AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0166250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166250 MtrunA17_Chr1g0180261 98.417 821 9 1 1 817 1 821 0.0 1665
Msa0166250 MtrunA17_Chr8g0380791 51.535 782 343 10 44 812 6 764 0.0 772
Msa0166250 MtrunA17_Chr1g0171491 41.577 837 401 19 3 811 14 790 0.0 596
Msa0166250 MtrunA17_Chr8g0353121 42.401 783 349 16 47 811 49 747 0.0 581
Msa0166250 MtrunA17_Chr7g0256301 43.278 781 368 17 47 811 67 788 0.0 580
Msa0166250 MtrunA17_Chr7g0256301 33.588 131 64 1 45 175 134 241 3.84e-15 79.7
Msa0166250 MtrunA17_Chr5g0424301 42.261 743 319 16 97 811 69 729 2.07e-180 536
Msa0166250 MtrunA17_Chr5g0424301 48.066 181 85 1 42 213 60 240 9.02e-52 193
Msa0166250 MtrunA17_Chr3g0115111 40.048 834 350 17 8 814 21 731 2.61e-179 533
Msa0166250 MtrunA17_Chr3g0131001 41.421 746 307 16 97 811 55 701 2.26e-168 504
Msa0166250 MtrunA17_Chr3g0131001 49.714 175 88 0 47 221 51 225 5.58e-47 179
Msa0166250 MtrunA17_Chr8g0385201 52.632 437 146 7 386 811 277 663 1.45e-144 441
Msa0166250 MtrunA17_Chr8g0385201 47.337 169 88 1 44 211 23 191 1.04e-46 177
Msa0166250 MtrunA17_Chr8g0385201 35.036 137 88 1 97 232 30 166 1.81e-16 84.0
Msa0166250 MtrunA17_Chr3g0082501 50.913 438 169 9 385 811 355 757 1.31e-131 410
Msa0166250 MtrunA17_Chr3g0082501 48.691 191 98 0 47 237 60 250 3.43e-57 209
Msa0166250 MtrunA17_Chr3g0082501 36.000 100 63 1 46 145 151 249 4.96e-11 66.6
Msa0166250 MtrunA17_Chr8g0377191 38.043 184 114 0 47 230 8 191 2.82e-38 141
Msa0166250 MtrunA17_Chr8g0377191 31.967 122 83 0 52 173 82 203 2.89e-16 78.2
Msa0166250 MtrunA17_Chr8g0377191 29.907 107 75 0 46 152 99 205 1.10e-12 67.8
Msa0166250 MtrunA17_Chr8g0382971 32.317 328 197 5 37 364 11 313 2.69e-36 140
Msa0166250 MtrunA17_Chr8g0382971 33.333 195 128 1 28 220 46 240 5.12e-27 113
Msa0166250 MtrunA17_Chr8g0377671 40.323 186 111 0 45 230 14 199 4.09e-36 138
Msa0166250 MtrunA17_Chr8g0377671 35.802 162 104 0 46 207 107 268 5.51e-24 102
Msa0166250 MtrunA17_Chr4g0059911 40.000 180 107 1 53 231 11 190 6.40e-32 128
Msa0166250 MtrunA17_Chr4g0059911 31.739 230 148 2 48 272 53 278 9.18e-28 116
Msa0166250 MtrunA17_Chr4g0059911 30.909 165 91 1 46 187 74 238 2.21e-15 79.0
Msa0166250 MtrunA17_Chr2g0316611 34.649 228 144 3 46 272 100 323 1.18e-29 121
Msa0166250 MtrunA17_Chr2g0316611 34.783 230 145 3 44 272 29 254 2.40e-29 120
Msa0166250 MtrunA17_Chr2g0316611 36.735 196 123 1 46 240 169 364 1.06e-28 119
Msa0166250 MtrunA17_Chr2g0316611 35.385 130 84 0 46 175 238 367 3.35e-19 90.5
Msa0166250 MtrunA17_Chr2g0316631 33.333 237 152 4 44 279 29 260 6.12e-28 115
Msa0166250 MtrunA17_Chr2g0316631 34.872 195 126 1 46 239 100 294 1.25e-26 111
Msa0166250 MtrunA17_Chr6g0467061 32.340 235 146 2 46 279 83 305 1.34e-27 114
Msa0166250 MtrunA17_Chr6g0467061 35.533 197 98 3 50 246 18 185 9.41e-26 109
Msa0166250 MtrunA17_Chr6g0467061 34.239 184 121 0 46 229 152 335 1.64e-22 99.8
Msa0166250 MtrunA17_Chr8g0377221 32.900 231 116 3 50 241 4 234 5.04e-27 111
Msa0166250 MtrunA17_Chr8g0385241 27.532 385 189 11 56 364 15 385 3.90e-25 109
Msa0166250 MtrunA17_Chr8g0385241 32.212 208 128 3 26 220 98 305 1.18e-22 101
Msa0166250 MtrunA17_Chr8g0385241 30.573 157 108 1 45 200 175 331 5.42e-13 72.0
Msa0166250 MtrunA17_Chr8g0385241 34.426 122 80 0 101 222 14 135 1.82e-12 70.5
Msa0166250 MtrunA17_Chr8g0377211 39.231 130 79 0 78 207 23 152 4.69e-22 94.0
Msa0166250 MtrunA17_Chr8g0377211 42.991 107 61 0 124 230 23 129 8.37e-22 93.2
Msa0166250 MtrunA17_Chr8g0377211 30.769 117 81 0 45 161 36 152 5.58e-11 62.0
Msa0166250 MtrunA17_Chr8g0336161 33.721 172 91 1 56 227 225 373 5.56e-21 97.1
Msa0166250 MtrunA17_Chr8g0336161 29.082 196 114 2 37 232 185 355 2.84e-19 91.7
Msa0166250 MtrunA17_Chr8g0336161 34.074 135 89 0 46 180 238 372 7.29e-13 71.6
Msa0166250 MtrunA17_Chr8g0336161 34.545 110 72 0 124 233 201 310 9.40e-13 71.2
Msa0166250 MtrunA17_Chr7g0233351 32.258 186 123 1 52 234 193 378 7.52e-21 96.7
Msa0166250 MtrunA17_Chr7g0233351 32.298 161 109 0 72 232 190 350 1.53e-20 95.5
Msa0166250 MtrunA17_Chr7g0233351 33.871 124 59 1 133 233 182 305 3.44e-12 69.7
Msa0166250 MtrunA17_Chr4g0055371 30.049 203 134 2 72 274 170 364 1.08e-20 95.9
Msa0166250 MtrunA17_Chr4g0055371 31.818 176 120 0 52 227 173 348 6.59e-20 93.2
Msa0166250 MtrunA17_Chr4g0055371 29.592 196 131 3 8 203 159 347 9.08e-18 86.7
Msa0166250 MtrunA17_Chr4g0055371 33.133 166 86 3 68 233 145 285 9.99e-15 77.4
Msa0166250 MtrunA17_Chr3g0114791 32.121 165 112 0 68 232 179 343 1.39e-20 95.5
Msa0166250 MtrunA17_Chr3g0114791 30.636 173 120 0 52 224 186 358 1.72e-18 89.0
Msa0166250 MtrunA17_Chr3g0114791 33.333 138 69 2 96 233 184 298 2.80e-14 75.9
Msa0166250 MtrunA17_Chr3g0114791 29.730 148 81 1 56 180 213 360 4.98e-13 72.0
Msa0166250 MtrunA17_Chr5g0424111 31.609 174 119 0 59 232 182 355 3.45e-20 94.4
Msa0166250 MtrunA17_Chr5g0424111 32.948 173 116 0 52 224 198 370 7.62e-20 93.2
Msa0166250 MtrunA17_Chr5g0424111 34.058 138 68 2 96 233 196 310 2.10e-15 79.7
Msa0166250 MtrunA17_Chr5g0424111 34.848 132 86 0 49 180 241 372 1.11e-13 74.3
Msa0166250 MtrunA17_Chr8g0383331 32.484 157 101 2 94 245 1 157 5.29e-18 82.0
Msa0166250 MtrunA17_Chr8g0383331 32.667 150 101 0 48 197 1 150 8.16e-18 81.6
Msa0166250 MtrunA17_Chr8g0383331 31.757 148 101 0 73 220 3 150 8.31e-15 73.2
Msa0166250 MtrunA17_Chr5g0398011 34.752 141 69 1 48 188 32 149 1.33e-16 77.8
Msa0166250 MtrunA17_Chr5g0398011 36.036 111 71 0 97 207 35 145 1.41e-14 72.0
Msa0166250 MtrunA17_Chr5g0398021 33.594 128 62 1 48 175 10 114 1.99e-14 71.6
Msa0166250 MtrunA17_Chr5g0398021 34.694 98 64 0 99 196 15 112 4.76e-11 62.0
Msa0166250 MtrunA17_Chr8g0383551 28.774 212 103 8 56 219 33 244 6.69e-14 74.3
Msa0166250 MtrunA17_Chr8g0383551 31.169 154 94 3 73 214 109 262 4.98e-13 71.6
Msa0166250 MtrunA17_Chr8g0383551 25.364 343 200 13 78 389 32 349 6.58e-13 71.2
Msa0166250 MtrunA17_Chr8g0377201 43.750 64 36 0 142 205 3 66 8.92e-13 64.7
Msa0166250 MtrunA17_Chr1g0210831 26.490 151 88 1 53 203 615 742 1.81e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166250 AT3G09920.3 73.129 815 203 6 6 814 8 812 0.0 1237
Msa0166250 AT3G09920.4 73.129 815 203 6 6 814 8 812 0.0 1237
Msa0166250 AT3G09920.2 73.129 815 203 6 6 814 8 812 0.0 1237
Msa0166250 AT3G09920.1 73.129 815 203 6 6 814 8 812 0.0 1237
Msa0166250 AT1G60890.1 50.576 781 356 8 44 812 4 766 0.0 766
Msa0166250 AT1G60890.2 50.578 779 355 8 46 812 18 778 0.0 764
Msa0166250 AT1G10900.2 49.744 780 351 11 43 812 3 751 0.0 748
Msa0166250 AT1G10900.1 49.744 780 351 11 43 812 3 751 0.0 748
Msa0166250 AT1G10900.3 49.744 780 351 11 43 812 3 751 0.0 748
Msa0166250 AT2G41210.1 43.451 794 347 15 38 811 57 768 0.0 624
Msa0166250 AT3G56960.2 43.056 792 348 17 46 814 67 778 0.0 613
Msa0166250 AT3G56960.1 43.056 792 348 17 46 814 67 778 0.0 613
Msa0166250 AT1G21980.1 42.703 740 332 14 97 811 76 748 0.0 541
Msa0166250 AT1G21980.1 48.295 176 91 0 47 222 72 247 8.14e-51 191
Msa0166250 AT1G21980.1 29.927 137 71 2 37 173 133 244 8.95e-13 72.8
Msa0166250 AT1G77740.2 43.221 745 322 16 97 811 77 750 1.23e-179 535
Msa0166250 AT1G77740.2 46.591 176 94 0 47 222 73 248 1.89e-51 193
Msa0166250 AT1G77740.2 36.905 84 53 0 46 129 164 247 2.61e-11 67.8
Msa0166250 AT1G77740.1 43.221 745 322 16 97 811 77 750 1.23e-179 535
Msa0166250 AT1G77740.1 46.591 176 94 0 47 222 73 248 1.89e-51 193
Msa0166250 AT1G77740.1 36.905 84 53 0 46 129 164 247 2.61e-11 67.8
Msa0166250 AT2G26420.2 38.564 822 373 12 7 811 9 715 7.64e-177 526
Msa0166250 AT2G26420.3 38.564 822 373 12 7 811 9 715 7.64e-177 526
Msa0166250 AT2G26420.1 38.808 822 357 14 7 811 9 701 4.78e-176 524
Msa0166250 AT3G07960.1 39.873 785 368 20 47 811 11 711 1.03e-174 521
Msa0166250 AT3G07960.1 34.483 174 68 1 46 173 22 195 5.63e-28 121
Msa0166250 AT3G07960.2 40.422 616 309 13 47 649 11 581 3.71e-143 436
Msa0166250 AT3G07960.2 34.483 174 68 1 46 173 22 195 1.01e-27 119
Msa0166250 AT3G07960.4 40.422 616 309 13 47 649 11 581 3.71e-143 436
Msa0166250 AT3G07960.4 34.483 174 68 1 46 173 22 195 1.01e-27 119
Msa0166250 AT3G07960.3 40.422 616 309 13 47 649 11 581 3.80e-143 436
Msa0166250 AT3G07960.3 34.483 174 68 1 46 173 22 195 7.55e-28 120
Msa0166250 AT4G01190.3 37.037 405 228 6 424 811 6 400 3.37e-83 272
Msa0166250 AT4G01190.2 37.037 405 228 6 424 811 6 400 3.37e-83 272
Msa0166250 AT4G01190.1 38.786 379 205 6 450 811 22 390 6.27e-83 271
Msa0166250 AT1G01460.1 37.619 420 226 7 424 811 4 419 3.47e-82 270
Msa0166250 AT1G77660.1 33.333 165 110 0 68 232 172 336 2.14e-21 98.2
Msa0166250 AT1G77660.1 31.429 175 120 0 50 224 177 351 7.43e-19 90.5
Msa0166250 AT1G77660.1 34.058 138 68 2 96 233 177 291 4.34e-15 79.0
Msa0166250 AT1G77660.1 28.378 148 83 1 56 180 206 353 5.22e-12 69.3
Msa0166250 AT4G17080.1 33.125 160 107 0 73 232 256 415 3.25e-21 98.6
Msa0166250 AT4G17080.1 32.759 174 117 0 52 225 258 431 3.58e-20 95.5
Msa0166250 AT4G17080.1 33.108 148 99 0 56 203 285 432 1.60e-19 93.6
Msa0166250 AT4G17080.1 34.532 139 68 2 95 233 255 370 7.47e-15 78.6
Msa0166250 AT4G17080.1 34.109 129 85 0 53 181 305 433 3.25e-13 73.6
Msa0166250 AT2G35170.1 33.548 155 103 0 78 232 230 384 5.90e-21 97.8
Msa0166250 AT2G35170.1 35.135 148 96 0 56 203 254 401 1.08e-20 96.7
Msa0166250 AT2G35170.1 32.353 170 115 0 56 225 231 400 8.25e-20 94.0
Msa0166250 AT2G35170.1 35.211 142 92 0 53 194 274 415 2.36e-15 80.1
Msa0166250 AT2G35170.1 34.586 133 64 2 101 233 230 339 1.01e-13 75.1
Msa0166250 AT1G21920.1 32.727 165 111 0 68 232 168 332 7.41e-21 96.7
Msa0166250 AT1G21920.1 35.135 148 96 0 56 203 202 349 5.93e-19 90.9
Msa0166250 AT1G21920.1 31.159 138 72 2 96 233 173 287 6.69e-13 72.0
Msa0166250 AT1G21920.2 32.727 165 111 0 68 232 168 332 1.45e-20 95.1
Msa0166250 AT1G21920.2 35.135 148 96 0 56 203 202 349 1.07e-18 89.4
Msa0166250 AT1G21920.2 31.159 138 72 2 96 233 173 287 1.87e-12 70.1
Msa0166250 AT1G75010.1 25.676 148 87 1 56 203 607 731 2.30e-12 71.2
Msa0166250 AT1G75010.1 31.496 127 87 0 99 225 604 730 3.83e-11 67.4
Msa0166250 AT1G71010.1 30.882 204 121 8 457 645 1378 1576 8.84e-11 66.6

Find 262 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTAGGTCAGACTTTC+TGG 0.032461 1_4:+47452472 None:intergenic
CATTTGATGGGAACACTTTC+TGG 0.101303 1_4:+47445438 None:intergenic
GGCTAACGGAAATGTATATT+TGG 0.153313 1_4:-47452335 Msa0166250:CDS
CATAGAAGATTTGATTTAAA+AGG 0.178433 1_4:-47448137 Msa0166250:CDS
CATATATTCACGCTCCAAAA+TGG 0.193595 1_4:+47451787 None:intergenic
CCCTTGAAACTTTGTCCTTT+TGG 0.197545 1_4:+47452959 None:intergenic
TAACGAAAAGATCCCCATTT+TGG 0.204980 1_4:-47451801 Msa0166250:CDS
TAACACTGCTTCAGTTGATA+TGG 0.226428 1_4:-47452026 Msa0166250:CDS
GAAGTTCGAGCATCGGATTT+TGG 0.230682 1_4:-47450583 Msa0166250:CDS
GGAAAACGAGTAGGGAAATT+TGG 0.232720 1_4:-47454343 Msa0166250:five_prime_UTR
CCGTTTGTCAATATAGATAT+AGG 0.267813 1_4:+47452757 None:intergenic
ATTCTACTCTCGTCGCTTCC+TGG 0.269786 1_4:-47445468 Msa0166250:CDS
GGTATCTGCTCTGCCCTTGC+TGG 0.270097 1_4:+47445650 None:intergenic
CCCGGTGAACAAATTATTAA+AGG 0.280312 1_4:-47451662 Msa0166250:CDS
TTTGAAGGAAGCTGGTTAAA+TGG 0.303077 1_4:-47452250 Msa0166250:CDS
GTCAATTGAGAACCTTCTTT+AGG 0.304786 1_4:+47450532 None:intergenic
ATGGACTATAGTCTTCTTCT+AGG 0.307126 1_4:-47447402 Msa0166250:CDS
TGAGACTGACAGCAAGTTCT+TGG 0.307848 1_4:-47447439 Msa0166250:CDS
CTGGCATGTTCACACCTAAC+TGG 0.309968 1_4:+47445669 None:intergenic
CTTTATCCTGGCACATTTGA+TGG 0.312989 1_4:+47445425 None:intergenic
GATGGCAGACAGCTTCCTTT+TGG 0.316804 1_4:+47452130 None:intergenic
GAATACCACTCTTAAAGATT+TGG 0.317905 1_4:-47448072 Msa0166250:CDS
CAGTTCCGCTTTGTTGTAAT+GGG 0.331322 1_4:-47448188 Msa0166250:CDS
TGAAAGGCGGTGGAGTTTAG+AGG 0.341412 1_4:-47451903 Msa0166250:CDS
GAGATTGATCCAGATTTAAC+AGG 0.341541 1_4:+47451945 None:intergenic
GGGAAAATACAATGGCCTTC+TGG 0.345502 1_4:-47452556 Msa0166250:CDS
CACAGAAAACCTGTTAAATC+TGG 0.351274 1_4:-47451954 Msa0166250:CDS
CGGCAACGTTCCCGAGGGTC+AGG 0.351945 1_4:-47452647 Msa0166250:CDS
CGCATATACTTGGGGTGATG+GGG 0.352244 1_4:-47452209 Msa0166250:CDS
CTGGCCCCTCAGGATTTCCT+TGG 0.353999 1_4:+47452371 None:intergenic
ATTACTGCCCTATGGTGTTC+AGG 0.369775 1_4:-47450474 Msa0166250:intron
CAGGCAAAGGAACCCTTACC+TGG 0.372399 1_4:-47452288 Msa0166250:CDS
TTAGTTTGCAGCTCGGAATA+AGG 0.372857 1_4:-47451616 Msa0166250:intron
CCTAATGGCGAGTCATATTC+CGG 0.375150 1_4:-47452679 Msa0166250:CDS
GAATCGCCATCGACCTTTGT+AGG 0.376437 1_4:+47452459 None:intergenic
CACGGTACAGGATCATATAT+TGG 0.377388 1_4:-47452496 Msa0166250:CDS
GGTCATTCCACTGAAATTGC+TGG 0.377930 1_4:-47452727 Msa0166250:CDS
GCAGTTCCGCTTTGTTGTAA+TGG 0.378074 1_4:-47448189 Msa0166250:intron
TCTTGTAGCTGTTGAGAATC+CGG 0.379553 1_4:-47452896 Msa0166250:five_prime_UTR
AGGGGCCAGGCAAGTATACC+TGG 0.381587 1_4:-47452357 Msa0166250:CDS
ATGGTCTTGGCGCATATACT+TGG 0.382832 1_4:-47452219 Msa0166250:CDS
GAGATATATTTGAAGGCTCT+TGG 0.382922 1_4:-47452396 Msa0166250:CDS
GTTTGATTCGTTATCTATAT+CGG 0.383128 1_4:-47445504 Msa0166250:CDS
GCCTTTAATAATTTGTTCAC+CGG 0.383988 1_4:+47451661 None:intergenic
TCGAACTTCTCGTCTCTGTA+TGG 0.387041 1_4:+47450597 None:intergenic
GCGCATATACTTGGGGTGAT+GGG 0.388619 1_4:-47452210 Msa0166250:CDS
AAGGTCTTGTTCTGGTCCCT+CGG 0.390579 1_4:-47446447 Msa0166250:CDS
CGAACTTCTCGTCTCTGTAT+GGG 0.392097 1_4:+47450598 None:intergenic
GGGATAGTTATAATTCTATA+AGG 0.394517 1_4:-47452875 Msa0166250:five_prime_UTR
TTGCTTGCTGGCTATAGTCT+AGG 0.394631 1_4:+47454302 None:intergenic
CGTGGCCACAGTTAGTAGTT+TGG 0.396056 1_4:-47452818 Msa0166250:CDS
TTCACATGATGATGATAATC+TGG 0.397576 1_4:+47448511 None:intergenic
ACAAAGCATGCATGCACAAA+AGG 0.398202 1_4:+47445345 None:intergenic
GTATACTTGCCTGGCCCCTC+AGG 0.398524 1_4:+47452361 None:intergenic
CCATCTGAACTTATACTAAC+AGG 0.402778 1_4:+47447345 None:intergenic
CTTTGTAGGTCAGACTTTCT+GGG 0.403996 1_4:+47452473 None:intergenic
AGAATAAAGTCAAGTGTTGT+AGG 0.407972 1_4:+47454248 None:intergenic
ATATATTCACGCTCCAAAAT+GGG 0.411809 1_4:+47451788 None:intergenic
CCGGAATATGACTCGCCATT+AGG 0.412364 1_4:+47452679 None:intergenic
GGCGCATATACTTGGGGTGA+TGG 0.412463 1_4:-47452211 Msa0166250:CDS
CAAAGCATCATTTCCACAAA+TGG 0.412721 1_4:+47449315 None:intergenic
CTCATCGATTTCTATCTTGT+CGG 0.415967 1_4:+47448094 None:intergenic
ATTCATCCAAAAGCTTGCTT+TGG 0.417999 1_4:+47450558 None:intergenic
TAACAGGAGGACGCAGCTGC+TGG 0.418233 1_4:+47447361 None:intergenic
TTGGTGCCAAAGCAAGCTTT+TGG 0.418662 1_4:-47450564 Msa0166250:CDS
GCTAACGGAAATGTATATTT+GGG 0.418772 1_4:-47452334 Msa0166250:CDS
GATTTAAAAGGTTCATCCCT+TGG 0.420681 1_4:-47448125 Msa0166250:CDS
TCATATTCCGGATCCCTTCT+CGG 0.428398 1_4:-47452667 Msa0166250:CDS
AGGTCTTGTTCTGGTCCCTC+GGG 0.429600 1_4:-47446446 Msa0166250:CDS
CTATCCTCAAGGTCTTGTTC+TGG 0.430649 1_4:-47446455 Msa0166250:CDS
TAGTATAAGTTCAGATGGTT+TGG 0.431889 1_4:-47447340 Msa0166250:CDS
CCTTCAAATATATCTCCATT+TGG 0.434696 1_4:+47452403 None:intergenic
TTTGGTGAGACCCGGAGAAC+AGG 0.435312 1_4:-47451992 Msa0166250:CDS
ACGGAACACCACCTGTTCTC+CGG 0.436364 1_4:+47451981 None:intergenic
GCATATACTTGGGGTGATGG+GGG 0.437543 1_4:-47452208 Msa0166250:CDS
GGTTATCAAGTTTATCCAAA+TGG 0.441746 1_4:-47452418 Msa0166250:CDS
GATATGGGAAATGCTAGATT+TGG 0.444711 1_4:-47452010 Msa0166250:CDS
TTACTTGGAGCCGTCTTGGC+GGG 0.446907 1_4:-47448033 Msa0166250:CDS
CGATTGCGAGCTTCAGCTGC+TGG 0.449991 1_4:-47446376 Msa0166250:CDS
ATGAAAGGTGGGACAATGTC+AGG 0.450369 1_4:-47452307 Msa0166250:CDS
AGCTGCTGGTGACGAGGAGG+TGG 0.451559 1_4:-47446362 Msa0166250:CDS
CCAAATGGAGATATATTTGA+AGG 0.451632 1_4:-47452403 Msa0166250:CDS
AGATTTGAGAAAACAGAATC+AGG 0.458804 1_4:-47452059 Msa0166250:CDS
AACGTTGCCGAGAAGGGATC+CGG 0.460862 1_4:+47452660 None:intergenic
AGACATGCATAATGATCAAA+AGG 0.461373 1_4:+47452846 None:intergenic
ATATGATGGTGAGTGGAGAC+GGG 0.461506 1_4:-47452596 Msa0166250:CDS
CATATACTTGGGGTGATGGG+GGG 0.462159 1_4:-47452207 Msa0166250:CDS
CAAAACGAAACGAAACTCAT+TGG 0.463122 1_4:-47454364 Msa0166250:five_prime_UTR
TATATGATGGTGAGTGGAGA+CGG 0.465323 1_4:-47452597 Msa0166250:CDS
AGAACAGGTGGTGTTCCGTC+TGG 0.468196 1_4:-47451977 Msa0166250:CDS
AAGATTACAACATGACTAAG+AGG 0.470669 1_4:-47445553 Msa0166250:CDS
CGGAACACCACCTGTTCTCC+GGG 0.474120 1_4:+47451982 None:intergenic
TTATAGAATTATAACTATCC+CGG 0.476448 1_4:+47452877 None:intergenic
CTATGTTGGGACATGGACAC+GGG 0.476652 1_4:-47452182 Msa0166250:CDS
TGCAGACTTCAAATCCAGTT+AGG 0.478493 1_4:-47445683 Msa0166250:intron
CGTTTGTCAATATAGATATA+GGG 0.484716 1_4:+47452758 None:intergenic
GCAAGGGCAGAGCAGATACC+AGG 0.484764 1_4:-47445647 Msa0166250:CDS
TTGAGAGAACTATCGTCTCC+AGG 0.486817 1_4:-47449295 Msa0166250:CDS
GCTATGTTGGGACATGGACA+CGG 0.491026 1_4:-47452183 Msa0166250:CDS
AGACAAGAATGGTTGCAGAT+AGG 0.491551 1_4:+47452916 None:intergenic
CTTGGAGGAACAGCACATAA+TGG 0.491731 1_4:-47447421 Msa0166250:CDS
ATATTGACAAACGGCGAAGC+TGG 0.492267 1_4:-47452748 Msa0166250:CDS
CAAGGAAATCCTGAGGGGCC+AGG 0.493390 1_4:-47452370 Msa0166250:CDS
CCTGTTAGTATAAGTTCAGA+TGG 0.493551 1_4:-47447345 Msa0166250:CDS
AACACTGCTTCAGTTGATAT+GGG 0.495094 1_4:-47452025 Msa0166250:CDS
AGGGTCAGGGTAAGTATGTA+TGG 0.497129 1_4:-47452633 Msa0166250:CDS
GCAAGAATGTTTCTCTTGAA+AGG 0.498157 1_4:-47451919 Msa0166250:CDS
ATGTTTCTCTTGAAAGGCGG+TGG 0.498163 1_4:-47451913 Msa0166250:CDS
GTTAACCTCTTTATTTCCAT+CGG 0.499478 1_4:+47451820 None:intergenic
GTAGCTATTGAGAAAGTGAT+TGG 0.500108 1_4:-47451881 Msa0166250:CDS
AACAGGAGGACGCAGCTGCT+GGG 0.500261 1_4:+47447362 None:intergenic
GGGGAACTCTCTCTTCCTAA+TGG 0.501996 1_4:-47452694 Msa0166250:CDS
TTTGAAGGCTCTTGGATCCA+AGG 0.502212 1_4:-47452388 Msa0166250:CDS
TATACCTTCAAGTGGCCAAA+AGG 0.503382 1_4:-47448440 Msa0166250:intron
AATGGTATGATGCATGGTCT+TGG 0.506505 1_4:-47452232 Msa0166250:CDS
TTCGTTATCTATATCGGCGG+TGG 0.508660 1_4:-47445498 Msa0166250:CDS
GAGACTCGTTTGAAGGAAGC+TGG 0.508961 1_4:-47452258 Msa0166250:CDS
CTCGGGAACGTTGCCGAGAA+GGG 0.509049 1_4:+47452654 None:intergenic
GCCAAAAGGACAAAGTTTCA+AGG 0.509283 1_4:-47452960 Msa0166250:five_prime_UTR
AAGTTACTCAAACTTTATCC+TGG 0.509319 1_4:+47445413 None:intergenic
TTCAATCTTAAACATGGCCT+AGG 0.509691 1_4:-47452439 Msa0166250:CDS
GTAAGTGGAGACTCGTTTGA+AGG 0.510136 1_4:-47452265 Msa0166250:CDS
AGTCTCCACTTACCCAGGTA+AGG 0.510329 1_4:+47452275 None:intergenic
CTTGTAGCTGTTGAGAATCC+GGG 0.511102 1_4:-47452895 Msa0166250:five_prime_UTR
GTCCCTCGGGGAGCAGATGA+TGG 0.512041 1_4:-47446433 Msa0166250:CDS
CCTCGGGAACGTTGCCGAGA+AGG 0.514362 1_4:+47452653 None:intergenic
TTGTATGAAGGTGAATTCTC+TGG 0.515684 1_4:-47452529 Msa0166250:CDS
TTTATCCTGGCACATTTGAT+GGG 0.518514 1_4:+47445426 None:intergenic
TTTACTTGGAGCCGTCTTGG+CGG 0.518574 1_4:-47448034 Msa0166250:CDS
AGATATACTTCTTGTGCAGA+TGG 0.519993 1_4:+47452112 None:intergenic
TAAACTAACCTGAACACCAT+AGG 0.523925 1_4:+47450466 None:intergenic
GGAACCCTTACCTGGGTAAG+TGG 0.524147 1_4:-47452280 Msa0166250:CDS
AAGAATTACCTTGCAGTACC+AGG 0.524982 1_4:+47446328 None:intergenic
ACTGAGAAGATCAGAAGTAA+AGG 0.525732 1_4:-47449218 Msa0166250:intron
GGTGGCTATATCCACGGTAC+AGG 0.525855 1_4:-47452508 Msa0166250:CDS
GAACTTCTCGTCTCTGTATG+GGG 0.526707 1_4:+47450599 None:intergenic
GACTGACAGCAAGTTCTTGG+AGG 0.527070 1_4:-47447436 Msa0166250:CDS
TGATTCACAATTTGCCTCAA+CGG 0.528838 1_4:-47451855 Msa0166250:CDS
ATGGAAAGATTACTGCCCTA+TGG 0.530066 1_4:-47450482 Msa0166250:CDS
ACATACTTACCCTGACCCTC+GGG 0.531555 1_4:+47452637 None:intergenic
CAAAGCATGCATGCACAAAA+GGG 0.532040 1_4:+47445346 None:intergenic
GATGATGGTAGTGTTGTTGT+CGG 0.532990 1_4:-47446418 Msa0166250:CDS
TGGTCTTGGCGCATATACTT+GGG 0.533338 1_4:-47452218 Msa0166250:CDS
TACATACTTACCCTGACCCT+CGG 0.534192 1_4:+47452636 None:intergenic
GACTACATGATGTCCATTTG+TGG 0.535966 1_4:-47449328 Msa0166250:CDS
ATTTGGGAAATATGAAAGGT+GGG 0.536411 1_4:-47452318 Msa0166250:CDS
GTGTTCCCATCAAATGTGCC+AGG 0.537171 1_4:-47445431 Msa0166250:CDS
CCTTTAATAATTTGTTCACC+GGG 0.538422 1_4:+47451662 None:intergenic
AGAGCAGATACCAGGAAAAG+AGG 0.538731 1_4:-47445639 Msa0166250:CDS
AAATTGCCAAAGATATCAAA+AGG 0.539194 1_4:-47451685 Msa0166250:CDS
ACACTTTCTGGATAAAATCC+AGG 0.539376 1_4:+47445450 None:intergenic
CCTATATCTATATTGACAAA+CGG 0.539708 1_4:-47452757 Msa0166250:CDS
TTATGACGTCGTACTATACC+TGG 0.539798 1_4:-47445594 Msa0166250:CDS
TATTTGGGAAATATGAAAGG+TGG 0.542050 1_4:-47452319 Msa0166250:CDS
GCCAAAGATATCAAAAGGCC+CGG 0.542683 1_4:-47451680 Msa0166250:CDS
CTATCGTCTCCAGGGAAAAG+TGG 0.543810 1_4:-47449286 Msa0166250:CDS
AGCTTCAGCTGCTGGTGACG+AGG 0.544007 1_4:-47446368 Msa0166250:CDS
TTAGCCCAGGTATACTTGCC+TGG 0.547788 1_4:+47452352 None:intergenic
AAGCGACGAGAGTAGAATGT+AGG 0.549703 1_4:+47445473 None:intergenic
AAACTCATTGGAAAACGAGT+AGG 0.551600 1_4:-47454352 Msa0166250:five_prime_UTR
ACAGGAGGACGCAGCTGCTG+GGG 0.554405 1_4:+47447363 None:intergenic
GGTAAGTATGTATGGTCAGA+TGG 0.555310 1_4:-47452625 Msa0166250:CDS
AGTTTCAAGGGTCAATCACT+TGG 0.555849 1_4:-47452947 Msa0166250:five_prime_UTR
ACGGATTCAGTCTTCGCCGA+TGG 0.557719 1_4:-47451836 Msa0166250:CDS
AACAAATTATTAAAGGCCAC+AGG 0.558304 1_4:-47451655 Msa0166250:CDS
TAAAGTCAAGTGTTGTAGGT+GGG 0.558407 1_4:+47454252 None:intergenic
TCAGTGTCTTGATCATGAAA+CGG 0.559373 1_4:+47449236 None:intergenic
ATATGTTCTGCACAGAATTG+AGG 0.559541 1_4:-47448163 Msa0166250:CDS
TTCTCTGGTGGCTATATCCA+CGG 0.561216 1_4:-47452514 Msa0166250:CDS
TTGGCAATGCTTGCAGAGGA+AGG 0.564272 1_4:-47447321 Msa0166250:intron
CAGCAGCTGAAGCTCGCAAT+CGG 0.564387 1_4:+47446377 None:intergenic
AAACTAACCTGAACACCATA+GGG 0.565431 1_4:+47450467 None:intergenic
CCTTCTGGTGTGTTGTATGA+AGG 0.565486 1_4:-47452541 Msa0166250:CDS
TTGGATAAACTTGATAACCT+AGG 0.565805 1_4:+47452422 None:intergenic
GTTGTCGGGTCACACATTAG+AGG 0.566169 1_4:-47446403 Msa0166250:CDS
AACTCATTGGAAAACGAGTA+GGG 0.569155 1_4:-47454351 Msa0166250:five_prime_UTR
TCTTGTCGGAAGAACGTCCA+AGG 0.570830 1_4:+47448108 None:intergenic
ATATACATTTCCGTTAGCCC+AGG 0.571683 1_4:+47452339 None:intergenic
CCTTCTCGGCAACGTTCCCG+AGG 0.572618 1_4:-47452653 Msa0166250:CDS
GTATATTTGGGAAATATGAA+AGG 0.572931 1_4:-47452322 Msa0166250:CDS
TGGACACGGGGTCTTAAAGA+TGG 0.577970 1_4:-47452169 Msa0166250:CDS
TTGGAGCGTGAATATATGCA+AGG 0.578663 1_4:-47451782 Msa0166250:CDS
ATGCTAGATTTGGTGAGACC+CGG 0.578871 1_4:-47452000 Msa0166250:CDS
GGCAAGTATACCTGGGCTAA+CGG 0.580636 1_4:-47452349 Msa0166250:CDS
TATATACTTCATCCTCTAGA+GGG 0.582725 1_4:+47446479 None:intergenic
CTTCGCCGATGGAAATAAAG+AGG 0.582727 1_4:-47451825 Msa0166250:CDS
CAAACTACTAACTGTGGCCA+CGG 0.585273 1_4:+47452819 None:intergenic
CAACAGCTACAAGACAAGAA+TGG 0.585911 1_4:+47452905 None:intergenic
GGCAACGTTCCCGAGGGTCA+GGG 0.586924 1_4:-47452646 Msa0166250:CDS
CACAGGATTATACCTTCAAG+TGG 0.587271 1_4:-47448448 Msa0166250:CDS
ATGATGGTAGTGTTGTTGTC+GGG 0.587597 1_4:-47446417 Msa0166250:CDS
CAAATCCAAATCTTTAAGAG+TGG 0.589290 1_4:+47448067 None:intergenic
TAGGTGTGAACATGCCAGCA+AGG 0.591715 1_4:-47445664 Msa0166250:CDS
TTCTTCTACCTGGTACTGCA+AGG 0.594688 1_4:-47446336 Msa0166250:intron
GAGACGAGAAGTTCGAGCAT+CGG 0.594986 1_4:-47450590 Msa0166250:CDS
CCTTCATACAACACACCAGA+AGG 0.602183 1_4:+47452541 None:intergenic
TTCAGCTGCTGGTGACGAGG+AGG 0.602690 1_4:-47446365 Msa0166250:CDS
CCAAAAGGACAAAGTTTCAA+GGG 0.603673 1_4:-47452959 Msa0166250:five_prime_UTR
ATAAAGTCAAGTGTTGTAGG+TGG 0.605120 1_4:+47454251 None:intergenic
TGGATCCAAGGAAATCCTGA+GGG 0.606779 1_4:-47452376 Msa0166250:CDS
TTATATACTTCATCCTCTAG+AGG 0.607130 1_4:+47446478 None:intergenic
TATATTCACGCTCCAAAATG+GGG 0.608393 1_4:+47451789 None:intergenic
AATAAAGACTCCCGCCAAGA+CGG 0.610613 1_4:+47448023 None:intergenic
ATTGACACCTCCTCATCAGT+CGG 0.612372 1_4:-47450515 Msa0166250:CDS
TGGAGCGTGAATATATGCAA+GGG 0.612966 1_4:-47451781 Msa0166250:CDS
TGAGAGAACTATCGTCTCCA+GGG 0.613070 1_4:-47449294 Msa0166250:CDS
GCAATATATCAATGATACCC+AGG 0.613082 1_4:+47445576 None:intergenic
CCAGAAAGTCTGACCTACAA+AGG 0.613083 1_4:-47452472 Msa0166250:CDS
GTCTGACCTACAAAGGTCGA+TGG 0.613814 1_4:-47452465 Msa0166250:CDS
TATGATGGTGAGTGGAGACG+GGG 0.614874 1_4:-47452595 Msa0166250:CDS
GTTGTGTATATGATGGTGAG+TGG 0.615250 1_4:-47452603 Msa0166250:CDS
AGGTGTGAACATGCCAGCAA+GGG 0.616410 1_4:-47445663 Msa0166250:CDS
CTGATGCTTAGTTTGCAGCT+CGG 0.616521 1_4:-47451623 Msa0166250:CDS
TCAAATGGCTAGGTATACTG+TGG 0.619000 1_4:-47450632 Msa0166250:intron
GTCTCCACTTACCCAGGTAA+GGG 0.619943 1_4:+47452276 None:intergenic
GCAAGGGGTATTAATAAGTG+AGG 0.622233 1_4:-47451765 Msa0166250:CDS
TGGTTTGGCAATGCTTGCAG+AGG 0.623080 1_4:-47447325 Msa0166250:CDS
TTAAAATCCTCCGACTGATG+AGG 0.624649 1_4:+47450505 None:intergenic
TACCATCATCTGCTCCCCGA+GGG 0.625035 1_4:+47446431 None:intergenic
GAAGTATATAACTATCCTCA+AGG 0.626789 1_4:-47446466 Msa0166250:CDS
TGGCGATTCAATCTTAAACA+TGG 0.628373 1_4:-47452445 Msa0166250:CDS
GGTCTTGGCGCATATACTTG+GGG 0.631149 1_4:-47452217 Msa0166250:CDS
TCTAAAACCAGCAATTTCAG+TGG 0.631528 1_4:+47452720 None:intergenic
ATGGATTTGGGAAAATACAA+TGG 0.632638 1_4:-47452564 Msa0166250:CDS
GGTGGGACAATGTCAGGCAA+AGG 0.633057 1_4:-47452301 Msa0166250:CDS
CTTCTCGGCAACGTTCCCGA+GGG 0.634639 1_4:-47452652 Msa0166250:CDS
GAGGTGGATCTTCTTCTACC+TGG 0.635208 1_4:-47446346 Msa0166250:CDS
AACTTCTCGTCTCTGTATGG+GGG 0.638602 1_4:+47450600 None:intergenic
AAATCCTCCGACTGATGAGG+AGG 0.639574 1_4:+47450508 None:intergenic
AAACGAGTCTCCACTTACCC+AGG 0.643861 1_4:+47452270 None:intergenic
TATGAAGGTGAATTCTCTGG+TGG 0.644862 1_4:-47452526 Msa0166250:CDS
ATGATGGTGAGTGGAGACGG+GGG 0.645871 1_4:-47452594 Msa0166250:CDS
TTGGATCCAAGGAAATCCTG+AGG 0.646382 1_4:-47452377 Msa0166250:CDS
ATTATGCATGTCTGGCTCCG+TGG 0.646691 1_4:-47452836 Msa0166250:exon
GCATCAGATCATAACTCCTG+TGG 0.647690 1_4:+47451639 None:intergenic
CGGGGTCTTAAAGATGGCAA+AGG 0.648365 1_4:-47452163 Msa0166250:CDS
GGTGAGACCCGGAGAACAGG+TGG 0.648651 1_4:-47451989 Msa0166250:CDS
ATCAACTACAGACCCTCTAG+AGG 0.651251 1_4:-47446491 Msa0166250:intron
TGGTTAAATGGTATGATGCA+TGG 0.651397 1_4:-47452238 Msa0166250:CDS
CAAATGGCTAGGTATACTGT+GGG 0.653802 1_4:-47450631 Msa0166250:intron
CTTGTCGGAAGAACGTCCAA+GGG 0.656049 1_4:+47448109 None:intergenic
AGAATGTTTCTCTTGAAAGG+CGG 0.656927 1_4:-47451916 Msa0166250:CDS
GGTCTTGTTCTGGTCCCTCG+GGG 0.658058 1_4:-47446445 Msa0166250:CDS
TTTCAACTTTCAATTCAACA+AGG 0.658064 1_4:-47454220 Msa0166250:intron
GGAGCGTGAATATATGCAAG+GGG 0.659260 1_4:-47451780 Msa0166250:CDS
TCAGATGGTTGTGTATATGA+TGG 0.660600 1_4:-47452610 Msa0166250:CDS
TATTTCCCATTACAACAAAG+CGG 0.665063 1_4:+47448183 None:intergenic
CTACCATCATCTGCTCCCCG+AGG 0.672666 1_4:+47446430 None:intergenic
TATGACGTCGTACTATACCT+GGG 0.673057 1_4:-47445593 Msa0166250:CDS
GACACCTCCTCATCAGTCGG+AGG 0.674116 1_4:-47450512 Msa0166250:CDS
GGCGAAGACTGAATCCGTTG+AGG 0.675390 1_4:+47451841 None:intergenic
AGGCAAAGGAACCCTTACCT+GGG 0.686161 1_4:-47452287 Msa0166250:CDS
GTACGACGTCATAAGCCTCG+TGG 0.687876 1_4:+47445603 None:intergenic
TCGATCCAAACTACTAACTG+TGG 0.690124 1_4:+47452813 None:intergenic
TGATTCGTTATCTATATCGG+CGG 0.703435 1_4:-47445501 Msa0166250:CDS
GGGGCCAGGCAAGTATACCT+GGG 0.703812 1_4:-47452356 Msa0166250:CDS
TCTGAACTTATACTAACAGG+AGG 0.705844 1_4:+47447348 None:intergenic
TATGTTGGGACATGGACACG+GGG 0.713292 1_4:-47452181 Msa0166250:CDS
GGGACCAGAACAAGACCTTG+AGG 0.724705 1_4:+47446451 None:intergenic
CAATATATGATCCTGTACCG+TGG 0.736323 1_4:+47452497 None:intergenic
GGATCCAAGGAAATCCTGAG+GGG 0.751805 1_4:-47452375 Msa0166250:CDS
GGAAACTCAAATGTTCCACG+AGG 0.778032 1_4:-47445618 Msa0166250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATATGATATGAAT+GGG - chr1_4:47446631-47446650 Msa0166250:intron 10.0%
!!! ATTATACTTTTTTTTTTCTT+CGG - chr1_4:47448690-47448709 Msa0166250:intron 10.0%
!! TTAAAATTATAGAAACAATA+TGG + chr1_4:47449439-47449458 None:intergenic 10.0%
!! AATAAAAAAACAATAATAGT+AGG - chr1_4:47449675-47449694 Msa0166250:intron 10.0%
!! ATAAAAAAACAATAATAGTA+GGG - chr1_4:47449676-47449695 Msa0166250:intron 10.0%
!!! AAGAAAATAATTTTTTTGTT+TGG + chr1_4:47451431-47451450 None:intergenic 10.0%
!!! AATAAAATATTTTCTTACAA+TGG + chr1_4:47451726-47451745 None:intergenic 10.0%
!!! AAGAATATTTTCTTATATAT+AGG - chr1_4:47451945-47451964 Msa0166250:CDS 10.0%
!! CATTCATATCATATAAAAAA+AGG + chr1_4:47446632-47446651 None:intergenic 15.0%
!!! CTTTTTTTATATGATATGAA+TGG - chr1_4:47446630-47446649 Msa0166250:intron 15.0%
!!! TAATTAACTTGAATTGTTAA+TGG + chr1_4:47448613-47448632 None:intergenic 15.0%
!!! TATAATTTTAAAAGTCTGTT+TGG - chr1_4:47449448-47449467 Msa0166250:intron 15.0%
!! TTTATTTATGTTACTATCAT+GGG + chr1_4:47449661-47449680 None:intergenic 15.0%
!!! TTTTATTTATGTTACTATCA+TGG + chr1_4:47449662-47449681 None:intergenic 15.0%
!! TAAAAAAACAATAATAGTAG+GGG - chr1_4:47449677-47449696 Msa0166250:intron 15.0%
!! AAAAAGAAATAAAGTAGATT+TGG - chr1_4:47450156-47450175 Msa0166250:intron 15.0%
!!! TAAGAAAATATTTTATTCCT+AGG - chr1_4:47451729-47451748 Msa0166250:CDS 15.0%
!!! AAGAATCTTTTCTTATATAT+AGG + chr1_4:47451846-47451865 None:intergenic 15.0%
!! TTATTAAATTTGTACATTTG+AGG - chr1_4:47451983-47452002 Msa0166250:CDS 15.0%
!!! TGAACATGTAAAATATTTTA+AGG - chr1_4:47452050-47452069 Msa0166250:CDS 15.0%
!!! ATTTTGGATTTGTTTTATAT+TGG - chr1_4:47452917-47452936 Msa0166250:five_prime_UTR 15.0%
!! TATAATTGTAAAACTTTGAT+TGG + chr1_4:47453007-47453026 None:intergenic 15.0%
!! TTACAATTATATGATGATTA+TGG - chr1_4:47453016-47453035 Msa0166250:intron 15.0%
!!! ATCATTTTAGAAATTCTTAT+AGG - chr1_4:47453044-47453063 Msa0166250:intron 15.0%
!! AATTCTGAATAAAAATAATC+TGG + chr1_4:47454295-47454314 None:intergenic 15.0%
!!! AATTCTAAAATCAAAAGCTA+CGG - chr1_4:47445688-47445707 Msa0166250:intron 20.0%
!! AGTCAAAATCAATTAAATTC+TGG - chr1_4:47445724-47445743 Msa0166250:intron 20.0%
!!! TTTAGCAATTTTTGTGTTAT+GGG - chr1_4:47445859-47445878 Msa0166250:intron 20.0%
!! TATATAAAAAACAGAGTAGT+CGG + chr1_4:47446031-47446050 None:intergenic 20.0%
!! CAATATAATCATACACAAAA+TGG + chr1_4:47446187-47446206 None:intergenic 20.0%
!!! TTATATTGTTTTTCTCCTTT+TGG - chr1_4:47446199-47446218 Msa0166250:intron 20.0%
!! AAAAAATCATAAGAACCAAA+AGG + chr1_4:47446217-47446236 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr1_4:47446349-47446368 Msa0166250:CDS 20.0%
!! TTATAGAATTATAACTATCC+CGG + chr1_4:47446805-47446824 None:intergenic 20.0%
!! TGGTTAAAAAACAAATATAG+GGG + chr1_4:47448506-47448525 None:intergenic 20.0%
!! GTGGTTAAAAAACAAATATA+GGG + chr1_4:47448507-47448526 None:intergenic 20.0%
!! TGTGGTTAAAAAACAAATAT+AGG + chr1_4:47448508-47448527 None:intergenic 20.0%
!! AAATAGTATTTGTTTGCTTA+AGG + chr1_4:47448831-47448850 None:intergenic 20.0%
!!! ACTTAATTTCTTCTAAAGTT+TGG + chr1_4:47448966-47448985 None:intergenic 20.0%
!! TAGAAGAAATTAAGTTATTC+TGG - chr1_4:47448971-47448990 Msa0166250:intron 20.0%
!! TTCTGTAAGTAACTTAAAAA+TGG - chr1_4:47449021-47449040 Msa0166250:intron 20.0%
!! TCTGTAAGTAACTTAAAAAT+GGG - chr1_4:47449022-47449041 Msa0166250:intron 20.0%
!!! AGGTTAGTTTAAACTTTTTT+AGG - chr1_4:47449225-47449244 Msa0166250:CDS 20.0%
!!! TAGAATTGTTTTTGTATACA+TGG - chr1_4:47450198-47450217 Msa0166250:intron 20.0%
!! ATATATAACAAGCATATGAA+AGG + chr1_4:47450277-47450296 None:intergenic 20.0%
!!! AATTTTCTATTCTAACTTCT+TGG + chr1_4:47450992-47451011 None:intergenic 20.0%
!!! AGATTTTTTGAATTAACTTG+TGG - chr1_4:47451025-47451044 Msa0166250:intron 20.0%
!!! CTTTTAAATCAAATCTTCTA+TGG + chr1_4:47451544-47451563 None:intergenic 20.0%
!!! CATAGAAGATTTGATTTAAA+AGG - chr1_4:47451542-47451561 Msa0166250:intron 20.0%
!!! TATTTTCTTATATATAGGAC+CGG - chr1_4:47451950-47451969 Msa0166250:CDS 20.0%
!! AAACTTGAAATTCAAACAAA+TGG + chr1_4:47452123-47452142 None:intergenic 20.0%
!! AATAAATGTCAATCACATAA+AGG + chr1_4:47452424-47452443 None:intergenic 20.0%
!!! ATAAAATGCTTTTGTGAAAA+AGG + chr1_4:47452665-47452684 None:intergenic 20.0%
!!! TTTTTTTCTTCTAACTGAAA+CGG - chr1_4:47452941-47452960 Msa0166250:five_prime_UTR 20.0%
!!! TAAGAATTTCTAAAATGATG+TGG + chr1_4:47453043-47453062 None:intergenic 20.0%
!! TTGTTATAGCACTATAATTA+TGG - chr1_4:47453138-47453157 Msa0166250:intron 20.0%
!!! ACTTTTATGTTCATCAAATA+CGG - chr1_4:47453481-47453500 Msa0166250:intron 20.0%
!! ATATTCTAGCAACTATTTAA+TGG + chr1_4:47453939-47453958 None:intergenic 20.0%
!!! TTTTATTCAGAATTTGTGAA+CGG - chr1_4:47454301-47454320 Msa0166250:five_prime_UTR 20.0%
!! GTTTCGTTTTGTATTCTAAT+CGG + chr1_4:47445306-47445325 None:intergenic 25.0%
! TTTCAACTTTCAATTCAACA+AGG - chr1_4:47445459-47445478 Msa0166250:CDS 25.0%
! CAAAATCAATTAAATTCTGG+AGG - chr1_4:47445727-47445746 Msa0166250:intron 25.0%
! TGCATTCACATTATATTGAT+CGG + chr1_4:47445807-47445826 None:intergenic 25.0%
!! GTTTAGCAATTTTTGTGTTA+TGG - chr1_4:47445858-47445877 Msa0166250:intron 25.0%
! TTTGTTTGTTTCAATCATGA+CGG - chr1_4:47445934-47445953 Msa0166250:intron 25.0%
! TGTTCAATATAAAGACTTTC+AGG - chr1_4:47446130-47446149 Msa0166250:intron 25.0%
!!! TATAAAGACTTTCAGGTTTA+TGG - chr1_4:47446137-47446156 Msa0166250:intron 25.0%
! ATAATCATACACAAAATGGA+AGG + chr1_4:47446183-47446202 None:intergenic 25.0%
!!! TCAATTTCTTTTAGTTATCG+TGG - chr1_4:47446273-47446292 Msa0166250:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr1_4:47446324-47446343 None:intergenic 25.0%
! ATGATGATAGGAAAATAAGT+GGG + chr1_4:47446598-47446617 None:intergenic 25.0%
! GGGATAGTTATAATTCTATA+AGG - chr1_4:47446804-47446823 Msa0166250:intron 25.0%
! CGTTTGTCAATATAGATATA+GGG + chr1_4:47446924-47446943 None:intergenic 25.0%
! CCTATATCTATATTGACAAA+CGG - chr1_4:47446922-47446941 Msa0166250:intron 25.0%
! GTATATTTGGGAAATATGAA+AGG - chr1_4:47447357-47447376 Msa0166250:CDS 25.0%
! AAATTGCCAAAGATATCAAA+AGG - chr1_4:47447994-47448013 Msa0166250:intron 25.0%
!! TTCTTATGGGAATTTTCATA+TGG - chr1_4:47448252-47448271 Msa0166250:intron 25.0%
! AGAAATGTGGTTATTGAAAA+TGG - chr1_4:47448532-47448551 Msa0166250:CDS 25.0%
! GAAATGTGGTTATTGAAAAT+GGG - chr1_4:47448533-47448552 Msa0166250:intron 25.0%
!! GCTTTGAATATCAGTAATTA+TGG - chr1_4:47448651-47448670 Msa0166250:intron 25.0%
!!! AATGGAATATCTTGCTTTTT+GGG + chr1_4:47448765-47448784 None:intergenic 25.0%
!!! AAATGGAATATCTTGCTTTT+TGG + chr1_4:47448766-47448785 None:intergenic 25.0%
! TATTCCATTTCATTTCCTAT+TGG - chr1_4:47448776-47448795 Msa0166250:intron 25.0%
! ATTCCATTTCATTTCCTATT+GGG - chr1_4:47448777-47448796 Msa0166250:intron 25.0%
! TTATTCCTATTAATGACATG+AGG - chr1_4:47448910-47448929 Msa0166250:intron 25.0%
!!! TTTGGTTCTTTCATTGTATA+TGG + chr1_4:47448939-47448958 None:intergenic 25.0%
!!! TATCAATATTTGCTTTTGCA+TGG - chr1_4:47448996-47449015 Msa0166250:intron 25.0%
! TGATTTAGTAAAGTAAGGAT+TGG + chr1_4:47449312-47449331 None:intergenic 25.0%
! TGTAGTGATTTAGTAAAGTA+AGG + chr1_4:47449317-47449336 None:intergenic 25.0%
!! AATTCAGTAGTTACTTTAAG+AGG + chr1_4:47449408-47449427 None:intergenic 25.0%
! AAGATTGTATAAGGAAAGAA+AGG - chr1_4:47449508-47449527 Msa0166250:intron 25.0%
! AGATTGTATAAGGAAAGAAA+GGG - chr1_4:47449509-47449528 Msa0166250:intron 25.0%
!!! TTGTTTTTGTATACATGGTA+AGG - chr1_4:47450203-47450222 Msa0166250:intron 25.0%
! TATTGATATACAAACTTCCT+TGG - chr1_4:47450533-47450552 Msa0166250:CDS 25.0%
!! TTCCATATTTCATTTTACCT+GGG - chr1_4:47450579-47450598 Msa0166250:CDS 25.0%
!! TTTTTCATATGTACATGATC+CGG - chr1_4:47450814-47450833 Msa0166250:intron 25.0%
! CATGAAGATGTAATAATGAT+AGG + chr1_4:47451408-47451427 None:intergenic 25.0%
! TAAATTACTTTGTTGAAGGA+GGG + chr1_4:47451779-47451798 None:intergenic 25.0%
!! GTTCTAAATTACTTTGTTGA+AGG + chr1_4:47451783-47451802 None:intergenic 25.0%
!! TCTTTTCTTATATATAGGAC+CGG + chr1_4:47451841-47451860 None:intergenic 25.0%
! ATTTAATAATATACTCCCTC+CGG + chr1_4:47451972-47451991 None:intergenic 25.0%
! GAAAGCTAATGTTTAGTAAT+TGG - chr1_4:47452398-47452417 Msa0166250:CDS 25.0%
! ATGTGATTGACATTTATTTC+TGG - chr1_4:47452426-47452445 Msa0166250:CDS 25.0%
!! GATATAAACACTGCTTATTT+TGG - chr1_4:47452549-47452568 Msa0166250:CDS 25.0%
!!! CTGCTTATTTTGGTATTATT+AGG - chr1_4:47452559-47452578 Msa0166250:CDS 25.0%
!! GATGTAAAAGAAAGATTTTC+TGG + chr1_4:47452618-47452637 None:intergenic 25.0%
! GATTGTTTATTAACATGAGA+TGG - chr1_4:47452702-47452721 Msa0166250:CDS 25.0%
!!! AAATGTTAGGAGCTATTTTT+AGG - chr1_4:47452758-47452777 Msa0166250:CDS 25.0%
!! TCTTATTATGTCTTGCATTT+TGG - chr1_4:47452901-47452920 Msa0166250:five_prime_UTR 25.0%
!!! TTTTTTCTTCTAACTGAAAC+GGG - chr1_4:47452942-47452961 Msa0166250:five_prime_UTR 25.0%
! TTATCCGGTTATCTATAATT+TGG - chr1_4:47453068-47453087 Msa0166250:intron 25.0%
! TAGACCAAATTATAGATAAC+CGG + chr1_4:47453075-47453094 None:intergenic 25.0%
! GTAATTCTTCATGAGTTTAA+TGG - chr1_4:47453365-47453384 Msa0166250:intron 25.0%
!! CTTTTATGTTCATCAAATAC+GGG - chr1_4:47453482-47453501 Msa0166250:intron 25.0%
! ACATGTACACATTTAAAAGT+AGG + chr1_4:47453728-47453747 None:intergenic 25.0%
!! ACTTGGGATTATATTGATTA+AGG - chr1_4:47453892-47453911 Msa0166250:intron 25.0%
!! GTTTGATTCGTTATCTATAT+CGG - chr1_4:47454175-47454194 Msa0166250:intron 25.0%
! AGAATAAAGTCAAGTGTTGT+AGG + chr1_4:47445434-47445453 None:intergenic 30.0%
ATATTTAGAGAGAGAAAGAG+AGG + chr1_4:47445493-47445512 None:intergenic 30.0%
TCGAATTTATTGTTCGAATC+AGG + chr1_4:47445657-47445676 None:intergenic 30.0%
TGGTCTGTCATATTTACAAT+CGG - chr1_4:47446438-47446457 Msa0166250:CDS 30.0%
GATGATGATAGGAAAATAAG+TGG + chr1_4:47446599-47446618 None:intergenic 30.0%
GCATAAACAAAGATGATGAT+AGG + chr1_4:47446610-47446629 None:intergenic 30.0%
! ACTTTTCTTTTGTAGCCAAA+AGG - chr1_4:47446705-47446724 Msa0166250:intron 30.0%
AGACATGCATAATGATCAAA+AGG + chr1_4:47446836-47446855 None:intergenic 30.0%
! TTTTGATCATTATGCATGTC+TGG - chr1_4:47446835-47446854 Msa0166250:intron 30.0%
CCGTTTGTCAATATAGATAT+AGG + chr1_4:47446925-47446944 None:intergenic 30.0%
!!! AAATTGCTGGTTTTAGAGTA+GGG - chr1_4:47446965-47446984 Msa0166250:intron 30.0%
ATGGATTTGGGAAAATACAA+TGG - chr1_4:47447115-47447134 Msa0166250:intron 30.0%
! TTGGATAAACTTGATAACCT+AGG + chr1_4:47447260-47447279 None:intergenic 30.0%
GGTTATCAAGTTTATCCAAA+TGG - chr1_4:47447261-47447280 Msa0166250:intron 30.0%
CCTTCAAATATATCTCCATT+TGG + chr1_4:47447279-47447298 None:intergenic 30.0%
CCAAATGGAGATATATTTGA+AGG - chr1_4:47447276-47447295 Msa0166250:intron 30.0%
GCTAACGGAAATGTATATTT+GGG - chr1_4:47447345-47447364 Msa0166250:CDS 30.0%
TATTTGGGAAATATGAAAGG+TGG - chr1_4:47447360-47447379 Msa0166250:CDS 30.0%
ATTTGGGAAATATGAAAGGT+GGG - chr1_4:47447361-47447380 Msa0166250:CDS 30.0%
! AAAGGAACCTTTTATCCAAA+AGG - chr1_4:47447534-47447553 Msa0166250:intron 30.0%
TCAATGCATTGAGAAAAAGA+GGG - chr1_4:47447589-47447608 Msa0166250:intron 30.0%
! TGATTCTGTTTTCTCAAATC+TGG + chr1_4:47447621-47447640 None:intergenic 30.0%
AGATTTGAGAAAACAGAATC+AGG - chr1_4:47447620-47447639 Msa0166250:intron 30.0%
! GTTAACCTCTTTATTTCCAT+CGG + chr1_4:47447862-47447881 None:intergenic 30.0%
ATATATTCACGCTCCAAAAT+GGG + chr1_4:47447894-47447913 None:intergenic 30.0%
!! CCTTTAATAATTTGTTCACC+GGG + chr1_4:47448020-47448039 None:intergenic 30.0%
!! GCCTTTAATAATTTGTTCAC+CGG + chr1_4:47448021-47448040 None:intergenic 30.0%
AACAAATTATTAAAGGCCAC+AGG - chr1_4:47448024-47448043 Msa0166250:CDS 30.0%
TAAGGTAAAAGATACTGTCT+TGG - chr1_4:47448081-47448100 Msa0166250:CDS 30.0%
! AGGAGGTCATAATTTTCTTA+TGG - chr1_4:47448238-47448257 Msa0166250:intron 30.0%
! GGAGGTCATAATTTTCTTAT+GGG - chr1_4:47448239-47448258 Msa0166250:intron 30.0%
! TCAGACAGTTTTTATGTTCA+CGG - chr1_4:47448304-47448323 Msa0166250:intron 30.0%
!! ATTCTTTACAGTTGGTAACA+AGG + chr1_4:47448347-47448366 None:intergenic 30.0%
TACCAACTGTAAAGAATAGA+AGG - chr1_4:47448350-47448369 Msa0166250:intron 30.0%
ACCAACTGTAAAGAATAGAA+GGG - chr1_4:47448351-47448370 Msa0166250:intron 30.0%
AAAACCTCAATCTCTTTAAG+AGG + chr1_4:47448385-47448404 None:intergenic 30.0%
! CTTAAAGAGATTGAGGTTTT+AGG - chr1_4:47448385-47448404 Msa0166250:intron 30.0%
CAAAGCAAAATATAGCTCAA+AGG + chr1_4:47448433-47448452 None:intergenic 30.0%
AATCACTAAATTGTCACTCA+TGG - chr1_4:47448454-47448473 Msa0166250:CDS 30.0%
ATCACTAAATTGTCACTCAT+GGG - chr1_4:47448455-47448474 Msa0166250:CDS 30.0%
GGATTCAAGAAAAAAGAATG+TGG - chr1_4:47448476-47448495 Msa0166250:CDS 30.0%
TTAACCACAGAAAAGAAATG+TGG - chr1_4:47448519-47448538 Msa0166250:CDS 30.0%
! ATAACCACATTTCTTTTCTG+TGG + chr1_4:47448526-47448545 None:intergenic 30.0%
!!! ATGGAATATCTTGCTTTTTG+GGG + chr1_4:47448764-47448783 None:intergenic 30.0%
ATTCCCAATAGGAAATGAAA+TGG + chr1_4:47448783-47448802 None:intergenic 30.0%
TGTTATAGTAGAACTAACAC+AGG - chr1_4:47448874-47448893 Msa0166250:intron 30.0%
!! CTTCTAAAGTTTGGTACATT+TGG + chr1_4:47448957-47448976 None:intergenic 30.0%
! ACTTAAAAATGGGCTTCAAA+TGG - chr1_4:47449032-47449051 Msa0166250:intron 30.0%
! TGGATGAATTTTCCTAAAGA+AGG - chr1_4:47449135-47449154 Msa0166250:intron 30.0%
GTGAAAGGAAAGATTGTATA+AGG - chr1_4:47449499-47449518 Msa0166250:intron 30.0%
!!! AGAGGATTGTTTTAGTTGTT+TGG - chr1_4:47449543-47449562 Msa0166250:intron 30.0%
! TTGTTTGGTTTAAGAGAAAG+TGG - chr1_4:47449558-47449577 Msa0166250:intron 30.0%
! GAGGAAACTCAACATTTTAT+GGG + chr1_4:47449717-47449736 None:intergenic 30.0%
! TGAGGAAACTCAACATTTTA+TGG + chr1_4:47449718-47449737 None:intergenic 30.0%
AAGAATCACTTTCCATTGTT+TGG + chr1_4:47449825-47449844 None:intergenic 30.0%
TATCAGAACACTAGTATGTT+TGG + chr1_4:47449888-47449907 None:intergenic 30.0%
! GTAGGTATTGCAATTTGAAA+TGG + chr1_4:47449970-47449989 None:intergenic 30.0%
AATACCTACTTGACAACTTA+AGG - chr1_4:47449981-47450000 Msa0166250:intron 30.0%
ACTTAAGGTGAATACAAGAA+TGG - chr1_4:47449996-47450015 Msa0166250:intron 30.0%
AAGACATGTAGATTTCATGT+TGG - chr1_4:47450062-47450081 Msa0166250:intron 30.0%
!!! GTAAAGGTGTGTTTATTTTG+TGG - chr1_4:47450477-47450496 Msa0166250:CDS 30.0%
! GTTCCATATTTCATTTTACC+TGG - chr1_4:47450578-47450597 Msa0166250:CDS 30.0%
! AAGTATGTCATTGATAACCA+AGG + chr1_4:47450620-47450639 None:intergenic 30.0%
TCAATGACATACTTGCAAAA+AGG - chr1_4:47450626-47450645 Msa0166250:intron 30.0%
CAATGACATACTTGCAAAAA+GGG - chr1_4:47450627-47450646 Msa0166250:intron 30.0%
AATGACATACTTGCAAAAAG+GGG - chr1_4:47450628-47450647 Msa0166250:intron 30.0%
CGTAACTTATGTAAGAATGA+TGG + chr1_4:47450768-47450787 None:intergenic 30.0%
! TGCATTTAAGTTAATGAAGC+AGG + chr1_4:47450793-47450812 None:intergenic 30.0%
GAATATCATCCAAGTTAATG+AGG + chr1_4:47450921-47450940 None:intergenic 30.0%
AGAACCTACATTTCAGATTA+TGG + chr1_4:47451135-47451154 None:intergenic 30.0%
! TTCACATGATGATGATAATC+TGG + chr1_4:47451171-47451190 None:intergenic 30.0%
!!! ACACTCGTTACAAAGTTTTT+TGG - chr1_4:47451204-47451223 Msa0166250:intron 30.0%
TATTTCCCATTACAACAAAG+CGG + chr1_4:47451499-47451518 None:intergenic 30.0%
GAATACCACTCTTAAAGATT+TGG - chr1_4:47451607-47451626 Msa0166250:intron 30.0%
! CAAATCCAAATCTTTAAGAG+TGG + chr1_4:47451615-47451634 None:intergenic 30.0%
!! TTTGAACTACTGCTTTTACT+TGG - chr1_4:47451631-47451650 Msa0166250:CDS 30.0%
GGGAGTCTTTATTAAAGTAA+GGG - chr1_4:47451666-47451685 Msa0166250:CDS 30.0%
GGAGTCTTTATTAAAGTAAG+GGG - chr1_4:47451667-47451686 Msa0166250:CDS 30.0%
CTAAATTACTTTGTTGAAGG+AGG + chr1_4:47451780-47451799 None:intergenic 30.0%
TAGTATAAGTTCAGATGGTT+TGG - chr1_4:47452339-47452358 Msa0166250:CDS 30.0%
! TTGTGTGTTTTACCTAAAGT+TGG - chr1_4:47452460-47452479 Msa0166250:CDS 30.0%
CTAAAGTTGGCATATATCAT+CGG - chr1_4:47452473-47452492 Msa0166250:CDS 30.0%
! TTTTGTGAAAAAGGTCAGAT+GGG + chr1_4:47452656-47452675 None:intergenic 30.0%
TAACATGAGATGGATATGAA+TGG - chr1_4:47452712-47452731 Msa0166250:CDS 30.0%
ATTCCTGCTTGAAAAATGTT+AGG - chr1_4:47452745-47452764 Msa0166250:CDS 30.0%
AACCAATCAGCATGTTTAAT+TGG + chr1_4:47452849-47452868 None:intergenic 30.0%
GAAATTCTTATAGGCTTATC+CGG - chr1_4:47453053-47453072 Msa0166250:intron 30.0%
TATATACTTCATCCTCTAGA+GGG + chr1_4:47453203-47453222 None:intergenic 30.0%
TTATATACTTCATCCTCTAG+AGG + chr1_4:47453204-47453223 None:intergenic 30.0%
GAAGTATATAACTATCCTCA+AGG - chr1_4:47453213-47453232 Msa0166250:intron 30.0%
GCTATGATCACACTAATAAT+AGG + chr1_4:47453443-47453462 None:intergenic 30.0%
TAAATATACGAGAGCTTGAA+CGG + chr1_4:47453660-47453679 None:intergenic 30.0%
!!! ATTTTTTTCATGCAGAAGTG+TGG + chr1_4:47453802-47453821 None:intergenic 30.0%
! AACAATCTAGCTATTTCACT+TGG - chr1_4:47453875-47453894 Msa0166250:intron 30.0%
! ACAATCTAGCTATTTCACTT+GGG - chr1_4:47453876-47453895 Msa0166250:intron 30.0%
ACTATTTAATGGTGCACTAA+AGG + chr1_4:47453928-47453947 None:intergenic 30.0%
!! TGCTAGAATATTTTAGACTG+AGG - chr1_4:47453948-47453967 Msa0166250:intron 30.0%
!! GCTAGAATATTTTAGACTGA+GGG - chr1_4:47453949-47453968 Msa0166250:intron 30.0%
AAGATTACAACATGACTAAG+AGG - chr1_4:47454126-47454145 Msa0166250:intron 30.0%
AAGTTACTCAAACTTTATCC+TGG + chr1_4:47454269-47454288 None:intergenic 30.0%
CAAAACGAAACGAAACTCAT+TGG - chr1_4:47445315-47445334 Msa0166250:three_prime_UTR 35.0%
AAACTCATTGGAAAACGAGT+AGG - chr1_4:47445327-47445346 Msa0166250:three_prime_UTR 35.0%
AACTCATTGGAAAACGAGTA+GGG - chr1_4:47445328-47445347 Msa0166250:three_prime_UTR 35.0%
! TAAAGTCAAGTGTTGTAGGT+GGG + chr1_4:47445430-47445449 None:intergenic 35.0%
! ATAAAGTCAAGTGTTGTAGG+TGG + chr1_4:47445431-47445450 None:intergenic 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr1_4:47446318-47446337 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr1_4:47446355-47446374 Msa0166250:CDS 35.0%
ACATCTATGAAGCACAGATA+CGG + chr1_4:47446416-47446435 None:intergenic 35.0%
TGTCATATTTACAATCGGCT+TGG - chr1_4:47446443-47446462 Msa0166250:CDS 35.0%
!! TATTTACAATCGGCTTGGTT+TGG - chr1_4:47446448-47446467 Msa0166250:CDS 35.0%
CCAAAAGGACAAAGTTTCAA+GGG - chr1_4:47446720-47446739 Msa0166250:intron 35.0%
! TCTAAAACCAGCAATTTCAG+TGG + chr1_4:47446962-47446981 None:intergenic 35.0%
!!! GAAATTGCTGGTTTTAGAGT+AGG - chr1_4:47446964-47446983 Msa0166250:intron 35.0%
!!! AATTGCTGGTTTTAGAGTAG+GGG - chr1_4:47446966-47446985 Msa0166250:intron 35.0%
TCAGATGGTTGTGTATATGA+TGG - chr1_4:47447069-47447088 Msa0166250:intron 35.0%
TTGTATGAAGGTGAATTCTC+TGG - chr1_4:47447150-47447169 Msa0166250:intron 35.0%
TGGCGATTCAATCTTAAACA+TGG - chr1_4:47447234-47447253 Msa0166250:intron 35.0%
TTCAATCTTAAACATGGCCT+AGG - chr1_4:47447240-47447259 Msa0166250:intron 35.0%
GAGATATATTTGAAGGCTCT+TGG - chr1_4:47447283-47447302 Msa0166250:intron 35.0%
GGCTAACGGAAATGTATATT+TGG - chr1_4:47447344-47447363 Msa0166250:CDS 35.0%
TTTGAAGGAAGCTGGTTAAA+TGG - chr1_4:47447429-47447448 Msa0166250:CDS 35.0%
TGGTTAAATGGTATGATGCA+TGG - chr1_4:47447441-47447460 Msa0166250:CDS 35.0%
! ACAGCTTCCTTTTGGATAAA+AGG + chr1_4:47447544-47447563 None:intergenic 35.0%
AGATATACTTCTTGTGCAGA+TGG + chr1_4:47447570-47447589 None:intergenic 35.0%
CTCAATGCATTGAGAAAAAG+AGG - chr1_4:47447588-47447607 Msa0166250:intron 35.0%
! TAACACTGCTTCAGTTGATA+TGG - chr1_4:47447653-47447672 Msa0166250:intron 35.0%
! AACACTGCTTCAGTTGATAT+GGG - chr1_4:47447654-47447673 Msa0166250:intron 35.0%
GATATGGGAAATGCTAGATT+TGG - chr1_4:47447669-47447688 Msa0166250:intron 35.0%
CACAGAAAACCTGTTAAATC+TGG - chr1_4:47447725-47447744 Msa0166250:intron 35.0%
GAGATTGATCCAGATTTAAC+AGG + chr1_4:47447737-47447756 None:intergenic 35.0%
GCAAGAATGTTTCTCTTGAA+AGG - chr1_4:47447760-47447779 Msa0166250:intron 35.0%
AGAATGTTTCTCTTGAAAGG+CGG - chr1_4:47447763-47447782 Msa0166250:intron 35.0%
GTAGCTATTGAGAAAGTGAT+TGG - chr1_4:47447798-47447817 Msa0166250:intron 35.0%
TGATTCACAATTTGCCTCAA+CGG - chr1_4:47447824-47447843 Msa0166250:intron 35.0%
! TAACGAAAAGATCCCCATTT+TGG - chr1_4:47447878-47447897 Msa0166250:intron 35.0%
TATATTCACGCTCCAAAATG+GGG + chr1_4:47447893-47447912 None:intergenic 35.0%
CATATATTCACGCTCCAAAA+TGG + chr1_4:47447895-47447914 None:intergenic 35.0%
CCCGGTGAACAAATTATTAA+AGG - chr1_4:47448017-47448036 Msa0166250:intron 35.0%
CAAGATGAATCCATGTTAGA+AGG - chr1_4:47448218-47448237 Msa0166250:intron 35.0%
ATTATGACCTCCTTCTAACA+TGG + chr1_4:47448231-47448250 None:intergenic 35.0%
TCCCTTCTATTCTTTACAGT+TGG + chr1_4:47448355-47448374 None:intergenic 35.0%
AATGCCTCTTAAAGAGATTG+AGG - chr1_4:47448378-47448397 Msa0166250:intron 35.0%
!!! TGGAATATCTTGCTTTTTGG+GGG + chr1_4:47448763-47448782 None:intergenic 35.0%
! ATTCATCCAAAAGCTTGCTT+TGG + chr1_4:47449124-47449143 None:intergenic 35.0%
GTCAATTGAGAACCTTCTTT+AGG + chr1_4:47449150-47449169 None:intergenic 35.0%
! ATCAGTCGGAGGATTTTAAA+TGG - chr1_4:47449178-47449197 Msa0166250:intron 35.0%
AAACTAACCTGAACACCATA+GGG + chr1_4:47449215-47449234 None:intergenic 35.0%
TAAACTAACCTGAACACCAT+AGG + chr1_4:47449216-47449235 None:intergenic 35.0%
!! GAGAAAGTGGATTAGAAAGT+TGG - chr1_4:47449571-47449590 Msa0166250:intron 35.0%
!! AAAGTGGATTAGAAAGTTGG+AGG - chr1_4:47449574-47449593 Msa0166250:intron 35.0%
TGTTTGGAAACCCACTAAAA+AGG + chr1_4:47449809-47449828 None:intergenic 35.0%
!! TTTAGTGGGTTTCCAAACAA+TGG - chr1_4:47449810-47449829 Msa0166250:intron 35.0%
TGGTGAAGAAAGAAAGGTTA+GGG + chr1_4:47449849-47449868 None:intergenic 35.0%
AGAAAGTGGTGAAGAAAGAA+AGG + chr1_4:47449855-47449874 None:intergenic 35.0%
TTGGTTCAAAGGAAAGAAAG+TGG + chr1_4:47449869-47449888 None:intergenic 35.0%
! CACTAGTATGTTTGGTTCAA+AGG + chr1_4:47449880-47449899 None:intergenic 35.0%
! TTCACCTTAAGTTGTCAAGT+AGG + chr1_4:47449988-47450007 None:intergenic 35.0%
CACATCACATCATACATTAG+AGG + chr1_4:47450112-47450131 None:intergenic 35.0%
AATTTCTGCAAAAGGTCACA+AGG + chr1_4:47450302-47450321 None:intergenic 35.0%
CTCTCTCAAATTTCTGCAAA+AGG + chr1_4:47450310-47450329 None:intergenic 35.0%
! CAAAGCATCATTTCCACAAA+TGG + chr1_4:47450367-47450386 None:intergenic 35.0%
! TAGTGTCTTTTTCTTGTCTC+AGG - chr1_4:47450416-47450435 Msa0166250:intron 35.0%
TCAGTGTCTTGATCATGAAA+CGG + chr1_4:47450446-47450465 None:intergenic 35.0%
ACTGAGAAGATCAGAAGTAA+AGG - chr1_4:47450461-47450480 Msa0166250:intron 35.0%
TGATATACAAACTTCCTTGG+AGG - chr1_4:47450536-47450555 Msa0166250:CDS 35.0%
CACCCAGGTAAAATGAAATA+TGG + chr1_4:47450584-47450603 None:intergenic 35.0%
TATTGTCTGCCTCATTAACT+TGG - chr1_4:47450909-47450928 Msa0166250:intron 35.0%
! GTGACCATAATCTGAAATGT+AGG - chr1_4:47451128-47451147 Msa0166250:intron 35.0%
!!! CAAAGTTTTTTGGTTTGCAC+AGG - chr1_4:47451214-47451233 Msa0166250:intron 35.0%
! GATAAACGAGCATTACCTTT+TGG + chr1_4:47451257-47451276 None:intergenic 35.0%
ATATGTTCTGCACAGAATTG+AGG - chr1_4:47451516-47451535 Msa0166250:intron 35.0%
GATTTAAAAGGTTCATCCCT+TGG - chr1_4:47451554-47451573 Msa0166250:intron 35.0%
!! CTCATCGATTTCTATCTTGT+CGG + chr1_4:47451588-47451607 None:intergenic 35.0%
CGGGAGTCTTTATTAAAGTA+AGG - chr1_4:47451665-47451684 Msa0166250:CDS 35.0%
! TTTTATTCCTAGGAACACAG+AGG - chr1_4:47451739-47451758 Msa0166250:CDS 35.0%
TTCTTATATATAGGACCGGA+GGG + chr1_4:47451954-47451973 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG + chr1_4:47451953-47451972 None:intergenic 35.0%
TTTCTTATATATAGGACCGG+AGG - chr1_4:47451953-47451972 Msa0166250:CDS 35.0%
TTCTTATATATAGGACCGGA+GGG - chr1_4:47451954-47451973 Msa0166250:CDS 35.0%
! ATGGACTATAGTCTTCTTCT+AGG - chr1_4:47452277-47452296 Msa0166250:CDS 35.0%
TCTGAACTTATACTAACAGG+AGG + chr1_4:47452334-47452353 None:intergenic 35.0%
CCATCTGAACTTATACTAAC+AGG + chr1_4:47452337-47452356 None:intergenic 35.0%
CCTGTTAGTATAAGTTCAGA+TGG - chr1_4:47452334-47452353 Msa0166250:CDS 35.0%
CGATGATATATGCCAACTTT+AGG + chr1_4:47452475-47452494 None:intergenic 35.0%
TTTAGATGATGAGATCTACG+AGG - chr1_4:47452585-47452604 Msa0166250:CDS 35.0%
TTAGATGATGAGATCTACGA+GGG - chr1_4:47452586-47452605 Msa0166250:CDS 35.0%
! CTTTTGTGAAAAAGGTCAGA+TGG + chr1_4:47452657-47452676 None:intergenic 35.0%
AGGACCAATGTTGTAAAATC+TGG - chr1_4:47452778-47452797 Msa0166250:CDS 35.0%
ATGTTTAATTGGACCAGCAA+AGG + chr1_4:47452838-47452857 None:intergenic 35.0%
GTCCAATTAAACATGCTGAT+TGG - chr1_4:47452844-47452863 Msa0166250:exon 35.0%
! ACAGTGCTGCTAAGTTAAAA+GGG + chr1_4:47452882-47452901 None:intergenic 35.0%
GAGCTCTTGAATTGAGTATT+CGG - chr1_4:47452970-47452989 Msa0166250:intron 35.0%
TCTTGAATTGAGTATTCGGT+TGG - chr1_4:47452974-47452993 Msa0166250:intron 35.0%
CACACTAATAATAGGATAGC+TGG + chr1_4:47453435-47453454 None:intergenic 35.0%
TTATGTTCATCAAATACGGG+CGG - chr1_4:47453485-47453504 Msa0166250:intron 35.0%
AGAGTAGTTTATGTTCTGCT+AGG - chr1_4:47453546-47453565 Msa0166250:intron 35.0%
GAGTAGTTTATGTTCTGCTA+GGG - chr1_4:47453547-47453566 Msa0166250:intron 35.0%
!! ATTTGAGTTTCCTCTTTTCC+TGG + chr1_4:47454053-47454072 None:intergenic 35.0%
GCAATATATCAATGATACCC+AGG + chr1_4:47454106-47454125 None:intergenic 35.0%
TGATTCGTTATCTATATCGG+CGG - chr1_4:47454178-47454197 Msa0166250:intron 35.0%
ACACTTTCTGGATAAAATCC+AGG + chr1_4:47454232-47454251 None:intergenic 35.0%
TTTATCCTGGCACATTTGAT+GGG + chr1_4:47454256-47454275 None:intergenic 35.0%
GGAAAACGAGTAGGGAAATT+TGG - chr1_4:47445336-47445355 Msa0166250:three_prime_UTR 40.0%
TAGTCAAAACCGAACCAAAC+TGG - chr1_4:47446541-47446560 Msa0166250:intron 40.0%
GGGCTTCATAGACTAAAGTA+CGG + chr1_4:47446578-47446597 None:intergenic 40.0%
GCCAAAAGGACAAAGTTTCA+AGG - chr1_4:47446719-47446738 Msa0166250:intron 40.0%
! CCCTTGAAACTTTGTCCTTT+TGG + chr1_4:47446723-47446742 None:intergenic 40.0%
AGTTTCAAGGGTCAATCACT+TGG - chr1_4:47446732-47446751 Msa0166250:intron 40.0%
AGACAAGAATGGTTGCAGAT+AGG + chr1_4:47446766-47446785 None:intergenic 40.0%
CAACAGCTACAAGACAAGAA+TGG + chr1_4:47446777-47446796 None:intergenic 40.0%
TCTTGTAGCTGTTGAGAATC+CGG - chr1_4:47446783-47446802 Msa0166250:intron 40.0%
TCGATCCAAACTACTAACTG+TGG + chr1_4:47446869-47446888 None:intergenic 40.0%
GGTAAGTATGTATGGTCAGA+TGG - chr1_4:47447054-47447073 Msa0166250:intron 40.0%
! GTTGTGTATATGATGGTGAG+TGG - chr1_4:47447076-47447095 Msa0166250:intron 40.0%
! TATATGATGGTGAGTGGAGA+CGG - chr1_4:47447082-47447101 Msa0166250:intron 40.0%
TATGAAGGTGAATTCTCTGG+TGG - chr1_4:47447153-47447172 Msa0166250:intron 40.0%
CAATATATGATCCTGTACCG+TGG + chr1_4:47447185-47447204 None:intergenic 40.0%
CACGGTACAGGATCATATAT+TGG - chr1_4:47447183-47447202 Msa0166250:intron 40.0%
CTTTGTAGGTCAGACTTTCT+GGG + chr1_4:47447209-47447228 None:intergenic 40.0%
ATATACATTTCCGTTAGCCC+AGG + chr1_4:47447343-47447362 None:intergenic 40.0%
AATGGTATGATGCATGGTCT+TGG - chr1_4:47447447-47447466 Msa0166250:CDS 40.0%
TTGGAGCGTGAATATATGCA+AGG - chr1_4:47447897-47447916 Msa0166250:intron 40.0%
TGGAGCGTGAATATATGCAA+GGG - chr1_4:47447898-47447917 Msa0166250:intron 40.0%
!! GCAAGGGGTATTAATAAGTG+AGG - chr1_4:47447914-47447933 Msa0166250:intron 40.0%
!! TTAGTTTGCAGCTCGGAATA+AGG - chr1_4:47448063-47448082 Msa0166250:CDS 40.0%
GATGAATCCATGTTAGAAGG+AGG - chr1_4:47448221-47448240 Msa0166250:intron 40.0%
!!! TCTTGCTTTTTGGGGGAAAA+AGG + chr1_4:47448756-47448775 None:intergenic 40.0%
GTTGCTATGTGATTCCCAAT+AGG + chr1_4:47448794-47448813 None:intergenic 40.0%
ATTGGGAATCACATAGCAAC+CGG - chr1_4:47448794-47448813 Msa0166250:intron 40.0%
GGTTGCCTCATGTCATTAAT+AGG + chr1_4:47448918-47448937 None:intergenic 40.0%
! AAAATGGGCTTCAAATGGCT+AGG - chr1_4:47449037-47449056 Msa0166250:intron 40.0%
TCAAATGGCTAGGTATACTG+TGG - chr1_4:47449047-47449066 Msa0166250:intron 40.0%
CAAATGGCTAGGTATACTGT+GGG - chr1_4:47449048-47449067 Msa0166250:intron 40.0%
TTAAAATCCTCCGACTGATG+AGG + chr1_4:47449177-47449196 None:intergenic 40.0%
ATGGAAAGATTACTGCCCTA+TGG - chr1_4:47449197-47449216 Msa0166250:intron 40.0%
ATCACTACATGCCACTCTTA+TGG - chr1_4:47449328-47449347 Msa0166250:CDS 40.0%
TACATGCCACTCTTATGGAT+TGG - chr1_4:47449333-47449352 Msa0166250:CDS 40.0%
TGTCAACCAATCCATAAGAG+TGG + chr1_4:47449342-47449361 None:intergenic 40.0%
! GGTTGCAAAAAGAAAGTGTG+AGG - chr1_4:47449469-47449488 Msa0166250:intron 40.0%
GTGTGAGGAAAGATAGTGAA+AGG - chr1_4:47449484-47449503 Msa0166250:intron 40.0%
GTATAAGGAAAGAAAGGGAG+TGG - chr1_4:47449514-47449533 Msa0166250:intron 40.0%
!!! CAATAATAGTAGGGGCGTTT+TGG - chr1_4:47449685-47449704 Msa0166250:intron 40.0%
! CGTGGAAAGATGTTTTGTGT+GGG - chr1_4:47449757-47449776 Msa0166250:intron 40.0%
GTGGAAAGAAAGAATGTGGT+GGG + chr1_4:47449784-47449803 None:intergenic 40.0%
! TCTTTCCACCACCTTTTTAG+TGG - chr1_4:47449795-47449814 Msa0166250:intron 40.0%
!! CTTTCCACCACCTTTTTAGT+GGG - chr1_4:47449796-47449815 Msa0166250:intron 40.0%
TTGGAAACCCACTAAAAAGG+TGG + chr1_4:47449806-47449825 None:intergenic 40.0%
GTGGTGAAGAAAGAAAGGTT+AGG + chr1_4:47449850-47449869 None:intergenic 40.0%
AATAGACGAGAGCAAAACAG+AGG + chr1_4:47450243-47450262 None:intergenic 40.0%
GACTACATGATGTCCATTTG+TGG - chr1_4:47450351-47450370 Msa0166250:intron 40.0%
! TCATTGATAACCAAGGACCA+TGG + chr1_4:47450613-47450632 None:intergenic 40.0%
ACACACACACACATATCAAG+AGG - chr1_4:47450851-47450870 Msa0166250:intron 40.0%
AGGTCTTTGCAGACAGAAAT+AGG - chr1_4:47450871-47450890 Msa0166250:intron 40.0%
CACAGGATTATACCTTCAAG+TGG - chr1_4:47451231-47451250 Msa0166250:intron 40.0%
TATACCTTCAAGTGGCCAAA+AGG - chr1_4:47451239-47451258 Msa0166250:intron 40.0%
! ATTACCTTTTGGCCACTTGA+AGG + chr1_4:47451246-47451265 None:intergenic 40.0%
! CAGTTCCGCTTTGTTGTAAT+GGG - chr1_4:47451491-47451510 Msa0166250:intron 40.0%
GATATGTATTGTACTCCCTC+CGG - chr1_4:47451819-47451838 Msa0166250:CDS 40.0%
!!! GTTTTGAAGTTGAGCATTGC+AGG + chr1_4:47452180-47452199 None:intergenic 40.0%
! TGCACAAGAGTACGAGTAAA+AGG + chr1_4:47452213-47452232 None:intergenic 40.0%
! TTTTACTCGTACTCTTGTGC+AGG - chr1_4:47452212-47452231 Msa0166250:CDS 40.0%
TAGATGATGAGATCTACGAG+GGG - chr1_4:47452587-47452606 Msa0166250:CDS 40.0%
!!! GCTCCTAACATTTTTCAAGC+AGG + chr1_4:47452751-47452770 None:intergenic 40.0%
! CAGGCCAGATTTTACAACAT+TGG + chr1_4:47452785-47452804 None:intergenic 40.0%
CAATGTTGTAAAATCTGGCC+TGG - chr1_4:47452783-47452802 Msa0166250:CDS 40.0%
! GACAGTGCTGCTAAGTTAAA+AGG + chr1_4:47452883-47452902 None:intergenic 40.0%
! GATGATGGTAGTGTTGTTGT+CGG - chr1_4:47453261-47453280 Msa0166250:intron 40.0%
! ATGATGGTAGTGTTGTTGTC+GGG - chr1_4:47453262-47453281 Msa0166250:intron 40.0%
AAGAATTACCTTGCAGTACC+AGG + chr1_4:47453354-47453373 None:intergenic 40.0%
TAAACTACTCTCCCAACAAC+TGG + chr1_4:47453537-47453556 None:intergenic 40.0%
TGAACGGCAAAAATCTATGG+AGG + chr1_4:47453644-47453663 None:intergenic 40.0%
GCTTGAACGGCAAAAATCTA+TGG + chr1_4:47453647-47453666 None:intergenic 40.0%
TGCAGACTTCAAATCCAGTT+AGG - chr1_4:47453996-47454015 Msa0166250:intron 40.0%
TTATGACGTCGTACTATACC+TGG - chr1_4:47454085-47454104 Msa0166250:intron 40.0%
TATGACGTCGTACTATACCT+GGG - chr1_4:47454086-47454105 Msa0166250:intron 40.0%
CATTTGATGGGAACACTTTC+TGG + chr1_4:47454244-47454263 None:intergenic 40.0%
CTTTATCCTGGCACATTTGA+TGG + chr1_4:47454257-47454276 None:intergenic 40.0%
CAAAGCATGCATGCACAAAA+GGG + chr1_4:47454336-47454355 None:intergenic 40.0%
ACAAAGCATGCATGCACAAA+AGG + chr1_4:47454337-47454356 None:intergenic 40.0%
! TTGCTTGCTGGCTATAGTCT+AGG + chr1_4:47445380-47445399 None:intergenic 45.0%
TATGGGCGATGAAATTGAGC+TGG - chr1_4:47445876-47445895 Msa0166250:intron 45.0%
!! ATATGTGTCGGTGTCGGATA+CGG + chr1_4:47446312-47446331 None:intergenic 45.0%
ATGAAGCACAGATACGGACA+CGG + chr1_4:47446410-47446429 None:intergenic 45.0%
TCTGTGCTTCATAGATGTCG+TGG - chr1_4:47446418-47446437 Msa0166250:CDS 45.0%
CTATTGCGATCAAAAGCCCA+CGG + chr1_4:47446518-47446537 None:intergenic 45.0%
ACTAAAGTACGGCTGTTCGT+GGG + chr1_4:47446567-47446586 None:intergenic 45.0%
CTTGTAGCTGTTGAGAATCC+GGG - chr1_4:47446784-47446803 Msa0166250:intron 45.0%
CAAACTACTAACTGTGGCCA+CGG + chr1_4:47446863-47446882 None:intergenic 45.0%
ATATTGACAAACGGCGAAGC+TGG - chr1_4:47446931-47446950 Msa0166250:intron 45.0%
GGTCATTCCACTGAAATTGC+TGG - chr1_4:47446952-47446971 Msa0166250:intron 45.0%
CCTAATGGCGAGTCATATTC+CGG - chr1_4:47447000-47447019 Msa0166250:intron 45.0%
TCATATTCCGGATCCCTTCT+CGG - chr1_4:47447012-47447031 Msa0166250:intron 45.0%
TACATACTTACCCTGACCCT+CGG + chr1_4:47447046-47447065 None:intergenic 45.0%
AGGGTCAGGGTAAGTATGTA+TGG - chr1_4:47447046-47447065 Msa0166250:intron 45.0%
! ATATGATGGTGAGTGGAGAC+GGG - chr1_4:47447083-47447102 Msa0166250:intron 45.0%
GGGAAAATACAATGGCCTTC+TGG - chr1_4:47447123-47447142 Msa0166250:intron 45.0%
CCTTCATACAACACACCAGA+AGG + chr1_4:47447141-47447160 None:intergenic 45.0%
CCTTCTGGTGTGTTGTATGA+AGG - chr1_4:47447138-47447157 Msa0166250:intron 45.0%
TTCTCTGGTGGCTATATCCA+CGG - chr1_4:47447165-47447184 Msa0166250:intron 45.0%
CCTTTGTAGGTCAGACTTTC+TGG + chr1_4:47447210-47447229 None:intergenic 45.0%
CCAGAAAGTCTGACCTACAA+AGG - chr1_4:47447207-47447226 Msa0166250:intron 45.0%
TTTGAAGGCTCTTGGATCCA+AGG - chr1_4:47447291-47447310 Msa0166250:intron 45.0%
TTGGATCCAAGGAAATCCTG+AGG - chr1_4:47447302-47447321 Msa0166250:intron 45.0%
TGGATCCAAGGAAATCCTGA+GGG - chr1_4:47447303-47447322 Msa0166250:intron 45.0%
ATGAAAGGTGGGACAATGTC+AGG - chr1_4:47447372-47447391 Msa0166250:CDS 45.0%
GTAAGTGGAGACTCGTTTGA+AGG - chr1_4:47447414-47447433 Msa0166250:CDS 45.0%
! ATGGTCTTGGCGCATATACT+TGG - chr1_4:47447460-47447479 Msa0166250:intron 45.0%
! TGGTCTTGGCGCATATACTT+GGG - chr1_4:47447461-47447480 Msa0166250:intron 45.0%
!! ATGCTAGATTTGGTGAGACC+CGG - chr1_4:47447679-47447698 Msa0166250:intron 45.0%
! AACAGGTTTTCTGTGCCAGA+CGG + chr1_4:47447720-47447739 None:intergenic 45.0%
ATGTTTCTCTTGAAAGGCGG+TGG - chr1_4:47447766-47447785 Msa0166250:intron 45.0%
CTTCGCCGATGGAAATAAAG+AGG - chr1_4:47447854-47447873 Msa0166250:intron 45.0%
GGAGCGTGAATATATGCAAG+GGG - chr1_4:47447899-47447918 Msa0166250:intron 45.0%
GCCAAAGATATCAAAAGGCC+CGG - chr1_4:47447999-47448018 Msa0166250:intron 45.0%
! ACCGGGCCTTTTGATATCTT+TGG + chr1_4:47448003-47448022 None:intergenic 45.0%
GCATCAGATCATAACTCCTG+TGG + chr1_4:47448043-47448062 None:intergenic 45.0%
!! CTGATGCTTAGTTTGCAGCT+CGG - chr1_4:47448056-47448075 Msa0166250:CDS 45.0%
AACTTCTCGTCTCTGTATGG+GGG + chr1_4:47449082-47449101 None:intergenic 45.0%
GAACTTCTCGTCTCTGTATG+GGG + chr1_4:47449083-47449102 None:intergenic 45.0%
CGAACTTCTCGTCTCTGTAT+GGG + chr1_4:47449084-47449103 None:intergenic 45.0%
TCGAACTTCTCGTCTCTGTA+TGG + chr1_4:47449085-47449104 None:intergenic 45.0%
!!! GAAGTTCGAGCATCGGATTT+TGG - chr1_4:47449096-47449115 Msa0166250:intron 45.0%
!!! TTGGTGCCAAAGCAAGCTTT+TGG - chr1_4:47449115-47449134 Msa0166250:intron 45.0%
ATTGACACCTCCTCATCAGT+CGG - chr1_4:47449164-47449183 Msa0166250:intron 45.0%
ATTACTGCCCTATGGTGTTC+AGG - chr1_4:47449205-47449224 Msa0166250:intron 45.0%
!! ATGGATTGGTTGACAGCATC+AGG - chr1_4:47449347-47449366 Msa0166250:CDS 45.0%
GAAAGGGAGTGGAAAGTAAG+AGG - chr1_4:47449525-47449544 Msa0166250:intron 45.0%
! GCGTGGAAAGATGTTTTGTG+TGG - chr1_4:47449756-47449775 Msa0166250:intron 45.0%
GGTGGAAAGAAAGAATGTGG+TGG + chr1_4:47449785-47449804 None:intergenic 45.0%
!! GGTGGTGGAAAGAAAGAATG+TGG + chr1_4:47449788-47449807 None:intergenic 45.0%
GAAACCCACTAAAAAGGTGG+TGG + chr1_4:47449803-47449822 None:intergenic 45.0%
TTGAGAGAACTATCGTCTCC+AGG - chr1_4:47450384-47450403 Msa0166250:intron 45.0%
TGAGAGAACTATCGTCTCCA+GGG - chr1_4:47450385-47450404 Msa0166250:intron 45.0%
!! AAGACACTACCACTTTTCCC+TGG + chr1_4:47450405-47450424 None:intergenic 45.0%
CAGTTGAAAACAAGCCTCCA+AGG + chr1_4:47450553-47450572 None:intergenic 45.0%
!! CTTGGAGGCTTGTTTTCAAC+TGG - chr1_4:47450551-47450570 Msa0166250:CDS 45.0%
! TTACCTGGGTGTTTTCTCCA+TGG - chr1_4:47450593-47450612 Msa0166250:CDS 45.0%
TGTGTGTGTGTAGGTACATC+CGG + chr1_4:47450836-47450855 None:intergenic 45.0%
ATGTGTGTGTGTGTGTGTGT+AGG + chr1_4:47450845-47450864 None:intergenic 45.0%
! GCAGTTCCGCTTTGTTGTAA+TGG - chr1_4:47451490-47451509 Msa0166250:intron 45.0%
AATAAAGACTCCCGCCAAGA+CGG + chr1_4:47451659-47451678 None:intergenic 45.0%
TCTTTCTCCTCTGTGTTCCT+AGG + chr1_4:47451749-47451768 None:intergenic 45.0%
TGAGACTGACAGCAAGTTCT+TGG - chr1_4:47452240-47452259 Msa0166250:CDS 45.0%
CTTGGAGGAACAGCACATAA+TGG - chr1_4:47452258-47452277 Msa0166250:CDS 45.0%
AGATGATGAGATCTACGAGG+GGG - chr1_4:47452588-47452607 Msa0166250:CDS 45.0%
TGTAAAATCTGGCCTGGACT+TGG - chr1_4:47452789-47452808 Msa0166250:CDS 45.0%
! AAAGGACCTGGCTATCCTTT+TGG + chr1_4:47452820-47452839 None:intergenic 45.0%
ATCAACTACAGACCCTCTAG+AGG - chr1_4:47453188-47453207 Msa0166250:intron 45.0%
!! CTATCCTCAAGGTCTTGTTC+TGG - chr1_4:47453224-47453243 Msa0166250:intron 45.0%
TTCTTCTACCTGGTACTGCA+AGG - chr1_4:47453343-47453362 Msa0166250:intron 45.0%
TGGTGCAATACTCCAGTTGT+TGG - chr1_4:47453522-47453541 Msa0166250:intron 45.0%
GGTGCAATACTCCAGTTGTT+GGG - chr1_4:47453523-47453542 Msa0166250:intron 45.0%
CAACTAGTGTTAGGCGTTAG+AGG + chr1_4:47453701-47453720 None:intergenic 45.0%
! GTAGGAGTGCAACTAGTGTT+AGG + chr1_4:47453710-47453729 None:intergenic 45.0%
! CAGAAGTGTGGTGCAATCAT+TGG + chr1_4:47453790-47453809 None:intergenic 45.0%
AGAGCAGATACCAGGAAAAG+AGG - chr1_4:47454040-47454059 Msa0166250:intron 45.0%
GGAAACTCAAATGTTCCACG+AGG - chr1_4:47454061-47454080 Msa0166250:intron 45.0%
TTCGTTATCTATATCGGCGG+TGG - chr1_4:47454181-47454200 Msa0166250:intron 45.0%
AAGCGACGAGAGTAGAATGT+AGG + chr1_4:47454209-47454228 None:intergenic 45.0%
!!! GTTTTATTTTATATATATAA+GGG + chr1_4:47449635-47449654 None:intergenic 5.0%
!!! TGTTTTATTTTATATATATA+AGG + chr1_4:47449636-47449655 None:intergenic 5.0%
! CTCAACGCTCTTTTGCTTGC+TGG + chr1_4:47445392-47445411 None:intergenic 50.0%
TCGGTGTGTCAGTGTTTGTG+TGG - chr1_4:47446374-47446393 Msa0166250:CDS 50.0%
ACAGATACGGACACGGACAT+CGG + chr1_4:47446403-47446422 None:intergenic 50.0%
GACTAAAGTACGGCTGTTCG+TGG + chr1_4:47446568-47446587 None:intergenic 50.0%
! ATTATGCATGTCTGGCTCCG+TGG - chr1_4:47446843-47446862 Msa0166250:intron 50.0%
CGTGGCCACAGTTAGTAGTT+TGG - chr1_4:47446861-47446880 Msa0166250:intron 50.0%
GGGGAACTCTCTCTTCCTAA+TGG - chr1_4:47446985-47447004 Msa0166250:intron 50.0%
CCGGAATATGACTCGCCATT+AGG + chr1_4:47447003-47447022 None:intergenic 50.0%
ACATACTTACCCTGACCCTC+GGG + chr1_4:47447045-47447064 None:intergenic 50.0%
! TATGATGGTGAGTGGAGACG+GGG - chr1_4:47447084-47447103 Msa0166250:intron 50.0%
! GGGGGATGAGGAATGGATTT+GGG - chr1_4:47447103-47447122 Msa0166250:intron 50.0%
GTCTGACCTACAAAGGTCGA+TGG - chr1_4:47447214-47447233 Msa0166250:intron 50.0%
GAATCGCCATCGACCTTTGT+AGG + chr1_4:47447223-47447242 None:intergenic 50.0%
GGATCCAAGGAAATCCTGAG+GGG - chr1_4:47447304-47447323 Msa0166250:intron 50.0%
TTAGCCCAGGTATACTTGCC+TGG + chr1_4:47447330-47447349 None:intergenic 50.0%
GGCAAGTATACCTGGGCTAA+CGG - chr1_4:47447330-47447349 Msa0166250:CDS 50.0%
AGGCAAAGGAACCCTTACCT+GGG - chr1_4:47447392-47447411 Msa0166250:CDS 50.0%
GTCTCCACTTACCCAGGTAA+GGG + chr1_4:47447406-47447425 None:intergenic 50.0%
AGTCTCCACTTACCCAGGTA+AGG + chr1_4:47447407-47447426 None:intergenic 50.0%
AAACGAGTCTCCACTTACCC+AGG + chr1_4:47447412-47447431 None:intergenic 50.0%
GAGACTCGTTTGAAGGAAGC+TGG - chr1_4:47447421-47447440 Msa0166250:CDS 50.0%
GGTCTTGGCGCATATACTTG+GGG - chr1_4:47447462-47447481 Msa0166250:intron 50.0%
GCGCATATACTTGGGGTGAT+GGG - chr1_4:47447469-47447488 Msa0166250:intron 50.0%
CGCATATACTTGGGGTGATG+GGG - chr1_4:47447470-47447489 Msa0166250:intron 50.0%
! GCATATACTTGGGGTGATGG+GGG - chr1_4:47447471-47447490 Msa0166250:intron 50.0%
!! CATATACTTGGGGTGATGGG+GGG - chr1_4:47447472-47447491 Msa0166250:intron 50.0%
GCTATGTTGGGACATGGACA+CGG - chr1_4:47447496-47447515 Msa0166250:intron 50.0%
CTATGTTGGGACATGGACAC+GGG - chr1_4:47447497-47447516 Msa0166250:intron 50.0%
TATGTTGGGACATGGACACG+GGG - chr1_4:47447498-47447517 Msa0166250:intron 50.0%
TGGACACGGGGTCTTAAAGA+TGG - chr1_4:47447510-47447529 Msa0166250:intron 50.0%
CGGGGTCTTAAAGATGGCAA+AGG - chr1_4:47447516-47447535 Msa0166250:intron 50.0%
! GATGGCAGACAGCTTCCTTT+TGG + chr1_4:47447552-47447571 None:intergenic 50.0%
TGAAAGGCGGTGGAGTTTAG+AGG - chr1_4:47447776-47447795 Msa0166250:intron 50.0%
GCTTAAGGCAACGCATCTTC+CGG + chr1_4:47448816-47448835 None:intergenic 50.0%
GAGACGAGAAGTTCGAGCAT+CGG - chr1_4:47449089-47449108 Msa0166250:intron 50.0%
AAATCCTCCGACTGATGAGG+AGG + chr1_4:47449174-47449193 None:intergenic 50.0%
!! GCCTCATTCATCGACTCAGT+AGG - chr1_4:47449273-47449292 Msa0166250:CDS 50.0%
GCCTACTGAGTCGATGAATG+AGG + chr1_4:47449277-47449296 None:intergenic 50.0%
CAACAAGTGCAGAAAGGGTG+AGG + chr1_4:47449736-47449755 None:intergenic 50.0%
CTCACCCTTTCTGCACTTGT+TGG - chr1_4:47449734-47449753 Msa0166250:intron 50.0%
CACGCCAACAAGTGCAGAAA+GGG + chr1_4:47449741-47449760 None:intergenic 50.0%
CTATCGTCTCCAGGGAAAAG+TGG - chr1_4:47450393-47450412 Msa0166250:intron 50.0%
! GGTGTTTTCTCCATGGTCCT+TGG - chr1_4:47450600-47450619 Msa0166250:CDS 50.0%
CTTGTCGGAAGAACGTCCAA+GGG + chr1_4:47451573-47451592 None:intergenic 50.0%
TCTTGTCGGAAGAACGTCCA+AGG + chr1_4:47451574-47451593 None:intergenic 50.0%
! GCTTTTACTTGGAGCCGTCT+TGG - chr1_4:47451642-47451661 Msa0166250:CDS 50.0%
TTTACTTGGAGCCGTCTTGG+CGG - chr1_4:47451645-47451664 Msa0166250:CDS 50.0%
GACTGACAGCAAGTTCTTGG+AGG - chr1_4:47452243-47452262 Msa0166250:CDS 50.0%
! TGGTTTGGCAATGCTTGCAG+AGG - chr1_4:47452354-47452373 Msa0166250:CDS 50.0%
TTGGCAATGCTTGCAGAGGA+AGG - chr1_4:47452358-47452377 Msa0166250:CDS 50.0%
AAATCTGGCCTGGACTTGGA+TGG - chr1_4:47452793-47452812 Msa0166250:CDS 50.0%
! CTTTTGGACCATCCAAGTCC+AGG + chr1_4:47452804-47452823 None:intergenic 50.0%
CTGGACTTGGATGGTCCAAA+AGG - chr1_4:47452802-47452821 Msa0166250:CDS 50.0%
GATGGTCCAAAAGGATAGCC+AGG - chr1_4:47452811-47452830 Msa0166250:CDS 50.0%
AATTGGACCAGCAAAGGACC+TGG + chr1_4:47452832-47452851 None:intergenic 50.0%
!! AAGGTCTTGTTCTGGTCCCT+CGG - chr1_4:47453232-47453251 Msa0166250:intron 50.0%
GTTGTCGGGTCACACATTAG+AGG - chr1_4:47453276-47453295 Msa0166250:intron 50.0%
GAGGTGGATCTTCTTCTACC+TGG - chr1_4:47453333-47453352 Msa0166250:intron 50.0%
GTGTTAGGCGTTAGAGGATG+TGG + chr1_4:47453695-47453714 None:intergenic 50.0%
CTGGCATGTTCACACCTAAC+TGG + chr1_4:47454013-47454032 None:intergenic 50.0%
TAGGTGTGAACATGCCAGCA+AGG - chr1_4:47454015-47454034 Msa0166250:intron 50.0%
AGGTGTGAACATGCCAGCAA+GGG - chr1_4:47454016-47454035 Msa0166250:intron 50.0%
ATTCTACTCTCGTCGCTTCC+TGG - chr1_4:47454211-47454230 Msa0166250:intron 50.0%
GTGTTCCCATCAAATGTGCC+AGG - chr1_4:47454248-47454267 Msa0166250:five_prime_UTR 50.0%
! AAAAGCCCACGGCTTGGGTT+GGG + chr1_4:47446507-47446526 None:intergenic 55.0%
CGATCAAAAGCCCACGGCTT+GGG + chr1_4:47446512-47446531 None:intergenic 55.0%
GTTCGTGGGCCAGTTTGGTT+CGG + chr1_4:47446553-47446572 None:intergenic 55.0%
AACGTTGCCGAGAAGGGATC+CGG + chr1_4:47447022-47447041 None:intergenic 55.0%
! ATGATGGTGAGTGGAGACGG+GGG - chr1_4:47447085-47447104 Msa0166250:intron 55.0%
! CGGGGGATGAGGAATGGATT+TGG - chr1_4:47447102-47447121 Msa0166250:intron 55.0%
GGTGGCTATATCCACGGTAC+AGG - chr1_4:47447171-47447190 Msa0166250:intron 55.0%
GGTGGGACAATGTCAGGCAA+AGG - chr1_4:47447378-47447397 Msa0166250:CDS 55.0%
CAGGCAAAGGAACCCTTACC+TGG - chr1_4:47447391-47447410 Msa0166250:CDS 55.0%
GGAACCCTTACCTGGGTAAG+TGG - chr1_4:47447399-47447418 Msa0166250:CDS 55.0%
GGCGCATATACTTGGGGTGA+TGG - chr1_4:47447468-47447487 Msa0166250:intron 55.0%
!! GTGATGGGGGGTGCTATGTT+GGG - chr1_4:47447484-47447503 Msa0166250:intron 55.0%
TTTGGTGAGACCCGGAGAAC+AGG - chr1_4:47447687-47447706 Msa0166250:intron 55.0%
ACGGAACACCACCTGTTCTC+CGG + chr1_4:47447701-47447720 None:intergenic 55.0%
AGAACAGGTGGTGTTCCGTC+TGG - chr1_4:47447702-47447721 Msa0166250:intron 55.0%
GGCGAAGACTGAATCCGTTG+AGG + chr1_4:47447841-47447860 None:intergenic 55.0%
ACGGATTCAGTCTTCGCCGA+TGG - chr1_4:47447843-47447862 Msa0166250:intron 55.0%
CCACGCCAACAAGTGCAGAA+AGG + chr1_4:47449742-47449761 None:intergenic 55.0%
! CCTTTCTGCACTTGTTGGCG+TGG - chr1_4:47449739-47449758 Msa0166250:intron 55.0%
GGACCATGGAGAAAACACCC+AGG + chr1_4:47450599-47450618 None:intergenic 55.0%
TTACTTGGAGCCGTCTTGGC+GGG - chr1_4:47451646-47451665 Msa0166250:CDS 55.0%
AGGATAGCCAGGTCCTTTGC+TGG - chr1_4:47452822-47452841 Msa0166250:CDS 55.0%
GGGACCAGAACAAGACCTTG+AGG + chr1_4:47453231-47453250 None:intergenic 55.0%
!! AGGTCTTGTTCTGGTCCCTC+GGG - chr1_4:47453233-47453252 Msa0166250:intron 55.0%
TACCATCATCTGCTCCCCGA+GGG + chr1_4:47453251-47453270 None:intergenic 55.0%
CAGCAGCTGAAGCTCGCAAT+CGG + chr1_4:47453305-47453324 None:intergenic 55.0%
! CAAATACGGGCGGCTGTTTC+TGG - chr1_4:47453495-47453514 Msa0166250:intron 55.0%
GTACGACGTCATAAGCCTCG+TGG + chr1_4:47454079-47454098 None:intergenic 55.0%
ATCCAACCCAACCCAAGCCG+TGG - chr1_4:47446498-47446517 Msa0166250:intron 60.0%
TCCAACCCAACCCAAGCCGT+GGG - chr1_4:47446499-47446518 Msa0166250:intron 60.0%
! CAAAAGCCCACGGCTTGGGT+TGG + chr1_4:47446508-47446527 None:intergenic 60.0%
GCGATCAAAAGCCCACGGCT+TGG + chr1_4:47446513-47446532 None:intergenic 60.0%
CTCGGGAACGTTGCCGAGAA+GGG + chr1_4:47447028-47447047 None:intergenic 60.0%
CTTCTCGGCAACGTTCCCGA+GGG - chr1_4:47447027-47447046 Msa0166250:intron 60.0%
TGGAGACGGGGGATGAGGAA+TGG - chr1_4:47447096-47447115 Msa0166250:intron 60.0%
CTGGCCCCTCAGGATTTCCT+TGG + chr1_4:47447311-47447330 None:intergenic 60.0%
CAAGGAAATCCTGAGGGGCC+AGG - chr1_4:47447309-47447328 Msa0166250:intron 60.0%
GTATACTTGCCTGGCCCCTC+AGG + chr1_4:47447321-47447340 None:intergenic 60.0%
AGGGGCCAGGCAAGTATACC+TGG - chr1_4:47447322-47447341 Msa0166250:CDS 60.0%
GGGGCCAGGCAAGTATACCT+GGG - chr1_4:47447323-47447342 Msa0166250:CDS 60.0%
!! GGTGATGGGGGGTGCTATGT+TGG - chr1_4:47447483-47447502 Msa0166250:intron 60.0%
!! GGGGGTGCTATGTTGGGACA+TGG - chr1_4:47447490-47447509 Msa0166250:intron 60.0%
CGGAACACCACCTGTTCTCC+GGG + chr1_4:47447700-47447719 None:intergenic 60.0%
GACACCTCCTCATCAGTCGG+AGG - chr1_4:47449167-47449186 Msa0166250:intron 60.0%
AACAGGAGGACGCAGCTGCT+GGG + chr1_4:47452320-47452339 None:intergenic 60.0%
TAACAGGAGGACGCAGCTGC+TGG + chr1_4:47452321-47452340 None:intergenic 60.0%
!! GGTCTTGTTCTGGTCCCTCG+GGG - chr1_4:47453234-47453253 Msa0166250:intron 60.0%
CTACCATCATCTGCTCCCCG+AGG + chr1_4:47453252-47453271 None:intergenic 60.0%
CGATTGCGAGCTTCAGCTGC+TGG - chr1_4:47453303-47453322 Msa0166250:intron 60.0%
! AGCTTCAGCTGCTGGTGACG+AGG - chr1_4:47453311-47453330 Msa0166250:intron 60.0%
! TTCAGCTGCTGGTGACGAGG+AGG - chr1_4:47453314-47453333 Msa0166250:intron 60.0%
GGTATCTGCTCTGCCCTTGC+TGG + chr1_4:47454032-47454051 None:intergenic 60.0%
GCAAGGGCAGAGCAGATACC+AGG - chr1_4:47454032-47454051 Msa0166250:intron 60.0%
CGGCTGTTCGTGGGCCAGTT+TGG + chr1_4:47446558-47446577 None:intergenic 65.0%
CCTCGGGAACGTTGCCGAGA+AGG + chr1_4:47447029-47447048 None:intergenic 65.0%
CCTTCTCGGCAACGTTCCCG+AGG - chr1_4:47447026-47447045 Msa0166250:intron 65.0%
GGCAACGTTCCCGAGGGTCA+GGG - chr1_4:47447033-47447052 Msa0166250:intron 65.0%
GTGAGTGGAGACGGGGGATG+AGG - chr1_4:47447091-47447110 Msa0166250:intron 65.0%
GGTGAGACCCGGAGAACAGG+TGG - chr1_4:47447690-47447709 Msa0166250:intron 65.0%
ACAGGAGGACGCAGCTGCTG+GGG + chr1_4:47452319-47452338 None:intergenic 65.0%
GTCCCTCGGGGAGCAGATGA+TGG - chr1_4:47453246-47453265 Msa0166250:intron 65.0%
! AGCTGCTGGTGACGAGGAGG+TGG - chr1_4:47453317-47453336 Msa0166250:intron 65.0%
!! GGGCGGCTGTTTCTGGCATC+TGG - chr1_4:47453502-47453521 Msa0166250:intron 65.0%
!! GCCCACGGCTTGGGTTGGGT+TGG + chr1_4:47446503-47446522 None:intergenic 70.0%
CGGCAACGTTCCCGAGGGTC+AGG - chr1_4:47447032-47447051 Msa0166250:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 47445236 47454465 47445236 ID=Msa0166250;Name=Msa0166250
chr1_4 mRNA 47445236 47454465 47445236 ID=Msa0166250-mRNA-1;Parent=Msa0166250;Name=Msa0166250-mRNA-1;_AED=0.06;_eAED=0.06;_QI=375|1|1|1|0.87|0.77|9|191|817
chr1_4 exon 47445236 47445700 47445236 ID=Msa0166250-mRNA-1:exon:13710;Parent=Msa0166250-mRNA-1
chr1_4 exon 47446337 47446502 47446337 ID=Msa0166250-mRNA-1:exon:13709;Parent=Msa0166250-mRNA-1
chr1_4 exon 47447322 47447467 47447322 ID=Msa0166250-mRNA-1:exon:13708;Parent=Msa0166250-mRNA-1
chr1_4 exon 47448020 47448207 47448020 ID=Msa0166250-mRNA-1:exon:13707;Parent=Msa0166250-mRNA-1
chr1_4 exon 47448441 47448551 47448441 ID=Msa0166250-mRNA-1:exon:13706;Parent=Msa0166250-mRNA-1
chr1_4 exon 47449219 47449384 47449219 ID=Msa0166250-mRNA-1:exon:13705;Parent=Msa0166250-mRNA-1
chr1_4 exon 47450475 47450642 47450475 ID=Msa0166250-mRNA-1:exon:13704;Parent=Msa0166250-mRNA-1
chr1_4 exon 47451617 47452981 47451617 ID=Msa0166250-mRNA-1:exon:13703;Parent=Msa0166250-mRNA-1
chr1_4 exon 47454221 47454465 47454221 ID=Msa0166250-mRNA-1:exon:13702;Parent=Msa0166250-mRNA-1
chr1_4 five_prime_UTR 47454221 47454465 47454221 ID=Msa0166250-mRNA-1:five_prime_utr;Parent=Msa0166250-mRNA-1
chr1_4 five_prime_UTR 47452852 47452981 47452852 ID=Msa0166250-mRNA-1:five_prime_utr;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47451617 47452851 47451617 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47450475 47450642 47450475 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47449219 47449384 47449219 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47448441 47448551 47448441 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47448020 47448207 47448020 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47447322 47447467 47447322 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47446337 47446502 47446337 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 CDS 47445427 47445700 47445427 ID=Msa0166250-mRNA-1:cds;Parent=Msa0166250-mRNA-1
chr1_4 three_prime_UTR 47445236 47445426 47445236 ID=Msa0166250-mRNA-1:three_prime_utr;Parent=Msa0166250-mRNA-1
Gene Sequence

>Msa0166250

ATGTCTGGCTCCGTGGCCACAGTTAGTAGTTTGGATCGAACACAATCTCTTGCTATCTTTTCTAACATAGACCCTATATCTATATTGACAAACGGCGAAGCTGGTCATTCCACTGAAATTGCTGGTTTTAGAGTAGGGGAACTCTCTCTTCCTAATGGCGAGTCATATTCCGGATCCCTTCTCGGCAACGTTCCCGAGGGTCAGGGTAAGTATGTATGGTCAGATGGTTGTGTATATGATGGTGAGTGGAGACGGGGGATGAGGAATGGATTTGGGAAAATACAATGGCCTTCTGGTGTGTTGTATGAAGGTGAATTCTCTGGTGGCTATATCCACGGTACAGGATCATATATTGGCCCAGAAAGTCTGACCTACAAAGGTCGATGGCGATTCAATCTTAAACATGGCCTAGGTTATCAAGTTTATCCAAATGGAGATATATTTGAAGGCTCTTGGATCCAAGGAAATCCTGAGGGGCCAGGCAAGTATACCTGGGCTAACGGAAATGTATATTTGGGAAATATGAAAGGTGGGACAATGTCAGGCAAAGGAACCCTTACCTGGGTAAGTGGAGACTCGTTTGAAGGAAGCTGGTTAAATGGTATGATGCATGGTCTTGGCGCATATACTTGGGGTGATGGGGGGTGCTATGTTGGGACATGGACACGGGGTCTTAAAGATGGCAAAGGAACCTTTTATCCAAAAGGAAGCTGTCTGCCATCTGCACAAGAAGTATATCTCAATGCATTGAGAAAAAGAGGGCTATTACCAGATTTGAGAAAACAGAATCAGGTGCATATTCATAACACTGCTTCAGTTGATATGGGAAATGCTAGATTTGGTGAGACCCGGAGAACAGGTGGTGTTCCGTCTGGCACAGAAAACCTGTTAAATCTGGATCAATCTCGCAGCAAGAATGTTTCTCTTGAAAGGCGGTGGAGTTTAGAGGTAGCTATTGAGAAAGTGATTGGTCATGATTCACAATTTGCCTCAACGGATTCAGTCTTCGCCGATGGAAATAAAGAGGTTAACGAAAAGATCCCCATTTTGGAGCGTGAATATATGCAAGGGGTATTAATAAGTGAGGTAGTCTTAAATAATAGTTTTGCATCACTTACTAGAAGAGCAAAGCAGCTTAAAAAAAAAATTGCCAAAGATATCAAAAGGCCCGGTGAACAAATTATTAAAGGCCACAGGAGTTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTATACTGTGGGAAAGATTACCCCCATACAGAGACGAGAAGTTCGAGCATCGGATTTTGGTGCCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAGTCGGAGGATTTTAAATGGAAAGATTACTGCCCTATGGTGTTCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCAGACTACATGATGTCCATTTGTGGAAATGATGCTTTGAGAGAACTATCGTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCTTGTCTCAGGATGACCGTTTCATGATCAAGACACTGAGAAGATCAGAAGTAAAGGTTCTTCTAAGAATGCTTCCAGATTATCATCATCATGTGAAGTCATATGAGAATACACTCGTTACAAAGTTTTTTGGTTTGCACAGGATTATACCTTCAAGTGGCCAAAAGTTCCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTGAGGATCCATAGAAGATTTGATTTAAAAGGTTCATCCCTTGGACGTTCTTCCGACAAGATAGAAATCGATGAGAATACCACTCTTAAAGATTTGGATTTGAACTACTGCTTTTACTTGGAGCCGTCTTGGCGGGAGTCTTTATTAAAGCAGATTGAGACTGACAGCAAGTTCTTGGAGGAACAGCACATAATGGACTATAGTCTTCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCGTCCTCCTGTTAGTATAAGTTCAGATGGTTTGGCAATGCTTGCAGAGGAAGACCCTCTAGAGGATGAAGTATATAACTATCCTCAAGGTCTTGTTCTGGTCCCTCGGGGAGCAGATGATGGTAGTGTTGTTGTCGGGTCACACATTAGAGGTAGCCGATTGCGAGCTTCAGCTGCTGGTGACGAGGAGGTGGATCTTCTTCTACCTGGTACTGCAAGACTTCAAATCCAGTTAGGTGTGAACATGCCAGCAAGGGCAGAGCAGATACCAGGAAAAGAGGAAACTCAAATGTTCCACGAGGCTTATGACGTCGTACTATACCTGGGTATCATTGATATATTGCAAGATTACAACATGACTAAGAGGATTGAACATGCGTATAAATCACTTCAGTTTGATTCGTTATCTATATCGGCGGTGGATCCTACATTCTACTCTCGTCGCTTCCTGGATTTTATCCAGAAAGTGTTCCCATCAAATGTGCCAGGATAA
Protein sequence

>Msa0166250

MSGSVATVSSLDRTQSLAIFSNIDPISILTNGEAGHSTEIAGFRVGELSLPNGESYSGSLLGNVPEGQGKYVWSDGCVYDGEWRRGMRNGFGKIQWPSGVLYEGEFSGGYIHGTGSYIGPESLTYKGRWRFNLKHGLGYQVYPNGDIFEGSWIQGNPEGPGKYTWANGNVYLGNMKGGTMSGKGTLTWVSGDSFEGSWLNGMMHGLGAYTWGDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEVYLNALRKRGLLPDLRKQNQVHIHNTASVDMGNARFGETRRTGGVPSGTENLLNLDQSRSKNVSLERRWSLEVAIEKVIGHDSQFASTDSVFADGNKEVNEKIPILEREYMQGVLISEVVLNNSFASLTRRAKQLKKKIAKDIKRPGEQIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGAKASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLVTKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIETDSKFLEEQHIMDYSLLLGVHYRAPQQLRPPVSISSDGLAMLAEEDPLEDEVYNYPQGLVLVPRGADDGSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEETQMFHEAYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSRRFLDFIQKVFPSNVPG*