Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0121240 | XP_013468112.1 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0121240 | sp|Q8L850|PI5K9_ARATH | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0121240 | A0A072VJC1 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0025490 | Msa0121240 | 0.910357 | 2.050401e-82 | -8.615850e-47 |
Msa0073040 | Msa0121240 | 0.989428 | 4.453562e-178 | -8.615850e-47 |
Msa0121240 | Msa0150620 | 0.800709 | 1.268839e-48 | -8.615850e-47 |
Msa0121240 | Msa0166250 | 0.980479 | 2.579655e-150 | -8.615850e-47 |
Msa0121240 | Msa0193190 | 0.803674 | 3.115019e-49 | -8.615850e-47 |
Msa0121240 | Msa0383900 | 0.804995 | 1.652950e-49 | -8.615850e-47 |
Msa0121240 | Msa0534610 | 0.800642 | 1.309672e-48 | -8.615850e-47 |
Msa0121240 | Msa0590810 | 0.803869 | 2.836894e-49 | -8.615850e-47 |
Msa0121240 | Msa0631130 | 0.803612 | 3.207376e-49 | -8.615850e-47 |
Msa0121240 | Msa0669350 | 0.808769 | 2.632301e-50 | -8.615850e-47 |
Msa0121240 | Msa0874640 | 0.801319 | 9.522681e-49 | -8.615850e-47 |
Msa0121240 | Msa1001120 | 0.802544 | 5.335612e-49 | -8.615850e-47 |
Msa0121240 | Msa1030210 | 0.821060 | 4.934205e-53 | -8.615850e-47 |
Msa0121240 | Msa1120580 | 0.805024 | 1.629539e-49 | -8.615850e-47 |
Msa0121240 | Msa1136760 | 0.800116 | 1.675986e-48 | -8.615850e-47 |
Msa0121240 | Msa1157110 | 0.806049 | 9.934277e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0121240 | MtrunA17_Chr1g0180261 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
Msa0121240 | MtrunA17_Chr8g0380791 | 51.535 | 782 | 343 | 10 | 44 | 812 | 6 | 764 | 0.0 | 772 |
Msa0121240 | MtrunA17_Chr1g0171491 | 41.577 | 837 | 401 | 19 | 3 | 811 | 14 | 790 | 0.0 | 596 |
Msa0121240 | MtrunA17_Chr8g0353121 | 42.401 | 783 | 349 | 16 | 47 | 811 | 49 | 747 | 0.0 | 581 |
Msa0121240 | MtrunA17_Chr7g0256301 | 43.278 | 781 | 368 | 17 | 47 | 811 | 67 | 788 | 0.0 | 580 |
Msa0121240 | MtrunA17_Chr7g0256301 | 33.588 | 131 | 64 | 1 | 45 | 175 | 134 | 241 | 3.84e-15 | 79.7 |
Msa0121240 | MtrunA17_Chr5g0424301 | 42.261 | 743 | 319 | 16 | 97 | 811 | 69 | 729 | 2.07e-180 | 536 |
Msa0121240 | MtrunA17_Chr5g0424301 | 48.066 | 181 | 85 | 1 | 42 | 213 | 60 | 240 | 9.02e-52 | 193 |
Msa0121240 | MtrunA17_Chr3g0115111 | 40.048 | 834 | 350 | 17 | 8 | 814 | 21 | 731 | 2.61e-179 | 533 |
Msa0121240 | MtrunA17_Chr3g0131001 | 41.421 | 746 | 307 | 16 | 97 | 811 | 55 | 701 | 2.26e-168 | 504 |
Msa0121240 | MtrunA17_Chr3g0131001 | 49.714 | 175 | 88 | 0 | 47 | 221 | 51 | 225 | 5.58e-47 | 179 |
Msa0121240 | MtrunA17_Chr8g0385201 | 52.632 | 437 | 146 | 7 | 386 | 811 | 277 | 663 | 1.45e-144 | 441 |
Msa0121240 | MtrunA17_Chr8g0385201 | 47.337 | 169 | 88 | 1 | 44 | 211 | 23 | 191 | 1.04e-46 | 177 |
Msa0121240 | MtrunA17_Chr8g0385201 | 35.036 | 137 | 88 | 1 | 97 | 232 | 30 | 166 | 1.81e-16 | 84.0 |
Msa0121240 | MtrunA17_Chr3g0082501 | 50.913 | 438 | 169 | 9 | 385 | 811 | 355 | 757 | 1.31e-131 | 410 |
Msa0121240 | MtrunA17_Chr3g0082501 | 48.691 | 191 | 98 | 0 | 47 | 237 | 60 | 250 | 3.43e-57 | 209 |
Msa0121240 | MtrunA17_Chr3g0082501 | 36.000 | 100 | 63 | 1 | 46 | 145 | 151 | 249 | 4.96e-11 | 66.6 |
Msa0121240 | MtrunA17_Chr8g0377191 | 38.043 | 184 | 114 | 0 | 47 | 230 | 8 | 191 | 2.82e-38 | 141 |
Msa0121240 | MtrunA17_Chr8g0377191 | 31.967 | 122 | 83 | 0 | 52 | 173 | 82 | 203 | 2.89e-16 | 78.2 |
Msa0121240 | MtrunA17_Chr8g0377191 | 29.907 | 107 | 75 | 0 | 46 | 152 | 99 | 205 | 1.10e-12 | 67.8 |
Msa0121240 | MtrunA17_Chr8g0382971 | 32.317 | 328 | 197 | 5 | 37 | 364 | 11 | 313 | 2.69e-36 | 140 |
Msa0121240 | MtrunA17_Chr8g0382971 | 33.333 | 195 | 128 | 1 | 28 | 220 | 46 | 240 | 5.12e-27 | 113 |
Msa0121240 | MtrunA17_Chr8g0377671 | 40.323 | 186 | 111 | 0 | 45 | 230 | 14 | 199 | 4.09e-36 | 138 |
Msa0121240 | MtrunA17_Chr8g0377671 | 35.802 | 162 | 104 | 0 | 46 | 207 | 107 | 268 | 5.51e-24 | 102 |
Msa0121240 | MtrunA17_Chr4g0059911 | 40.000 | 180 | 107 | 1 | 53 | 231 | 11 | 190 | 6.40e-32 | 128 |
Msa0121240 | MtrunA17_Chr4g0059911 | 31.739 | 230 | 148 | 2 | 48 | 272 | 53 | 278 | 9.18e-28 | 116 |
Msa0121240 | MtrunA17_Chr4g0059911 | 30.909 | 165 | 91 | 1 | 46 | 187 | 74 | 238 | 2.21e-15 | 79.0 |
Msa0121240 | MtrunA17_Chr2g0316611 | 34.649 | 228 | 144 | 3 | 46 | 272 | 100 | 323 | 1.18e-29 | 121 |
Msa0121240 | MtrunA17_Chr2g0316611 | 34.783 | 230 | 145 | 3 | 44 | 272 | 29 | 254 | 2.40e-29 | 120 |
Msa0121240 | MtrunA17_Chr2g0316611 | 36.735 | 196 | 123 | 1 | 46 | 240 | 169 | 364 | 1.06e-28 | 119 |
Msa0121240 | MtrunA17_Chr2g0316611 | 35.385 | 130 | 84 | 0 | 46 | 175 | 238 | 367 | 3.35e-19 | 90.5 |
Msa0121240 | MtrunA17_Chr2g0316631 | 33.333 | 237 | 152 | 4 | 44 | 279 | 29 | 260 | 6.12e-28 | 115 |
Msa0121240 | MtrunA17_Chr2g0316631 | 34.872 | 195 | 126 | 1 | 46 | 239 | 100 | 294 | 1.25e-26 | 111 |
Msa0121240 | MtrunA17_Chr6g0467061 | 32.340 | 235 | 146 | 2 | 46 | 279 | 83 | 305 | 1.34e-27 | 114 |
Msa0121240 | MtrunA17_Chr6g0467061 | 35.533 | 197 | 98 | 3 | 50 | 246 | 18 | 185 | 9.41e-26 | 109 |
Msa0121240 | MtrunA17_Chr6g0467061 | 34.239 | 184 | 121 | 0 | 46 | 229 | 152 | 335 | 1.64e-22 | 99.8 |
Msa0121240 | MtrunA17_Chr8g0377221 | 32.900 | 231 | 116 | 3 | 50 | 241 | 4 | 234 | 5.04e-27 | 111 |
Msa0121240 | MtrunA17_Chr8g0385241 | 27.532 | 385 | 189 | 11 | 56 | 364 | 15 | 385 | 3.90e-25 | 109 |
Msa0121240 | MtrunA17_Chr8g0385241 | 32.212 | 208 | 128 | 3 | 26 | 220 | 98 | 305 | 1.18e-22 | 101 |
Msa0121240 | MtrunA17_Chr8g0385241 | 30.573 | 157 | 108 | 1 | 45 | 200 | 175 | 331 | 5.42e-13 | 72.0 |
Msa0121240 | MtrunA17_Chr8g0385241 | 34.426 | 122 | 80 | 0 | 101 | 222 | 14 | 135 | 1.82e-12 | 70.5 |
Msa0121240 | MtrunA17_Chr8g0377211 | 39.231 | 130 | 79 | 0 | 78 | 207 | 23 | 152 | 4.69e-22 | 94.0 |
Msa0121240 | MtrunA17_Chr8g0377211 | 42.991 | 107 | 61 | 0 | 124 | 230 | 23 | 129 | 8.37e-22 | 93.2 |
Msa0121240 | MtrunA17_Chr8g0377211 | 30.769 | 117 | 81 | 0 | 45 | 161 | 36 | 152 | 5.58e-11 | 62.0 |
Msa0121240 | MtrunA17_Chr8g0336161 | 33.721 | 172 | 91 | 1 | 56 | 227 | 225 | 373 | 5.56e-21 | 97.1 |
Msa0121240 | MtrunA17_Chr8g0336161 | 29.082 | 196 | 114 | 2 | 37 | 232 | 185 | 355 | 2.84e-19 | 91.7 |
Msa0121240 | MtrunA17_Chr8g0336161 | 34.074 | 135 | 89 | 0 | 46 | 180 | 238 | 372 | 7.29e-13 | 71.6 |
Msa0121240 | MtrunA17_Chr8g0336161 | 34.545 | 110 | 72 | 0 | 124 | 233 | 201 | 310 | 9.40e-13 | 71.2 |
Msa0121240 | MtrunA17_Chr7g0233351 | 32.258 | 186 | 123 | 1 | 52 | 234 | 193 | 378 | 7.52e-21 | 96.7 |
Msa0121240 | MtrunA17_Chr7g0233351 | 32.298 | 161 | 109 | 0 | 72 | 232 | 190 | 350 | 1.53e-20 | 95.5 |
Msa0121240 | MtrunA17_Chr7g0233351 | 33.871 | 124 | 59 | 1 | 133 | 233 | 182 | 305 | 3.44e-12 | 69.7 |
Msa0121240 | MtrunA17_Chr4g0055371 | 30.049 | 203 | 134 | 2 | 72 | 274 | 170 | 364 | 1.08e-20 | 95.9 |
Msa0121240 | MtrunA17_Chr4g0055371 | 31.818 | 176 | 120 | 0 | 52 | 227 | 173 | 348 | 6.59e-20 | 93.2 |
Msa0121240 | MtrunA17_Chr4g0055371 | 29.592 | 196 | 131 | 3 | 8 | 203 | 159 | 347 | 9.08e-18 | 86.7 |
Msa0121240 | MtrunA17_Chr4g0055371 | 33.133 | 166 | 86 | 3 | 68 | 233 | 145 | 285 | 9.99e-15 | 77.4 |
Msa0121240 | MtrunA17_Chr3g0114791 | 32.121 | 165 | 112 | 0 | 68 | 232 | 179 | 343 | 1.39e-20 | 95.5 |
Msa0121240 | MtrunA17_Chr3g0114791 | 30.636 | 173 | 120 | 0 | 52 | 224 | 186 | 358 | 1.72e-18 | 89.0 |
Msa0121240 | MtrunA17_Chr3g0114791 | 33.333 | 138 | 69 | 2 | 96 | 233 | 184 | 298 | 2.80e-14 | 75.9 |
Msa0121240 | MtrunA17_Chr3g0114791 | 29.730 | 148 | 81 | 1 | 56 | 180 | 213 | 360 | 4.98e-13 | 72.0 |
Msa0121240 | MtrunA17_Chr5g0424111 | 31.609 | 174 | 119 | 0 | 59 | 232 | 182 | 355 | 3.45e-20 | 94.4 |
Msa0121240 | MtrunA17_Chr5g0424111 | 32.948 | 173 | 116 | 0 | 52 | 224 | 198 | 370 | 7.62e-20 | 93.2 |
Msa0121240 | MtrunA17_Chr5g0424111 | 34.058 | 138 | 68 | 2 | 96 | 233 | 196 | 310 | 2.10e-15 | 79.7 |
Msa0121240 | MtrunA17_Chr5g0424111 | 34.848 | 132 | 86 | 0 | 49 | 180 | 241 | 372 | 1.11e-13 | 74.3 |
Msa0121240 | MtrunA17_Chr8g0383331 | 32.484 | 157 | 101 | 2 | 94 | 245 | 1 | 157 | 5.29e-18 | 82.0 |
Msa0121240 | MtrunA17_Chr8g0383331 | 32.667 | 150 | 101 | 0 | 48 | 197 | 1 | 150 | 8.16e-18 | 81.6 |
Msa0121240 | MtrunA17_Chr8g0383331 | 31.757 | 148 | 101 | 0 | 73 | 220 | 3 | 150 | 8.31e-15 | 73.2 |
Msa0121240 | MtrunA17_Chr5g0398011 | 34.752 | 141 | 69 | 1 | 48 | 188 | 32 | 149 | 1.33e-16 | 77.8 |
Msa0121240 | MtrunA17_Chr5g0398011 | 36.036 | 111 | 71 | 0 | 97 | 207 | 35 | 145 | 1.41e-14 | 72.0 |
Msa0121240 | MtrunA17_Chr5g0398021 | 33.594 | 128 | 62 | 1 | 48 | 175 | 10 | 114 | 1.99e-14 | 71.6 |
Msa0121240 | MtrunA17_Chr5g0398021 | 34.694 | 98 | 64 | 0 | 99 | 196 | 15 | 112 | 4.76e-11 | 62.0 |
Msa0121240 | MtrunA17_Chr8g0383551 | 28.774 | 212 | 103 | 8 | 56 | 219 | 33 | 244 | 6.69e-14 | 74.3 |
Msa0121240 | MtrunA17_Chr8g0383551 | 31.169 | 154 | 94 | 3 | 73 | 214 | 109 | 262 | 4.98e-13 | 71.6 |
Msa0121240 | MtrunA17_Chr8g0383551 | 25.364 | 343 | 200 | 13 | 78 | 389 | 32 | 349 | 6.58e-13 | 71.2 |
Msa0121240 | MtrunA17_Chr8g0377201 | 43.750 | 64 | 36 | 0 | 142 | 205 | 3 | 66 | 8.92e-13 | 64.7 |
Msa0121240 | MtrunA17_Chr1g0210831 | 26.490 | 151 | 88 | 1 | 53 | 203 | 615 | 742 | 1.81e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0121240 | AT3G09920.3 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
Msa0121240 | AT3G09920.4 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
Msa0121240 | AT3G09920.2 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
Msa0121240 | AT3G09920.1 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
Msa0121240 | AT1G60890.1 | 50.576 | 781 | 356 | 8 | 44 | 812 | 4 | 766 | 0.0 | 766 |
Msa0121240 | AT1G60890.2 | 50.578 | 779 | 355 | 8 | 46 | 812 | 18 | 778 | 0.0 | 764 |
Msa0121240 | AT1G10900.2 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
Msa0121240 | AT1G10900.1 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
Msa0121240 | AT1G10900.3 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
Msa0121240 | AT2G41210.1 | 43.451 | 794 | 347 | 15 | 38 | 811 | 57 | 768 | 0.0 | 624 |
Msa0121240 | AT3G56960.2 | 43.056 | 792 | 348 | 17 | 46 | 814 | 67 | 778 | 0.0 | 613 |
Msa0121240 | AT3G56960.1 | 43.056 | 792 | 348 | 17 | 46 | 814 | 67 | 778 | 0.0 | 613 |
Msa0121240 | AT1G21980.1 | 42.703 | 740 | 332 | 14 | 97 | 811 | 76 | 748 | 0.0 | 541 |
Msa0121240 | AT1G21980.1 | 48.295 | 176 | 91 | 0 | 47 | 222 | 72 | 247 | 8.14e-51 | 191 |
Msa0121240 | AT1G21980.1 | 29.927 | 137 | 71 | 2 | 37 | 173 | 133 | 244 | 8.95e-13 | 72.8 |
Msa0121240 | AT1G77740.2 | 43.221 | 745 | 322 | 16 | 97 | 811 | 77 | 750 | 1.23e-179 | 535 |
Msa0121240 | AT1G77740.2 | 46.591 | 176 | 94 | 0 | 47 | 222 | 73 | 248 | 1.89e-51 | 193 |
Msa0121240 | AT1G77740.2 | 36.905 | 84 | 53 | 0 | 46 | 129 | 164 | 247 | 2.61e-11 | 67.8 |
Msa0121240 | AT1G77740.1 | 43.221 | 745 | 322 | 16 | 97 | 811 | 77 | 750 | 1.23e-179 | 535 |
Msa0121240 | AT1G77740.1 | 46.591 | 176 | 94 | 0 | 47 | 222 | 73 | 248 | 1.89e-51 | 193 |
Msa0121240 | AT1G77740.1 | 36.905 | 84 | 53 | 0 | 46 | 129 | 164 | 247 | 2.61e-11 | 67.8 |
Msa0121240 | AT2G26420.2 | 38.564 | 822 | 373 | 12 | 7 | 811 | 9 | 715 | 7.64e-177 | 526 |
Msa0121240 | AT2G26420.3 | 38.564 | 822 | 373 | 12 | 7 | 811 | 9 | 715 | 7.64e-177 | 526 |
Msa0121240 | AT2G26420.1 | 38.808 | 822 | 357 | 14 | 7 | 811 | 9 | 701 | 4.78e-176 | 524 |
Msa0121240 | AT3G07960.1 | 39.873 | 785 | 368 | 20 | 47 | 811 | 11 | 711 | 1.03e-174 | 521 |
Msa0121240 | AT3G07960.1 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 5.63e-28 | 121 |
Msa0121240 | AT3G07960.2 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.71e-143 | 436 |
Msa0121240 | AT3G07960.2 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 1.01e-27 | 119 |
Msa0121240 | AT3G07960.4 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.71e-143 | 436 |
Msa0121240 | AT3G07960.4 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 1.01e-27 | 119 |
Msa0121240 | AT3G07960.3 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.80e-143 | 436 |
Msa0121240 | AT3G07960.3 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 7.55e-28 | 120 |
Msa0121240 | AT4G01190.3 | 37.037 | 405 | 228 | 6 | 424 | 811 | 6 | 400 | 3.37e-83 | 272 |
Msa0121240 | AT4G01190.2 | 37.037 | 405 | 228 | 6 | 424 | 811 | 6 | 400 | 3.37e-83 | 272 |
Msa0121240 | AT4G01190.1 | 38.786 | 379 | 205 | 6 | 450 | 811 | 22 | 390 | 6.27e-83 | 271 |
Msa0121240 | AT1G01460.1 | 37.619 | 420 | 226 | 7 | 424 | 811 | 4 | 419 | 3.47e-82 | 270 |
Msa0121240 | AT1G77660.1 | 33.333 | 165 | 110 | 0 | 68 | 232 | 172 | 336 | 2.14e-21 | 98.2 |
Msa0121240 | AT1G77660.1 | 31.429 | 175 | 120 | 0 | 50 | 224 | 177 | 351 | 7.43e-19 | 90.5 |
Msa0121240 | AT1G77660.1 | 34.058 | 138 | 68 | 2 | 96 | 233 | 177 | 291 | 4.34e-15 | 79.0 |
Msa0121240 | AT1G77660.1 | 28.378 | 148 | 83 | 1 | 56 | 180 | 206 | 353 | 5.22e-12 | 69.3 |
Msa0121240 | AT4G17080.1 | 33.125 | 160 | 107 | 0 | 73 | 232 | 256 | 415 | 3.25e-21 | 98.6 |
Msa0121240 | AT4G17080.1 | 32.759 | 174 | 117 | 0 | 52 | 225 | 258 | 431 | 3.58e-20 | 95.5 |
Msa0121240 | AT4G17080.1 | 33.108 | 148 | 99 | 0 | 56 | 203 | 285 | 432 | 1.60e-19 | 93.6 |
Msa0121240 | AT4G17080.1 | 34.532 | 139 | 68 | 2 | 95 | 233 | 255 | 370 | 7.47e-15 | 78.6 |
Msa0121240 | AT4G17080.1 | 34.109 | 129 | 85 | 0 | 53 | 181 | 305 | 433 | 3.25e-13 | 73.6 |
Msa0121240 | AT2G35170.1 | 33.548 | 155 | 103 | 0 | 78 | 232 | 230 | 384 | 5.90e-21 | 97.8 |
Msa0121240 | AT2G35170.1 | 35.135 | 148 | 96 | 0 | 56 | 203 | 254 | 401 | 1.08e-20 | 96.7 |
Msa0121240 | AT2G35170.1 | 32.353 | 170 | 115 | 0 | 56 | 225 | 231 | 400 | 8.25e-20 | 94.0 |
Msa0121240 | AT2G35170.1 | 35.211 | 142 | 92 | 0 | 53 | 194 | 274 | 415 | 2.36e-15 | 80.1 |
Msa0121240 | AT2G35170.1 | 34.586 | 133 | 64 | 2 | 101 | 233 | 230 | 339 | 1.01e-13 | 75.1 |
Msa0121240 | AT1G21920.1 | 32.727 | 165 | 111 | 0 | 68 | 232 | 168 | 332 | 7.41e-21 | 96.7 |
Msa0121240 | AT1G21920.1 | 35.135 | 148 | 96 | 0 | 56 | 203 | 202 | 349 | 5.93e-19 | 90.9 |
Msa0121240 | AT1G21920.1 | 31.159 | 138 | 72 | 2 | 96 | 233 | 173 | 287 | 6.69e-13 | 72.0 |
Msa0121240 | AT1G21920.2 | 32.727 | 165 | 111 | 0 | 68 | 232 | 168 | 332 | 1.45e-20 | 95.1 |
Msa0121240 | AT1G21920.2 | 35.135 | 148 | 96 | 0 | 56 | 203 | 202 | 349 | 1.07e-18 | 89.4 |
Msa0121240 | AT1G21920.2 | 31.159 | 138 | 72 | 2 | 96 | 233 | 173 | 287 | 1.87e-12 | 70.1 |
Msa0121240 | AT1G75010.1 | 25.676 | 148 | 87 | 1 | 56 | 203 | 607 | 731 | 2.30e-12 | 71.2 |
Msa0121240 | AT1G75010.1 | 31.496 | 127 | 87 | 0 | 99 | 225 | 604 | 730 | 3.83e-11 | 67.4 |
Msa0121240 | AT1G71010.1 | 30.882 | 204 | 121 | 8 | 457 | 645 | 1378 | 1576 | 8.84e-11 | 66.6 |
Find 259 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTGTAGGTCAGACTTTC+TGG | 0.032461 | 1_3:-46870399 | None:intergenic |
CATTTGATGGGAACACTTTC+TGG | 0.101303 | 1_3:-46877005 | None:intergenic |
GGCTAACGGAAATGTATATT+TGG | 0.153313 | 1_3:+46870536 | Msa0121240:CDS |
CATAGAAGATTTGATTTAAA+AGG | 0.178433 | 1_3:+46874306 | Msa0121240:CDS |
CATATATTCACGCTCCAAAA+TGG | 0.193595 | 1_3:-46871084 | None:intergenic |
CCCTTGAAACTTTGTCCTTT+TGG | 0.197545 | 1_3:-46869912 | None:intergenic |
TAACGAAAAGATCCCCATTT+TGG | 0.204980 | 1_3:+46871070 | Msa0121240:CDS |
TAACACTGCTTCAGTTGATA+TGG | 0.226428 | 1_3:+46870845 | Msa0121240:CDS |
GAAGTTCGAGCATCGGATTT+TGG | 0.230682 | 1_3:+46872291 | Msa0121240:CDS |
GGAAAACGAGTAGCGAAATT+TGG | 0.236150 | 1_3:+46868542 | Msa0121240:five_prime_UTR |
CCGTTTGTCAATATAGATAT+AGG | 0.267813 | 1_3:-46870114 | None:intergenic |
ATTCTACTCTCGTCGCTTCC+TGG | 0.269786 | 1_3:+46876975 | Msa0121240:CDS |
GGTATCTGCTCTGCCCTTGC+TGG | 0.270097 | 1_3:-46876793 | None:intergenic |
CCCGGTGAACAAATTATTAA+AGG | 0.280312 | 1_3:+46871209 | Msa0121240:CDS |
TTTGAAGGAAGCTGGTTAAA+TGG | 0.303077 | 1_3:+46870621 | Msa0121240:CDS |
GTCAATTGAGAACCTTCTTT+AGG | 0.304786 | 1_3:-46872342 | None:intergenic |
ATGGACTATAGTCTTCTTCT+AGG | 0.307126 | 1_3:+46875041 | Msa0121240:CDS |
TGAGACTGACAGCAAGTTCT+TGG | 0.307848 | 1_3:+46875004 | Msa0121240:CDS |
CTGGCATGTTCACACCTAAC+TGG | 0.309968 | 1_3:-46876774 | None:intergenic |
CTTTATCCTGGCACATTTGA+TGG | 0.312989 | 1_3:-46877018 | None:intergenic |
GATGGCAGACAGCTTCCTTT+TGG | 0.316804 | 1_3:-46870741 | None:intergenic |
GAATACCACTCTTAAAGATT+TGG | 0.317905 | 1_3:+46874371 | Msa0121240:CDS |
CAGTTCCGCTTTGTTGTAAT+GGG | 0.331322 | 1_3:+46874255 | Msa0121240:intron |
TGAAAGGCGGTGGAGTTTAG+AGG | 0.341412 | 1_3:+46870968 | Msa0121240:CDS |
GAGATTGATCCAGATTTAAC+AGG | 0.341541 | 1_3:-46870926 | None:intergenic |
GGGAAAATACAATGGCCTTC+TGG | 0.345502 | 1_3:+46870315 | Msa0121240:CDS |
CACAGAAAACCTGTTAAATC+TGG | 0.351274 | 1_3:+46870917 | Msa0121240:CDS |
CGGCAACGTTCCCGAGGGTC+AGG | 0.351945 | 1_3:+46870224 | Msa0121240:CDS |
CGCATATACTTGGGGTGATG+GGG | 0.352244 | 1_3:+46870662 | Msa0121240:CDS |
CTGGCCCCTCAGGATTTCCT+TGG | 0.353999 | 1_3:-46870500 | None:intergenic |
ATTACTGCCCTATGGTGTTC+AGG | 0.369775 | 1_3:+46872400 | Msa0121240:CDS |
CAGGCAAAGGAACCCTTACC+TGG | 0.372399 | 1_3:+46870583 | Msa0121240:CDS |
TTAGTTTGCAGCTCGGAATA+AGG | 0.372857 | 1_3:+46871255 | Msa0121240:CDS |
CCTAATGGCGAGTCATATTC+CGG | 0.375150 | 1_3:+46870192 | Msa0121240:CDS |
GAATCGCCATCGACCTTTGT+AGG | 0.376437 | 1_3:-46870412 | None:intergenic |
CACGGTACAGGATCATATAT+TGG | 0.377388 | 1_3:+46870375 | Msa0121240:CDS |
GGTCATTCCACTGAAATTGC+TGG | 0.377930 | 1_3:+46870144 | Msa0121240:CDS |
GCAGTTCCGCTTTGTTGTAA+TGG | 0.378074 | 1_3:+46874254 | Msa0121240:intron |
TCTTGTAGCTGTTGAGAATC+CGG | 0.379553 | 1_3:+46869975 | Msa0121240:five_prime_UTR |
AGGGGCCAGGCAAGTATACC+TGG | 0.381587 | 1_3:+46870514 | Msa0121240:CDS |
ATGGTCTTGGCGCATATACT+TGG | 0.382832 | 1_3:+46870652 | Msa0121240:CDS |
GAGATATATTTGAAGGCTCT+TGG | 0.382922 | 1_3:+46870475 | Msa0121240:CDS |
GTTTGATTCGTTATCTATAT+CGG | 0.383128 | 1_3:+46876939 | Msa0121240:CDS |
GCCTTTAATAATTTGTTCAC+CGG | 0.383988 | 1_3:-46871210 | None:intergenic |
TCGAACTTCTCGTCTCTGTA+TGG | 0.387041 | 1_3:-46872277 | None:intergenic |
GCGCATATACTTGGGGTGAT+GGG | 0.388619 | 1_3:+46870661 | Msa0121240:CDS |
AAGGTCTTGTTCTGGTCCCT+CGG | 0.390579 | 1_3:+46875996 | Msa0121240:CDS |
CGAACTTCTCGTCTCTGTAT+GGG | 0.392097 | 1_3:-46872276 | None:intergenic |
GGGATAGTTATAATTCTATA+AGG | 0.394517 | 1_3:+46869996 | Msa0121240:five_prime_UTR |
CGTGGCCACAGTTAGTAGTT+TGG | 0.396056 | 1_3:+46870053 | Msa0121240:CDS |
TTCACATGATGATGATAATC+TGG | 0.397576 | 1_3:-46873932 | None:intergenic |
ACAAAGCATGCATGCACAAA+AGG | 0.398202 | 1_3:-46877098 | None:intergenic |
GTATACTTGCCTGGCCCCTC+AGG | 0.398524 | 1_3:-46870510 | None:intergenic |
CCATCTGAACTTATACTAAC+AGG | 0.402778 | 1_3:-46875098 | None:intergenic |
CTTTGTAGGTCAGACTTTCT+GGG | 0.403996 | 1_3:-46870398 | None:intergenic |
AGAATAAAGTCAAGTGTTGT+AGG | 0.407972 | 1_3:-46868637 | None:intergenic |
ATATATTCACGCTCCAAAAT+GGG | 0.411809 | 1_3:-46871083 | None:intergenic |
CCGGAATATGACTCGCCATT+AGG | 0.412364 | 1_3:-46870192 | None:intergenic |
GGCGCATATACTTGGGGTGA+TGG | 0.412463 | 1_3:+46870660 | Msa0121240:CDS |
CAAAGCATCATTTCCACAAA+TGG | 0.412721 | 1_3:-46873124 | None:intergenic |
CTCATCGATTTCTATCTTGT+CGG | 0.415967 | 1_3:-46874349 | None:intergenic |
ATTCATCCAAAAGCTTGCTT+TGG | 0.417999 | 1_3:-46872316 | None:intergenic |
TAACAGGAGGACGCAGCTGC+TGG | 0.418233 | 1_3:-46875082 | None:intergenic |
TTGGTGCCAAAGCAAGCTTT+TGG | 0.418662 | 1_3:+46872310 | Msa0121240:CDS |
GCTAACGGAAATGTATATTT+GGG | 0.418772 | 1_3:+46870537 | Msa0121240:CDS |
GATTTAAAAGGTTCATCCCT+TGG | 0.420681 | 1_3:+46874318 | Msa0121240:CDS |
TCATATTCCGGATCCCTTCT+CGG | 0.428398 | 1_3:+46870204 | Msa0121240:CDS |
AGGTCTTGTTCTGGTCCCTC+GGG | 0.429600 | 1_3:+46875997 | Msa0121240:CDS |
CTATCCTCAAGGTCTTGTTC+TGG | 0.430649 | 1_3:+46875988 | Msa0121240:CDS |
TAGTATAAGTTCAGATGGTT+TGG | 0.431889 | 1_3:+46875103 | Msa0121240:CDS |
CCTTCAAATATATCTCCATT+TGG | 0.434696 | 1_3:-46870468 | None:intergenic |
TTTGGTGAGACCCGGAGAAC+AGG | 0.435312 | 1_3:+46870879 | Msa0121240:CDS |
ACGGAACACCACCTGTTCTC+CGG | 0.436364 | 1_3:-46870890 | None:intergenic |
GCATATACTTGGGGTGATGG+GGG | 0.437543 | 1_3:+46870663 | Msa0121240:CDS |
GGTTATCAAGTTTATCCAAA+TGG | 0.441746 | 1_3:+46870453 | Msa0121240:CDS |
GATATGGGAAATGCTAGATT+TGG | 0.444711 | 1_3:+46870861 | Msa0121240:CDS |
TTACTTGGAGCCGTCTTGGC+GGG | 0.446907 | 1_3:+46874410 | Msa0121240:CDS |
CGATTGCGAGCTTCAGCTGC+TGG | 0.449991 | 1_3:+46876067 | Msa0121240:CDS |
ATGAAAGGTGGGACAATGTC+AGG | 0.450369 | 1_3:+46870564 | Msa0121240:CDS |
AGCTGCTGGTGACGAGGAGG+TGG | 0.451559 | 1_3:+46876081 | Msa0121240:CDS |
CCAAATGGAGATATATTTGA+AGG | 0.451632 | 1_3:+46870468 | Msa0121240:CDS |
AGATTTGAGAAAACAGAATC+AGG | 0.458804 | 1_3:+46870812 | Msa0121240:CDS |
AACGTTGCCGAGAAGGGATC+CGG | 0.460862 | 1_3:-46870211 | None:intergenic |
AGACATGCATAATGATCAAA+AGG | 0.461373 | 1_3:-46870025 | None:intergenic |
ATATGATGGTGAGTGGAGAC+GGG | 0.461506 | 1_3:+46870275 | Msa0121240:CDS |
CATATACTTGGGGTGATGGG+GGG | 0.462159 | 1_3:+46870664 | Msa0121240:CDS |
CAAAACGAAACGAAACTCAT+TGG | 0.463122 | 1_3:+46868521 | Msa0121240:five_prime_UTR |
TATATGATGGTGAGTGGAGA+CGG | 0.465323 | 1_3:+46870274 | Msa0121240:CDS |
AGAACAGGTGGTGTTCCGTC+TGG | 0.468196 | 1_3:+46870894 | Msa0121240:CDS |
AAGATTACAACATGACTAAG+AGG | 0.470669 | 1_3:+46876890 | Msa0121240:CDS |
CGGAACACCACCTGTTCTCC+GGG | 0.474120 | 1_3:-46870889 | None:intergenic |
TTATAGAATTATAACTATCC+CGG | 0.476448 | 1_3:-46869994 | None:intergenic |
CTATGTTGGGACATGGACAC+GGG | 0.476652 | 1_3:+46870689 | Msa0121240:CDS |
TGCAGACTTCAAATCCAGTT+AGG | 0.478493 | 1_3:+46876760 | Msa0121240:intron |
CGTTTGTCAATATAGATATA+GGG | 0.484716 | 1_3:-46870113 | None:intergenic |
GCAAGGGCAGAGCAGATACC+AGG | 0.484764 | 1_3:+46876796 | Msa0121240:CDS |
TTGAGAGAACTATCGTCTCC+AGG | 0.486817 | 1_3:+46873144 | Msa0121240:CDS |
GCTATGTTGGGACATGGACA+CGG | 0.491026 | 1_3:+46870688 | Msa0121240:CDS |
AGACAAGAATGGTTGCAGAT+AGG | 0.491551 | 1_3:-46869955 | None:intergenic |
CTTGGAGGAACAGCACATAA+TGG | 0.491731 | 1_3:+46875022 | Msa0121240:CDS |
ATATTGACAAACGGCGAAGC+TGG | 0.492267 | 1_3:+46870123 | Msa0121240:CDS |
CAAGGAAATCCTGAGGGGCC+AGG | 0.493390 | 1_3:+46870501 | Msa0121240:CDS |
CCTGTTAGTATAAGTTCAGA+TGG | 0.493551 | 1_3:+46875098 | Msa0121240:CDS |
AACACTGCTTCAGTTGATAT+GGG | 0.495094 | 1_3:+46870846 | Msa0121240:CDS |
AGGGTCAGGGTAAGTATGTA+TGG | 0.497129 | 1_3:+46870238 | Msa0121240:CDS |
GCAAGAATGTTTCTCTTGAA+AGG | 0.498157 | 1_3:+46870952 | Msa0121240:CDS |
ATGTTTCTCTTGAAAGGCGG+TGG | 0.498163 | 1_3:+46870958 | Msa0121240:CDS |
GTTAACCTCTTTATTTCCAT+CGG | 0.499478 | 1_3:-46871051 | None:intergenic |
GTAGCTATTGAGAAAGTGAT+TGG | 0.500108 | 1_3:+46870990 | Msa0121240:CDS |
AACAGGAGGACGCAGCTGCT+GGG | 0.500261 | 1_3:-46875081 | None:intergenic |
GGGGAACTCTCTCTTCCTAA+TGG | 0.501996 | 1_3:+46870177 | Msa0121240:CDS |
TTTGAAGGCTCTTGGATCCA+AGG | 0.502212 | 1_3:+46870483 | Msa0121240:CDS |
TATACCTTCAAGTGGCCAAA+AGG | 0.503382 | 1_3:+46874003 | Msa0121240:CDS |
AATGGTATGATGCATGGTCT+TGG | 0.506505 | 1_3:+46870639 | Msa0121240:CDS |
TTCGTTATCTATATCGGCGG+TGG | 0.508660 | 1_3:+46876945 | Msa0121240:CDS |
GAGACTCGTTTGAAGGAAGC+TGG | 0.508961 | 1_3:+46870613 | Msa0121240:CDS |
CTCGGGAACGTTGCCGAGAA+GGG | 0.509049 | 1_3:-46870217 | None:intergenic |
GCCAAAAGGACAAAGTTTCA+AGG | 0.509283 | 1_3:+46869911 | Msa0121240:intron |
AAGTTACTCAAACTTTATCC+TGG | 0.509319 | 1_3:-46877030 | None:intergenic |
TTCAATCTTAAACATGGCCT+AGG | 0.509691 | 1_3:+46870432 | Msa0121240:CDS |
GTAAGTGGAGACTCGTTTGA+AGG | 0.510136 | 1_3:+46870606 | Msa0121240:CDS |
AGTCTCCACTTACCCAGGTA+AGG | 0.510329 | 1_3:-46870596 | None:intergenic |
CTTGTAGCTGTTGAGAATCC+GGG | 0.511102 | 1_3:+46869976 | Msa0121240:five_prime_UTR |
GTCCCTCGGGGAGCAGATGA+TGG | 0.512041 | 1_3:+46876010 | Msa0121240:CDS |
CCTCGGGAACGTTGCCGAGA+AGG | 0.514362 | 1_3:-46870218 | None:intergenic |
TTGTATGAAGGTGAATTCTC+TGG | 0.515684 | 1_3:+46870342 | Msa0121240:CDS |
TTTATCCTGGCACATTTGAT+GGG | 0.518514 | 1_3:-46877017 | None:intergenic |
TTTACTTGGAGCCGTCTTGG+CGG | 0.518574 | 1_3:+46874409 | Msa0121240:CDS |
AGATATACTTCTTGTGCAGA+TGG | 0.519993 | 1_3:-46870759 | None:intergenic |
TAAACTAACCTGAACACCAT+AGG | 0.523925 | 1_3:-46872408 | None:intergenic |
GGAACCCTTACCTGGGTAAG+TGG | 0.524147 | 1_3:+46870591 | Msa0121240:CDS |
AAGAATTACCTTGCAGTACC+AGG | 0.524982 | 1_3:-46876115 | None:intergenic |
ACTGAGAAGATCAGAAGTAA+AGG | 0.525732 | 1_3:+46873221 | Msa0121240:CDS |
GGTGGCTATATCCACGGTAC+AGG | 0.525855 | 1_3:+46870363 | Msa0121240:CDS |
GAACTTCTCGTCTCTGTATG+GGG | 0.526707 | 1_3:-46872275 | None:intergenic |
GACTGACAGCAAGTTCTTGG+AGG | 0.527070 | 1_3:+46875007 | Msa0121240:CDS |
TGATTCACAATTTGCCTCAA+CGG | 0.528838 | 1_3:+46871016 | Msa0121240:CDS |
ATGGAAAGATTACTGCCCTA+TGG | 0.530066 | 1_3:+46872392 | Msa0121240:CDS |
ACATACTTACCCTGACCCTC+GGG | 0.531555 | 1_3:-46870234 | None:intergenic |
CAAAGCATGCATGCACAAAA+GGG | 0.532040 | 1_3:-46877097 | None:intergenic |
GATGATGGTAGTGTTGTTGT+CGG | 0.532990 | 1_3:+46876025 | Msa0121240:CDS |
TGGTCTTGGCGCATATACTT+GGG | 0.533338 | 1_3:+46870653 | Msa0121240:CDS |
TACATACTTACCCTGACCCT+CGG | 0.534192 | 1_3:-46870235 | None:intergenic |
GACTACATGATGTCCATTTG+TGG | 0.535966 | 1_3:+46873111 | Msa0121240:CDS |
ATTTGGGAAATATGAAAGGT+GGG | 0.536411 | 1_3:+46870553 | Msa0121240:CDS |
GTGTTCCCATCAAATGTGCC+AGG | 0.537171 | 1_3:+46877012 | Msa0121240:CDS |
CCTTTAATAATTTGTTCACC+GGG | 0.538422 | 1_3:-46871209 | None:intergenic |
AGAGCAGATACCAGGAAAAG+AGG | 0.538731 | 1_3:+46876804 | Msa0121240:CDS |
AAATTGCCAAAGATATCAAA+AGG | 0.539194 | 1_3:+46871186 | Msa0121240:CDS |
ACACTTTCTGGATAAAATCC+AGG | 0.539376 | 1_3:-46876993 | None:intergenic |
CCTATATCTATATTGACAAA+CGG | 0.539708 | 1_3:+46870114 | Msa0121240:CDS |
TTATGACGTCGTACTATACC+TGG | 0.539798 | 1_3:+46876849 | Msa0121240:CDS |
TATTTGGGAAATATGAAAGG+TGG | 0.542050 | 1_3:+46870552 | Msa0121240:CDS |
GCCAAAGATATCAAAAGGCC+CGG | 0.542683 | 1_3:+46871191 | Msa0121240:CDS |
CTATCGTCTCCAGGGAAAAG+TGG | 0.543810 | 1_3:+46873153 | Msa0121240:CDS |
AGCTTCAGCTGCTGGTGACG+AGG | 0.544007 | 1_3:+46876075 | Msa0121240:CDS |
TTAGCCCAGGTATACTTGCC+TGG | 0.547788 | 1_3:-46870519 | None:intergenic |
AAGCGACGAGAGTAGAATGT+AGG | 0.549703 | 1_3:-46876970 | None:intergenic |
ACAGGAGGACGCAGCTGCTG+GGG | 0.554405 | 1_3:-46875080 | None:intergenic |
GGTAAGTATGTATGGTCAGA+TGG | 0.555310 | 1_3:+46870246 | Msa0121240:CDS |
AGTTTCAAGGGTCAATCACT+TGG | 0.555849 | 1_3:+46869924 | Msa0121240:five_prime_UTR |
ACGGATTCAGTCTTCGCCGA+TGG | 0.557719 | 1_3:+46871035 | Msa0121240:CDS |
AACAAATTATTAAAGGCCAC+AGG | 0.558304 | 1_3:+46871216 | Msa0121240:CDS |
TAAAGTCAAGTGTTGTAGGT+GGG | 0.558407 | 1_3:-46868633 | None:intergenic |
TCAGTGTCTTGATCATGAAA+CGG | 0.559373 | 1_3:-46873203 | None:intergenic |
ATATGTTCTGCACAGAATTG+AGG | 0.559541 | 1_3:+46874280 | Msa0121240:CDS |
TTCTCTGGTGGCTATATCCA+CGG | 0.561216 | 1_3:+46870357 | Msa0121240:CDS |
TTGGCAATGCTTGCAGAGGA+AGG | 0.564272 | 1_3:+46875122 | Msa0121240:CDS |
CAGCAGCTGAAGCTCGCAAT+CGG | 0.564387 | 1_3:-46876066 | None:intergenic |
AAACTAACCTGAACACCATA+GGG | 0.565431 | 1_3:-46872407 | None:intergenic |
CCTTCTGGTGTGTTGTATGA+AGG | 0.565486 | 1_3:+46870330 | Msa0121240:CDS |
TTGGATAAACTTGATAACCT+AGG | 0.565805 | 1_3:-46870449 | None:intergenic |
GTTGTCGGGTCACACATTAG+AGG | 0.566169 | 1_3:+46876040 | Msa0121240:CDS |
TCTTGTCGGAAGAACGTCCA+AGG | 0.570830 | 1_3:-46874335 | None:intergenic |
ATATACATTTCCGTTAGCCC+AGG | 0.571683 | 1_3:-46870532 | None:intergenic |
CCTTCTCGGCAACGTTCCCG+AGG | 0.572618 | 1_3:+46870218 | Msa0121240:CDS |
GTATATTTGGGAAATATGAA+AGG | 0.572931 | 1_3:+46870549 | Msa0121240:CDS |
TGGACACGGGGTCTTAAAGA+TGG | 0.577970 | 1_3:+46870702 | Msa0121240:CDS |
TTGGAGCGTGAATATATGCA+AGG | 0.578663 | 1_3:+46871089 | Msa0121240:CDS |
ATGCTAGATTTGGTGAGACC+CGG | 0.578871 | 1_3:+46870871 | Msa0121240:CDS |
GGCAAGTATACCTGGGCTAA+CGG | 0.580636 | 1_3:+46870522 | Msa0121240:CDS |
TATATACTTCATCCTCTAGA+GGG | 0.582725 | 1_3:-46875964 | None:intergenic |
CTTCGCCGATGGAAATAAAG+AGG | 0.582727 | 1_3:+46871046 | Msa0121240:CDS |
CAAACTACTAACTGTGGCCA+CGG | 0.585273 | 1_3:-46870052 | None:intergenic |
CAACAGCTACAAGACAAGAA+TGG | 0.585911 | 1_3:-46869966 | None:intergenic |
GGCAACGTTCCCGAGGGTCA+GGG | 0.586924 | 1_3:+46870225 | Msa0121240:CDS |
CACAGGATTATACCTTCAAG+TGG | 0.587271 | 1_3:+46873995 | Msa0121240:CDS |
ATGATGGTAGTGTTGTTGTC+GGG | 0.587597 | 1_3:+46876026 | Msa0121240:CDS |
CAAATCCAAATCTTTAAGAG+TGG | 0.589290 | 1_3:-46874376 | None:intergenic |
TAGGTGTGAACATGCCAGCA+AGG | 0.591715 | 1_3:+46876779 | Msa0121240:CDS |
TTCTTCTACCTGGTACTGCA+AGG | 0.594688 | 1_3:+46876107 | Msa0121240:CDS |
GAGACGAGAAGTTCGAGCAT+CGG | 0.594986 | 1_3:+46872284 | Msa0121240:CDS |
CCTTCATACAACACACCAGA+AGG | 0.602183 | 1_3:-46870330 | None:intergenic |
TTCAGCTGCTGGTGACGAGG+AGG | 0.602690 | 1_3:+46876078 | Msa0121240:CDS |
CCAAAAGGACAAAGTTTCAA+GGG | 0.603673 | 1_3:+46869912 | Msa0121240:five_prime_UTR |
ATAAAGTCAAGTGTTGTAGG+TGG | 0.605120 | 1_3:-46868634 | None:intergenic |
TGGATCCAAGGAAATCCTGA+GGG | 0.606779 | 1_3:+46870495 | Msa0121240:CDS |
TTATATACTTCATCCTCTAG+AGG | 0.607130 | 1_3:-46875965 | None:intergenic |
TATATTCACGCTCCAAAATG+GGG | 0.608393 | 1_3:-46871082 | None:intergenic |
AATAAAGACTCCCGCCAAGA+CGG | 0.610613 | 1_3:-46874420 | None:intergenic |
ATTGACACCTCCTCATCAGT+CGG | 0.612372 | 1_3:+46872359 | Msa0121240:CDS |
TGGAGCGTGAATATATGCAA+GGG | 0.612966 | 1_3:+46871090 | Msa0121240:CDS |
TGAGAGAACTATCGTCTCCA+GGG | 0.613070 | 1_3:+46873145 | Msa0121240:CDS |
GCAATATATCAATGATACCC+AGG | 0.613082 | 1_3:-46876867 | None:intergenic |
CCAGAAAGTCTGACCTACAA+AGG | 0.613083 | 1_3:+46870399 | Msa0121240:CDS |
GTCTGACCTACAAAGGTCGA+TGG | 0.613814 | 1_3:+46870406 | Msa0121240:CDS |
TATGATGGTGAGTGGAGACG+GGG | 0.614874 | 1_3:+46870276 | Msa0121240:CDS |
GTTGTGTATATGATGGTGAG+TGG | 0.615250 | 1_3:+46870268 | Msa0121240:CDS |
AGGTGTGAACATGCCAGCAA+GGG | 0.616410 | 1_3:+46876780 | Msa0121240:CDS |
CTGATGCTTAGTTTGCAGCT+CGG | 0.616521 | 1_3:+46871248 | Msa0121240:CDS |
TCAAATGGCTAGGTATACTG+TGG | 0.619000 | 1_3:+46872242 | Msa0121240:intron |
GTCTCCACTTACCCAGGTAA+GGG | 0.619943 | 1_3:-46870595 | None:intergenic |
GCAAGGGGTATTAATAAGTG+AGG | 0.622233 | 1_3:+46871106 | Msa0121240:CDS |
TGGTTTGGCAATGCTTGCAG+AGG | 0.623080 | 1_3:+46875118 | Msa0121240:CDS |
TTAAAATCCTCCGACTGATG+AGG | 0.624649 | 1_3:-46872369 | None:intergenic |
TACCATCATCTGCTCCCCGA+GGG | 0.625035 | 1_3:-46876012 | None:intergenic |
GAAGTATATAACTATCCTCA+AGG | 0.626789 | 1_3:+46875977 | Msa0121240:CDS |
TGGCGATTCAATCTTAAACA+TGG | 0.628373 | 1_3:+46870426 | Msa0121240:CDS |
GGTCTTGGCGCATATACTTG+GGG | 0.631149 | 1_3:+46870654 | Msa0121240:CDS |
TCTAAAACCAGCAATTTCAG+TGG | 0.631528 | 1_3:-46870151 | None:intergenic |
ATGGATTTGGGAAAATACAA+TGG | 0.632638 | 1_3:+46870307 | Msa0121240:CDS |
GGTGGGACAATGTCAGGCAA+AGG | 0.633057 | 1_3:+46870570 | Msa0121240:CDS |
CTTCTCGGCAACGTTCCCGA+GGG | 0.634639 | 1_3:+46870219 | Msa0121240:CDS |
GAGGTGGATCTTCTTCTACC+TGG | 0.635208 | 1_3:+46876097 | Msa0121240:CDS |
AACTTCTCGTCTCTGTATGG+GGG | 0.638602 | 1_3:-46872274 | None:intergenic |
AAATCCTCCGACTGATGAGG+AGG | 0.639574 | 1_3:-46872366 | None:intergenic |
AAACGAGTCTCCACTTACCC+AGG | 0.643861 | 1_3:-46870601 | None:intergenic |
TATGAAGGTGAATTCTCTGG+TGG | 0.644862 | 1_3:+46870345 | Msa0121240:CDS |
ATGATGGTGAGTGGAGACGG+GGG | 0.645871 | 1_3:+46870277 | Msa0121240:CDS |
TTGGATCCAAGGAAATCCTG+AGG | 0.646382 | 1_3:+46870494 | Msa0121240:CDS |
ATTATGCATGTCTGGCTCCG+TGG | 0.646691 | 1_3:+46870035 | Msa0121240:exon |
GCATCAGATCATAACTCCTG+TGG | 0.647690 | 1_3:-46871232 | None:intergenic |
CGGGGTCTTAAAGATGGCAA+AGG | 0.648365 | 1_3:+46870708 | Msa0121240:CDS |
GGTGAGACCCGGAGAACAGG+TGG | 0.648651 | 1_3:+46870882 | Msa0121240:CDS |
TGGTTAAATGGTATGATGCA+TGG | 0.651397 | 1_3:+46870633 | Msa0121240:CDS |
CAAATGGCTAGGTATACTGT+GGG | 0.653802 | 1_3:+46872243 | Msa0121240:intron |
CTTGTCGGAAGAACGTCCAA+GGG | 0.656049 | 1_3:-46874334 | None:intergenic |
ATCAACTACAGACCCTCTAG+AGG | 0.656438 | 1_3:+46875952 | Msa0121240:intron |
AGAATGTTTCTCTTGAAAGG+CGG | 0.656927 | 1_3:+46870955 | Msa0121240:CDS |
GGTCTTGTTCTGGTCCCTCG+GGG | 0.658058 | 1_3:+46875998 | Msa0121240:CDS |
TTTCAACTTTCAATTCAACA+AGG | 0.658064 | 1_3:+46868665 | Msa0121240:five_prime_UTR |
GGAGCGTGAATATATGCAAG+GGG | 0.659260 | 1_3:+46871091 | Msa0121240:CDS |
TCAGATGGTTGTGTATATGA+TGG | 0.660600 | 1_3:+46870261 | Msa0121240:CDS |
TATTTCCCATTACAACAAAG+CGG | 0.665063 | 1_3:-46874260 | None:intergenic |
CTACCATCATCTGCTCCCCG+AGG | 0.672666 | 1_3:-46876013 | None:intergenic |
TATGACGTCGTACTATACCT+GGG | 0.673057 | 1_3:+46876850 | Msa0121240:CDS |
GACACCTCCTCATCAGTCGG+AGG | 0.674116 | 1_3:+46872362 | Msa0121240:CDS |
GGCGAAGACTGAATCCGTTG+AGG | 0.675390 | 1_3:-46871030 | None:intergenic |
AGGCAAAGGAACCCTTACCT+GGG | 0.686161 | 1_3:+46870584 | Msa0121240:CDS |
GTACGACGTCATAAGCCTCG+TGG | 0.687876 | 1_3:-46876840 | None:intergenic |
TCGATCCAAACTACTAACTG+TGG | 0.690124 | 1_3:-46870058 | None:intergenic |
TGATTCGTTATCTATATCGG+CGG | 0.703435 | 1_3:+46876942 | Msa0121240:CDS |
GGGGCCAGGCAAGTATACCT+GGG | 0.703812 | 1_3:+46870515 | Msa0121240:CDS |
TCTGAACTTATACTAACAGG+AGG | 0.705844 | 1_3:-46875095 | None:intergenic |
TATGTTGGGACATGGACACG+GGG | 0.713292 | 1_3:+46870690 | Msa0121240:CDS |
GGGACCAGAACAAGACCTTG+AGG | 0.724705 | 1_3:-46875992 | None:intergenic |
CAATATATGATCCTGTACCG+TGG | 0.736323 | 1_3:-46870374 | None:intergenic |
GGATCCAAGGAAATCCTGAG+GGG | 0.751805 | 1_3:+46870496 | Msa0121240:CDS |
GGAAACTCAAATGTTCCACG+AGG | 0.778032 | 1_3:+46876825 | Msa0121240:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTATATGATATGAAT+GGG | + | chr1_3:46869823-46869842 | Msa0121240:intron | 10.0% |
!!! | AAGAAAATAATTTTTTTGTT+TGG | - | chr1_3:46874195-46874214 | None:intergenic | 10.0% |
!!! | AATAAAATATTTTCTTACAA+TGG | - | chr1_3:46874490-46874509 | None:intergenic | 10.0% |
!!! | AAGAATATTTTCTTATATAT+AGG | + | chr1_3:46874709-46874728 | Msa0121240:intron | 10.0% |
!!! | AATTCTAAAATCAAAAGTTA+CGG | + | chr1_3:46868884-46868903 | Msa0121240:intron | 15.0% |
!!! | ATTTAGTAATTTTTGTGTTA+TGG | + | chr1_3:46869054-46869073 | Msa0121240:intron | 15.0% |
!!! | TTTAGTAATTTTTGTGTTAT+GGG | + | chr1_3:46869055-46869074 | Msa0121240:intron | 15.0% |
!! | AAAAAATCATAAGAACTAAA+AGG | - | chr1_3:46869412-46869431 | None:intergenic | 15.0% |
!! | CATTCATATCATATAAAAAA+AGG | - | chr1_3:46869824-46869843 | None:intergenic | 15.0% |
!!! | CTTTTTTTATATGATATGAA+TGG | + | chr1_3:46869822-46869841 | Msa0121240:intron | 15.0% |
!!! | TAATTAACTTGAATTGTTAA+TGG | - | chr1_3:46871808-46871827 | None:intergenic | 15.0% |
!!! | CTTATACTTTTTTTTTTCTT+CGG | + | chr1_3:46871885-46871904 | Msa0121240:intron | 15.0% |
!! | AAAAAGAAATAAAGTAGATT+TGG | + | chr1_3:46872916-46872935 | Msa0121240:intron | 15.0% |
!!! | TAAGAAAATATTTTATTCCT+AGG | + | chr1_3:46874493-46874512 | Msa0121240:intron | 15.0% |
!!! | AAGAATCTTTTCTTATATAT+AGG | - | chr1_3:46874610-46874629 | None:intergenic | 15.0% |
!! | TTATTAAATTTGTACATTTG+AGG | + | chr1_3:46874747-46874766 | Msa0121240:intron | 15.0% |
!!! | TGAACATGTAAAATATTTTA+AGG | + | chr1_3:46874814-46874833 | Msa0121240:intron | 15.0% |
!!! | ATTTTGGATTTGTTTTATAT+TGG | + | chr1_3:46875681-46875700 | Msa0121240:intron | 15.0% |
!! | TATAATTGTAAAACTTTGAT+TGG | - | chr1_3:46875771-46875790 | None:intergenic | 15.0% |
!! | TTACAATTATATGATGATTA+TGG | + | chr1_3:46875780-46875799 | Msa0121240:intron | 15.0% |
!!! | ATCATTTTAGAAATTCTTAT+AGG | + | chr1_3:46875808-46875827 | Msa0121240:intron | 15.0% |
!!! | ACTTTTATGTTCATAAAATA+CGG | + | chr1_3:46876245-46876264 | Msa0121240:intron | 15.0% |
!! | AATTCTGAATAAAAATAATC+TGG | - | chr1_3:46877059-46877078 | None:intergenic | 15.0% |
!!! | TTTTTAAAGTCGTTTAAATC+AGG | - | chr1_3:46868862-46868881 | None:intergenic | 20.0% |
!! | AGTCAAAATCAATTAAATTC+TGG | + | chr1_3:46868920-46868939 | Msa0121240:intron | 20.0% |
!! | TATATAAAAAACAGAGTAGT+CGG | - | chr1_3:46869227-46869246 | None:intergenic | 20.0% |
!! | CAATATAATCATACACAAAA+TGG | - | chr1_3:46869382-46869401 | None:intergenic | 20.0% |
!!! | AGTTCAATTTCTTTTAGTTA+TGG | + | chr1_3:46869462-46869481 | Msa0121240:intron | 20.0% |
!!! | TGATTTTCTCAAATTATTAG+CGG | + | chr1_3:46869541-46869560 | Msa0121240:intron | 20.0% |
!! | TTATAGAATTATAACTATCC+CGG | - | chr1_3:46869997-46870016 | None:intergenic | 20.0% |
!! | TGGTTAAAAAACAAATATAG+GGG | - | chr1_3:46871701-46871720 | None:intergenic | 20.0% |
!! | GTGGTTAAAAAACAAATATA+GGG | - | chr1_3:46871702-46871721 | None:intergenic | 20.0% |
!! | TGTGGTTAAAAAACAAATAT+AGG | - | chr1_3:46871703-46871722 | None:intergenic | 20.0% |
!! | AAATAGTATTTGTTTGCTTA+AGG | - | chr1_3:46872026-46872045 | None:intergenic | 20.0% |
!!! | ACTTAATTTCTTCTAAAGTT+TGG | - | chr1_3:46872161-46872180 | None:intergenic | 20.0% |
!! | TAGAAGAAATTAAGTTATTC+TGG | + | chr1_3:46872166-46872185 | Msa0121240:intron | 20.0% |
!! | TTCTGTAAGTAACTTAAAAA+TGG | + | chr1_3:46872216-46872235 | Msa0121240:intron | 20.0% |
!! | TCTGTAAGTAACTTAAAAAT+GGG | + | chr1_3:46872217-46872236 | Msa0121240:intron | 20.0% |
!!! | AGGTTAGTTTAAACTTTTTT+AGG | + | chr1_3:46872420-46872439 | Msa0121240:intron | 20.0% |
!! | GGAAAATTATAGAAACAATA+TGG | - | chr1_3:46872634-46872653 | None:intergenic | 20.0% |
!!! | TAGAATTGTTTTTGTATACA+TGG | + | chr1_3:46872958-46872977 | Msa0121240:intron | 20.0% |
!! | ATATATAACAAGCATATGAA+AGG | - | chr1_3:46873037-46873056 | None:intergenic | 20.0% |
!!! | AATTTTCTATTCTAACTTCT+TGG | - | chr1_3:46873756-46873775 | None:intergenic | 20.0% |
!!! | AGATTTTTTGAATTAACTTG+TGG | + | chr1_3:46873789-46873808 | Msa0121240:intron | 20.0% |
!!! | CTTTTAAATCAAATCTTCTA+TGG | - | chr1_3:46874308-46874327 | None:intergenic | 20.0% |
!!! | CATAGAAGATTTGATTTAAA+AGG | + | chr1_3:46874306-46874325 | Msa0121240:CDS | 20.0% |
!!! | TATTTTCTTATATATAGGAC+CGG | + | chr1_3:46874714-46874733 | Msa0121240:intron | 20.0% |
!! | AAACTTGAAATTCAAACAAA+TGG | - | chr1_3:46874887-46874906 | None:intergenic | 20.0% |
!! | AATAAATGTCAATCACATAA+AGG | - | chr1_3:46875188-46875207 | None:intergenic | 20.0% |
!!! | ATAAAATGCTTTTGTGAAAA+AGG | - | chr1_3:46875429-46875448 | None:intergenic | 20.0% |
!!! | TAAGAATTTCTAAAATGATG+TGG | - | chr1_3:46875807-46875826 | None:intergenic | 20.0% |
!! | TTATCTGGTTATCTATAATT+TGG | + | chr1_3:46875832-46875851 | Msa0121240:intron | 20.0% |
!! | TTGTTATAGCACTATAATTA+TGG | + | chr1_3:46875902-46875921 | Msa0121240:intron | 20.0% |
!!! | CTTTTATGTTCATAAAATAC+GGG | + | chr1_3:46876246-46876265 | Msa0121240:intron | 20.0% |
!! | ATATTCTAGCAACTATTTAA+TGG | - | chr1_3:46876703-46876722 | None:intergenic | 20.0% |
!!! | TTTTATTCAGAATTTGTGAA+CGG | + | chr1_3:46877065-46877084 | Msa0121240:three_prime_UTR | 20.0% |
!! | GTTTCGTTTTGTATTCTAAT+CGG | - | chr1_3:46868512-46868531 | None:intergenic | 25.0% |
! | TTTCAACTTTCAATTCAACA+AGG | + | chr1_3:46868665-46868684 | Msa0121240:five_prime_UTR | 25.0% |
! | ATATTTAGAGAGAGAAAAAG+AGG | - | chr1_3:46868699-46868718 | None:intergenic | 25.0% |
! | CAAAATCAATTAAATTCTGG+AGG | + | chr1_3:46868923-46868942 | Msa0121240:intron | 25.0% |
! | TGCATTCACATTATATTGAT+CGG | - | chr1_3:46869003-46869022 | None:intergenic | 25.0% |
! | TTTGTTTGTTTCAATCATGA+CGG | + | chr1_3:46869130-46869149 | Msa0121240:intron | 25.0% |
! | TGTTCAATATAAAGACTTTC+AGG | + | chr1_3:46869325-46869344 | Msa0121240:intron | 25.0% |
!!! | TATAAAGACTTTCAGGTTTA+TGG | + | chr1_3:46869332-46869351 | Msa0121240:intron | 25.0% |
! | ATAATCATACACAAAATGGA+AGG | - | chr1_3:46869378-46869397 | None:intergenic | 25.0% |
!!! | TCAATTTCTTTTAGTTATGG+TGG | + | chr1_3:46869465-46869484 | Msa0121240:intron | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | - | chr1_3:46869516-46869535 | None:intergenic | 25.0% |
! | ATGATGATAGGAAAATAAGT+GGG | - | chr1_3:46869790-46869809 | None:intergenic | 25.0% |
! | GGGATAGTTATAATTCTATA+AGG | + | chr1_3:46869996-46870015 | Msa0121240:five_prime_UTR | 25.0% |
! | CGTTTGTCAATATAGATATA+GGG | - | chr1_3:46870116-46870135 | None:intergenic | 25.0% |
! | CCTATATCTATATTGACAAA+CGG | + | chr1_3:46870114-46870133 | Msa0121240:CDS | 25.0% |
! | GTATATTTGGGAAATATGAA+AGG | + | chr1_3:46870549-46870568 | Msa0121240:CDS | 25.0% |
! | AAATTGCCAAAGATATCAAA+AGG | + | chr1_3:46871186-46871205 | Msa0121240:CDS | 25.0% |
!! | TTCTTATGGGAATTTTCATA+TGG | + | chr1_3:46871447-46871466 | Msa0121240:intron | 25.0% |
! | AGAAATGTGGTTATTGAAAA+TGG | + | chr1_3:46871727-46871746 | Msa0121240:intron | 25.0% |
! | GAAATGTGGTTATTGAAAAT+GGG | + | chr1_3:46871728-46871747 | Msa0121240:intron | 25.0% |
!! | GCTTTGAATATCAGTAATTA+TGG | + | chr1_3:46871846-46871865 | Msa0121240:intron | 25.0% |
!!! | AATGGAATATCTTGCTTTTT+GGG | - | chr1_3:46871960-46871979 | None:intergenic | 25.0% |
!!! | AAATGGAATATCTTGCTTTT+TGG | - | chr1_3:46871961-46871980 | None:intergenic | 25.0% |
! | TATTCCATTTCATTTCCTAT+TGG | + | chr1_3:46871971-46871990 | Msa0121240:intron | 25.0% |
! | ATTCCATTTCATTTCCTATT+GGG | + | chr1_3:46871972-46871991 | Msa0121240:intron | 25.0% |
! | TTATTCCTATTAATGACATG+AGG | + | chr1_3:46872105-46872124 | Msa0121240:intron | 25.0% |
!!! | TTTGGTTCTTTCATTGTATA+TGG | - | chr1_3:46872134-46872153 | None:intergenic | 25.0% |
!!! | TATCAATATTTGCTTTTGCA+TGG | + | chr1_3:46872191-46872210 | Msa0121240:intron | 25.0% |
!! | AATTCAGTAGTTACTTTAAG+AGG | - | chr1_3:46872603-46872622 | None:intergenic | 25.0% |
!!! | TTGTTTTTGTATACATGGTA+AGG | + | chr1_3:46872963-46872982 | Msa0121240:intron | 25.0% |
! | TATTGATATACAAACTTCCT+TGG | + | chr1_3:46873293-46873312 | Msa0121240:intron | 25.0% |
!! | TTCCATATTTCATTTTACCT+GGG | + | chr1_3:46873339-46873358 | Msa0121240:intron | 25.0% |
!! | TTTTTCATATGTACATGATC+CGG | + | chr1_3:46873574-46873593 | Msa0121240:intron | 25.0% |
! | CATGAAGATGTAATAATGAT+AGG | - | chr1_3:46874172-46874191 | None:intergenic | 25.0% |
! | TAAATTACTTTGTTGAAGGA+GGG | - | chr1_3:46874543-46874562 | None:intergenic | 25.0% |
!! | GTTCTAAATTACTTTGTTGA+AGG | - | chr1_3:46874547-46874566 | None:intergenic | 25.0% |
!! | TCTTTTCTTATATATAGGAC+CGG | - | chr1_3:46874605-46874624 | None:intergenic | 25.0% |
! | ATTTAATAATATACTCCCTC+CGG | - | chr1_3:46874736-46874755 | None:intergenic | 25.0% |
! | GAAAGCTAATGTTTAGTAAT+TGG | + | chr1_3:46875162-46875181 | Msa0121240:intron | 25.0% |
! | ATGTGATTGACATTTATTTC+TGG | + | chr1_3:46875190-46875209 | Msa0121240:intron | 25.0% |
!! | GATATAAACACTGCTTATTT+TGG | + | chr1_3:46875313-46875332 | Msa0121240:intron | 25.0% |
!!! | CTGCTTATTTTGGTATTATT+AGG | + | chr1_3:46875323-46875342 | Msa0121240:intron | 25.0% |
!! | GATGTAAAAGAAAGATTTTC+TGG | - | chr1_3:46875382-46875401 | None:intergenic | 25.0% |
! | GATTGTTTATTAACATGAGA+TGG | + | chr1_3:46875466-46875485 | Msa0121240:intron | 25.0% |
!!! | AAATGTTAGGAGCTATTTTT+AGG | + | chr1_3:46875522-46875541 | Msa0121240:intron | 25.0% |
!! | TCTAATTATGTCTTGCATTT+TGG | + | chr1_3:46875665-46875684 | Msa0121240:intron | 25.0% |
!!! | TTTTTTCCTTCTAACTGAAA+CGG | + | chr1_3:46875705-46875724 | Msa0121240:intron | 25.0% |
! | GTAATTCTTCATGAGTTTAA+TGG | + | chr1_3:46876129-46876148 | Msa0121240:intron | 25.0% |
! | ACATGTACACATTTAAAAGT+AGG | - | chr1_3:46876492-46876511 | None:intergenic | 25.0% |
!! | ACTTGGGATTATATTGATTA+AGG | + | chr1_3:46876656-46876675 | Msa0121240:intron | 25.0% |
!! | GTTTGATTCGTTATCTATAT+CGG | + | chr1_3:46876939-46876958 | Msa0121240:CDS | 25.0% |
! | AGAATAAAGTCAAGTGTTGT+AGG | - | chr1_3:46868640-46868659 | None:intergenic | 30.0% |
TCTGACAAAAAGTTAGTTGA+CGG | + | chr1_3:46868819-46868838 | Msa0121240:intron | 30.0% | |
TGGTCTGTCATATTTACAAT+CGG | + | chr1_3:46869630-46869649 | Msa0121240:intron | 30.0% | |
GATGATGATAGGAAAATAAG+TGG | - | chr1_3:46869791-46869810 | None:intergenic | 30.0% | |
GCATAAACAAAGATGATGAT+AGG | - | chr1_3:46869802-46869821 | None:intergenic | 30.0% | |
! | ACTTTTCTTTTGTAGCCAAA+AGG | + | chr1_3:46869897-46869916 | Msa0121240:intron | 30.0% |
AGACATGCATAATGATCAAA+AGG | - | chr1_3:46870028-46870047 | None:intergenic | 30.0% | |
! | TTTTGATCATTATGCATGTC+TGG | + | chr1_3:46870027-46870046 | Msa0121240:exon | 30.0% |
CCGTTTGTCAATATAGATAT+AGG | - | chr1_3:46870117-46870136 | None:intergenic | 30.0% | |
!!! | AAATTGCTGGTTTTAGAGTA+GGG | + | chr1_3:46870157-46870176 | Msa0121240:CDS | 30.0% |
ATGGATTTGGGAAAATACAA+TGG | + | chr1_3:46870307-46870326 | Msa0121240:CDS | 30.0% | |
! | TTGGATAAACTTGATAACCT+AGG | - | chr1_3:46870452-46870471 | None:intergenic | 30.0% |
GGTTATCAAGTTTATCCAAA+TGG | + | chr1_3:46870453-46870472 | Msa0121240:CDS | 30.0% | |
CCTTCAAATATATCTCCATT+TGG | - | chr1_3:46870471-46870490 | None:intergenic | 30.0% | |
CCAAATGGAGATATATTTGA+AGG | + | chr1_3:46870468-46870487 | Msa0121240:CDS | 30.0% | |
GCTAACGGAAATGTATATTT+GGG | + | chr1_3:46870537-46870556 | Msa0121240:CDS | 30.0% | |
TATTTGGGAAATATGAAAGG+TGG | + | chr1_3:46870552-46870571 | Msa0121240:CDS | 30.0% | |
ATTTGGGAAATATGAAAGGT+GGG | + | chr1_3:46870553-46870572 | Msa0121240:CDS | 30.0% | |
! | AAAGGAACCTTTTATCCAAA+AGG | + | chr1_3:46870726-46870745 | Msa0121240:CDS | 30.0% |
TCAATGCATTGAGAAAAAGA+GGG | + | chr1_3:46870781-46870800 | Msa0121240:CDS | 30.0% | |
! | TGATTCTGTTTTCTCAAATC+TGG | - | chr1_3:46870813-46870832 | None:intergenic | 30.0% |
AGATTTGAGAAAACAGAATC+AGG | + | chr1_3:46870812-46870831 | Msa0121240:CDS | 30.0% | |
! | GTTAACCTCTTTATTTCCAT+CGG | - | chr1_3:46871054-46871073 | None:intergenic | 30.0% |
ATATATTCACGCTCCAAAAT+GGG | - | chr1_3:46871086-46871105 | None:intergenic | 30.0% | |
!! | CCTTTAATAATTTGTTCACC+GGG | - | chr1_3:46871212-46871231 | None:intergenic | 30.0% |
!! | GCCTTTAATAATTTGTTCAC+CGG | - | chr1_3:46871213-46871232 | None:intergenic | 30.0% |
AACAAATTATTAAAGGCCAC+AGG | + | chr1_3:46871216-46871235 | Msa0121240:CDS | 30.0% | |
TAAGGTAAAAGATACTGTCT+TGG | + | chr1_3:46871273-46871292 | Msa0121240:intron | 30.0% | |
! | AGGAGGTCATAATTTTCTTA+TGG | + | chr1_3:46871433-46871452 | Msa0121240:intron | 30.0% |
! | GGAGGTCATAATTTTCTTAT+GGG | + | chr1_3:46871434-46871453 | Msa0121240:intron | 30.0% |
! | TCAGACAGTTTTTATGTTCA+CGG | + | chr1_3:46871499-46871518 | Msa0121240:intron | 30.0% |
!! | ATTCTTTACAGTTGGTAACA+AGG | - | chr1_3:46871542-46871561 | None:intergenic | 30.0% |
TACCAACTGTAAAGAATAGA+AGG | + | chr1_3:46871545-46871564 | Msa0121240:intron | 30.0% | |
ACCAACTGTAAAGAATAGAA+GGG | + | chr1_3:46871546-46871565 | Msa0121240:intron | 30.0% | |
AAAACCTCAATCTCTTTAAG+AGG | - | chr1_3:46871580-46871599 | None:intergenic | 30.0% | |
! | CTTAAAGAGATTGAGGTTTT+AGG | + | chr1_3:46871580-46871599 | Msa0121240:intron | 30.0% |
CAAAGCAAAATATAGCTCAA+AGG | - | chr1_3:46871628-46871647 | None:intergenic | 30.0% | |
AATCACTAAATTGTCACTCA+TGG | + | chr1_3:46871649-46871668 | Msa0121240:intron | 30.0% | |
ATCACTAAATTGTCACTCAT+GGG | + | chr1_3:46871650-46871669 | Msa0121240:intron | 30.0% | |
GGATTCAAGAAAAAAGAATG+TGG | + | chr1_3:46871671-46871690 | Msa0121240:intron | 30.0% | |
TTAACCACAGAAAAGAAATG+TGG | + | chr1_3:46871714-46871733 | Msa0121240:intron | 30.0% | |
! | ATAACCACATTTCTTTTCTG+TGG | - | chr1_3:46871721-46871740 | None:intergenic | 30.0% |
!!! | ATGGAATATCTTGCTTTTTG+GGG | - | chr1_3:46871959-46871978 | None:intergenic | 30.0% |
ATTCCCAATAGGAAATGAAA+TGG | - | chr1_3:46871978-46871997 | None:intergenic | 30.0% | |
TGTTATAGTAGAACTAACAC+AGG | + | chr1_3:46872069-46872088 | Msa0121240:intron | 30.0% | |
!! | CTTCTAAAGTTTGGTACATT+TGG | - | chr1_3:46872152-46872171 | None:intergenic | 30.0% |
! | ACTTAAAAATGGGCTTCAAA+TGG | + | chr1_3:46872227-46872246 | Msa0121240:intron | 30.0% |
! | TGGATGAATTTTCCTAAAGA+AGG | + | chr1_3:46872330-46872349 | Msa0121240:CDS | 30.0% |
TGATTTAGTAAAGCAAGGAT+TGG | - | chr1_3:46872507-46872526 | None:intergenic | 30.0% | |
TGTAGTGATTTAGTAAAGCA+AGG | - | chr1_3:46872512-46872531 | None:intergenic | 30.0% | |
TTTCTAATATCAGAACACTG+AGG | - | chr1_3:46872655-46872674 | None:intergenic | 30.0% | |
! | GTAGGTATTGCAATTTGAAA+TGG | - | chr1_3:46872730-46872749 | None:intergenic | 30.0% |
AATACCTACTTGACAACTTA+AGG | + | chr1_3:46872741-46872760 | Msa0121240:intron | 30.0% | |
ACTTAAGGTGAATACAAGAA+TGG | + | chr1_3:46872756-46872775 | Msa0121240:intron | 30.0% | |
AAGACATGTAGATTTCATGT+TGG | + | chr1_3:46872822-46872841 | Msa0121240:intron | 30.0% | |
!!! | GTAAAGGTGTGTTTATTTTG+TGG | + | chr1_3:46873237-46873256 | Msa0121240:intron | 30.0% |
! | GTTCCATATTTCATTTTACC+TGG | + | chr1_3:46873338-46873357 | Msa0121240:intron | 30.0% |
! | AAGTATGTCATTGATAACCA+AGG | - | chr1_3:46873380-46873399 | None:intergenic | 30.0% |
TCAATGACATACTTGCAAAA+AGG | + | chr1_3:46873386-46873405 | Msa0121240:intron | 30.0% | |
CAATGACATACTTGCAAAAA+GGG | + | chr1_3:46873387-46873406 | Msa0121240:intron | 30.0% | |
AATGACATACTTGCAAAAAG+GGG | + | chr1_3:46873388-46873407 | Msa0121240:intron | 30.0% | |
CGTAACTTATGTAAGAATGA+TGG | - | chr1_3:46873528-46873547 | None:intergenic | 30.0% | |
! | TGCATTTAAGTTAATGAAGC+AGG | - | chr1_3:46873553-46873572 | None:intergenic | 30.0% |
GAATATCATCCAAGTTAATG+AGG | - | chr1_3:46873685-46873704 | None:intergenic | 30.0% | |
AGAACCTACATTTCAGATTA+TGG | - | chr1_3:46873899-46873918 | None:intergenic | 30.0% | |
!!! | ACACTCGTTACAAAGTTTTT+TGG | + | chr1_3:46873968-46873987 | Msa0121240:CDS | 30.0% |
TATTTCCCATTACAACAAAG+CGG | - | chr1_3:46874263-46874282 | None:intergenic | 30.0% | |
GAATACCACTCTTAAAGATT+TGG | + | chr1_3:46874371-46874390 | Msa0121240:CDS | 30.0% | |
! | CAAATCCAAATCTTTAAGAG+TGG | - | chr1_3:46874379-46874398 | None:intergenic | 30.0% |
!! | TTTGAACTACTGCTTTTACT+TGG | + | chr1_3:46874395-46874414 | Msa0121240:CDS | 30.0% |
GGGAGTCTTTATTAAAGTAA+GGG | + | chr1_3:46874430-46874449 | Msa0121240:intron | 30.0% | |
GGAGTCTTTATTAAAGTAAG+GGG | + | chr1_3:46874431-46874450 | Msa0121240:intron | 30.0% | |
CTAAATTACTTTGTTGAAGG+AGG | - | chr1_3:46874544-46874563 | None:intergenic | 30.0% | |
TAGTATAAGTTCAGATGGTT+TGG | + | chr1_3:46875103-46875122 | Msa0121240:CDS | 30.0% | |
! | TTGTGTGTTTTACCTAAAGT+TGG | + | chr1_3:46875224-46875243 | Msa0121240:intron | 30.0% |
CTAAAGTTGGCATATATCAT+CGG | + | chr1_3:46875237-46875256 | Msa0121240:intron | 30.0% | |
! | TTTTGTGAAAAAGGTCAGAT+GGG | - | chr1_3:46875420-46875439 | None:intergenic | 30.0% |
TAACATGAGATGGATATGAA+TGG | + | chr1_3:46875476-46875495 | Msa0121240:intron | 30.0% | |
ATTCCTGCTTGAAAAATGTT+AGG | + | chr1_3:46875509-46875528 | Msa0121240:intron | 30.0% | |
AACCAATCAGCATGTTTAAT+TGG | - | chr1_3:46875613-46875632 | None:intergenic | 30.0% | |
! | TTTTTCCTTCTAACTGAAAC+GGG | + | chr1_3:46875706-46875725 | Msa0121240:intron | 30.0% |
GAAATTCTTATAGGCTTATC+TGG | + | chr1_3:46875817-46875836 | Msa0121240:intron | 30.0% | |
TATATACTTCATCCTCTAGA+GGG | - | chr1_3:46875967-46875986 | None:intergenic | 30.0% | |
TTATATACTTCATCCTCTAG+AGG | - | chr1_3:46875968-46875987 | None:intergenic | 30.0% | |
GAAGTATATAACTATCCTCA+AGG | + | chr1_3:46875977-46875996 | Msa0121240:CDS | 30.0% | |
GCTATGATCACACTAATAAT+AGG | - | chr1_3:46876207-46876226 | None:intergenic | 30.0% | |
TTATGTTCATAAAATACGGG+CGG | + | chr1_3:46876249-46876268 | Msa0121240:intron | 30.0% | |
TAAATATACGAGAGCTTGAA+CGG | - | chr1_3:46876424-46876443 | None:intergenic | 30.0% | |
!!! | ATTTTTTTCATGCAGAAGTG+TGG | - | chr1_3:46876566-46876585 | None:intergenic | 30.0% |
! | AACAATCTAGCTATTTCACT+TGG | + | chr1_3:46876639-46876658 | Msa0121240:intron | 30.0% |
! | ACAATCTAGCTATTTCACTT+GGG | + | chr1_3:46876640-46876659 | Msa0121240:intron | 30.0% |
ACTATTTAATGGTGCACTAA+AGG | - | chr1_3:46876692-46876711 | None:intergenic | 30.0% | |
!! | TGCTAGAATATTTTAGACTG+AGG | + | chr1_3:46876712-46876731 | Msa0121240:intron | 30.0% |
!! | GCTAGAATATTTTAGACTGA+GGG | + | chr1_3:46876713-46876732 | Msa0121240:intron | 30.0% |
AAGATTACAACATGACTAAG+AGG | + | chr1_3:46876890-46876909 | Msa0121240:CDS | 30.0% | |
AAGTTACTCAAACTTTATCC+TGG | - | chr1_3:46877033-46877052 | None:intergenic | 30.0% | |
CAAAACGAAACGAAACTCAT+TGG | + | chr1_3:46868521-46868540 | Msa0121240:five_prime_UTR | 35.0% | |
! | TAAAGTCAAGTGTTGTAGGT+GGG | - | chr1_3:46868636-46868655 | None:intergenic | 35.0% |
! | ATAAAGTCAAGTGTTGTAGG+TGG | - | chr1_3:46868637-46868656 | None:intergenic | 35.0% |
! | GTAATTATATGTGTCGGTGT+CGG | - | chr1_3:46869510-46869529 | None:intergenic | 35.0% |
TCTCAAATTATTAGCGGTGT+CGG | + | chr1_3:46869547-46869566 | Msa0121240:intron | 35.0% | |
ACATCTATGAAGCACAGATA+CGG | - | chr1_3:46869608-46869627 | None:intergenic | 35.0% | |
TGTCATATTTACAATCGGCT+TGG | + | chr1_3:46869635-46869654 | Msa0121240:intron | 35.0% | |
!! | TATTTACAATCGGCTTGGTT+TGG | + | chr1_3:46869640-46869659 | Msa0121240:intron | 35.0% |
CCAAAAGGACAAAGTTTCAA+GGG | + | chr1_3:46869912-46869931 | Msa0121240:five_prime_UTR | 35.0% | |
! | TCTAAAACCAGCAATTTCAG+TGG | - | chr1_3:46870154-46870173 | None:intergenic | 35.0% |
!!! | GAAATTGCTGGTTTTAGAGT+AGG | + | chr1_3:46870156-46870175 | Msa0121240:CDS | 35.0% |
!!! | AATTGCTGGTTTTAGAGTAG+GGG | + | chr1_3:46870158-46870177 | Msa0121240:CDS | 35.0% |
TCAGATGGTTGTGTATATGA+TGG | + | chr1_3:46870261-46870280 | Msa0121240:CDS | 35.0% | |
TTGTATGAAGGTGAATTCTC+TGG | + | chr1_3:46870342-46870361 | Msa0121240:CDS | 35.0% | |
TGGCGATTCAATCTTAAACA+TGG | + | chr1_3:46870426-46870445 | Msa0121240:CDS | 35.0% | |
TTCAATCTTAAACATGGCCT+AGG | + | chr1_3:46870432-46870451 | Msa0121240:CDS | 35.0% | |
GAGATATATTTGAAGGCTCT+TGG | + | chr1_3:46870475-46870494 | Msa0121240:CDS | 35.0% | |
GGCTAACGGAAATGTATATT+TGG | + | chr1_3:46870536-46870555 | Msa0121240:CDS | 35.0% | |
TTTGAAGGAAGCTGGTTAAA+TGG | + | chr1_3:46870621-46870640 | Msa0121240:CDS | 35.0% | |
TGGTTAAATGGTATGATGCA+TGG | + | chr1_3:46870633-46870652 | Msa0121240:CDS | 35.0% | |
! | ACAGCTTCCTTTTGGATAAA+AGG | - | chr1_3:46870736-46870755 | None:intergenic | 35.0% |
AGATATACTTCTTGTGCAGA+TGG | - | chr1_3:46870762-46870781 | None:intergenic | 35.0% | |
CTCAATGCATTGAGAAAAAG+AGG | + | chr1_3:46870780-46870799 | Msa0121240:CDS | 35.0% | |
! | TAACACTGCTTCAGTTGATA+TGG | + | chr1_3:46870845-46870864 | Msa0121240:CDS | 35.0% |
! | AACACTGCTTCAGTTGATAT+GGG | + | chr1_3:46870846-46870865 | Msa0121240:CDS | 35.0% |
GATATGGGAAATGCTAGATT+TGG | + | chr1_3:46870861-46870880 | Msa0121240:CDS | 35.0% | |
CACAGAAAACCTGTTAAATC+TGG | + | chr1_3:46870917-46870936 | Msa0121240:CDS | 35.0% | |
GAGATTGATCCAGATTTAAC+AGG | - | chr1_3:46870929-46870948 | None:intergenic | 35.0% | |
GCAAGAATGTTTCTCTTGAA+AGG | + | chr1_3:46870952-46870971 | Msa0121240:CDS | 35.0% | |
AGAATGTTTCTCTTGAAAGG+CGG | + | chr1_3:46870955-46870974 | Msa0121240:CDS | 35.0% | |
GTAGCTATTGAGAAAGTGAT+TGG | + | chr1_3:46870990-46871009 | Msa0121240:CDS | 35.0% | |
TGATTCACAATTTGCCTCAA+CGG | + | chr1_3:46871016-46871035 | Msa0121240:CDS | 35.0% | |
! | TAACGAAAAGATCCCCATTT+TGG | + | chr1_3:46871070-46871089 | Msa0121240:CDS | 35.0% |
TATATTCACGCTCCAAAATG+GGG | - | chr1_3:46871085-46871104 | None:intergenic | 35.0% | |
CATATATTCACGCTCCAAAA+TGG | - | chr1_3:46871087-46871106 | None:intergenic | 35.0% | |
CCCGGTGAACAAATTATTAA+AGG | + | chr1_3:46871209-46871228 | Msa0121240:CDS | 35.0% | |
CAAGATGAATCCATGTTAGA+AGG | + | chr1_3:46871413-46871432 | Msa0121240:intron | 35.0% | |
ATTATGACCTCCTTCTAACA+TGG | - | chr1_3:46871426-46871445 | None:intergenic | 35.0% | |
TCCCTTCTATTCTTTACAGT+TGG | - | chr1_3:46871550-46871569 | None:intergenic | 35.0% | |
AATGCCTCTTAAAGAGATTG+AGG | + | chr1_3:46871573-46871592 | Msa0121240:intron | 35.0% | |
!!! | TGGAATATCTTGCTTTTTGG+GGG | - | chr1_3:46871958-46871977 | None:intergenic | 35.0% |
! | ATTCATCCAAAAGCTTGCTT+TGG | - | chr1_3:46872319-46872338 | None:intergenic | 35.0% |
GTCAATTGAGAACCTTCTTT+AGG | - | chr1_3:46872345-46872364 | None:intergenic | 35.0% | |
! | ATCAGTCGGAGGATTTTAAA+TGG | + | chr1_3:46872373-46872392 | Msa0121240:CDS | 35.0% |
AAACTAACCTGAACACCATA+GGG | - | chr1_3:46872410-46872429 | None:intergenic | 35.0% | |
TAAACTAACCTGAACACCAT+AGG | - | chr1_3:46872411-46872430 | None:intergenic | 35.0% | |
! | TTCACCTTAAGTTGTCAAGT+AGG | - | chr1_3:46872748-46872767 | None:intergenic | 35.0% |
CACATCACATCATACATTAG+AGG | - | chr1_3:46872872-46872891 | None:intergenic | 35.0% | |
AATTTCTGCAAAAGGTCACA+AGG | - | chr1_3:46873062-46873081 | None:intergenic | 35.0% | |
CTCTCTCAAATTTCTGCAAA+AGG | - | chr1_3:46873070-46873089 | None:intergenic | 35.0% | |
! | CAAAGCATCATTTCCACAAA+TGG | - | chr1_3:46873127-46873146 | None:intergenic | 35.0% |
! | TAGTGTCTTTTTCTTGTCTC+AGG | + | chr1_3:46873176-46873195 | Msa0121240:CDS | 35.0% |
TCAGTGTCTTGATCATGAAA+CGG | - | chr1_3:46873206-46873225 | None:intergenic | 35.0% | |
ACTGAGAAGATCAGAAGTAA+AGG | + | chr1_3:46873221-46873240 | Msa0121240:CDS | 35.0% | |
TGATATACAAACTTCCTTGG+AGG | + | chr1_3:46873296-46873315 | Msa0121240:intron | 35.0% | |
CACCCAGGTAAAATGAAATA+TGG | - | chr1_3:46873344-46873363 | None:intergenic | 35.0% | |
TATTGTCTGCCTCATTAACT+TGG | + | chr1_3:46873673-46873692 | Msa0121240:intron | 35.0% | |
! | GTGACCATAATCTGAAATGT+AGG | + | chr1_3:46873892-46873911 | Msa0121240:intron | 35.0% |
!!! | CAAAGTTTTTTGGTTTGCAC+AGG | + | chr1_3:46873978-46873997 | Msa0121240:CDS | 35.0% |
! | GATAAACGAGCATTACCTTT+TGG | - | chr1_3:46874021-46874040 | None:intergenic | 35.0% |
ATATGTTCTGCACAGAATTG+AGG | + | chr1_3:46874280-46874299 | Msa0121240:CDS | 35.0% | |
GATTTAAAAGGTTCATCCCT+TGG | + | chr1_3:46874318-46874337 | Msa0121240:CDS | 35.0% | |
!! | CTCATCGATTTCTATCTTGT+CGG | - | chr1_3:46874352-46874371 | None:intergenic | 35.0% |
CGGGAGTCTTTATTAAAGTA+AGG | + | chr1_3:46874429-46874448 | Msa0121240:intron | 35.0% | |
! | TTTTATTCCTAGGAACACAG+AGG | + | chr1_3:46874503-46874522 | Msa0121240:intron | 35.0% |
TTCTTATATATAGGACCGGA+GGG | - | chr1_3:46874718-46874737 | None:intergenic | 35.0% | |
TTTCTTATATATAGGACCGG+AGG | - | chr1_3:46874717-46874736 | None:intergenic | 35.0% | |
TTTCTTATATATAGGACCGG+AGG | + | chr1_3:46874717-46874736 | Msa0121240:intron | 35.0% | |
TTCTTATATATAGGACCGGA+GGG | + | chr1_3:46874718-46874737 | Msa0121240:intron | 35.0% | |
! | ATGGACTATAGTCTTCTTCT+AGG | + | chr1_3:46875041-46875060 | Msa0121240:CDS | 35.0% |
TCTGAACTTATACTAACAGG+AGG | - | chr1_3:46875098-46875117 | None:intergenic | 35.0% | |
CCATCTGAACTTATACTAAC+AGG | - | chr1_3:46875101-46875120 | None:intergenic | 35.0% | |
CCTGTTAGTATAAGTTCAGA+TGG | + | chr1_3:46875098-46875117 | Msa0121240:CDS | 35.0% | |
CGATGATATATGCCAACTTT+AGG | - | chr1_3:46875239-46875258 | None:intergenic | 35.0% | |
TTTAGATGATGAGATCTACG+AGG | + | chr1_3:46875349-46875368 | Msa0121240:intron | 35.0% | |
TTAGATGATGAGATCTACGA+GGG | + | chr1_3:46875350-46875369 | Msa0121240:intron | 35.0% | |
! | CTTTTGTGAAAAAGGTCAGA+TGG | - | chr1_3:46875421-46875440 | None:intergenic | 35.0% |
AGGACCAATGTTGTAAAATC+TGG | + | chr1_3:46875542-46875561 | Msa0121240:intron | 35.0% | |
ATGTTTAATTGGACCAGCAA+AGG | - | chr1_3:46875602-46875621 | None:intergenic | 35.0% | |
GTCCAATTAAACATGCTGAT+TGG | + | chr1_3:46875608-46875627 | Msa0121240:intron | 35.0% | |
! | ACAGTGCTGCTAAGTTAAAA+GGG | - | chr1_3:46875646-46875665 | None:intergenic | 35.0% |
GAGCTCTTGAATTGAGTATT+CGG | + | chr1_3:46875734-46875753 | Msa0121240:intron | 35.0% | |
TCTTGAATTGAGTATTCGGT+TGG | + | chr1_3:46875738-46875757 | Msa0121240:intron | 35.0% | |
CACACTAATAATAGGATAGC+TGG | - | chr1_3:46876199-46876218 | None:intergenic | 35.0% | |
AGAGTAGTTTATGTTCTGCT+AGG | + | chr1_3:46876310-46876329 | Msa0121240:intron | 35.0% | |
GAGTAGTTTATGTTCTGCTA+GGG | + | chr1_3:46876311-46876330 | Msa0121240:intron | 35.0% | |
!! | ATTTGAGTTTCCTCTTTTCC+TGG | - | chr1_3:46876817-46876836 | None:intergenic | 35.0% |
GCAATATATCAATGATACCC+AGG | - | chr1_3:46876870-46876889 | None:intergenic | 35.0% | |
TGATTCGTTATCTATATCGG+CGG | + | chr1_3:46876942-46876961 | Msa0121240:CDS | 35.0% | |
ACACTTTCTGGATAAAATCC+AGG | - | chr1_3:46876996-46877015 | None:intergenic | 35.0% | |
TTTATCCTGGCACATTTGAT+GGG | - | chr1_3:46877020-46877039 | None:intergenic | 35.0% | |
GGAAAACGAGTAGCGAAATT+TGG | + | chr1_3:46868542-46868561 | Msa0121240:five_prime_UTR | 40.0% | |
TAGTCAAAACCGAACCAAAC+TGG | + | chr1_3:46869733-46869752 | Msa0121240:intron | 40.0% | |
ACTAAAGTACGACTGTTCGT+GGG | - | chr1_3:46869759-46869778 | None:intergenic | 40.0% | |
GCCAAAAGGACAAAGTTTCA+AGG | + | chr1_3:46869911-46869930 | Msa0121240:intron | 40.0% | |
! | CCCTTGAAACTTTGTCCTTT+TGG | - | chr1_3:46869915-46869934 | None:intergenic | 40.0% |
AGTTTCAAGGGTCAATCACT+TGG | + | chr1_3:46869924-46869943 | Msa0121240:five_prime_UTR | 40.0% | |
AGACAAGAATGGTTGCAGAT+AGG | - | chr1_3:46869958-46869977 | None:intergenic | 40.0% | |
CAACAGCTACAAGACAAGAA+TGG | - | chr1_3:46869969-46869988 | None:intergenic | 40.0% | |
TCTTGTAGCTGTTGAGAATC+CGG | + | chr1_3:46869975-46869994 | Msa0121240:five_prime_UTR | 40.0% | |
TCGATCCAAACTACTAACTG+TGG | - | chr1_3:46870061-46870080 | None:intergenic | 40.0% | |
GGTAAGTATGTATGGTCAGA+TGG | + | chr1_3:46870246-46870265 | Msa0121240:CDS | 40.0% | |
! | GTTGTGTATATGATGGTGAG+TGG | + | chr1_3:46870268-46870287 | Msa0121240:CDS | 40.0% |
! | TATATGATGGTGAGTGGAGA+CGG | + | chr1_3:46870274-46870293 | Msa0121240:CDS | 40.0% |
TATGAAGGTGAATTCTCTGG+TGG | + | chr1_3:46870345-46870364 | Msa0121240:CDS | 40.0% | |
CAATATATGATCCTGTACCG+TGG | - | chr1_3:46870377-46870396 | None:intergenic | 40.0% | |
CACGGTACAGGATCATATAT+TGG | + | chr1_3:46870375-46870394 | Msa0121240:CDS | 40.0% | |
CTTTGTAGGTCAGACTTTCT+GGG | - | chr1_3:46870401-46870420 | None:intergenic | 40.0% | |
ATATACATTTCCGTTAGCCC+AGG | - | chr1_3:46870535-46870554 | None:intergenic | 40.0% | |
AATGGTATGATGCATGGTCT+TGG | + | chr1_3:46870639-46870658 | Msa0121240:CDS | 40.0% | |
TTGGAGCGTGAATATATGCA+AGG | + | chr1_3:46871089-46871108 | Msa0121240:CDS | 40.0% | |
TGGAGCGTGAATATATGCAA+GGG | + | chr1_3:46871090-46871109 | Msa0121240:CDS | 40.0% | |
!! | GCAAGGGGTATTAATAAGTG+AGG | + | chr1_3:46871106-46871125 | Msa0121240:CDS | 40.0% |
!! | TTAGTTTGCAGCTCGGAATA+AGG | + | chr1_3:46871255-46871274 | Msa0121240:CDS | 40.0% |
GATGAATCCATGTTAGAAGG+AGG | + | chr1_3:46871416-46871435 | Msa0121240:intron | 40.0% | |
!!! | TCTTGCTTTTTGGGGGAAAA+AGG | - | chr1_3:46871951-46871970 | None:intergenic | 40.0% |
GTTGCTATGTGATTCCCAAT+AGG | - | chr1_3:46871989-46872008 | None:intergenic | 40.0% | |
ATTGGGAATCACATAGCAAC+CGG | + | chr1_3:46871989-46872008 | Msa0121240:intron | 40.0% | |
GGTTGCCTCATGTCATTAAT+AGG | - | chr1_3:46872113-46872132 | None:intergenic | 40.0% | |
! | AAAATGGGCTTCAAATGGCT+AGG | + | chr1_3:46872232-46872251 | Msa0121240:intron | 40.0% |
TCAAATGGCTAGGTATACTG+TGG | + | chr1_3:46872242-46872261 | Msa0121240:intron | 40.0% | |
CAAATGGCTAGGTATACTGT+GGG | + | chr1_3:46872243-46872262 | Msa0121240:intron | 40.0% | |
TTAAAATCCTCCGACTGATG+AGG | - | chr1_3:46872372-46872391 | None:intergenic | 40.0% | |
ATGGAAAGATTACTGCCCTA+TGG | + | chr1_3:46872392-46872411 | Msa0121240:CDS | 40.0% | |
ATCACTACATGCCACTCTTA+TGG | + | chr1_3:46872523-46872542 | Msa0121240:intron | 40.0% | |
TACATGCCACTCTTATGGAT+TGG | + | chr1_3:46872528-46872547 | Msa0121240:intron | 40.0% | |
TGTCAACCAATCCATAAGAG+TGG | - | chr1_3:46872537-46872556 | None:intergenic | 40.0% | |
AATAGACGAGAGCAAAACAG+AGG | - | chr1_3:46873003-46873022 | None:intergenic | 40.0% | |
GACTACATGATGTCCATTTG+TGG | + | chr1_3:46873111-46873130 | Msa0121240:CDS | 40.0% | |
! | TCATTGATAACCAAGGACCA+TGG | - | chr1_3:46873373-46873392 | None:intergenic | 40.0% |
ACACACACACACATATCAAG+AGG | + | chr1_3:46873615-46873634 | Msa0121240:intron | 40.0% | |
AGGTCTTTGCAGACAGAAAT+AGG | + | chr1_3:46873635-46873654 | Msa0121240:intron | 40.0% | |
CACAGGATTATACCTTCAAG+TGG | + | chr1_3:46873995-46874014 | Msa0121240:CDS | 40.0% | |
TATACCTTCAAGTGGCCAAA+AGG | + | chr1_3:46874003-46874022 | Msa0121240:CDS | 40.0% | |
! | ATTACCTTTTGGCCACTTGA+AGG | - | chr1_3:46874010-46874029 | None:intergenic | 40.0% |
! | CAGTTCCGCTTTGTTGTAAT+GGG | + | chr1_3:46874255-46874274 | Msa0121240:intron | 40.0% |
GATATGTATTGTACTCCCTC+CGG | + | chr1_3:46874583-46874602 | Msa0121240:intron | 40.0% | |
!!! | GTTTTGAAGTTGAGCATTGC+AGG | - | chr1_3:46874944-46874963 | None:intergenic | 40.0% |
! | TGCACAAGAGTACGAGTAAA+AGG | - | chr1_3:46874977-46874996 | None:intergenic | 40.0% |
! | TTTTACTCGTACTCTTGTGC+AGG | + | chr1_3:46874976-46874995 | Msa0121240:intron | 40.0% |
TAGATGATGAGATCTACGAG+GGG | + | chr1_3:46875351-46875370 | Msa0121240:intron | 40.0% | |
!!! | GCTCCTAACATTTTTCAAGC+AGG | - | chr1_3:46875515-46875534 | None:intergenic | 40.0% |
! | CAGGCCAGATTTTACAACAT+TGG | - | chr1_3:46875549-46875568 | None:intergenic | 40.0% |
CAATGTTGTAAAATCTGGCC+TGG | + | chr1_3:46875547-46875566 | Msa0121240:intron | 40.0% | |
! | GACAGTGCTGCTAAGTTAAA+AGG | - | chr1_3:46875647-46875666 | None:intergenic | 40.0% |
ATTTGCCCGTTTCAGTTAGA+AGG | - | chr1_3:46875714-46875733 | None:intergenic | 40.0% | |
! | GATGATGGTAGTGTTGTTGT+CGG | + | chr1_3:46876025-46876044 | Msa0121240:CDS | 40.0% |
! | ATGATGGTAGTGTTGTTGTC+GGG | + | chr1_3:46876026-46876045 | Msa0121240:CDS | 40.0% |
AAGAATTACCTTGCAGTACC+AGG | - | chr1_3:46876118-46876137 | None:intergenic | 40.0% | |
TAAACTACTCTCCCAACAAC+TGG | - | chr1_3:46876301-46876320 | None:intergenic | 40.0% | |
TGAACGGCAAAAATCTATGG+AGG | - | chr1_3:46876408-46876427 | None:intergenic | 40.0% | |
GCTTGAACGGCAAAAATCTA+TGG | - | chr1_3:46876411-46876430 | None:intergenic | 40.0% | |
CAACTAGTGTTAGGAGTTAG+AGG | - | chr1_3:46876465-46876484 | None:intergenic | 40.0% | |
TGCAGACTTCAAATCCAGTT+AGG | + | chr1_3:46876760-46876779 | Msa0121240:intron | 40.0% | |
TTATGACGTCGTACTATACC+TGG | + | chr1_3:46876849-46876868 | Msa0121240:CDS | 40.0% | |
TATGACGTCGTACTATACCT+GGG | + | chr1_3:46876850-46876869 | Msa0121240:CDS | 40.0% | |
CATTTGATGGGAACACTTTC+TGG | - | chr1_3:46877008-46877027 | None:intergenic | 40.0% | |
CTTTATCCTGGCACATTTGA+TGG | - | chr1_3:46877021-46877040 | None:intergenic | 40.0% | |
CAAAGCATGCATGCACAAAA+GGG | - | chr1_3:46877100-46877119 | None:intergenic | 40.0% | |
ACAAAGCATGCATGCACAAA+AGG | - | chr1_3:46877101-46877120 | None:intergenic | 40.0% | |
! | ATCAACGCTCTTTTGCTTGC+TGG | - | chr1_3:46868598-46868617 | None:intergenic | 45.0% |
TATGGGCGATGAAATTGAGC+TGG | + | chr1_3:46869072-46869091 | Msa0121240:intron | 45.0% | |
!! | ATATGTGTCGGTGTCGGATA+CGG | - | chr1_3:46869504-46869523 | None:intergenic | 45.0% |
ATGAAGCACAGATACGGACA+CGG | - | chr1_3:46869602-46869621 | None:intergenic | 45.0% | |
TCTGTGCTTCATAGATGTCG+TGG | + | chr1_3:46869610-46869629 | Msa0121240:intron | 45.0% | |
CTATTGCGATCAAAAGCCCA+CGG | - | chr1_3:46869710-46869729 | None:intergenic | 45.0% | |
GACTAAAGTACGACTGTTCG+TGG | - | chr1_3:46869760-46869779 | None:intergenic | 45.0% | |
CTTGTAGCTGTTGAGAATCC+GGG | + | chr1_3:46869976-46869995 | Msa0121240:five_prime_UTR | 45.0% | |
CAAACTACTAACTGTGGCCA+CGG | - | chr1_3:46870055-46870074 | None:intergenic | 45.0% | |
ATATTGACAAACGGCGAAGC+TGG | + | chr1_3:46870123-46870142 | Msa0121240:CDS | 45.0% | |
GGTCATTCCACTGAAATTGC+TGG | + | chr1_3:46870144-46870163 | Msa0121240:CDS | 45.0% | |
CCTAATGGCGAGTCATATTC+CGG | + | chr1_3:46870192-46870211 | Msa0121240:CDS | 45.0% | |
TCATATTCCGGATCCCTTCT+CGG | + | chr1_3:46870204-46870223 | Msa0121240:CDS | 45.0% | |
TACATACTTACCCTGACCCT+CGG | - | chr1_3:46870238-46870257 | None:intergenic | 45.0% | |
AGGGTCAGGGTAAGTATGTA+TGG | + | chr1_3:46870238-46870257 | Msa0121240:CDS | 45.0% | |
! | ATATGATGGTGAGTGGAGAC+GGG | + | chr1_3:46870275-46870294 | Msa0121240:CDS | 45.0% |
GGGAAAATACAATGGCCTTC+TGG | + | chr1_3:46870315-46870334 | Msa0121240:CDS | 45.0% | |
CCTTCATACAACACACCAGA+AGG | - | chr1_3:46870333-46870352 | None:intergenic | 45.0% | |
CCTTCTGGTGTGTTGTATGA+AGG | + | chr1_3:46870330-46870349 | Msa0121240:CDS | 45.0% | |
TTCTCTGGTGGCTATATCCA+CGG | + | chr1_3:46870357-46870376 | Msa0121240:CDS | 45.0% | |
CCTTTGTAGGTCAGACTTTC+TGG | - | chr1_3:46870402-46870421 | None:intergenic | 45.0% | |
CCAGAAAGTCTGACCTACAA+AGG | + | chr1_3:46870399-46870418 | Msa0121240:CDS | 45.0% | |
TTTGAAGGCTCTTGGATCCA+AGG | + | chr1_3:46870483-46870502 | Msa0121240:CDS | 45.0% | |
TTGGATCCAAGGAAATCCTG+AGG | + | chr1_3:46870494-46870513 | Msa0121240:CDS | 45.0% | |
TGGATCCAAGGAAATCCTGA+GGG | + | chr1_3:46870495-46870514 | Msa0121240:CDS | 45.0% | |
ATGAAAGGTGGGACAATGTC+AGG | + | chr1_3:46870564-46870583 | Msa0121240:CDS | 45.0% | |
GTAAGTGGAGACTCGTTTGA+AGG | + | chr1_3:46870606-46870625 | Msa0121240:CDS | 45.0% | |
! | ATGGTCTTGGCGCATATACT+TGG | + | chr1_3:46870652-46870671 | Msa0121240:CDS | 45.0% |
! | TGGTCTTGGCGCATATACTT+GGG | + | chr1_3:46870653-46870672 | Msa0121240:CDS | 45.0% |
!! | ATGCTAGATTTGGTGAGACC+CGG | + | chr1_3:46870871-46870890 | Msa0121240:CDS | 45.0% |
! | AACAGGTTTTCTGTGCCAGA+CGG | - | chr1_3:46870912-46870931 | None:intergenic | 45.0% |
ATGTTTCTCTTGAAAGGCGG+TGG | + | chr1_3:46870958-46870977 | Msa0121240:CDS | 45.0% | |
CTTCGCCGATGGAAATAAAG+AGG | + | chr1_3:46871046-46871065 | Msa0121240:CDS | 45.0% | |
GGAGCGTGAATATATGCAAG+GGG | + | chr1_3:46871091-46871110 | Msa0121240:CDS | 45.0% | |
GCCAAAGATATCAAAAGGCC+CGG | + | chr1_3:46871191-46871210 | Msa0121240:CDS | 45.0% | |
! | ACCGGGCCTTTTGATATCTT+TGG | - | chr1_3:46871195-46871214 | None:intergenic | 45.0% |
GCATCAGATCATAACTCCTG+TGG | - | chr1_3:46871235-46871254 | None:intergenic | 45.0% | |
!! | CTGATGCTTAGTTTGCAGCT+CGG | + | chr1_3:46871248-46871267 | Msa0121240:CDS | 45.0% |
AACTTCTCGTCTCTGTATGG+GGG | - | chr1_3:46872277-46872296 | None:intergenic | 45.0% | |
GAACTTCTCGTCTCTGTATG+GGG | - | chr1_3:46872278-46872297 | None:intergenic | 45.0% | |
CGAACTTCTCGTCTCTGTAT+GGG | - | chr1_3:46872279-46872298 | None:intergenic | 45.0% | |
TCGAACTTCTCGTCTCTGTA+TGG | - | chr1_3:46872280-46872299 | None:intergenic | 45.0% | |
!!! | GAAGTTCGAGCATCGGATTT+TGG | + | chr1_3:46872291-46872310 | Msa0121240:CDS | 45.0% |
!!! | TTGGTGCCAAAGCAAGCTTT+TGG | + | chr1_3:46872310-46872329 | Msa0121240:CDS | 45.0% |
ATTGACACCTCCTCATCAGT+CGG | + | chr1_3:46872359-46872378 | Msa0121240:CDS | 45.0% | |
ATTACTGCCCTATGGTGTTC+AGG | + | chr1_3:46872400-46872419 | Msa0121240:CDS | 45.0% | |
!! | ATGGATTGGTTGACAGCATC+AGG | + | chr1_3:46872542-46872561 | Msa0121240:intron | 45.0% |
TTGAGAGAACTATCGTCTCC+AGG | + | chr1_3:46873144-46873163 | Msa0121240:CDS | 45.0% | |
TGAGAGAACTATCGTCTCCA+GGG | + | chr1_3:46873145-46873164 | Msa0121240:CDS | 45.0% | |
!! | AAGACACTACCACTTTTCCC+TGG | - | chr1_3:46873165-46873184 | None:intergenic | 45.0% |
CAGTTGAAAACAAGCCTCCA+AGG | - | chr1_3:46873313-46873332 | None:intergenic | 45.0% | |
!! | CTTGGAGGCTTGTTTTCAAC+TGG | + | chr1_3:46873311-46873330 | Msa0121240:intron | 45.0% |
! | TTACCTGGGTGTTTTCTCCA+TGG | + | chr1_3:46873353-46873372 | Msa0121240:intron | 45.0% |
TGTGTGTGTGTAGGTACATC+CGG | - | chr1_3:46873596-46873615 | None:intergenic | 45.0% | |
! | GCAGTTCCGCTTTGTTGTAA+TGG | + | chr1_3:46874254-46874273 | Msa0121240:intron | 45.0% |
AATAAAGACTCCCGCCAAGA+CGG | - | chr1_3:46874423-46874442 | None:intergenic | 45.0% | |
TCTTTCTCCTCTGTGTTCCT+AGG | - | chr1_3:46874513-46874532 | None:intergenic | 45.0% | |
TGAGACTGACAGCAAGTTCT+TGG | + | chr1_3:46875004-46875023 | Msa0121240:CDS | 45.0% | |
CTTGGAGGAACAGCACATAA+TGG | + | chr1_3:46875022-46875041 | Msa0121240:CDS | 45.0% | |
AGATGATGAGATCTACGAGG+GGG | + | chr1_3:46875352-46875371 | Msa0121240:intron | 45.0% | |
TGTAAAATCTGGCCTGGACT+TGG | + | chr1_3:46875553-46875572 | Msa0121240:intron | 45.0% | |
! | AAAGGACCTGGCTATCCTTT+TGG | - | chr1_3:46875584-46875603 | None:intergenic | 45.0% |
ATCAACTACAGACCCTCTAG+AGG | + | chr1_3:46875952-46875971 | Msa0121240:intron | 45.0% | |
!! | CTATCCTCAAGGTCTTGTTC+TGG | + | chr1_3:46875988-46876007 | Msa0121240:CDS | 45.0% |
TTCTTCTACCTGGTACTGCA+AGG | + | chr1_3:46876107-46876126 | Msa0121240:CDS | 45.0% | |
TGGTGCAATACTCCAGTTGT+TGG | + | chr1_3:46876286-46876305 | Msa0121240:intron | 45.0% | |
GGTGCAATACTCCAGTTGTT+GGG | + | chr1_3:46876287-46876306 | Msa0121240:intron | 45.0% | |
GTGTTAGGAGTTAGAGGATG+TGG | - | chr1_3:46876459-46876478 | None:intergenic | 45.0% | |
! | GTAGGAGTGCAACTAGTGTT+AGG | - | chr1_3:46876474-46876493 | None:intergenic | 45.0% |
! | CAGAAGTGTGGTGCAATCAT+TGG | - | chr1_3:46876554-46876573 | None:intergenic | 45.0% |
AGAGCAGATACCAGGAAAAG+AGG | + | chr1_3:46876804-46876823 | Msa0121240:CDS | 45.0% | |
GGAAACTCAAATGTTCCACG+AGG | + | chr1_3:46876825-46876844 | Msa0121240:CDS | 45.0% | |
TTCGTTATCTATATCGGCGG+TGG | + | chr1_3:46876945-46876964 | Msa0121240:CDS | 45.0% | |
AAGCGACGAGAGTAGAATGT+AGG | - | chr1_3:46876973-46876992 | None:intergenic | 45.0% | |
TCGGTGTGTCAGTGTTTGTG+TGG | + | chr1_3:46869566-46869585 | Msa0121240:intron | 50.0% | |
ACAGATACGGACACGGACAT+CGG | - | chr1_3:46869595-46869614 | None:intergenic | 50.0% | |
! | ATTATGCATGTCTGGCTCCG+TGG | + | chr1_3:46870035-46870054 | Msa0121240:exon | 50.0% |
CGTGGCCACAGTTAGTAGTT+TGG | + | chr1_3:46870053-46870072 | Msa0121240:CDS | 50.0% | |
GGGGAACTCTCTCTTCCTAA+TGG | + | chr1_3:46870177-46870196 | Msa0121240:CDS | 50.0% | |
CCGGAATATGACTCGCCATT+AGG | - | chr1_3:46870195-46870214 | None:intergenic | 50.0% | |
ACATACTTACCCTGACCCTC+GGG | - | chr1_3:46870237-46870256 | None:intergenic | 50.0% | |
! | TATGATGGTGAGTGGAGACG+GGG | + | chr1_3:46870276-46870295 | Msa0121240:CDS | 50.0% |
! | GGGGGATGAGGAATGGATTT+GGG | + | chr1_3:46870295-46870314 | Msa0121240:CDS | 50.0% |
GTCTGACCTACAAAGGTCGA+TGG | + | chr1_3:46870406-46870425 | Msa0121240:CDS | 50.0% | |
GAATCGCCATCGACCTTTGT+AGG | - | chr1_3:46870415-46870434 | None:intergenic | 50.0% | |
GGATCCAAGGAAATCCTGAG+GGG | + | chr1_3:46870496-46870515 | Msa0121240:CDS | 50.0% | |
TTAGCCCAGGTATACTTGCC+TGG | - | chr1_3:46870522-46870541 | None:intergenic | 50.0% | |
GGCAAGTATACCTGGGCTAA+CGG | + | chr1_3:46870522-46870541 | Msa0121240:CDS | 50.0% | |
AGGCAAAGGAACCCTTACCT+GGG | + | chr1_3:46870584-46870603 | Msa0121240:CDS | 50.0% | |
GTCTCCACTTACCCAGGTAA+GGG | - | chr1_3:46870598-46870617 | None:intergenic | 50.0% | |
AGTCTCCACTTACCCAGGTA+AGG | - | chr1_3:46870599-46870618 | None:intergenic | 50.0% | |
AAACGAGTCTCCACTTACCC+AGG | - | chr1_3:46870604-46870623 | None:intergenic | 50.0% | |
GAGACTCGTTTGAAGGAAGC+TGG | + | chr1_3:46870613-46870632 | Msa0121240:CDS | 50.0% | |
GGTCTTGGCGCATATACTTG+GGG | + | chr1_3:46870654-46870673 | Msa0121240:CDS | 50.0% | |
GCGCATATACTTGGGGTGAT+GGG | + | chr1_3:46870661-46870680 | Msa0121240:CDS | 50.0% | |
CGCATATACTTGGGGTGATG+GGG | + | chr1_3:46870662-46870681 | Msa0121240:CDS | 50.0% | |
! | GCATATACTTGGGGTGATGG+GGG | + | chr1_3:46870663-46870682 | Msa0121240:CDS | 50.0% |
!! | CATATACTTGGGGTGATGGG+GGG | + | chr1_3:46870664-46870683 | Msa0121240:CDS | 50.0% |
GCTATGTTGGGACATGGACA+CGG | + | chr1_3:46870688-46870707 | Msa0121240:CDS | 50.0% | |
CTATGTTGGGACATGGACAC+GGG | + | chr1_3:46870689-46870708 | Msa0121240:CDS | 50.0% | |
TATGTTGGGACATGGACACG+GGG | + | chr1_3:46870690-46870709 | Msa0121240:CDS | 50.0% | |
TGGACACGGGGTCTTAAAGA+TGG | + | chr1_3:46870702-46870721 | Msa0121240:CDS | 50.0% | |
CGGGGTCTTAAAGATGGCAA+AGG | + | chr1_3:46870708-46870727 | Msa0121240:CDS | 50.0% | |
! | GATGGCAGACAGCTTCCTTT+TGG | - | chr1_3:46870744-46870763 | None:intergenic | 50.0% |
TGAAAGGCGGTGGAGTTTAG+AGG | + | chr1_3:46870968-46870987 | Msa0121240:CDS | 50.0% | |
GCTTAAGGCAACGCATCTTC+CGG | - | chr1_3:46872011-46872030 | None:intergenic | 50.0% | |
GAGACGAGAAGTTCGAGCAT+CGG | + | chr1_3:46872284-46872303 | Msa0121240:CDS | 50.0% | |
AAATCCTCCGACTGATGAGG+AGG | - | chr1_3:46872369-46872388 | None:intergenic | 50.0% | |
!! | GCCTCATTCATCGACTCAGT+AGG | + | chr1_3:46872468-46872487 | Msa0121240:intron | 50.0% |
GCCTACTGAGTCGATGAATG+AGG | - | chr1_3:46872472-46872491 | None:intergenic | 50.0% | |
CTATCGTCTCCAGGGAAAAG+TGG | + | chr1_3:46873153-46873172 | Msa0121240:CDS | 50.0% | |
! | GGTGTTTTCTCCATGGTCCT+TGG | + | chr1_3:46873360-46873379 | Msa0121240:intron | 50.0% |
GTGTGTGTGTGTGTGTGTGT+AGG | - | chr1_3:46873605-46873624 | None:intergenic | 50.0% | |
CTTGTCGGAAGAACGTCCAA+GGG | - | chr1_3:46874337-46874356 | None:intergenic | 50.0% | |
TCTTGTCGGAAGAACGTCCA+AGG | - | chr1_3:46874338-46874357 | None:intergenic | 50.0% | |
! | GCTTTTACTTGGAGCCGTCT+TGG | + | chr1_3:46874406-46874425 | Msa0121240:CDS | 50.0% |
TTTACTTGGAGCCGTCTTGG+CGG | + | chr1_3:46874409-46874428 | Msa0121240:CDS | 50.0% | |
GACTGACAGCAAGTTCTTGG+AGG | + | chr1_3:46875007-46875026 | Msa0121240:CDS | 50.0% | |
! | TGGTTTGGCAATGCTTGCAG+AGG | + | chr1_3:46875118-46875137 | Msa0121240:CDS | 50.0% |
TTGGCAATGCTTGCAGAGGA+AGG | + | chr1_3:46875122-46875141 | Msa0121240:CDS | 50.0% | |
AAATCTGGCCTGGACTTGGA+TGG | + | chr1_3:46875557-46875576 | Msa0121240:intron | 50.0% | |
! | CTTTTGGACCATCCAAGTCC+AGG | - | chr1_3:46875568-46875587 | None:intergenic | 50.0% |
CTGGACTTGGATGGTCCAAA+AGG | + | chr1_3:46875566-46875585 | Msa0121240:intron | 50.0% | |
GATGGTCCAAAAGGATAGCC+AGG | + | chr1_3:46875575-46875594 | Msa0121240:intron | 50.0% | |
AATTGGACCAGCAAAGGACC+TGG | - | chr1_3:46875596-46875615 | None:intergenic | 50.0% | |
!! | AAGGTCTTGTTCTGGTCCCT+CGG | + | chr1_3:46875996-46876015 | Msa0121240:CDS | 50.0% |
GTTGTCGGGTCACACATTAG+AGG | + | chr1_3:46876040-46876059 | Msa0121240:CDS | 50.0% | |
GAGGTGGATCTTCTTCTACC+TGG | + | chr1_3:46876097-46876116 | Msa0121240:CDS | 50.0% | |
! | AAAATACGGGCGGCTGTTTC+TGG | + | chr1_3:46876259-46876278 | Msa0121240:intron | 50.0% |
CTGGCATGTTCACACCTAAC+TGG | - | chr1_3:46876777-46876796 | None:intergenic | 50.0% | |
TAGGTGTGAACATGCCAGCA+AGG | + | chr1_3:46876779-46876798 | Msa0121240:CDS | 50.0% | |
AGGTGTGAACATGCCAGCAA+GGG | + | chr1_3:46876780-46876799 | Msa0121240:CDS | 50.0% | |
ATTCTACTCTCGTCGCTTCC+TGG | + | chr1_3:46876975-46876994 | Msa0121240:CDS | 50.0% | |
GTGTTCCCATCAAATGTGCC+AGG | + | chr1_3:46877012-46877031 | Msa0121240:CDS | 50.0% | |
! | AAAAGCCCACGGCTTGGGTT+GGG | - | chr1_3:46869699-46869718 | None:intergenic | 55.0% |
CGATCAAAAGCCCACGGCTT+GGG | - | chr1_3:46869704-46869723 | None:intergenic | 55.0% | |
GTTCGTGGGCCAGTTTGGTT+CGG | - | chr1_3:46869745-46869764 | None:intergenic | 55.0% | |
AACGTTGCCGAGAAGGGATC+CGG | - | chr1_3:46870214-46870233 | None:intergenic | 55.0% | |
! | ATGATGGTGAGTGGAGACGG+GGG | + | chr1_3:46870277-46870296 | Msa0121240:CDS | 55.0% |
! | CGGGGGATGAGGAATGGATT+TGG | + | chr1_3:46870294-46870313 | Msa0121240:CDS | 55.0% |
GGTGGCTATATCCACGGTAC+AGG | + | chr1_3:46870363-46870382 | Msa0121240:CDS | 55.0% | |
GGTGGGACAATGTCAGGCAA+AGG | + | chr1_3:46870570-46870589 | Msa0121240:CDS | 55.0% | |
CAGGCAAAGGAACCCTTACC+TGG | + | chr1_3:46870583-46870602 | Msa0121240:CDS | 55.0% | |
GGAACCCTTACCTGGGTAAG+TGG | + | chr1_3:46870591-46870610 | Msa0121240:CDS | 55.0% | |
GGCGCATATACTTGGGGTGA+TGG | + | chr1_3:46870660-46870679 | Msa0121240:CDS | 55.0% | |
!! | GTGATGGGGGGTGCTATGTT+GGG | + | chr1_3:46870676-46870695 | Msa0121240:CDS | 55.0% |
TTTGGTGAGACCCGGAGAAC+AGG | + | chr1_3:46870879-46870898 | Msa0121240:CDS | 55.0% | |
ACGGAACACCACCTGTTCTC+CGG | - | chr1_3:46870893-46870912 | None:intergenic | 55.0% | |
AGAACAGGTGGTGTTCCGTC+TGG | + | chr1_3:46870894-46870913 | Msa0121240:CDS | 55.0% | |
GGCGAAGACTGAATCCGTTG+AGG | - | chr1_3:46871033-46871052 | None:intergenic | 55.0% | |
ACGGATTCAGTCTTCGCCGA+TGG | + | chr1_3:46871035-46871054 | Msa0121240:CDS | 55.0% | |
GGACCATGGAGAAAACACCC+AGG | - | chr1_3:46873359-46873378 | None:intergenic | 55.0% | |
TTACTTGGAGCCGTCTTGGC+GGG | + | chr1_3:46874410-46874429 | Msa0121240:CDS | 55.0% | |
AGGATAGCCAGGTCCTTTGC+TGG | + | chr1_3:46875586-46875605 | Msa0121240:intron | 55.0% | |
GGGACCAGAACAAGACCTTG+AGG | - | chr1_3:46875995-46876014 | None:intergenic | 55.0% | |
!! | AGGTCTTGTTCTGGTCCCTC+GGG | + | chr1_3:46875997-46876016 | Msa0121240:CDS | 55.0% |
TACCATCATCTGCTCCCCGA+GGG | - | chr1_3:46876015-46876034 | None:intergenic | 55.0% | |
CAGCAGCTGAAGCTCGCAAT+CGG | - | chr1_3:46876069-46876088 | None:intergenic | 55.0% | |
GTACGACGTCATAAGCCTCG+TGG | - | chr1_3:46876843-46876862 | None:intergenic | 55.0% | |
ATCCAACCCAACCCAAGCCG+TGG | + | chr1_3:46869690-46869709 | Msa0121240:intron | 60.0% | |
TCCAACCCAACCCAAGCCGT+GGG | + | chr1_3:46869691-46869710 | Msa0121240:intron | 60.0% | |
! | CAAAAGCCCACGGCTTGGGT+TGG | - | chr1_3:46869700-46869719 | None:intergenic | 60.0% |
GCGATCAAAAGCCCACGGCT+TGG | - | chr1_3:46869705-46869724 | None:intergenic | 60.0% | |
CGACTGTTCGTGGGCCAGTT+TGG | - | chr1_3:46869750-46869769 | None:intergenic | 60.0% | |
CTCGGGAACGTTGCCGAGAA+GGG | - | chr1_3:46870220-46870239 | None:intergenic | 60.0% | |
CTTCTCGGCAACGTTCCCGA+GGG | + | chr1_3:46870219-46870238 | Msa0121240:CDS | 60.0% | |
TGGAGACGGGGGATGAGGAA+TGG | + | chr1_3:46870288-46870307 | Msa0121240:CDS | 60.0% | |
CTGGCCCCTCAGGATTTCCT+TGG | - | chr1_3:46870503-46870522 | None:intergenic | 60.0% | |
CAAGGAAATCCTGAGGGGCC+AGG | + | chr1_3:46870501-46870520 | Msa0121240:CDS | 60.0% | |
GTATACTTGCCTGGCCCCTC+AGG | - | chr1_3:46870513-46870532 | None:intergenic | 60.0% | |
AGGGGCCAGGCAAGTATACC+TGG | + | chr1_3:46870514-46870533 | Msa0121240:CDS | 60.0% | |
GGGGCCAGGCAAGTATACCT+GGG | + | chr1_3:46870515-46870534 | Msa0121240:CDS | 60.0% | |
!! | GGTGATGGGGGGTGCTATGT+TGG | + | chr1_3:46870675-46870694 | Msa0121240:CDS | 60.0% |
!! | GGGGGTGCTATGTTGGGACA+TGG | + | chr1_3:46870682-46870701 | Msa0121240:CDS | 60.0% |
CGGAACACCACCTGTTCTCC+GGG | - | chr1_3:46870892-46870911 | None:intergenic | 60.0% | |
GACACCTCCTCATCAGTCGG+AGG | + | chr1_3:46872362-46872381 | Msa0121240:CDS | 60.0% | |
AACAGGAGGACGCAGCTGCT+GGG | - | chr1_3:46875084-46875103 | None:intergenic | 60.0% | |
TAACAGGAGGACGCAGCTGC+TGG | - | chr1_3:46875085-46875104 | None:intergenic | 60.0% | |
!! | GGTCTTGTTCTGGTCCCTCG+GGG | + | chr1_3:46875998-46876017 | Msa0121240:CDS | 60.0% |
CTACCATCATCTGCTCCCCG+AGG | - | chr1_3:46876016-46876035 | None:intergenic | 60.0% | |
CGATTGCGAGCTTCAGCTGC+TGG | + | chr1_3:46876067-46876086 | Msa0121240:CDS | 60.0% | |
! | AGCTTCAGCTGCTGGTGACG+AGG | + | chr1_3:46876075-46876094 | Msa0121240:CDS | 60.0% |
! | TTCAGCTGCTGGTGACGAGG+AGG | + | chr1_3:46876078-46876097 | Msa0121240:CDS | 60.0% |
GGTATCTGCTCTGCCCTTGC+TGG | - | chr1_3:46876796-46876815 | None:intergenic | 60.0% | |
GCAAGGGCAGAGCAGATACC+AGG | + | chr1_3:46876796-46876815 | Msa0121240:CDS | 60.0% | |
CCTCGGGAACGTTGCCGAGA+AGG | - | chr1_3:46870221-46870240 | None:intergenic | 65.0% | |
CCTTCTCGGCAACGTTCCCG+AGG | + | chr1_3:46870218-46870237 | Msa0121240:CDS | 65.0% | |
GGCAACGTTCCCGAGGGTCA+GGG | + | chr1_3:46870225-46870244 | Msa0121240:CDS | 65.0% | |
GTGAGTGGAGACGGGGGATG+AGG | + | chr1_3:46870283-46870302 | Msa0121240:CDS | 65.0% | |
GGTGAGACCCGGAGAACAGG+TGG | + | chr1_3:46870882-46870901 | Msa0121240:CDS | 65.0% | |
ACAGGAGGACGCAGCTGCTG+GGG | - | chr1_3:46875083-46875102 | None:intergenic | 65.0% | |
GTCCCTCGGGGAGCAGATGA+TGG | + | chr1_3:46876010-46876029 | Msa0121240:CDS | 65.0% | |
! | AGCTGCTGGTGACGAGGAGG+TGG | + | chr1_3:46876081-46876100 | Msa0121240:CDS | 65.0% |
!! | GGGCGGCTGTTTCTGGCATC+TGG | + | chr1_3:46876266-46876285 | Msa0121240:intron | 65.0% |
!! | GCCCACGGCTTGGGTTGGGT+TGG | - | chr1_3:46869695-46869714 | None:intergenic | 70.0% |
CGGCAACGTTCCCGAGGGTC+AGG | + | chr1_3:46870224-46870243 | Msa0121240:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 46868442 | 46877231 | 46868442 | ID=Msa0121240;Name=Msa0121240 |
chr1_3 | mRNA | 46868442 | 46877231 | 46868442 | ID=Msa0121240-mRNA-1;Parent=Msa0121240;Name=Msa0121240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=375|1|1|1|0.87|0.77|9|193|817 |
chr1_3 | exon | 46868442 | 46868686 | 46868442 | ID=Msa0121240-mRNA-1:exon:14105;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46869912 | 46871276 | 46869912 | ID=Msa0121240-mRNA-1:exon:14106;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46872254 | 46872421 | 46872254 | ID=Msa0121240-mRNA-1:exon:14107;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46873077 | 46873242 | 46873077 | ID=Msa0121240-mRNA-1:exon:14108;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46873914 | 46874024 | 46873914 | ID=Msa0121240-mRNA-1:exon:14109;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46874258 | 46874445 | 46874258 | ID=Msa0121240-mRNA-1:exon:14110;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46874998 | 46875143 | 46874998 | ID=Msa0121240-mRNA-1:exon:14111;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46875963 | 46876128 | 46875963 | ID=Msa0121240-mRNA-1:exon:14112;Parent=Msa0121240-mRNA-1 |
chr1_3 | exon | 46876765 | 46877231 | 46876765 | ID=Msa0121240-mRNA-1:exon:14113;Parent=Msa0121240-mRNA-1 |
chr1_3 | five_prime_UTR | 46868442 | 46868686 | 46868442 | ID=Msa0121240-mRNA-1:five_prime_utr;Parent=Msa0121240-mRNA-1 |
chr1_3 | five_prime_UTR | 46869912 | 46870041 | 46869912 | ID=Msa0121240-mRNA-1:five_prime_utr;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46870042 | 46871276 | 46870042 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46872254 | 46872421 | 46872254 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46873077 | 46873242 | 46873077 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46873914 | 46874024 | 46873914 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46874258 | 46874445 | 46874258 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46874998 | 46875143 | 46874998 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46875963 | 46876128 | 46875963 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | CDS | 46876765 | 46877038 | 46876765 | ID=Msa0121240-mRNA-1:cds;Parent=Msa0121240-mRNA-1 |
chr1_3 | three_prime_UTR | 46877039 | 46877231 | 46877039 | ID=Msa0121240-mRNA-1:three_prime_utr;Parent=Msa0121240-mRNA-1 |
Gene Sequence |
Protein sequence |