG + chr1_1:48650723-48650742 None:intergenic 55.0%
! ATGATGGTGAGTGGAGACGG+GGG - chr1_1:48650786-48650805 Msa0025490:intron 55.0%
! CGGGGGATGAGGAATGGATT+TGG - chr1_1:48650803-48650822 Msa0025490:intron 55.0%
GGTGGCTATATCCACGGTAC+AGG - chr1_1:48650872-48650891 Msa0025490:intron 55.0%
GGTGGGACAATGTCAGGCAA+AGG - chr1_1:48651079-48651098 Msa0025490:CDS 55.0%
CAGGCAAAGGAACCCTTACC+TGG - chr1_1:48651092-48651111 Msa0025490:CDS 55.0%
GGAACCCTTACCTGGGTAAG+TGG - chr1_1:48651100-48651119 Msa0025490:CDS 55.0%
GGCGCATATACTTGGGGTGA+TGG - chr1_1:48651169-48651188 Msa0025490:intron 55.0%
!! GTGATGGGGGGTGCTATGTT+GGG - chr1_1:48651185-48651204 Msa0025490:intron 55.0%
TTTGGTGAGACCCGGAGAAC+AGG - chr1_1:48651388-48651407 Msa0025490:intron 55.0%
ACGGAACACCACCTGTTCTC+CGG + chr1_1:48651402-48651421 None:intergenic 55.0%
AGAACAGGTGGTGTTCCGTC+TGG - chr1_1:48651403-48651422 Msa0025490:intron 55.0%
GGCGAAGACTGAATCCGTTG+AGG + chr1_1:48651542-48651561 None:intergenic 55.0%
ACGGATTCAGTCTTCGCCGA+TGG - chr1_1:48651544-48651563 Msa0025490:intron 55.0%
GGACCATGGAGAAAACACCC+AGG + chr1_1:48653871-48653890 None:intergenic 55.0%
TTACTTGGAGCCGTCTTGGC+GGG - chr1_1:48654918-48654937 Msa0025490:CDS 55.0%
AGGATAGCCAGGTCCTTTGC+TGG - chr1_1:48656094-48656113 Msa0025490:CDS 55.0%
GGGACCAGAACAAGACCTTG+AGG + chr1_1:48656503-48656522 None:intergenic 55.0%
!! AGGTCTTGTTCTGGTCCCTC+GGG - chr1_1:48656505-48656524 Msa0025490:intron 55.0%
TACCATCATCTGCTCCCCGA+GGG + chr1_1:48656523-48656542 None:intergenic 55.0%
CAGCAGCTGAAGCTCGCAAT+CGG + chr1_1:48656577-48656596 None:intergenic 55.0%
GTACGACGTCATAAGCCTCG+TGG + chr1_1:48657351-48657370 None:intergenic 55.0%
ACGGACACGGACACGGACAT+CGG + chr1_1:48650098-48650117 None:intergenic 60.0%
ATCCAACCCAACCCAAGCCG+TGG - chr1_1:48650199-48650218 Msa0025490:intron 60.0%
TCCAACCCAACCCAAGCCGT+GGG - chr1_1:48650200-48650219 Msa0025490:intron 60.0%
! CAAAAGCCCACGGCTTGGGT+TGG + chr1_1:48650209-48650228 None:intergenic 60.0%
GCGATCAAAAGCCCACGGCT+TGG + chr1_1:48650214-48650233 None:intergenic 60.0%
CTCGGGAACGTTGCCGAGAA+GGG + chr1_1:48650729-48650748 None:intergenic 60.0%
CTTCTCGGCAACGTTCCCGA+GGG - chr1_1:48650728-48650747 Msa0025490:intron 60.0%
TGGAGACGGGGGATGAGGAA+TGG - chr1_1:48650797-48650816 Msa0025490:intron 60.0%
CTGGCCCCTCAGGATTTCCT+TGG + chr1_1:48651012-48651031 None:intergenic 60.0%
CAAGGAAATCCTGAGGGGCC+AGG - chr1_1:48651010-48651029 Msa0025490:intron 60.0%
GTATACTTGCCTGGCCCCTC+AGG + chr1_1:48651022-48651041 None:intergenic 60.0%
AGGGGCCAGGCAAGTATACC+TGG - chr1_1:48651023-48651042 Msa0025490:intron 60.0%
GGGGCCAGGCAAGTATACCT+GGG - chr1_1:48651024-48651043 Msa0025490:intron 60.0%
!! GGTGATGGGGGGTGCTATGT+TGG - chr1_1:48651184-48651203 Msa0025490:intron 60.0%
!! GGGGGTGCTATGTTGGGACA+TGG - chr1_1:48651191-48651210 Msa0025490:intron 60.0%
CGGAACACCACCTGTTCTCC+GGG + chr1_1:48651401-48651420 None:intergenic 60.0%
GACACCTCCTCATCAGTCGG+AGG - chr1_1:48652874-48652893 Msa0025490:intron 60.0%
AACAGGAGGACGCAGCTGCT+GGG + chr1_1:48655592-48655611 None:intergenic 60.0%
TAACAGGAGGACGCAGCTGC+TGG + chr1_1:48655593-48655612 None:intergenic 60.0%
!! GGTCTTGTTCTGGTCCCTCG+GGG - chr1_1:48656506-48656525 Msa0025490:intron 60.0%
CTACCATCATCTGCTCCCCG+AGG + chr1_1:48656524-48656543 None:intergenic 60.0%
CGATTGCGAGCTTCAGCTGC+TGG - chr1_1:48656575-48656594 Msa0025490:intron 60.0%
! AGCTTCAGCTGCTGGTGACG+AGG - chr1_1:48656583-48656602 Msa0025490:intron 60.0%
! TTCAGCTGCTGGTGACGAGG+AGG - chr1_1:48656586-48656605 Msa0025490:intron 60.0%
GGTATCTGCTCTGCCCTTGC+TGG + chr1_1:48657304-48657323 None:intergenic 60.0%
GCAAGGGCAGAGCAGATACC+AGG - chr1_1:48657304-48657323 Msa0025490:intron 60.0%
CGGCTGTTCGTGGGCCAGTT+TGG + chr1_1:48650259-48650278 None:intergenic 65.0%
CCTCGGGAACGTTGCCGAGA+AGG + chr1_1:48650730-48650749 None:intergenic 65.0%
CCTTCTCGGCAACGTTCCCG+AGG - chr1_1:48650727-48650746 Msa0025490:intron 65.0%
GGCAACGTTCCCGAGGGTCA+GGG - chr1_1:48650734-48650753 Msa0025490:intron 65.0%
GTGAGTGGAGACGGGGGATG+AGG - chr1_1:48650792-48650811 Msa0025490:intron 65.0%
GGTGAGACCCGGAGAACAGG+TGG - chr1_1:48651391-48651410 Msa0025490:intron 65.0%
ACAGGAGGACGCAGCTGCTG+GGG + chr1_1:48655591-48655610 None:intergenic 65.0%
GTCCCTCGGGGAGCAGATGA+TGG - chr1_1:48656518-48656537 Msa0025490:intron 65.0%
! AGCTGCTGGTGACGAGGAGG+TGG - chr1_1:48656589-48656608 Msa0025490:intron 65.0%
!! GGGCGGCTGTTTCTGGCATC+TGG - chr1_1:48656774-48656793 Msa0025490:intron 65.0%
!! GCCCACGGCTTGGGTTGGGT+TGG + chr1_1:48650204-48650223 None:intergenic 70.0%
CGGCAACGTTCCCGAGGGTC+AGG - chr1_1:48650733-48650752 Msa0025490:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48648945 48657738 48648945 ID=Msa0025490;Name=Msa0025490
chr1_1 mRNA 48648945 48657738 48648945 ID=Msa0025490-mRNA-1;Parent=Msa0025490;Name=Msa0025490-mRNA-1;_AED=0.06;_eAED=0.06;_QI=384|1|1|1|0.87|0.77|9|192|817
chr1_1 exon 48648945 48649410 48648945 ID=Msa0025490-mRNA-1:exon:13997;Parent=Msa0025490-mRNA-1
chr1_1 exon 48650047 48650212 48650047 ID=Msa0025490-mRNA-1:exon:13996;Parent=Msa0025490-mRNA-1
chr1_1 exon 48651032 48651177 48651032 ID=Msa0025490-mRNA-1:exon:13995;Parent=Msa0025490-mRNA-1
chr1_1 exon 48651730 48651917 48651730 ID=Msa0025490-mRNA-1:exon:13994;Parent=Msa0025490-mRNA-1
chr1_1 exon 48652151 48652261 48652151 ID=Msa0025490-mRNA-1:exon:13993;Parent=Msa0025490-mRNA-1
chr1_1 exon 48652929 48653094 48652929 ID=Msa0025490-mRNA-1:exon:13992;Parent=Msa0025490-mRNA-1
chr1_1 exon 48653750 48653917 48653750 ID=Msa0025490-mRNA-1:exon:13991;Parent=Msa0025490-mRNA-1
chr1_1 exon 48654898 48656262 48654898 ID=Msa0025490-mRNA-1:exon:13990;Parent=Msa0025490-mRNA-1
chr1_1 exon 48657485 48657738 48657485 ID=Msa0025490-mRNA-1:exon:13989;Parent=Msa0025490-mRNA-1
chr1_1 five_prime_UTR 48657485 48657738 48657485 ID=Msa0025490-mRNA-1:five_prime_utr;Parent=Msa0025490-mRNA-1
chr1_1 five_prime_UTR 48656133 48656262 48656133 ID=Msa0025490-mRNA-1:five_prime_utr;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48654898 48656132 48654898 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48653750 48653917 48653750 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48652929 48653094 48652929 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48652151 48652261 48652151 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48651730 48651917 48651730 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48651032 48651177 48651032 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48650047 48650212 48650047 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 CDS 48649137 48649410 48649137 ID=Msa0025490-mRNA-1:cds;Parent=Msa0025490-mRNA-1
chr1_1 three_prime_UTR 48648945 48649136 48648945 ID=Msa0025490-mRNA-1:three_prime_utr;Parent=Msa0025490-mRNA-1
Gene Sequence

>Msa0025490

ATGTCTGGCTCCGTGGCCACAGTTAGTAGTTTGGATCGAACACAATCTCTTGCTATCTTTTCTAACATAGACCCTATATCTATATTGACAAACGGCGAAGCTGGTCATTCCACTGAAATTGCTGGTTTTAGAGTAGGGGAACTCTCTCTTCCTAATGGCGAGTCATATTCCGGATCCCTTCTCGGCAACGTTCCCGAGGGTCAGGGTAAGTATGTATGGTCAGATGGTTGTGTATATGATGGTGAGTGGAGACGGGGGATGAGGAATGGATTTGGGAAAATACAATGGCCTTCTGGTGTGTTGTATGAAGGTGAATTCTCTGGTGGCTATATCCACGGTACAGGATCATATATTGGCCCAGAAAGTCTGACCTACAAAGGTCGATGGCGATTCAATCTTAAACATGGCCTAGGTTATCAAGTTTATCCAAATGGAGATATATTTGAAGGCTCTTGGATCCAAGGAAATCCTGAGGGGCCAGGCAAGTATACCTGGGCTAACGGAAATGTATATTTGGGAAATATGAAAGGTGGGACAATGTCAGGCAAAGGAACCCTTACCTGGGTAAGTGGAGACTCGTTTGAAGGAAGCTGGTTAAATGGTATGATGCATGGTCTTGGCGCATATACTTGGGGTGATGGGGGGTGCTATGTTGGGACATGGACACGGGGTCTTAAAGATGGCAAAGGAACCTTTTATCCAAAAGGAAGCTGTCTGCCATCTGCACAAGAAGTATATCTCAATGCATTGAGAAAAAGAGGGCTATTACCAGATTTGAGAAAACAGAATCAGGTGCATATTCATAACACTGCTTCAGTTGATATGGGAAATGCTAGATTTGGTGAGACCCGGAGAACAGGTGGTGTTCCGTCTGGCACAGAAAACCTGTTAAATCTGGATCAATCTCGCAGCAAGAATGTTTCTCTTGAAAGGCGGTGGAGTTTAGAGGTAGCTATTGAGAAAGTGATTGGTCATGATTCACAATTTACCTCAACGGATTCAGTCTTCGCCGATGGAAATAAAGAGGTTAACGAAAAGATCCCCATTTTGGAGCGTGAATATATGCAAGGGGTATTAATAAGTGAGGTAGTCTTAAATAATAGTTTTGCATCACTTACTAGAAGAGCAAAGCAGCTTAAAAAAAAAATTGCCAAAGATATCAAAAGGCCCGGTGAACAAATTATTAAAGGCCACAGGAGTTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTATACTGTGGGAAAGATTACCCCCATACAGAGACGAGAAGTTCGAGCATCGGATTTTGGTGCCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAGTCGGAGGATTTTAAATGGAAAGATTACTGCCCTATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCAGACTACATGATGTCCATTTGTGGAAATGATGCTTTGAGAGAACTATCGTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCTTGTCTCAGGATGACCGTTTCATGATCAAGACACTGAGAAGATCAGAAGTAAAGGTTCTTCTAAGAATGCTTCCAGATTATCATCATCATGTGAAGTCATATGAGAATACACTCGTTACAAAGTTTTTTGGTTTGCACAGGATTATACCTTCAAGTGGCCAAAAGTTCCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTGAGGATCCATAGAAGATTTGATTTAAAAGGTTCATCCCTTGGACGTTCTTCCGACAAGATAGAAATCGATGAGAATACCACTCTTAAAGATTTGGATTTGAACTACTGCTTTTACTTGGAGCCGTCTTGGCGGGAGTCTTTATTAAAGCAGATTGAGACTGACAGCAAGTTCTTGGAGGAACAGCACATAATGGACTATAGTCTTCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCGTCCTCCTGTTAGTATAAGTTCAGATGGTTTGGCAATGCTTGCAGAGGAAGACCCTCTAGAGGATGAAGTATATAACTATCCTCAAGGTCTTGTTCTGGTCCCTCGGGGAGCAGATGATGGTAGTGTTGTTGTCGGGTCACACATTAGAGGTAGCCGATTGCGAGCTTCAGCTGCTGGTGACGAGGAGGTGGATCTTCTTCTACCTGGTACTGCAAGACTTCAAATCCAGTTAGGTGTGAACATGCCAGCAAGGGCAGAGCAGATACCAGGAAAAGAGGAAACTCAAATGTTCCACGAGGCTTATGACGTCGTACTATACCTGGGTATCATTGATATATTGCAAGATTACAACATGACTAAGAGGATTGAACATGCGTATAAATCACTTCAGTTTGATTCGTTATCTATATCGGCGGTGGATCCTACATTCTACTCTCGTCGCTTCCTGGATTTTATCCAGAGAGTGTTCCCATCAAATGTGCCAGGATAA
Protein sequence

>Msa0025490

MSGSVATVSSLDRTQSLAIFSNIDPISILTNGEAGHSTEIAGFRVGELSLPNGESYSGSLLGNVPEGQGKYVWSDGCVYDGEWRRGMRNGFGKIQWPSGVLYEGEFSGGYIHGTGSYIGPESLTYKGRWRFNLKHGLGYQVYPNGDIFEGSWIQGNPEGPGKYTWANGNVYLGNMKGGTMSGKGTLTWVSGDSFEGSWLNGMMHGLGAYTWGDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEVYLNALRKRGLLPDLRKQNQVHIHNTASVDMGNARFGETRRTGGVPSGTENLLNLDQSRSKNVSLERRWSLEVAIEKVIGHDSQFTSTDSVFADGNKEVNEKIPILEREYMQGVLISEVVLNNSFASLTRRAKQLKKKIAKDIKRPGEQIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGAKASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLVTKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIETDSKFLEEQHIMDYSLLLGVHYRAPQQLRPPVSISSDGLAMLAEEDPLEDEVYNYPQGLVLVPRGADDGSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEETQMFHEAYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSRRFLDFIQRVFPSNVPG*