Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073040 | XP_013468112.1 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073040 | sp|Q8L850|PI5K9_ARATH | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073040 | A0A072VJC1 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025490 | Msa0073040 | 0.934459 | 3.908389e-96 | -8.615850e-47 |
| Msa0073040 | Msa0121240 | 0.989428 | 4.453562e-178 | -8.615850e-47 |
| Msa0073040 | Msa0166250 | 0.987524 | 1.435764e-170 | -8.615850e-47 |
| Msa0073040 | Msa0480550 | 0.802667 | 5.031365e-49 | -8.615850e-47 |
| Msa0073040 | Msa0497860 | 0.809731 | 1.637221e-50 | -8.615850e-47 |
| Msa0073040 | Msa0669350 | 0.802680 | 5.001882e-49 | -8.615850e-47 |
| Msa0073040 | Msa0744550 | 0.801871 | 7.337416e-49 | -8.615850e-47 |
| Msa0073040 | Msa0744560 | 0.804344 | 2.260157e-49 | -8.615850e-47 |
| Msa0073040 | Msa1001120 | 0.805599 | 1.235125e-49 | -8.615850e-47 |
| Msa0073040 | Msa1030210 | 0.821301 | 4.342948e-53 | -8.615850e-47 |
| Msa0073040 | Msa1069250 | 0.801022 | 1.095267e-48 | -8.615850e-47 |
| Msa0073040 | Msa1120580 | 0.803109 | 4.077194e-49 | -8.615850e-47 |
| Msa0073040 | Msa1157110 | 0.800052 | 1.726650e-48 | -8.615850e-47 |
| Msa0073040 | Msa1202110 | 0.803566 | 3.279985e-49 | -8.615850e-47 |
| Msa0073040 | Msa1459920 | 0.810912 | 9.105405e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073040 | MtrunA17_Chr1g0180261 | 98.417 | 821 | 9 | 1 | 1 | 817 | 1 | 821 | 0.0 | 1665 |
| Msa0073040 | MtrunA17_Chr8g0380791 | 51.535 | 782 | 343 | 10 | 44 | 812 | 6 | 764 | 0.0 | 772 |
| Msa0073040 | MtrunA17_Chr1g0171491 | 41.577 | 837 | 401 | 19 | 3 | 811 | 14 | 790 | 0.0 | 596 |
| Msa0073040 | MtrunA17_Chr8g0353121 | 42.401 | 783 | 349 | 16 | 47 | 811 | 49 | 747 | 0.0 | 581 |
| Msa0073040 | MtrunA17_Chr7g0256301 | 43.278 | 781 | 368 | 17 | 47 | 811 | 67 | 788 | 0.0 | 580 |
| Msa0073040 | MtrunA17_Chr7g0256301 | 33.588 | 131 | 64 | 1 | 45 | 175 | 134 | 241 | 3.84e-15 | 79.7 |
| Msa0073040 | MtrunA17_Chr5g0424301 | 42.261 | 743 | 319 | 16 | 97 | 811 | 69 | 729 | 2.07e-180 | 536 |
| Msa0073040 | MtrunA17_Chr5g0424301 | 48.066 | 181 | 85 | 1 | 42 | 213 | 60 | 240 | 9.02e-52 | 193 |
| Msa0073040 | MtrunA17_Chr3g0115111 | 40.048 | 834 | 350 | 17 | 8 | 814 | 21 | 731 | 2.61e-179 | 533 |
| Msa0073040 | MtrunA17_Chr3g0131001 | 41.421 | 746 | 307 | 16 | 97 | 811 | 55 | 701 | 2.26e-168 | 504 |
| Msa0073040 | MtrunA17_Chr3g0131001 | 49.714 | 175 | 88 | 0 | 47 | 221 | 51 | 225 | 5.58e-47 | 179 |
| Msa0073040 | MtrunA17_Chr8g0385201 | 52.632 | 437 | 146 | 7 | 386 | 811 | 277 | 663 | 1.45e-144 | 441 |
| Msa0073040 | MtrunA17_Chr8g0385201 | 47.337 | 169 | 88 | 1 | 44 | 211 | 23 | 191 | 1.04e-46 | 177 |
| Msa0073040 | MtrunA17_Chr8g0385201 | 35.036 | 137 | 88 | 1 | 97 | 232 | 30 | 166 | 1.81e-16 | 84.0 |
| Msa0073040 | MtrunA17_Chr3g0082501 | 50.913 | 438 | 169 | 9 | 385 | 811 | 355 | 757 | 1.31e-131 | 410 |
| Msa0073040 | MtrunA17_Chr3g0082501 | 48.691 | 191 | 98 | 0 | 47 | 237 | 60 | 250 | 3.43e-57 | 209 |
| Msa0073040 | MtrunA17_Chr3g0082501 | 36.000 | 100 | 63 | 1 | 46 | 145 | 151 | 249 | 4.96e-11 | 66.6 |
| Msa0073040 | MtrunA17_Chr8g0377191 | 38.043 | 184 | 114 | 0 | 47 | 230 | 8 | 191 | 2.82e-38 | 141 |
| Msa0073040 | MtrunA17_Chr8g0377191 | 31.967 | 122 | 83 | 0 | 52 | 173 | 82 | 203 | 2.89e-16 | 78.2 |
| Msa0073040 | MtrunA17_Chr8g0377191 | 29.907 | 107 | 75 | 0 | 46 | 152 | 99 | 205 | 1.10e-12 | 67.8 |
| Msa0073040 | MtrunA17_Chr8g0382971 | 32.317 | 328 | 197 | 5 | 37 | 364 | 11 | 313 | 2.69e-36 | 140 |
| Msa0073040 | MtrunA17_Chr8g0382971 | 33.333 | 195 | 128 | 1 | 28 | 220 | 46 | 240 | 5.12e-27 | 113 |
| Msa0073040 | MtrunA17_Chr8g0377671 | 40.323 | 186 | 111 | 0 | 45 | 230 | 14 | 199 | 4.09e-36 | 138 |
| Msa0073040 | MtrunA17_Chr8g0377671 | 35.802 | 162 | 104 | 0 | 46 | 207 | 107 | 268 | 5.51e-24 | 102 |
| Msa0073040 | MtrunA17_Chr4g0059911 | 40.000 | 180 | 107 | 1 | 53 | 231 | 11 | 190 | 6.40e-32 | 128 |
| Msa0073040 | MtrunA17_Chr4g0059911 | 31.739 | 230 | 148 | 2 | 48 | 272 | 53 | 278 | 9.18e-28 | 116 |
| Msa0073040 | MtrunA17_Chr4g0059911 | 30.909 | 165 | 91 | 1 | 46 | 187 | 74 | 238 | 2.21e-15 | 79.0 |
| Msa0073040 | MtrunA17_Chr2g0316611 | 34.649 | 228 | 144 | 3 | 46 | 272 | 100 | 323 | 1.18e-29 | 121 |
| Msa0073040 | MtrunA17_Chr2g0316611 | 34.783 | 230 | 145 | 3 | 44 | 272 | 29 | 254 | 2.40e-29 | 120 |
| Msa0073040 | MtrunA17_Chr2g0316611 | 36.735 | 196 | 123 | 1 | 46 | 240 | 169 | 364 | 1.06e-28 | 119 |
| Msa0073040 | MtrunA17_Chr2g0316611 | 35.385 | 130 | 84 | 0 | 46 | 175 | 238 | 367 | 3.35e-19 | 90.5 |
| Msa0073040 | MtrunA17_Chr2g0316631 | 33.333 | 237 | 152 | 4 | 44 | 279 | 29 | 260 | 6.12e-28 | 115 |
| Msa0073040 | MtrunA17_Chr2g0316631 | 34.872 | 195 | 126 | 1 | 46 | 239 | 100 | 294 | 1.25e-26 | 111 |
| Msa0073040 | MtrunA17_Chr6g0467061 | 32.340 | 235 | 146 | 2 | 46 | 279 | 83 | 305 | 1.34e-27 | 114 |
| Msa0073040 | MtrunA17_Chr6g0467061 | 35.533 | 197 | 98 | 3 | 50 | 246 | 18 | 185 | 9.41e-26 | 109 |
| Msa0073040 | MtrunA17_Chr6g0467061 | 34.239 | 184 | 121 | 0 | 46 | 229 | 152 | 335 | 1.64e-22 | 99.8 |
| Msa0073040 | MtrunA17_Chr8g0377221 | 32.900 | 231 | 116 | 3 | 50 | 241 | 4 | 234 | 5.04e-27 | 111 |
| Msa0073040 | MtrunA17_Chr8g0385241 | 27.532 | 385 | 189 | 11 | 56 | 364 | 15 | 385 | 3.90e-25 | 109 |
| Msa0073040 | MtrunA17_Chr8g0385241 | 32.212 | 208 | 128 | 3 | 26 | 220 | 98 | 305 | 1.18e-22 | 101 |
| Msa0073040 | MtrunA17_Chr8g0385241 | 30.573 | 157 | 108 | 1 | 45 | 200 | 175 | 331 | 5.42e-13 | 72.0 |
| Msa0073040 | MtrunA17_Chr8g0385241 | 34.426 | 122 | 80 | 0 | 101 | 222 | 14 | 135 | 1.82e-12 | 70.5 |
| Msa0073040 | MtrunA17_Chr8g0377211 | 39.231 | 130 | 79 | 0 | 78 | 207 | 23 | 152 | 4.69e-22 | 94.0 |
| Msa0073040 | MtrunA17_Chr8g0377211 | 42.991 | 107 | 61 | 0 | 124 | 230 | 23 | 129 | 8.37e-22 | 93.2 |
| Msa0073040 | MtrunA17_Chr8g0377211 | 30.769 | 117 | 81 | 0 | 45 | 161 | 36 | 152 | 5.58e-11 | 62.0 |
| Msa0073040 | MtrunA17_Chr8g0336161 | 33.721 | 172 | 91 | 1 | 56 | 227 | 225 | 373 | 5.56e-21 | 97.1 |
| Msa0073040 | MtrunA17_Chr8g0336161 | 29.082 | 196 | 114 | 2 | 37 | 232 | 185 | 355 | 2.84e-19 | 91.7 |
| Msa0073040 | MtrunA17_Chr8g0336161 | 34.074 | 135 | 89 | 0 | 46 | 180 | 238 | 372 | 7.29e-13 | 71.6 |
| Msa0073040 | MtrunA17_Chr8g0336161 | 34.545 | 110 | 72 | 0 | 124 | 233 | 201 | 310 | 9.40e-13 | 71.2 |
| Msa0073040 | MtrunA17_Chr7g0233351 | 32.258 | 186 | 123 | 1 | 52 | 234 | 193 | 378 | 7.52e-21 | 96.7 |
| Msa0073040 | MtrunA17_Chr7g0233351 | 32.298 | 161 | 109 | 0 | 72 | 232 | 190 | 350 | 1.53e-20 | 95.5 |
| Msa0073040 | MtrunA17_Chr7g0233351 | 33.871 | 124 | 59 | 1 | 133 | 233 | 182 | 305 | 3.44e-12 | 69.7 |
| Msa0073040 | MtrunA17_Chr4g0055371 | 30.049 | 203 | 134 | 2 | 72 | 274 | 170 | 364 | 1.08e-20 | 95.9 |
| Msa0073040 | MtrunA17_Chr4g0055371 | 31.818 | 176 | 120 | 0 | 52 | 227 | 173 | 348 | 6.59e-20 | 93.2 |
| Msa0073040 | MtrunA17_Chr4g0055371 | 29.592 | 196 | 131 | 3 | 8 | 203 | 159 | 347 | 9.08e-18 | 86.7 |
| Msa0073040 | MtrunA17_Chr4g0055371 | 33.133 | 166 | 86 | 3 | 68 | 233 | 145 | 285 | 9.99e-15 | 77.4 |
| Msa0073040 | MtrunA17_Chr3g0114791 | 32.121 | 165 | 112 | 0 | 68 | 232 | 179 | 343 | 1.39e-20 | 95.5 |
| Msa0073040 | MtrunA17_Chr3g0114791 | 30.636 | 173 | 120 | 0 | 52 | 224 | 186 | 358 | 1.72e-18 | 89.0 |
| Msa0073040 | MtrunA17_Chr3g0114791 | 33.333 | 138 | 69 | 2 | 96 | 233 | 184 | 298 | 2.80e-14 | 75.9 |
| Msa0073040 | MtrunA17_Chr3g0114791 | 29.730 | 148 | 81 | 1 | 56 | 180 | 213 | 360 | 4.98e-13 | 72.0 |
| Msa0073040 | MtrunA17_Chr5g0424111 | 31.609 | 174 | 119 | 0 | 59 | 232 | 182 | 355 | 3.45e-20 | 94.4 |
| Msa0073040 | MtrunA17_Chr5g0424111 | 32.948 | 173 | 116 | 0 | 52 | 224 | 198 | 370 | 7.62e-20 | 93.2 |
| Msa0073040 | MtrunA17_Chr5g0424111 | 34.058 | 138 | 68 | 2 | 96 | 233 | 196 | 310 | 2.10e-15 | 79.7 |
| Msa0073040 | MtrunA17_Chr5g0424111 | 34.848 | 132 | 86 | 0 | 49 | 180 | 241 | 372 | 1.11e-13 | 74.3 |
| Msa0073040 | MtrunA17_Chr8g0383331 | 32.484 | 157 | 101 | 2 | 94 | 245 | 1 | 157 | 5.29e-18 | 82.0 |
| Msa0073040 | MtrunA17_Chr8g0383331 | 32.667 | 150 | 101 | 0 | 48 | 197 | 1 | 150 | 8.16e-18 | 81.6 |
| Msa0073040 | MtrunA17_Chr8g0383331 | 31.757 | 148 | 101 | 0 | 73 | 220 | 3 | 150 | 8.31e-15 | 73.2 |
| Msa0073040 | MtrunA17_Chr5g0398011 | 34.752 | 141 | 69 | 1 | 48 | 188 | 32 | 149 | 1.33e-16 | 77.8 |
| Msa0073040 | MtrunA17_Chr5g0398011 | 36.036 | 111 | 71 | 0 | 97 | 207 | 35 | 145 | 1.41e-14 | 72.0 |
| Msa0073040 | MtrunA17_Chr5g0398021 | 33.594 | 128 | 62 | 1 | 48 | 175 | 10 | 114 | 1.99e-14 | 71.6 |
| Msa0073040 | MtrunA17_Chr5g0398021 | 34.694 | 98 | 64 | 0 | 99 | 196 | 15 | 112 | 4.76e-11 | 62.0 |
| Msa0073040 | MtrunA17_Chr8g0383551 | 28.774 | 212 | 103 | 8 | 56 | 219 | 33 | 244 | 6.69e-14 | 74.3 |
| Msa0073040 | MtrunA17_Chr8g0383551 | 31.169 | 154 | 94 | 3 | 73 | 214 | 109 | 262 | 4.98e-13 | 71.6 |
| Msa0073040 | MtrunA17_Chr8g0383551 | 25.364 | 343 | 200 | 13 | 78 | 389 | 32 | 349 | 6.58e-13 | 71.2 |
| Msa0073040 | MtrunA17_Chr8g0377201 | 43.750 | 64 | 36 | 0 | 142 | 205 | 3 | 66 | 8.92e-13 | 64.7 |
| Msa0073040 | MtrunA17_Chr1g0210831 | 26.490 | 151 | 88 | 1 | 53 | 203 | 615 | 742 | 1.81e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073040 | AT3G09920.3 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
| Msa0073040 | AT3G09920.4 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
| Msa0073040 | AT3G09920.2 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
| Msa0073040 | AT3G09920.1 | 73.129 | 815 | 203 | 6 | 6 | 814 | 8 | 812 | 0.0 | 1237 |
| Msa0073040 | AT1G60890.1 | 50.576 | 781 | 356 | 8 | 44 | 812 | 4 | 766 | 0.0 | 766 |
| Msa0073040 | AT1G60890.2 | 50.578 | 779 | 355 | 8 | 46 | 812 | 18 | 778 | 0.0 | 764 |
| Msa0073040 | AT1G10900.2 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
| Msa0073040 | AT1G10900.1 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
| Msa0073040 | AT1G10900.3 | 49.744 | 780 | 351 | 11 | 43 | 812 | 3 | 751 | 0.0 | 748 |
| Msa0073040 | AT2G41210.1 | 43.451 | 794 | 347 | 15 | 38 | 811 | 57 | 768 | 0.0 | 624 |
| Msa0073040 | AT3G56960.2 | 43.056 | 792 | 348 | 17 | 46 | 814 | 67 | 778 | 0.0 | 613 |
| Msa0073040 | AT3G56960.1 | 43.056 | 792 | 348 | 17 | 46 | 814 | 67 | 778 | 0.0 | 613 |
| Msa0073040 | AT1G21980.1 | 42.703 | 740 | 332 | 14 | 97 | 811 | 76 | 748 | 0.0 | 541 |
| Msa0073040 | AT1G21980.1 | 48.295 | 176 | 91 | 0 | 47 | 222 | 72 | 247 | 8.14e-51 | 191 |
| Msa0073040 | AT1G21980.1 | 29.927 | 137 | 71 | 2 | 37 | 173 | 133 | 244 | 8.95e-13 | 72.8 |
| Msa0073040 | AT1G77740.2 | 43.221 | 745 | 322 | 16 | 97 | 811 | 77 | 750 | 1.23e-179 | 535 |
| Msa0073040 | AT1G77740.2 | 46.591 | 176 | 94 | 0 | 47 | 222 | 73 | 248 | 1.89e-51 | 193 |
| Msa0073040 | AT1G77740.2 | 36.905 | 84 | 53 | 0 | 46 | 129 | 164 | 247 | 2.61e-11 | 67.8 |
| Msa0073040 | AT1G77740.1 | 43.221 | 745 | 322 | 16 | 97 | 811 | 77 | 750 | 1.23e-179 | 535 |
| Msa0073040 | AT1G77740.1 | 46.591 | 176 | 94 | 0 | 47 | 222 | 73 | 248 | 1.89e-51 | 193 |
| Msa0073040 | AT1G77740.1 | 36.905 | 84 | 53 | 0 | 46 | 129 | 164 | 247 | 2.61e-11 | 67.8 |
| Msa0073040 | AT2G26420.2 | 38.564 | 822 | 373 | 12 | 7 | 811 | 9 | 715 | 7.64e-177 | 526 |
| Msa0073040 | AT2G26420.3 | 38.564 | 822 | 373 | 12 | 7 | 811 | 9 | 715 | 7.64e-177 | 526 |
| Msa0073040 | AT2G26420.1 | 38.808 | 822 | 357 | 14 | 7 | 811 | 9 | 701 | 4.78e-176 | 524 |
| Msa0073040 | AT3G07960.1 | 39.873 | 785 | 368 | 20 | 47 | 811 | 11 | 711 | 1.03e-174 | 521 |
| Msa0073040 | AT3G07960.1 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 5.63e-28 | 121 |
| Msa0073040 | AT3G07960.2 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.71e-143 | 436 |
| Msa0073040 | AT3G07960.2 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 1.01e-27 | 119 |
| Msa0073040 | AT3G07960.4 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.71e-143 | 436 |
| Msa0073040 | AT3G07960.4 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 1.01e-27 | 119 |
| Msa0073040 | AT3G07960.3 | 40.422 | 616 | 309 | 13 | 47 | 649 | 11 | 581 | 3.80e-143 | 436 |
| Msa0073040 | AT3G07960.3 | 34.483 | 174 | 68 | 1 | 46 | 173 | 22 | 195 | 7.55e-28 | 120 |
| Msa0073040 | AT4G01190.3 | 37.037 | 405 | 228 | 6 | 424 | 811 | 6 | 400 | 3.37e-83 | 272 |
| Msa0073040 | AT4G01190.2 | 37.037 | 405 | 228 | 6 | 424 | 811 | 6 | 400 | 3.37e-83 | 272 |
| Msa0073040 | AT4G01190.1 | 38.786 | 379 | 205 | 6 | 450 | 811 | 22 | 390 | 6.27e-83 | 271 |
| Msa0073040 | AT1G01460.1 | 37.619 | 420 | 226 | 7 | 424 | 811 | 4 | 419 | 3.47e-82 | 270 |
| Msa0073040 | AT1G77660.1 | 33.333 | 165 | 110 | 0 | 68 | 232 | 172 | 336 | 2.14e-21 | 98.2 |
| Msa0073040 | AT1G77660.1 | 31.429 | 175 | 120 | 0 | 50 | 224 | 177 | 351 | 7.43e-19 | 90.5 |
| Msa0073040 | AT1G77660.1 | 34.058 | 138 | 68 | 2 | 96 | 233 | 177 | 291 | 4.34e-15 | 79.0 |
| Msa0073040 | AT1G77660.1 | 28.378 | 148 | 83 | 1 | 56 | 180 | 206 | 353 | 5.22e-12 | 69.3 |
| Msa0073040 | AT4G17080.1 | 33.125 | 160 | 107 | 0 | 73 | 232 | 256 | 415 | 3.25e-21 | 98.6 |
| Msa0073040 | AT4G17080.1 | 32.759 | 174 | 117 | 0 | 52 | 225 | 258 | 431 | 3.58e-20 | 95.5 |
| Msa0073040 | AT4G17080.1 | 33.108 | 148 | 99 | 0 | 56 | 203 | 285 | 432 | 1.60e-19 | 93.6 |
| Msa0073040 | AT4G17080.1 | 34.532 | 139 | 68 | 2 | 95 | 233 | 255 | 370 | 7.47e-15 | 78.6 |
| Msa0073040 | AT4G17080.1 | 34.109 | 129 | 85 | 0 | 53 | 181 | 305 | 433 | 3.25e-13 | 73.6 |
| Msa0073040 | AT2G35170.1 | 33.548 | 155 | 103 | 0 | 78 | 232 | 230 | 384 | 5.90e-21 | 97.8 |
| Msa0073040 | AT2G35170.1 | 35.135 | 148 | 96 | 0 | 56 | 203 | 254 | 401 | 1.08e-20 | 96.7 |
| Msa0073040 | AT2G35170.1 | 32.353 | 170 | 115 | 0 | 56 | 225 | 231 | 400 | 8.25e-20 | 94.0 |
| Msa0073040 | AT2G35170.1 | 35.211 | 142 | 92 | 0 | 53 | 194 | 274 | 415 | 2.36e-15 | 80.1 |
| Msa0073040 | AT2G35170.1 | 34.586 | 133 | 64 | 2 | 101 | 233 | 230 | 339 | 1.01e-13 | 75.1 |
| Msa0073040 | AT1G21920.1 | 32.727 | 165 | 111 | 0 | 68 | 232 | 168 | 332 | 7.41e-21 | 96.7 |
| Msa0073040 | AT1G21920.1 | 35.135 | 148 | 96 | 0 | 56 | 203 | 202 | 349 | 5.93e-19 | 90.9 |
| Msa0073040 | AT1G21920.1 | 31.159 | 138 | 72 | 2 | 96 | 233 | 173 | 287 | 6.69e-13 | 72.0 |
| Msa0073040 | AT1G21920.2 | 32.727 | 165 | 111 | 0 | 68 | 232 | 168 | 332 | 1.45e-20 | 95.1 |
| Msa0073040 | AT1G21920.2 | 35.135 | 148 | 96 | 0 | 56 | 203 | 202 | 349 | 1.07e-18 | 89.4 |
| Msa0073040 | AT1G21920.2 | 31.159 | 138 | 72 | 2 | 96 | 233 | 173 | 287 | 1.87e-12 | 70.1 |
| Msa0073040 | AT1G75010.1 | 25.676 | 148 | 87 | 1 | 56 | 203 | 607 | 731 | 2.30e-12 | 71.2 |
| Msa0073040 | AT1G75010.1 | 31.496 | 127 | 87 | 0 | 99 | 225 | 604 | 730 | 3.83e-11 | 67.4 |
| Msa0073040 | AT1G71010.1 | 30.882 | 204 | 121 | 8 | 457 | 645 | 1378 | 1576 | 8.84e-11 | 66.6 |
Find 259 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGTAGGTCAGACTTTC+TGG | 0.032461 | 1_2:-46283155 | None:intergenic |
| CATTTGATGGGAACACTTTC+TGG | 0.101303 | 1_2:-46289811 | None:intergenic |
| GGCTAACGGAAATGTATATT+TGG | 0.153313 | 1_2:+46283292 | Msa0073040:CDS |
| CATAGAAGATTTGATTTAAA+AGG | 0.178433 | 1_2:+46287109 | Msa0073040:CDS |
| GGAAAACGAGTCGCGAAATT+TGG | 0.189939 | 1_2:+46281290 | Msa0073040:five_prime_UTR |
| CATATATTCACGCTCCAAAA+TGG | 0.193595 | 1_2:-46283840 | None:intergenic |
| CCCTTGAAACTTTGTCCTTT+TGG | 0.197545 | 1_2:-46282668 | None:intergenic |
| TAACGAAAAGATCCCCATTT+TGG | 0.204980 | 1_2:+46283826 | Msa0073040:CDS |
| TAACACTGCTTCAGTTGATA+TGG | 0.226428 | 1_2:+46283601 | Msa0073040:CDS |
| GAAGTTCGAGCATCGGATTT+TGG | 0.230682 | 1_2:+46285062 | Msa0073040:CDS |
| CCGTTTGTCAATATAGATAT+AGG | 0.267813 | 1_2:-46282870 | None:intergenic |
| ATTCTACTCTCGTCGCTTCC+TGG | 0.269786 | 1_2:+46289781 | Msa0073040:CDS |
| GGTATCTGCTCTGCCCTTGC+TGG | 0.270097 | 1_2:-46289599 | None:intergenic |
| CCCGGTGAACAAATTATTAA+AGG | 0.280312 | 1_2:+46283965 | Msa0073040:CDS |
| TTTGAAGGAAGCTGGTTAAA+TGG | 0.303077 | 1_2:+46283377 | Msa0073040:CDS |
| GTCAATTGAGAACCTTCTTT+AGG | 0.304786 | 1_2:-46285113 | None:intergenic |
| ATGGACTATAGTCTTCTTCT+AGG | 0.307126 | 1_2:+46287846 | Msa0073040:CDS |
| TGAGACTGACAGCAAGTTCT+TGG | 0.307848 | 1_2:+46287809 | Msa0073040:CDS |
| CTGGCATGTTCACACCTAAC+TGG | 0.309968 | 1_2:-46289580 | None:intergenic |
| CTTTATCCTGGCACATTTGA+TGG | 0.312989 | 1_2:-46289824 | None:intergenic |
| GATGGCAGACAGCTTCCTTT+TGG | 0.316804 | 1_2:-46283497 | None:intergenic |
| GAATACCACTCTTAAAGATT+TGG | 0.317905 | 1_2:+46287174 | Msa0073040:CDS |
| CAGTTCCGCTTTGTTGTAAT+GGG | 0.331322 | 1_2:+46287058 | Msa0073040:intron |
| TGAAAGGCGGTGGAGTTTAG+AGG | 0.341412 | 1_2:+46283724 | Msa0073040:CDS |
| GAGATTGATCCAGATTTAAC+AGG | 0.341541 | 1_2:-46283682 | None:intergenic |
| GGGAAAATACAATGGCCTTC+TGG | 0.345502 | 1_2:+46283071 | Msa0073040:CDS |
| CACAGAAAACCTGTTAAATC+TGG | 0.351274 | 1_2:+46283673 | Msa0073040:CDS |
| CGGCAACGTTCCCGAGGGTC+AGG | 0.351945 | 1_2:+46282980 | Msa0073040:CDS |
| CGCATATACTTGGGGTGATG+GGG | 0.352244 | 1_2:+46283418 | Msa0073040:CDS |
| CTGGCCCCTCAGGATTTCCT+TGG | 0.353999 | 1_2:-46283256 | None:intergenic |
| ATTACTGCCCTATGGTGTTC+AGG | 0.369775 | 1_2:+46285171 | Msa0073040:CDS |
| CAGGCAAAGGAACCCTTACC+TGG | 0.372399 | 1_2:+46283339 | Msa0073040:CDS |
| TTAGTTTGCAGCTCGGAATA+AGG | 0.372857 | 1_2:+46284011 | Msa0073040:CDS |
| CCTAATGGCGAGTCATATTC+CGG | 0.375150 | 1_2:+46282948 | Msa0073040:CDS |
| GAATCGCCATCGACCTTTGT+AGG | 0.376437 | 1_2:-46283168 | None:intergenic |
| CACGGTACAGGATCATATAT+TGG | 0.377388 | 1_2:+46283131 | Msa0073040:CDS |
| GGTCATTCCACTGAAATTGC+TGG | 0.377930 | 1_2:+46282900 | Msa0073040:CDS |
| GCAGTTCCGCTTTGTTGTAA+TGG | 0.378074 | 1_2:+46287057 | Msa0073040:intron |
| TCTTGTAGCTGTTGAGAATC+CGG | 0.379553 | 1_2:+46282731 | Msa0073040:five_prime_UTR |
| AGGGGCCAGGCAAGTATACC+TGG | 0.381587 | 1_2:+46283270 | Msa0073040:CDS |
| ATGGTCTTGGCGCATATACT+TGG | 0.382832 | 1_2:+46283408 | Msa0073040:CDS |
| GAGATATATTTGAAGGCTCT+TGG | 0.382922 | 1_2:+46283231 | Msa0073040:CDS |
| GTTTGATTCGTTATCTATAT+CGG | 0.383128 | 1_2:+46289745 | Msa0073040:CDS |
| GCCTTTAATAATTTGTTCAC+CGG | 0.383988 | 1_2:-46283966 | None:intergenic |
| TCGAACTTCTCGTCTCTGTA+TGG | 0.387041 | 1_2:-46285048 | None:intergenic |
| GCGCATATACTTGGGGTGAT+GGG | 0.388619 | 1_2:+46283417 | Msa0073040:CDS |
| AAGGTCTTGTTCTGGTCCCT+CGG | 0.390579 | 1_2:+46288802 | Msa0073040:CDS |
| CGAACTTCTCGTCTCTGTAT+GGG | 0.392097 | 1_2:-46285047 | None:intergenic |
| GGGATAGTTATAATTCTATA+AGG | 0.394517 | 1_2:+46282752 | Msa0073040:five_prime_UTR |
| CGTGGCCACAGTTAGTAGTT+TGG | 0.396056 | 1_2:+46282809 | Msa0073040:CDS |
| TTCACATGATGATGATAATC+TGG | 0.397576 | 1_2:-46286735 | None:intergenic |
| ACAAAGCATGCATGCACAAA+AGG | 0.398202 | 1_2:-46289904 | None:intergenic |
| GTATACTTGCCTGGCCCCTC+AGG | 0.398524 | 1_2:-46283266 | None:intergenic |
| CCATCTGAACTTATACTAAC+AGG | 0.402778 | 1_2:-46287903 | None:intergenic |
| CTTTGTAGGTCAGACTTTCT+GGG | 0.403996 | 1_2:-46283154 | None:intergenic |
| AGAATAAAGTCAAGTGTTGT+AGG | 0.407972 | 1_2:-46281385 | None:intergenic |
| ATATATTCACGCTCCAAAAT+GGG | 0.411809 | 1_2:-46283839 | None:intergenic |
| CCGGAATATGACTCGCCATT+AGG | 0.412364 | 1_2:-46282948 | None:intergenic |
| GGCGCATATACTTGGGGTGA+TGG | 0.412463 | 1_2:+46283416 | Msa0073040:CDS |
| CAAAGCATCATTTCCACAAA+TGG | 0.412721 | 1_2:-46285895 | None:intergenic |
| CTCATCGATTTCTATCTTGT+CGG | 0.415967 | 1_2:-46287152 | None:intergenic |
| ATTCATCCAAAAGCTTGCTT+TGG | 0.417999 | 1_2:-46285087 | None:intergenic |
| TAACAGGAGGACGCAGCTGC+TGG | 0.418233 | 1_2:-46287887 | None:intergenic |
| TTGGTGCCAAAGCAAGCTTT+TGG | 0.418662 | 1_2:+46285081 | Msa0073040:CDS |
| GCTAACGGAAATGTATATTT+GGG | 0.418772 | 1_2:+46283293 | Msa0073040:CDS |
| GATTTAAAAGGTTCATCCCT+TGG | 0.420681 | 1_2:+46287121 | Msa0073040:CDS |
| TCATATTCCGGATCCCTTCT+CGG | 0.428398 | 1_2:+46282960 | Msa0073040:CDS |
| AGGTCTTGTTCTGGTCCCTC+GGG | 0.429600 | 1_2:+46288803 | Msa0073040:CDS |
| CTATCCTCAAGGTCTTGTTC+TGG | 0.430649 | 1_2:+46288794 | Msa0073040:CDS |
| TAGTATAAGTTCAGATGGTT+TGG | 0.431889 | 1_2:+46287908 | Msa0073040:CDS |
| CCTTCAAATATATCTCCATT+TGG | 0.434696 | 1_2:-46283224 | None:intergenic |
| TTTGGTGAGACCCGGAGAAC+AGG | 0.435312 | 1_2:+46283635 | Msa0073040:CDS |
| ACGGAACACCACCTGTTCTC+CGG | 0.436364 | 1_2:-46283646 | None:intergenic |
| GCATATACTTGGGGTGATGG+GGG | 0.437543 | 1_2:+46283419 | Msa0073040:CDS |
| GGTTATCAAGTTTATCCAAA+TGG | 0.441746 | 1_2:+46283209 | Msa0073040:CDS |
| GATATGGGAAATGCTAGATT+TGG | 0.444711 | 1_2:+46283617 | Msa0073040:CDS |
| TTACTTGGAGCCGTCTTGGC+GGG | 0.446907 | 1_2:+46287213 | Msa0073040:CDS |
| CGATTGCGAGCTTCAGCTGC+TGG | 0.449991 | 1_2:+46288873 | Msa0073040:CDS |
| ATGAAAGGTGGGACAATGTC+AGG | 0.450369 | 1_2:+46283320 | Msa0073040:CDS |
| AGCTGCTGGTGACGAGGAGG+TGG | 0.451559 | 1_2:+46288887 | Msa0073040:CDS |
| CCAAATGGAGATATATTTGA+AGG | 0.451632 | 1_2:+46283224 | Msa0073040:CDS |
| AGATTTGAGAAAACAGAATC+AGG | 0.458804 | 1_2:+46283568 | Msa0073040:CDS |
| AACGTTGCCGAGAAGGGATC+CGG | 0.460862 | 1_2:-46282967 | None:intergenic |
| AGACATGCATAATGATCAAA+AGG | 0.461373 | 1_2:-46282781 | None:intergenic |
| ATATGATGGTGAGTGGAGAC+GGG | 0.461506 | 1_2:+46283031 | Msa0073040:CDS |
| CATATACTTGGGGTGATGGG+GGG | 0.462159 | 1_2:+46283420 | Msa0073040:CDS |
| CAAAACGAAACGAAACTCAT+TGG | 0.463122 | 1_2:+46281269 | Msa0073040:five_prime_UTR |
| TATATGATGGTGAGTGGAGA+CGG | 0.465323 | 1_2:+46283030 | Msa0073040:CDS |
| AGAACAGGTGGTGTTCCGTC+TGG | 0.468196 | 1_2:+46283650 | Msa0073040:CDS |
| AAGATTACAACATGACTAAG+AGG | 0.470669 | 1_2:+46289696 | Msa0073040:CDS |
| CGGAACACCACCTGTTCTCC+GGG | 0.474120 | 1_2:-46283645 | None:intergenic |
| TTATAGAATTATAACTATCC+CGG | 0.476448 | 1_2:-46282750 | None:intergenic |
| CTATGTTGGGACATGGACAC+GGG | 0.476652 | 1_2:+46283445 | Msa0073040:CDS |
| TGCAGACTTCAAATCCAGTT+AGG | 0.478493 | 1_2:+46289566 | Msa0073040:intron |
| CGTTTGTCAATATAGATATA+GGG | 0.484716 | 1_2:-46282869 | None:intergenic |
| GCAAGGGCAGAGCAGATACC+AGG | 0.484764 | 1_2:+46289602 | Msa0073040:CDS |
| TTGAGAGAACTATCGTCTCC+AGG | 0.486817 | 1_2:+46285915 | Msa0073040:CDS |
| GCTATGTTGGGACATGGACA+CGG | 0.491026 | 1_2:+46283444 | Msa0073040:CDS |
| AGACAAGAATGGTTGCAGAT+AGG | 0.491551 | 1_2:-46282711 | None:intergenic |
| CTTGGAGGAACAGCACATAA+TGG | 0.491731 | 1_2:+46287827 | Msa0073040:CDS |
| ATATTGACAAACGGCGAAGC+TGG | 0.492267 | 1_2:+46282879 | Msa0073040:CDS |
| CAAGGAAATCCTGAGGGGCC+AGG | 0.493390 | 1_2:+46283257 | Msa0073040:CDS |
| CCTGTTAGTATAAGTTCAGA+TGG | 0.493551 | 1_2:+46287903 | Msa0073040:CDS |
| AACACTGCTTCAGTTGATAT+GGG | 0.495094 | 1_2:+46283602 | Msa0073040:CDS |
| AGGGTCAGGGTAAGTATGTA+TGG | 0.497129 | 1_2:+46282994 | Msa0073040:CDS |
| GCAAGAATGTTTCTCTTGAA+AGG | 0.498157 | 1_2:+46283708 | Msa0073040:CDS |
| ATGTTTCTCTTGAAAGGCGG+TGG | 0.498163 | 1_2:+46283714 | Msa0073040:CDS |
| GTTAACCTCTTTATTTCCAT+CGG | 0.499478 | 1_2:-46283807 | None:intergenic |
| GTAGCTATTGAGAAAGTGAT+TGG | 0.500108 | 1_2:+46283746 | Msa0073040:CDS |
| AACAGGAGGACGCAGCTGCT+GGG | 0.500261 | 1_2:-46287886 | None:intergenic |
| GGGGAACTCTCTCTTCCTAA+TGG | 0.501996 | 1_2:+46282933 | Msa0073040:CDS |
| TTTGAAGGCTCTTGGATCCA+AGG | 0.502212 | 1_2:+46283239 | Msa0073040:CDS |
| TATACCTTCAAGTGGCCAAA+AGG | 0.503382 | 1_2:+46286806 | Msa0073040:CDS |
| AATGGTATGATGCATGGTCT+TGG | 0.506505 | 1_2:+46283395 | Msa0073040:CDS |
| TTCGTTATCTATATCGGCGG+TGG | 0.508660 | 1_2:+46289751 | Msa0073040:CDS |
| GAGACTCGTTTGAAGGAAGC+TGG | 0.508961 | 1_2:+46283369 | Msa0073040:CDS |
| CTCGGGAACGTTGCCGAGAA+GGG | 0.509049 | 1_2:-46282973 | None:intergenic |
| GCCAAAAGGACAAAGTTTCA+AGG | 0.509283 | 1_2:+46282667 | Msa0073040:intron |
| AAGTTACTCAAACTTTATCC+TGG | 0.509319 | 1_2:-46289836 | None:intergenic |
| TTCAATCTTAAACATGGCCT+AGG | 0.509691 | 1_2:+46283188 | Msa0073040:CDS |
| GTAAGTGGAGACTCGTTTGA+AGG | 0.510136 | 1_2:+46283362 | Msa0073040:CDS |
| AGTCTCCACTTACCCAGGTA+AGG | 0.510329 | 1_2:-46283352 | None:intergenic |
| CTTGTAGCTGTTGAGAATCC+GGG | 0.511102 | 1_2:+46282732 | Msa0073040:five_prime_UTR |
| GTCCCTCGGGGAGCAGATGA+TGG | 0.512041 | 1_2:+46288816 | Msa0073040:CDS |
| CCTCGGGAACGTTGCCGAGA+AGG | 0.514362 | 1_2:-46282974 | None:intergenic |
| TTGTATGAAGGTGAATTCTC+TGG | 0.515684 | 1_2:+46283098 | Msa0073040:CDS |
| TTTATCCTGGCACATTTGAT+GGG | 0.518514 | 1_2:-46289823 | None:intergenic |
| TTTACTTGGAGCCGTCTTGG+CGG | 0.518574 | 1_2:+46287212 | Msa0073040:CDS |
| AGATATACTTCTTGTGCAGA+TGG | 0.519993 | 1_2:-46283515 | None:intergenic |
| TAAACTAACCTGAACACCAT+AGG | 0.523925 | 1_2:-46285179 | None:intergenic |
| GGAACCCTTACCTGGGTAAG+TGG | 0.524147 | 1_2:+46283347 | Msa0073040:CDS |
| AAGAATTACCTTGCAGTACC+AGG | 0.524982 | 1_2:-46288921 | None:intergenic |
| ACTGAGAAGATCAGAAGTAA+AGG | 0.525732 | 1_2:+46285992 | Msa0073040:CDS |
| GGTGGCTATATCCACGGTAC+AGG | 0.525855 | 1_2:+46283119 | Msa0073040:CDS |
| GAACTTCTCGTCTCTGTATG+GGG | 0.526707 | 1_2:-46285046 | None:intergenic |
| GACTGACAGCAAGTTCTTGG+AGG | 0.527070 | 1_2:+46287812 | Msa0073040:CDS |
| TGATTCACAATTTGCCTCAA+CGG | 0.528838 | 1_2:+46283772 | Msa0073040:CDS |
| ATGGAAAGATTACTGCCCTA+TGG | 0.530066 | 1_2:+46285163 | Msa0073040:CDS |
| ACATACTTACCCTGACCCTC+GGG | 0.531555 | 1_2:-46282990 | None:intergenic |
| CAAAGCATGCATGCACAAAA+GGG | 0.532040 | 1_2:-46289903 | None:intergenic |
| GATGATGGTAGTGTTGTTGT+CGG | 0.532990 | 1_2:+46288831 | Msa0073040:CDS |
| TGGTCTTGGCGCATATACTT+GGG | 0.533338 | 1_2:+46283409 | Msa0073040:CDS |
| TACATACTTACCCTGACCCT+CGG | 0.534192 | 1_2:-46282991 | None:intergenic |
| GACTACATGATGTCCATTTG+TGG | 0.535966 | 1_2:+46285882 | Msa0073040:CDS |
| ATTTGGGAAATATGAAAGGT+GGG | 0.536411 | 1_2:+46283309 | Msa0073040:CDS |
| GTGTTCCCATCAAATGTGCC+AGG | 0.537171 | 1_2:+46289818 | Msa0073040:CDS |
| CCTTTAATAATTTGTTCACC+GGG | 0.538422 | 1_2:-46283965 | None:intergenic |
| AGAGCAGATACCAGGAAAAG+AGG | 0.538731 | 1_2:+46289610 | Msa0073040:CDS |
| AAATTGCCAAAGATATCAAA+AGG | 0.539194 | 1_2:+46283942 | Msa0073040:CDS |
| ACACTTTCTGGATAAAATCC+AGG | 0.539376 | 1_2:-46289799 | None:intergenic |
| CCTATATCTATATTGACAAA+CGG | 0.539708 | 1_2:+46282870 | Msa0073040:CDS |
| TTATGACGTCGTACTATACC+TGG | 0.539798 | 1_2:+46289655 | Msa0073040:CDS |
| TATTTGGGAAATATGAAAGG+TGG | 0.542050 | 1_2:+46283308 | Msa0073040:CDS |
| GCCAAAGATATCAAAAGGCC+CGG | 0.542683 | 1_2:+46283947 | Msa0073040:CDS |
| CTATCGTCTCCAGGGAAAAG+TGG | 0.543810 | 1_2:+46285924 | Msa0073040:CDS |
| AGCTTCAGCTGCTGGTGACG+AGG | 0.544007 | 1_2:+46288881 | Msa0073040:CDS |
| TTAGCCCAGGTATACTTGCC+TGG | 0.547788 | 1_2:-46283275 | None:intergenic |
| AAGCGACGAGAGTAGAATGT+AGG | 0.549703 | 1_2:-46289776 | None:intergenic |
| ACAGGAGGACGCAGCTGCTG+GGG | 0.554405 | 1_2:-46287885 | None:intergenic |
| GGTAAGTATGTATGGTCAGA+TGG | 0.555310 | 1_2:+46283002 | Msa0073040:CDS |
| AGTTTCAAGGGTCAATCACT+TGG | 0.555849 | 1_2:+46282680 | Msa0073040:five_prime_UTR |
| ACGGATTCAGTCTTCGCCGA+TGG | 0.557719 | 1_2:+46283791 | Msa0073040:CDS |
| AACAAATTATTAAAGGCCAC+AGG | 0.558304 | 1_2:+46283972 | Msa0073040:CDS |
| TAAAGTCAAGTGTTGTAGGT+GGG | 0.558407 | 1_2:-46281381 | None:intergenic |
| TCAGTGTCTTGATCATGAAA+CGG | 0.559373 | 1_2:-46285974 | None:intergenic |
| ATATGTTCTGCACAGAATTG+AGG | 0.559541 | 1_2:+46287083 | Msa0073040:CDS |
| TTCTCTGGTGGCTATATCCA+CGG | 0.561216 | 1_2:+46283113 | Msa0073040:CDS |
| TTGGCAATGCTTGCAGAGGA+AGG | 0.564272 | 1_2:+46287927 | Msa0073040:CDS |
| CAGCAGCTGAAGCTCGCAAT+CGG | 0.564387 | 1_2:-46288872 | None:intergenic |
| AAACTAACCTGAACACCATA+GGG | 0.565431 | 1_2:-46285178 | None:intergenic |
| CCTTCTGGTGTGTTGTATGA+AGG | 0.565486 | 1_2:+46283086 | Msa0073040:CDS |
| TTGGATAAACTTGATAACCT+AGG | 0.565805 | 1_2:-46283205 | None:intergenic |
| GTTGTCGGGTCACACATTAG+AGG | 0.566169 | 1_2:+46288846 | Msa0073040:CDS |
| TCTTGTCGGAAGAACGTCCA+AGG | 0.570830 | 1_2:-46287138 | None:intergenic |
| ATATACATTTCCGTTAGCCC+AGG | 0.571683 | 1_2:-46283288 | None:intergenic |
| CCTTCTCGGCAACGTTCCCG+AGG | 0.572618 | 1_2:+46282974 | Msa0073040:CDS |
| GTATATTTGGGAAATATGAA+AGG | 0.572931 | 1_2:+46283305 | Msa0073040:CDS |
| TGGACACGGGGTCTTAAAGA+TGG | 0.577970 | 1_2:+46283458 | Msa0073040:CDS |
| TTGGAGCGTGAATATATGCA+AGG | 0.578663 | 1_2:+46283845 | Msa0073040:CDS |
| ATGCTAGATTTGGTGAGACC+CGG | 0.578871 | 1_2:+46283627 | Msa0073040:CDS |
| GGCAAGTATACCTGGGCTAA+CGG | 0.580636 | 1_2:+46283278 | Msa0073040:CDS |
| TATATACTTCATCCTCTAGA+GGG | 0.582725 | 1_2:-46288770 | None:intergenic |
| CTTCGCCGATGGAAATAAAG+AGG | 0.582727 | 1_2:+46283802 | Msa0073040:CDS |
| CAAACTACTAACTGTGGCCA+CGG | 0.585273 | 1_2:-46282808 | None:intergenic |
| CAACAGCTACAAGACAAGAA+TGG | 0.585911 | 1_2:-46282722 | None:intergenic |
| GGCAACGTTCCCGAGGGTCA+GGG | 0.586924 | 1_2:+46282981 | Msa0073040:CDS |
| CACAGGATTATACCTTCAAG+TGG | 0.587271 | 1_2:+46286798 | Msa0073040:CDS |
| ATGATGGTAGTGTTGTTGTC+GGG | 0.587597 | 1_2:+46288832 | Msa0073040:CDS |
| CAAATCCAAATCTTTAAGAG+TGG | 0.589290 | 1_2:-46287179 | None:intergenic |
| TAGGTGTGAACATGCCAGCA+AGG | 0.591715 | 1_2:+46289585 | Msa0073040:CDS |
| TTCTTCTACCTGGTACTGCA+AGG | 0.594688 | 1_2:+46288913 | Msa0073040:CDS |
| GAGACGAGAAGTTCGAGCAT+CGG | 0.594986 | 1_2:+46285055 | Msa0073040:CDS |
| CCTTCATACAACACACCAGA+AGG | 0.602183 | 1_2:-46283086 | None:intergenic |
| TTCAGCTGCTGGTGACGAGG+AGG | 0.602690 | 1_2:+46288884 | Msa0073040:CDS |
| CCAAAAGGACAAAGTTTCAA+GGG | 0.603673 | 1_2:+46282668 | Msa0073040:five_prime_UTR |
| ATAAAGTCAAGTGTTGTAGG+TGG | 0.605120 | 1_2:-46281382 | None:intergenic |
| TGGATCCAAGGAAATCCTGA+GGG | 0.606779 | 1_2:+46283251 | Msa0073040:CDS |
| TTATATACTTCATCCTCTAG+AGG | 0.607130 | 1_2:-46288771 | None:intergenic |
| TATATTCACGCTCCAAAATG+GGG | 0.608393 | 1_2:-46283838 | None:intergenic |
| AATAAAGACTCCCGCCAAGA+CGG | 0.610613 | 1_2:-46287223 | None:intergenic |
| ATTGACACCTCCTCATCAGT+CGG | 0.612372 | 1_2:+46285130 | Msa0073040:CDS |
| TGGAGCGTGAATATATGCAA+GGG | 0.612966 | 1_2:+46283846 | Msa0073040:CDS |
| TGAGAGAACTATCGTCTCCA+GGG | 0.613070 | 1_2:+46285916 | Msa0073040:CDS |
| GCAATATATCAATGATACCC+AGG | 0.613082 | 1_2:-46289673 | None:intergenic |
| CCAGAAAGTCTGACCTACAA+AGG | 0.613083 | 1_2:+46283155 | Msa0073040:CDS |
| GTCTGACCTACAAAGGTCGA+TGG | 0.613814 | 1_2:+46283162 | Msa0073040:CDS |
| TATGATGGTGAGTGGAGACG+GGG | 0.614874 | 1_2:+46283032 | Msa0073040:CDS |
| GTTGTGTATATGATGGTGAG+TGG | 0.615250 | 1_2:+46283024 | Msa0073040:CDS |
| AGGTGTGAACATGCCAGCAA+GGG | 0.616410 | 1_2:+46289586 | Msa0073040:CDS |
| CTGATGCTTAGTTTGCAGCT+CGG | 0.616521 | 1_2:+46284004 | Msa0073040:CDS |
| TCAAATGGCTAGGTATACTG+TGG | 0.619000 | 1_2:+46285013 | Msa0073040:intron |
| GTCTCCACTTACCCAGGTAA+GGG | 0.619943 | 1_2:-46283351 | None:intergenic |
| GCAAGGGGTATTAATAAGTG+AGG | 0.622233 | 1_2:+46283862 | Msa0073040:CDS |
| TGGTTTGGCAATGCTTGCAG+AGG | 0.623080 | 1_2:+46287923 | Msa0073040:CDS |
| TTAAAATCCTCCGACTGATG+AGG | 0.624649 | 1_2:-46285140 | None:intergenic |
| TACCATCATCTGCTCCCCGA+GGG | 0.625035 | 1_2:-46288818 | None:intergenic |
| GAAGTATATAACTATCCTCA+AGG | 0.626789 | 1_2:+46288783 | Msa0073040:CDS |
| TGGCGATTCAATCTTAAACA+TGG | 0.628373 | 1_2:+46283182 | Msa0073040:CDS |
| GGTCTTGGCGCATATACTTG+GGG | 0.631149 | 1_2:+46283410 | Msa0073040:CDS |
| TCTAAAACCAGCAATTTCAG+TGG | 0.631528 | 1_2:-46282907 | None:intergenic |
| ATGGATTTGGGAAAATACAA+TGG | 0.632638 | 1_2:+46283063 | Msa0073040:CDS |
| GGTGGGACAATGTCAGGCAA+AGG | 0.633057 | 1_2:+46283326 | Msa0073040:CDS |
| CTTCTCGGCAACGTTCCCGA+GGG | 0.634639 | 1_2:+46282975 | Msa0073040:CDS |
| GAGGTGGATCTTCTTCTACC+TGG | 0.635208 | 1_2:+46288903 | Msa0073040:CDS |
| AACTTCTCGTCTCTGTATGG+GGG | 0.638602 | 1_2:-46285045 | None:intergenic |
| AAATCCTCCGACTGATGAGG+AGG | 0.639574 | 1_2:-46285137 | None:intergenic |
| AAACGAGTCTCCACTTACCC+AGG | 0.643861 | 1_2:-46283357 | None:intergenic |
| TATGAAGGTGAATTCTCTGG+TGG | 0.644862 | 1_2:+46283101 | Msa0073040:CDS |
| ATGATGGTGAGTGGAGACGG+GGG | 0.645871 | 1_2:+46283033 | Msa0073040:CDS |
| TTGGATCCAAGGAAATCCTG+AGG | 0.646382 | 1_2:+46283250 | Msa0073040:CDS |
| ATTATGCATGTCTGGCTCCG+TGG | 0.646691 | 1_2:+46282791 | Msa0073040:exon |
| GCATCAGATCATAACTCCTG+TGG | 0.647690 | 1_2:-46283988 | None:intergenic |
| CGGGGTCTTAAAGATGGCAA+AGG | 0.648365 | 1_2:+46283464 | Msa0073040:CDS |
| GGTGAGACCCGGAGAACAGG+TGG | 0.648651 | 1_2:+46283638 | Msa0073040:CDS |
| TGGTTAAATGGTATGATGCA+TGG | 0.651397 | 1_2:+46283389 | Msa0073040:CDS |
| CAAATGGCTAGGTATACTGT+GGG | 0.653802 | 1_2:+46285014 | Msa0073040:intron |
| CTTGTCGGAAGAACGTCCAA+GGG | 0.656049 | 1_2:-46287137 | None:intergenic |
| ATCAACTACAGACCCTCTAG+AGG | 0.656438 | 1_2:+46288758 | Msa0073040:intron |
| AGAATGTTTCTCTTGAAAGG+CGG | 0.656927 | 1_2:+46283711 | Msa0073040:CDS |
| GGTCTTGTTCTGGTCCCTCG+GGG | 0.658058 | 1_2:+46288804 | Msa0073040:CDS |
| TTTCAACTTTCAATTCAACA+AGG | 0.658064 | 1_2:+46281413 | Msa0073040:five_prime_UTR |
| GGAGCGTGAATATATGCAAG+GGG | 0.659260 | 1_2:+46283847 | Msa0073040:CDS |
| TCAGATGGTTGTGTATATGA+TGG | 0.660600 | 1_2:+46283017 | Msa0073040:CDS |
| TATTTCCCATTACAACAAAG+CGG | 0.665063 | 1_2:-46287063 | None:intergenic |
| CTACCATCATCTGCTCCCCG+AGG | 0.672666 | 1_2:-46288819 | None:intergenic |
| TATGACGTCGTACTATACCT+GGG | 0.673057 | 1_2:+46289656 | Msa0073040:CDS |
| GACACCTCCTCATCAGTCGG+AGG | 0.674116 | 1_2:+46285133 | Msa0073040:CDS |
| GGCGAAGACTGAATCCGTTG+AGG | 0.675390 | 1_2:-46283786 | None:intergenic |
| AGGCAAAGGAACCCTTACCT+GGG | 0.686161 | 1_2:+46283340 | Msa0073040:CDS |
| GTACGACGTCATAAGCCTCG+TGG | 0.687876 | 1_2:-46289646 | None:intergenic |
| TCGATCCAAACTACTAACTG+TGG | 0.690124 | 1_2:-46282814 | None:intergenic |
| TGATTCGTTATCTATATCGG+CGG | 0.703435 | 1_2:+46289748 | Msa0073040:CDS |
| GGGGCCAGGCAAGTATACCT+GGG | 0.703812 | 1_2:+46283271 | Msa0073040:CDS |
| TCTGAACTTATACTAACAGG+AGG | 0.705844 | 1_2:-46287900 | None:intergenic |
| TATGTTGGGACATGGACACG+GGG | 0.713292 | 1_2:+46283446 | Msa0073040:CDS |
| GGGACCAGAACAAGACCTTG+AGG | 0.724705 | 1_2:-46288798 | None:intergenic |
| CAATATATGATCCTGTACCG+TGG | 0.736323 | 1_2:-46283130 | None:intergenic |
| GGATCCAAGGAAATCCTGAG+GGG | 0.751805 | 1_2:+46283252 | Msa0073040:CDS |
| GGAAACTCAAATGTTCCACG+AGG | 0.778032 | 1_2:+46289631 | Msa0073040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATATGATATGAAT+GGG | + | chr1_2:46282579-46282598 | Msa0073040:intron | 10.0% |
| !!! | TTATACTTTTTTTTTTTCTT+CGG | + | chr1_2:46284656-46284675 | Msa0073040:intron | 10.0% |
| !!! | AAGAAAATAATTTTTTTGTT+TGG | - | chr1_2:46286998-46287017 | None:intergenic | 10.0% |
| !!! | AATAAAATATTTTCTTACAA+TGG | - | chr1_2:46287293-46287312 | None:intergenic | 10.0% |
| !!! | AAGAATATTTTCTTATATAT+AGG | + | chr1_2:46287514-46287533 | Msa0073040:intron | 10.0% |
| !! | CATTCATATCATATAAAAAA+AGG | - | chr1_2:46282580-46282599 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATATGATATGAA+TGG | + | chr1_2:46282578-46282597 | Msa0073040:intron | 15.0% |
| !!! | TAATTAACTTGAATTGTTAA+TGG | - | chr1_2:46284578-46284597 | None:intergenic | 15.0% |
| !! | AAAAAGAAATAAAGTAGATT+TGG | + | chr1_2:46285687-46285706 | Msa0073040:intron | 15.0% |
| !!! | TAAGAAAATATTTTATTCCT+AGG | + | chr1_2:46287296-46287315 | Msa0073040:intron | 15.0% |
| !!! | AAGAATCTTTTCTTATATAT+AGG | - | chr1_2:46287415-46287434 | None:intergenic | 15.0% |
| !! | TTATTAAATTTGTACATTTG+AGG | + | chr1_2:46287552-46287571 | Msa0073040:intron | 15.0% |
| !!! | TGAACATGTAAAATATTTTA+AGG | + | chr1_2:46287619-46287638 | Msa0073040:intron | 15.0% |
| !! | TATAATTGTAAAACTTTGAT+TGG | - | chr1_2:46288577-46288596 | None:intergenic | 15.0% |
| !! | TTACAATTATATGATGATTA+TGG | + | chr1_2:46288586-46288605 | Msa0073040:intron | 15.0% |
| !!! | ATCATTTTAGAAATTCTTAT+AGG | + | chr1_2:46288614-46288633 | Msa0073040:intron | 15.0% |
| !!! | ACTTTTATGTTCATAAAATA+CGG | + | chr1_2:46289051-46289070 | Msa0073040:intron | 15.0% |
| !! | AATTCTGAATAAAAATAATC+TGG | - | chr1_2:46289865-46289884 | None:intergenic | 15.0% |
| !!! | AATTCTAAAATCAAAAGCTA+CGG | + | chr1_2:46281638-46281657 | Msa0073040:intron | 20.0% |
| !! | AGTCAAAATCAATTAAATTC+TGG | + | chr1_2:46281674-46281693 | Msa0073040:intron | 20.0% |
| !!! | TTTAGCAATTTTTGTGTTAT+GGG | + | chr1_2:46281809-46281828 | Msa0073040:intron | 20.0% |
| !! | TATATAAAAAACAGAGTAGT+CGG | - | chr1_2:46281981-46282000 | None:intergenic | 20.0% |
| !! | CAATATAATCATACACAAAA+TGG | - | chr1_2:46282136-46282155 | None:intergenic | 20.0% |
| !!! | TTATATTGTTTTTCTCCTTT+TGG | + | chr1_2:46282148-46282167 | Msa0073040:intron | 20.0% |
| !! | AAAAAATCATAAGAACCAAA+AGG | - | chr1_2:46282166-46282185 | None:intergenic | 20.0% |
| !!! | AGTTCAATTTCTTTTAGTTA+TGG | + | chr1_2:46282218-46282237 | Msa0073040:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr1_2:46282297-46282316 | Msa0073040:intron | 20.0% |
| !! | TTATAGAATTATAACTATCC+CGG | - | chr1_2:46282753-46282772 | None:intergenic | 20.0% |
| !! | TGGTTAAAAAACAAATATAG+GGG | - | chr1_2:46284471-46284490 | None:intergenic | 20.0% |
| !! | GTGGTTAAAAAACAAATATA+GGG | - | chr1_2:46284472-46284491 | None:intergenic | 20.0% |
| !! | TGTGGTTAAAAAACAAATAT+AGG | - | chr1_2:46284473-46284492 | None:intergenic | 20.0% |
| !! | AAATAGTATTTGTTTGCTTA+AGG | - | chr1_2:46284797-46284816 | None:intergenic | 20.0% |
| !!! | ACTTAATTTCTTCTAAAGTT+TGG | - | chr1_2:46284932-46284951 | None:intergenic | 20.0% |
| !! | TAGAAGAAATTAAGTTATTC+TGG | + | chr1_2:46284937-46284956 | Msa0073040:intron | 20.0% |
| !! | TTCTGTAAGTAACTTAAAAA+TGG | + | chr1_2:46284987-46285006 | Msa0073040:intron | 20.0% |
| !! | TCTGTAAGTAACTTAAAAAT+GGG | + | chr1_2:46284988-46285007 | Msa0073040:intron | 20.0% |
| !!! | AGGTTAGTTTAAACTTTTTT+AGG | + | chr1_2:46285191-46285210 | Msa0073040:intron | 20.0% |
| !! | GGAAAATTATAGAAACAATA+TGG | - | chr1_2:46285405-46285424 | None:intergenic | 20.0% |
| !!! | TAGAATTGTTTTTGTATACA+TGG | + | chr1_2:46285729-46285748 | Msa0073040:intron | 20.0% |
| !! | ATATATAACAAGCATATGAA+AGG | - | chr1_2:46285808-46285827 | None:intergenic | 20.0% |
| !!! | AATTTTCTATTCTAACTTCT+TGG | - | chr1_2:46286559-46286578 | None:intergenic | 20.0% |
| !!! | AGATTTTTTGAATTAACTTG+TGG | + | chr1_2:46286592-46286611 | Msa0073040:intron | 20.0% |
| !!! | CTTTTAAATCAAATCTTCTA+TGG | - | chr1_2:46287111-46287130 | None:intergenic | 20.0% |
| !!! | CATAGAAGATTTGATTTAAA+AGG | + | chr1_2:46287109-46287128 | Msa0073040:CDS | 20.0% |
| !!! | TATTTTCTTATATATAGGAC+CGG | + | chr1_2:46287519-46287538 | Msa0073040:intron | 20.0% |
| !! | AAACTTGAAATTCAAACAAA+TGG | - | chr1_2:46287692-46287711 | None:intergenic | 20.0% |
| !! | AATAAATGTCAATCACATAA+AGG | - | chr1_2:46287993-46288012 | None:intergenic | 20.0% |
| !!! | ATAAAATGCTTTTGTGAAAA+AGG | - | chr1_2:46288234-46288253 | None:intergenic | 20.0% |
| !!! | ATTTTGGATTTGTTGTATAT+TGG | + | chr1_2:46288486-46288505 | Msa0073040:intron | 20.0% |
| !!! | TAAGAATTTCTAAAATGATG+TGG | - | chr1_2:46288613-46288632 | None:intergenic | 20.0% |
| !! | TTGTTATAGCACTATAATTA+TGG | + | chr1_2:46288708-46288727 | Msa0073040:intron | 20.0% |
| !!! | CTTTTATGTTCATAAAATAC+GGG | + | chr1_2:46289052-46289071 | Msa0073040:intron | 20.0% |
| !! | ATATTCTAGCAACTATTTAA+TGG | - | chr1_2:46289509-46289528 | None:intergenic | 20.0% |
| !!! | TTTTATTCAGAATTTGTGAA+CGG | + | chr1_2:46289871-46289890 | Msa0073040:three_prime_UTR | 20.0% |
| !! | GTTTCGTTTTGTATTCTAAT+CGG | - | chr1_2:46281260-46281279 | None:intergenic | 25.0% |
| ! | TTTCAACTTTCAATTCAACA+AGG | + | chr1_2:46281413-46281432 | Msa0073040:five_prime_UTR | 25.0% |
| ! | ATATTTAGAGAGAGAAAAAG+AGG | - | chr1_2:46281447-46281466 | None:intergenic | 25.0% |
| ! | CAAAATCAATTAAATTCTGG+AGG | + | chr1_2:46281677-46281696 | Msa0073040:intron | 25.0% |
| ! | TGCATTCACATTATATTGAT+CGG | - | chr1_2:46281757-46281776 | None:intergenic | 25.0% |
| !! | GTTTAGCAATTTTTGTGTTA+TGG | + | chr1_2:46281808-46281827 | Msa0073040:intron | 25.0% |
| ! | TTTGTTTGTTTCAATCATGA+CGG | + | chr1_2:46281884-46281903 | Msa0073040:intron | 25.0% |
| ! | TGTTCAATATAAAGACTTTC+AGG | + | chr1_2:46282079-46282098 | Msa0073040:intron | 25.0% |
| !!! | TATAAAGACTTTCAGGTTTA+TGG | + | chr1_2:46282086-46282105 | Msa0073040:intron | 25.0% |
| ! | ATAATCATACACAAAATGGA+AGG | - | chr1_2:46282132-46282151 | None:intergenic | 25.0% |
| !!! | TCAATTTCTTTTAGTTATGG+TGG | + | chr1_2:46282221-46282240 | Msa0073040:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr1_2:46282272-46282291 | None:intergenic | 25.0% |
| ! | ATGATGATAGGAAAATAAGT+GGG | - | chr1_2:46282546-46282565 | None:intergenic | 25.0% |
| ! | GGGATAGTTATAATTCTATA+AGG | + | chr1_2:46282752-46282771 | Msa0073040:five_prime_UTR | 25.0% |
| ! | CGTTTGTCAATATAGATATA+GGG | - | chr1_2:46282872-46282891 | None:intergenic | 25.0% |
| ! | CCTATATCTATATTGACAAA+CGG | + | chr1_2:46282870-46282889 | Msa0073040:CDS | 25.0% |
| ! | GTATATTTGGGAAATATGAA+AGG | + | chr1_2:46283305-46283324 | Msa0073040:CDS | 25.0% |
| ! | AAATTGCCAAAGATATCAAA+AGG | + | chr1_2:46283942-46283961 | Msa0073040:CDS | 25.0% |
| !! | TTCTTATGGGAATTTTCATA+TGG | + | chr1_2:46284217-46284236 | Msa0073040:intron | 25.0% |
| ! | AGAAATGTGGTTATTGAAAA+TGG | + | chr1_2:46284497-46284516 | Msa0073040:intron | 25.0% |
| ! | GAAATGTGGTTATTGAAAAT+GGG | + | chr1_2:46284498-46284517 | Msa0073040:intron | 25.0% |
| !! | GCTTTGAATATCAGTAATTA+TGG | + | chr1_2:46284616-46284635 | Msa0073040:intron | 25.0% |
| !!! | AATGGAATATCTTGCTTTTT+GGG | - | chr1_2:46284731-46284750 | None:intergenic | 25.0% |
| !!! | AAATGGAATATCTTGCTTTT+TGG | - | chr1_2:46284732-46284751 | None:intergenic | 25.0% |
| ! | TATTCCATTTCATTTCCTAT+TGG | + | chr1_2:46284742-46284761 | Msa0073040:intron | 25.0% |
| ! | ATTCCATTTCATTTCCTATT+GGG | + | chr1_2:46284743-46284762 | Msa0073040:intron | 25.0% |
| !!! | TTTGGTTCTTTCATTGTATA+TGG | - | chr1_2:46284905-46284924 | None:intergenic | 25.0% |
| !!! | TATCAATATTTGCTTTTGCA+TGG | + | chr1_2:46284962-46284981 | Msa0073040:intron | 25.0% |
| !! | AATTCAGTAGTTACTTTAAG+AGG | - | chr1_2:46285374-46285393 | None:intergenic | 25.0% |
| ! | TTTCTAATATCAGAACACTA+AGG | - | chr1_2:46285426-46285445 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTATACATGGTA+AGG | + | chr1_2:46285734-46285753 | Msa0073040:intron | 25.0% |
| ! | TATTGATATACAAACTTCCT+TGG | + | chr1_2:46286064-46286083 | Msa0073040:intron | 25.0% |
| !! | TTCCATATTTCATTTTACCT+GGG | + | chr1_2:46286110-46286129 | Msa0073040:intron | 25.0% |
| !! | TTTTTCATATGTACATGATC+CGG | + | chr1_2:46286345-46286364 | Msa0073040:intron | 25.0% |
| ! | CATGAAGATGTAATAATGAT+AGG | - | chr1_2:46286975-46286994 | None:intergenic | 25.0% |
| ! | TAAATTACTTTGTTGAAGGA+GGG | - | chr1_2:46287348-46287367 | None:intergenic | 25.0% |
| !! | GTTCTAAATTACTTTGTTGA+AGG | - | chr1_2:46287352-46287371 | None:intergenic | 25.0% |
| !! | TCTTTTCTTATATATAGGAC+CGG | - | chr1_2:46287410-46287429 | None:intergenic | 25.0% |
| ! | ATTTAATAATATACTCCCTC+CGG | - | chr1_2:46287541-46287560 | None:intergenic | 25.0% |
| ! | GAAAGCTAATGTTTAGTAAT+TGG | + | chr1_2:46287967-46287986 | Msa0073040:intron | 25.0% |
| ! | ATGTGATTGACATTTATTTC+TGG | + | chr1_2:46287995-46288014 | Msa0073040:intron | 25.0% |
| !! | GATATAAACACTGCTTATTT+TGG | + | chr1_2:46288118-46288137 | Msa0073040:intron | 25.0% |
| !!! | CTGCTTATTTTGGTATTATT+AGG | + | chr1_2:46288128-46288147 | Msa0073040:intron | 25.0% |
| !! | GATGTAAAAGAAAGATTTTC+TGG | - | chr1_2:46288187-46288206 | None:intergenic | 25.0% |
| ! | GATTGTTTATTAACATGAGA+TGG | + | chr1_2:46288271-46288290 | Msa0073040:intron | 25.0% |
| !!! | AAATGTTAGGAGCTATTTTT+AGG | + | chr1_2:46288327-46288346 | Msa0073040:intron | 25.0% |
| !! | TCTTATTATGTCTTGCATTT+TGG | + | chr1_2:46288470-46288489 | Msa0073040:intron | 25.0% |
| !! | TTTTCTTCTTCTAACTGAAA+CGG | + | chr1_2:46288511-46288530 | Msa0073040:intron | 25.0% |
| ! | TTATCCGGTTATCTATAATT+TGG | + | chr1_2:46288638-46288657 | Msa0073040:intron | 25.0% |
| ! | TAGACCAAATTATAGATAAC+CGG | - | chr1_2:46288645-46288664 | None:intergenic | 25.0% |
| ! | GTAATTCTTCATGAGTTTAA+TGG | + | chr1_2:46288935-46288954 | Msa0073040:intron | 25.0% |
| ! | ACATGTACACATTTAAAAGT+AGG | - | chr1_2:46289298-46289317 | None:intergenic | 25.0% |
| !! | ACTTGGGATTATATTGATTA+AGG | + | chr1_2:46289462-46289481 | Msa0073040:intron | 25.0% |
| !! | GTTTGATTCGTTATCTATAT+CGG | + | chr1_2:46289745-46289764 | Msa0073040:CDS | 25.0% |
| ! | AGAATAAAGTCAAGTGTTGT+AGG | - | chr1_2:46281388-46281407 | None:intergenic | 30.0% |
| TCTGACAAAAAGTTAGTTGA+CGG | + | chr1_2:46281564-46281583 | Msa0073040:intron | 30.0% | |
| TCGAATTTATTGTTCGAATC+AGG | - | chr1_2:46281607-46281626 | None:intergenic | 30.0% | |
| TGGTCTGTCATATTTACAAT+CGG | + | chr1_2:46282386-46282405 | Msa0073040:intron | 30.0% | |
| GATGATGATAGGAAAATAAG+TGG | - | chr1_2:46282547-46282566 | None:intergenic | 30.0% | |
| GCATAAACAAAGATGATGAT+AGG | - | chr1_2:46282558-46282577 | None:intergenic | 30.0% | |
| ! | ACTTTTCTTTTGTAGCCAAA+AGG | + | chr1_2:46282653-46282672 | Msa0073040:intron | 30.0% |
| AGACATGCATAATGATCAAA+AGG | - | chr1_2:46282784-46282803 | None:intergenic | 30.0% | |
| ! | TTTTGATCATTATGCATGTC+TGG | + | chr1_2:46282783-46282802 | Msa0073040:exon | 30.0% |
| CCGTTTGTCAATATAGATAT+AGG | - | chr1_2:46282873-46282892 | None:intergenic | 30.0% | |
| !!! | AAATTGCTGGTTTTAGAGTA+GGG | + | chr1_2:46282913-46282932 | Msa0073040:CDS | 30.0% |
| ATGGATTTGGGAAAATACAA+TGG | + | chr1_2:46283063-46283082 | Msa0073040:CDS | 30.0% | |
| ! | TTGGATAAACTTGATAACCT+AGG | - | chr1_2:46283208-46283227 | None:intergenic | 30.0% |
| GGTTATCAAGTTTATCCAAA+TGG | + | chr1_2:46283209-46283228 | Msa0073040:CDS | 30.0% | |
| CCTTCAAATATATCTCCATT+TGG | - | chr1_2:46283227-46283246 | None:intergenic | 30.0% | |
| CCAAATGGAGATATATTTGA+AGG | + | chr1_2:46283224-46283243 | Msa0073040:CDS | 30.0% | |
| GCTAACGGAAATGTATATTT+GGG | + | chr1_2:46283293-46283312 | Msa0073040:CDS | 30.0% | |
| TATTTGGGAAATATGAAAGG+TGG | + | chr1_2:46283308-46283327 | Msa0073040:CDS | 30.0% | |
| ATTTGGGAAATATGAAAGGT+GGG | + | chr1_2:46283309-46283328 | Msa0073040:CDS | 30.0% | |
| ! | AAAGGAACCTTTTATCCAAA+AGG | + | chr1_2:46283482-46283501 | Msa0073040:CDS | 30.0% |
| TCAATGCATTGAGAAAAAGA+GGG | + | chr1_2:46283537-46283556 | Msa0073040:CDS | 30.0% | |
| ! | TGATTCTGTTTTCTCAAATC+TGG | - | chr1_2:46283569-46283588 | None:intergenic | 30.0% |
| AGATTTGAGAAAACAGAATC+AGG | + | chr1_2:46283568-46283587 | Msa0073040:CDS | 30.0% | |
| ! | GTTAACCTCTTTATTTCCAT+CGG | - | chr1_2:46283810-46283829 | None:intergenic | 30.0% |
| ATATATTCACGCTCCAAAAT+GGG | - | chr1_2:46283842-46283861 | None:intergenic | 30.0% | |
| !! | CCTTTAATAATTTGTTCACC+GGG | - | chr1_2:46283968-46283987 | None:intergenic | 30.0% |
| !! | GCCTTTAATAATTTGTTCAC+CGG | - | chr1_2:46283969-46283988 | None:intergenic | 30.0% |
| AACAAATTATTAAAGGCCAC+AGG | + | chr1_2:46283972-46283991 | Msa0073040:CDS | 30.0% | |
| TAAGGTAAAAGATACTGTCT+TGG | + | chr1_2:46284029-46284048 | Msa0073040:intron | 30.0% | |
| ! | AGGAGGTCATAATTTTCTTA+TGG | + | chr1_2:46284203-46284222 | Msa0073040:intron | 30.0% |
| ! | GGAGGTCATAATTTTCTTAT+GGG | + | chr1_2:46284204-46284223 | Msa0073040:intron | 30.0% |
| ! | TCAGACAGTTTTTATGTTCA+CGG | + | chr1_2:46284269-46284288 | Msa0073040:intron | 30.0% |
| !! | ATTCTTTACAGTTGGTAACA+AGG | - | chr1_2:46284312-46284331 | None:intergenic | 30.0% |
| TACCAACTGTAAAGAATAGA+AGG | + | chr1_2:46284315-46284334 | Msa0073040:intron | 30.0% | |
| ACCAACTGTAAAGAATAGAA+GGG | + | chr1_2:46284316-46284335 | Msa0073040:intron | 30.0% | |
| AAAACCTCAATCTCTTTAAG+AGG | - | chr1_2:46284350-46284369 | None:intergenic | 30.0% | |
| ! | CTTAAAGAGATTGAGGTTTT+AGG | + | chr1_2:46284350-46284369 | Msa0073040:intron | 30.0% |
| CAAAGCAAAATATAGCTCAA+AGG | - | chr1_2:46284398-46284417 | None:intergenic | 30.0% | |
| AATCACTAAATTGTCACTCA+TGG | + | chr1_2:46284419-46284438 | Msa0073040:intron | 30.0% | |
| ATCACTAAATTGTCACTCAT+GGG | + | chr1_2:46284420-46284439 | Msa0073040:intron | 30.0% | |
| GGATTCAAGAAAAAAGAATG+TGG | + | chr1_2:46284441-46284460 | Msa0073040:intron | 30.0% | |
| TTAACCACAGAAAAGAAATG+TGG | + | chr1_2:46284484-46284503 | Msa0073040:intron | 30.0% | |
| ! | ATAACCACATTTCTTTTCTG+TGG | - | chr1_2:46284491-46284510 | None:intergenic | 30.0% |
| !!! | ATGGAATATCTTGCTTTTTG+GGG | - | chr1_2:46284730-46284749 | None:intergenic | 30.0% |
| ATTCCCAATAGGAAATGAAA+TGG | - | chr1_2:46284749-46284768 | None:intergenic | 30.0% | |
| TGTTATAGTAGAACTAACAC+AGG | + | chr1_2:46284840-46284859 | Msa0073040:intron | 30.0% | |
| TTATTCCTACTAATGACATG+AGG | + | chr1_2:46284876-46284895 | Msa0073040:intron | 30.0% | |
| !! | CTTCTAAAGTTTGGTACATT+TGG | - | chr1_2:46284923-46284942 | None:intergenic | 30.0% |
| ! | ACTTAAAAATGGGCTTCAAA+TGG | + | chr1_2:46284998-46285017 | Msa0073040:intron | 30.0% |
| ! | TGGATGAATTTTCCTAAAGA+AGG | + | chr1_2:46285101-46285120 | Msa0073040:CDS | 30.0% |
| TGATTTAGTAAAGCAAGGAT+TGG | - | chr1_2:46285278-46285297 | None:intergenic | 30.0% | |
| TGTAGTGATTTAGTAAAGCA+AGG | - | chr1_2:46285283-46285302 | None:intergenic | 30.0% | |
| ! | GTAGGTATTGCAATTTGAAA+TGG | - | chr1_2:46285501-46285520 | None:intergenic | 30.0% |
| AATACCTACTTGACAACTTA+AGG | + | chr1_2:46285512-46285531 | Msa0073040:intron | 30.0% | |
| ACTTAAGGTGAATACAAGAA+TGG | + | chr1_2:46285527-46285546 | Msa0073040:intron | 30.0% | |
| AAGACATGTAGATTTCATGT+TGG | + | chr1_2:46285593-46285612 | Msa0073040:intron | 30.0% | |
| !!! | GTAAAGGTGTGTTTATTTTG+TGG | + | chr1_2:46286008-46286027 | Msa0073040:intron | 30.0% |
| ! | GTTCCATATTTCATTTTACC+TGG | + | chr1_2:46286109-46286128 | Msa0073040:intron | 30.0% |
| ! | AAGTATGTCATTGATAACCA+AGG | - | chr1_2:46286151-46286170 | None:intergenic | 30.0% |
| TCAATGACATACTTGCAAAA+AGG | + | chr1_2:46286157-46286176 | Msa0073040:intron | 30.0% | |
| CAATGACATACTTGCAAAAA+GGG | + | chr1_2:46286158-46286177 | Msa0073040:intron | 30.0% | |
| AATGACATACTTGCAAAAAG+GGG | + | chr1_2:46286159-46286178 | Msa0073040:intron | 30.0% | |
| CGTAACTTATGTAAGAATGA+TGG | - | chr1_2:46286299-46286318 | None:intergenic | 30.0% | |
| GAATATCATCCAAGTTAATG+AGG | - | chr1_2:46286488-46286507 | None:intergenic | 30.0% | |
| AGAACCTACATTTCAGATTA+TGG | - | chr1_2:46286702-46286721 | None:intergenic | 30.0% | |
| ! | TTCACATGATGATGATAATC+TGG | - | chr1_2:46286738-46286757 | None:intergenic | 30.0% |
| !!! | ACACTCGTTACAAAGTTTTT+TGG | + | chr1_2:46286771-46286790 | Msa0073040:CDS | 30.0% |
| TATTTCCCATTACAACAAAG+CGG | - | chr1_2:46287066-46287085 | None:intergenic | 30.0% | |
| GAATACCACTCTTAAAGATT+TGG | + | chr1_2:46287174-46287193 | Msa0073040:CDS | 30.0% | |
| ! | CAAATCCAAATCTTTAAGAG+TGG | - | chr1_2:46287182-46287201 | None:intergenic | 30.0% |
| !! | TTTGAACTACTGCTTTTACT+TGG | + | chr1_2:46287198-46287217 | Msa0073040:CDS | 30.0% |
| GGGAGTCTTTATTAAAGTAA+GGG | + | chr1_2:46287233-46287252 | Msa0073040:intron | 30.0% | |
| GGAGTCTTTATTAAAGTAAG+GGG | + | chr1_2:46287234-46287253 | Msa0073040:intron | 30.0% | |
| CTAAATTACTTTGTTGAAGG+AGG | - | chr1_2:46287349-46287368 | None:intergenic | 30.0% | |
| TAGTATAAGTTCAGATGGTT+TGG | + | chr1_2:46287908-46287927 | Msa0073040:CDS | 30.0% | |
| ! | TTGTGTGTTTTACCTAAAGT+TGG | + | chr1_2:46288029-46288048 | Msa0073040:intron | 30.0% |
| CTAAAGTTGGCATATATCAT+CGG | + | chr1_2:46288042-46288061 | Msa0073040:intron | 30.0% | |
| ! | TTTTGTGAAAAAGGTCAGAT+GGG | - | chr1_2:46288225-46288244 | None:intergenic | 30.0% |
| TAACATGAGATGGATATGAA+TGG | + | chr1_2:46288281-46288300 | Msa0073040:intron | 30.0% | |
| ATTCCTGCTTGAAAAATGTT+AGG | + | chr1_2:46288314-46288333 | Msa0073040:intron | 30.0% | |
| AACCAATCAGCATGTTTAAT+TGG | - | chr1_2:46288418-46288437 | None:intergenic | 30.0% | |
| TTTCTTCTTCTAACTGAAAC+GGG | + | chr1_2:46288512-46288531 | Msa0073040:intron | 30.0% | |
| GAAATTCTTATAGGCTTATC+CGG | + | chr1_2:46288623-46288642 | Msa0073040:intron | 30.0% | |
| TATATACTTCATCCTCTAGA+GGG | - | chr1_2:46288773-46288792 | None:intergenic | 30.0% | |
| TTATATACTTCATCCTCTAG+AGG | - | chr1_2:46288774-46288793 | None:intergenic | 30.0% | |
| GAAGTATATAACTATCCTCA+AGG | + | chr1_2:46288783-46288802 | Msa0073040:CDS | 30.0% | |
| GCTATGATCACACTAATAAT+AGG | - | chr1_2:46289013-46289032 | None:intergenic | 30.0% | |
| TTATGTTCATAAAATACGGG+CGG | + | chr1_2:46289055-46289074 | Msa0073040:intron | 30.0% | |
| TAAATATACGAGAGCTTGAA+CGG | - | chr1_2:46289230-46289249 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCATGCAGAAGTG+TGG | - | chr1_2:46289372-46289391 | None:intergenic | 30.0% |
| ! | AACAATCTAGCTATTTCACT+TGG | + | chr1_2:46289445-46289464 | Msa0073040:intron | 30.0% |
| ! | ACAATCTAGCTATTTCACTT+GGG | + | chr1_2:46289446-46289465 | Msa0073040:intron | 30.0% |
| ACTATTTAATGGTGCACTAA+AGG | - | chr1_2:46289498-46289517 | None:intergenic | 30.0% | |
| TGCTAGAATATTATAGACTG+AGG | + | chr1_2:46289518-46289537 | Msa0073040:intron | 30.0% | |
| GCTAGAATATTATAGACTGA+GGG | + | chr1_2:46289519-46289538 | Msa0073040:intron | 30.0% | |
| AAGATTACAACATGACTAAG+AGG | + | chr1_2:46289696-46289715 | Msa0073040:CDS | 30.0% | |
| AAGTTACTCAAACTTTATCC+TGG | - | chr1_2:46289839-46289858 | None:intergenic | 30.0% | |
| CAAAACGAAACGAAACTCAT+TGG | + | chr1_2:46281269-46281288 | Msa0073040:five_prime_UTR | 35.0% | |
| ! | TAAAGTCAAGTGTTGTAGGT+GGG | - | chr1_2:46281384-46281403 | None:intergenic | 35.0% |
| ! | ATAAAGTCAAGTGTTGTAGG+TGG | - | chr1_2:46281385-46281404 | None:intergenic | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+CGG | - | chr1_2:46282266-46282285 | None:intergenic | 35.0% |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr1_2:46282303-46282322 | Msa0073040:intron | 35.0% | |
| ACATCTATGAAGCACAGATA+CGG | - | chr1_2:46282364-46282383 | None:intergenic | 35.0% | |
| TGTCATATTTACAATCGGCT+TGG | + | chr1_2:46282391-46282410 | Msa0073040:intron | 35.0% | |
| !! | TATTTACAATCGGCTTGGTT+TGG | + | chr1_2:46282396-46282415 | Msa0073040:intron | 35.0% |
| CCAAAAGGACAAAGTTTCAA+GGG | + | chr1_2:46282668-46282687 | Msa0073040:five_prime_UTR | 35.0% | |
| ! | TCTAAAACCAGCAATTTCAG+TGG | - | chr1_2:46282910-46282929 | None:intergenic | 35.0% |
| !!! | GAAATTGCTGGTTTTAGAGT+AGG | + | chr1_2:46282912-46282931 | Msa0073040:CDS | 35.0% |
| !!! | AATTGCTGGTTTTAGAGTAG+GGG | + | chr1_2:46282914-46282933 | Msa0073040:CDS | 35.0% |
| TCAGATGGTTGTGTATATGA+TGG | + | chr1_2:46283017-46283036 | Msa0073040:CDS | 35.0% | |
| TTGTATGAAGGTGAATTCTC+TGG | + | chr1_2:46283098-46283117 | Msa0073040:CDS | 35.0% | |
| TGGCGATTCAATCTTAAACA+TGG | + | chr1_2:46283182-46283201 | Msa0073040:CDS | 35.0% | |
| TTCAATCTTAAACATGGCCT+AGG | + | chr1_2:46283188-46283207 | Msa0073040:CDS | 35.0% | |
| GAGATATATTTGAAGGCTCT+TGG | + | chr1_2:46283231-46283250 | Msa0073040:CDS | 35.0% | |
| GGCTAACGGAAATGTATATT+TGG | + | chr1_2:46283292-46283311 | Msa0073040:CDS | 35.0% | |
| TTTGAAGGAAGCTGGTTAAA+TGG | + | chr1_2:46283377-46283396 | Msa0073040:CDS | 35.0% | |
| TGGTTAAATGGTATGATGCA+TGG | + | chr1_2:46283389-46283408 | Msa0073040:CDS | 35.0% | |
| ! | ACAGCTTCCTTTTGGATAAA+AGG | - | chr1_2:46283492-46283511 | None:intergenic | 35.0% |
| AGATATACTTCTTGTGCAGA+TGG | - | chr1_2:46283518-46283537 | None:intergenic | 35.0% | |
| CTCAATGCATTGAGAAAAAG+AGG | + | chr1_2:46283536-46283555 | Msa0073040:CDS | 35.0% | |
| ! | TAACACTGCTTCAGTTGATA+TGG | + | chr1_2:46283601-46283620 | Msa0073040:CDS | 35.0% |
| ! | AACACTGCTTCAGTTGATAT+GGG | + | chr1_2:46283602-46283621 | Msa0073040:CDS | 35.0% |
| GATATGGGAAATGCTAGATT+TGG | + | chr1_2:46283617-46283636 | Msa0073040:CDS | 35.0% | |
| CACAGAAAACCTGTTAAATC+TGG | + | chr1_2:46283673-46283692 | Msa0073040:CDS | 35.0% | |
| GAGATTGATCCAGATTTAAC+AGG | - | chr1_2:46283685-46283704 | None:intergenic | 35.0% | |
| GCAAGAATGTTTCTCTTGAA+AGG | + | chr1_2:46283708-46283727 | Msa0073040:CDS | 35.0% | |
| AGAATGTTTCTCTTGAAAGG+CGG | + | chr1_2:46283711-46283730 | Msa0073040:CDS | 35.0% | |
| GTAGCTATTGAGAAAGTGAT+TGG | + | chr1_2:46283746-46283765 | Msa0073040:CDS | 35.0% | |
| TGATTCACAATTTGCCTCAA+CGG | + | chr1_2:46283772-46283791 | Msa0073040:CDS | 35.0% | |
| ! | TAACGAAAAGATCCCCATTT+TGG | + | chr1_2:46283826-46283845 | Msa0073040:CDS | 35.0% |
| TATATTCACGCTCCAAAATG+GGG | - | chr1_2:46283841-46283860 | None:intergenic | 35.0% | |
| CATATATTCACGCTCCAAAA+TGG | - | chr1_2:46283843-46283862 | None:intergenic | 35.0% | |
| CCCGGTGAACAAATTATTAA+AGG | + | chr1_2:46283965-46283984 | Msa0073040:CDS | 35.0% | |
| CAAGATGAATCCATGTTAGA+AGG | + | chr1_2:46284183-46284202 | Msa0073040:intron | 35.0% | |
| ATTATGACCTCCTTCTAACA+TGG | - | chr1_2:46284196-46284215 | None:intergenic | 35.0% | |
| TCCCTTCTATTCTTTACAGT+TGG | - | chr1_2:46284320-46284339 | None:intergenic | 35.0% | |
| AATGCCTCTTAAAGAGATTG+AGG | + | chr1_2:46284343-46284362 | Msa0073040:intron | 35.0% | |
| !!! | TGGAATATCTTGCTTTTTGG+GGG | - | chr1_2:46284729-46284748 | None:intergenic | 35.0% |
| ! | ATTCATCCAAAAGCTTGCTT+TGG | - | chr1_2:46285090-46285109 | None:intergenic | 35.0% |
| GTCAATTGAGAACCTTCTTT+AGG | - | chr1_2:46285116-46285135 | None:intergenic | 35.0% | |
| ! | ATCAGTCGGAGGATTTTAAA+TGG | + | chr1_2:46285144-46285163 | Msa0073040:CDS | 35.0% |
| AAACTAACCTGAACACCATA+GGG | - | chr1_2:46285181-46285200 | None:intergenic | 35.0% | |
| TAAACTAACCTGAACACCAT+AGG | - | chr1_2:46285182-46285201 | None:intergenic | 35.0% | |
| ! | TTCACCTTAAGTTGTCAAGT+AGG | - | chr1_2:46285519-46285538 | None:intergenic | 35.0% |
| CACATCACATCATACATTAG+AGG | - | chr1_2:46285643-46285662 | None:intergenic | 35.0% | |
| AATTTCTGCAAAAGGTCACA+AGG | - | chr1_2:46285833-46285852 | None:intergenic | 35.0% | |
| CTCTCTCAAATTTCTGCAAA+AGG | - | chr1_2:46285841-46285860 | None:intergenic | 35.0% | |
| ! | CAAAGCATCATTTCCACAAA+TGG | - | chr1_2:46285898-46285917 | None:intergenic | 35.0% |
| ! | TAGTGTCTTTTTCTTGTCTC+AGG | + | chr1_2:46285947-46285966 | Msa0073040:CDS | 35.0% |
| TCAGTGTCTTGATCATGAAA+CGG | - | chr1_2:46285977-46285996 | None:intergenic | 35.0% | |
| ACTGAGAAGATCAGAAGTAA+AGG | + | chr1_2:46285992-46286011 | Msa0073040:CDS | 35.0% | |
| TGATATACAAACTTCCTTGG+AGG | + | chr1_2:46286067-46286086 | Msa0073040:intron | 35.0% | |
| CACCCAGGTAAAATGAAATA+TGG | - | chr1_2:46286115-46286134 | None:intergenic | 35.0% | |
| TGCATTTCAGTTAATGAAGC+AGG | - | chr1_2:46286324-46286343 | None:intergenic | 35.0% | |
| TATTGTCTGCCTCATTAACT+TGG | + | chr1_2:46286476-46286495 | Msa0073040:intron | 35.0% | |
| ! | GTGACCATAATCTGAAATGT+AGG | + | chr1_2:46286695-46286714 | Msa0073040:intron | 35.0% |
| !!! | CAAAGTTTTTTGGTTTGCAC+AGG | + | chr1_2:46286781-46286800 | Msa0073040:CDS | 35.0% |
| ! | GATAAACGAGCATTACCTTT+TGG | - | chr1_2:46286824-46286843 | None:intergenic | 35.0% |
| ATATGTTCTGCACAGAATTG+AGG | + | chr1_2:46287083-46287102 | Msa0073040:CDS | 35.0% | |
| GATTTAAAAGGTTCATCCCT+TGG | + | chr1_2:46287121-46287140 | Msa0073040:CDS | 35.0% | |
| !! | CTCATCGATTTCTATCTTGT+CGG | - | chr1_2:46287155-46287174 | None:intergenic | 35.0% |
| CGGGAGTCTTTATTAAAGTA+AGG | + | chr1_2:46287232-46287251 | Msa0073040:intron | 35.0% | |
| TTATTCCTAGGAACACAAAG+AGG | + | chr1_2:46287308-46287327 | Msa0073040:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | - | chr1_2:46287523-46287542 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | - | chr1_2:46287522-46287541 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | + | chr1_2:46287522-46287541 | Msa0073040:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | + | chr1_2:46287523-46287542 | Msa0073040:intron | 35.0% | |
| ! | ATGGACTATAGTCTTCTTCT+AGG | + | chr1_2:46287846-46287865 | Msa0073040:CDS | 35.0% |
| TCTGAACTTATACTAACAGG+AGG | - | chr1_2:46287903-46287922 | None:intergenic | 35.0% | |
| CCATCTGAACTTATACTAAC+AGG | - | chr1_2:46287906-46287925 | None:intergenic | 35.0% | |
| CCTGTTAGTATAAGTTCAGA+TGG | + | chr1_2:46287903-46287922 | Msa0073040:CDS | 35.0% | |
| CGATGATATATGCCAACTTT+AGG | - | chr1_2:46288044-46288063 | None:intergenic | 35.0% | |
| TTTAGATGATGAGATCTACG+AGG | + | chr1_2:46288154-46288173 | Msa0073040:intron | 35.0% | |
| TTAGATGATGAGATCTACGA+GGG | + | chr1_2:46288155-46288174 | Msa0073040:intron | 35.0% | |
| ! | CTTTTGTGAAAAAGGTCAGA+TGG | - | chr1_2:46288226-46288245 | None:intergenic | 35.0% |
| AGGACCAATGTTGTAAAATC+TGG | + | chr1_2:46288347-46288366 | Msa0073040:intron | 35.0% | |
| ATGTTTAATTGGACCAGCAA+AGG | - | chr1_2:46288407-46288426 | None:intergenic | 35.0% | |
| GTCCAATTAAACATGCTGAT+TGG | + | chr1_2:46288413-46288432 | Msa0073040:intron | 35.0% | |
| ! | ACAGTGCTGCTAAGTTAAAA+GGG | - | chr1_2:46288451-46288470 | None:intergenic | 35.0% |
| GAGCTCTTGAATTGAGTATT+CGG | + | chr1_2:46288540-46288559 | Msa0073040:intron | 35.0% | |
| TCTTGAATTGAGTATTCGGT+TGG | + | chr1_2:46288544-46288563 | Msa0073040:intron | 35.0% | |
| CACACTAATAATAGGATAGC+TGG | - | chr1_2:46289005-46289024 | None:intergenic | 35.0% | |
| AGAGTAGTTTATGTTCTGCT+AGG | + | chr1_2:46289116-46289135 | Msa0073040:intron | 35.0% | |
| GAGTAGTTTATGTTCTGCTA+GGG | + | chr1_2:46289117-46289136 | Msa0073040:intron | 35.0% | |
| !! | ATTTGAGTTTCCTCTTTTCC+TGG | - | chr1_2:46289623-46289642 | None:intergenic | 35.0% |
| GCAATATATCAATGATACCC+AGG | - | chr1_2:46289676-46289695 | None:intergenic | 35.0% | |
| TGATTCGTTATCTATATCGG+CGG | + | chr1_2:46289748-46289767 | Msa0073040:CDS | 35.0% | |
| ACACTTTCTGGATAAAATCC+AGG | - | chr1_2:46289802-46289821 | None:intergenic | 35.0% | |
| TTTATCCTGGCACATTTGAT+GGG | - | chr1_2:46289826-46289845 | None:intergenic | 35.0% | |
| TAGTCAAAACCGAACCAAAC+TGG | + | chr1_2:46282489-46282508 | Msa0073040:intron | 40.0% | |
| GGGCTTCATAGACTAAAGTA+CGG | - | chr1_2:46282526-46282545 | None:intergenic | 40.0% | |
| GCCAAAAGGACAAAGTTTCA+AGG | + | chr1_2:46282667-46282686 | Msa0073040:intron | 40.0% | |
| ! | CCCTTGAAACTTTGTCCTTT+TGG | - | chr1_2:46282671-46282690 | None:intergenic | 40.0% |
| AGTTTCAAGGGTCAATCACT+TGG | + | chr1_2:46282680-46282699 | Msa0073040:five_prime_UTR | 40.0% | |
| AGACAAGAATGGTTGCAGAT+AGG | - | chr1_2:46282714-46282733 | None:intergenic | 40.0% | |
| CAACAGCTACAAGACAAGAA+TGG | - | chr1_2:46282725-46282744 | None:intergenic | 40.0% | |
| TCTTGTAGCTGTTGAGAATC+CGG | + | chr1_2:46282731-46282750 | Msa0073040:five_prime_UTR | 40.0% | |
| TCGATCCAAACTACTAACTG+TGG | - | chr1_2:46282817-46282836 | None:intergenic | 40.0% | |
| GGTAAGTATGTATGGTCAGA+TGG | + | chr1_2:46283002-46283021 | Msa0073040:CDS | 40.0% | |
| ! | GTTGTGTATATGATGGTGAG+TGG | + | chr1_2:46283024-46283043 | Msa0073040:CDS | 40.0% |
| ! | TATATGATGGTGAGTGGAGA+CGG | + | chr1_2:46283030-46283049 | Msa0073040:CDS | 40.0% |
| TATGAAGGTGAATTCTCTGG+TGG | + | chr1_2:46283101-46283120 | Msa0073040:CDS | 40.0% | |
| CAATATATGATCCTGTACCG+TGG | - | chr1_2:46283133-46283152 | None:intergenic | 40.0% | |
| CACGGTACAGGATCATATAT+TGG | + | chr1_2:46283131-46283150 | Msa0073040:CDS | 40.0% | |
| CTTTGTAGGTCAGACTTTCT+GGG | - | chr1_2:46283157-46283176 | None:intergenic | 40.0% | |
| ATATACATTTCCGTTAGCCC+AGG | - | chr1_2:46283291-46283310 | None:intergenic | 40.0% | |
| AATGGTATGATGCATGGTCT+TGG | + | chr1_2:46283395-46283414 | Msa0073040:CDS | 40.0% | |
| TTGGAGCGTGAATATATGCA+AGG | + | chr1_2:46283845-46283864 | Msa0073040:CDS | 40.0% | |
| TGGAGCGTGAATATATGCAA+GGG | + | chr1_2:46283846-46283865 | Msa0073040:CDS | 40.0% | |
| !! | GCAAGGGGTATTAATAAGTG+AGG | + | chr1_2:46283862-46283881 | Msa0073040:CDS | 40.0% |
| !! | TTAGTTTGCAGCTCGGAATA+AGG | + | chr1_2:46284011-46284030 | Msa0073040:CDS | 40.0% |
| GATGAATCCATGTTAGAAGG+AGG | + | chr1_2:46284186-46284205 | Msa0073040:intron | 40.0% | |
| !!! | TCTTGCTTTTTGGGGGAAAA+AGG | - | chr1_2:46284722-46284741 | None:intergenic | 40.0% |
| GTTGCTATGTGATTCCCAAT+AGG | - | chr1_2:46284760-46284779 | None:intergenic | 40.0% | |
| ATTGGGAATCACATAGCAAC+CGG | + | chr1_2:46284760-46284779 | Msa0073040:intron | 40.0% | |
| ! | AAAATGGGCTTCAAATGGCT+AGG | + | chr1_2:46285003-46285022 | Msa0073040:intron | 40.0% |
| TCAAATGGCTAGGTATACTG+TGG | + | chr1_2:46285013-46285032 | Msa0073040:intron | 40.0% | |
| CAAATGGCTAGGTATACTGT+GGG | + | chr1_2:46285014-46285033 | Msa0073040:intron | 40.0% | |
| TTAAAATCCTCCGACTGATG+AGG | - | chr1_2:46285143-46285162 | None:intergenic | 40.0% | |
| ATGGAAAGATTACTGCCCTA+TGG | + | chr1_2:46285163-46285182 | Msa0073040:CDS | 40.0% | |
| ATCACTACATGCCACTCTTA+TGG | + | chr1_2:46285294-46285313 | Msa0073040:intron | 40.0% | |
| TACATGCCACTCTTATGGAT+TGG | + | chr1_2:46285299-46285318 | Msa0073040:intron | 40.0% | |
| TGTCAACCAATCCATAAGAG+TGG | - | chr1_2:46285308-46285327 | None:intergenic | 40.0% | |
| AATAGACGAGAGCAAAACAG+AGG | - | chr1_2:46285774-46285793 | None:intergenic | 40.0% | |
| GACTACATGATGTCCATTTG+TGG | + | chr1_2:46285882-46285901 | Msa0073040:CDS | 40.0% | |
| ! | TCATTGATAACCAAGGACCA+TGG | - | chr1_2:46286144-46286163 | None:intergenic | 40.0% |
| ACACACACACACATATCAAG+AGG | + | chr1_2:46286418-46286437 | Msa0073040:intron | 40.0% | |
| AGGTCTTTGCAGACAGAAAT+AGG | + | chr1_2:46286438-46286457 | Msa0073040:intron | 40.0% | |
| CACAGGATTATACCTTCAAG+TGG | + | chr1_2:46286798-46286817 | Msa0073040:CDS | 40.0% | |
| TATACCTTCAAGTGGCCAAA+AGG | + | chr1_2:46286806-46286825 | Msa0073040:CDS | 40.0% | |
| ! | ATTACCTTTTGGCCACTTGA+AGG | - | chr1_2:46286813-46286832 | None:intergenic | 40.0% |
| ! | CAGTTCCGCTTTGTTGTAAT+GGG | + | chr1_2:46287058-46287077 | Msa0073040:intron | 40.0% |
| TTTCTCCTCTTTGTGTTCCT+AGG | - | chr1_2:46287316-46287335 | None:intergenic | 40.0% | |
| GATATGTATTGTACTCCCTC+CGG | + | chr1_2:46287388-46287407 | Msa0073040:intron | 40.0% | |
| !!! | GTTTTGAAGTTGAGCATTGC+AGG | - | chr1_2:46287749-46287768 | None:intergenic | 40.0% |
| ! | TGCACAAGAGTACGAGTAAA+AGG | - | chr1_2:46287782-46287801 | None:intergenic | 40.0% |
| ! | TTTTACTCGTACTCTTGTGC+AGG | + | chr1_2:46287781-46287800 | Msa0073040:intron | 40.0% |
| TAGATGATGAGATCTACGAG+GGG | + | chr1_2:46288156-46288175 | Msa0073040:intron | 40.0% | |
| !!! | GCTCCTAACATTTTTCAAGC+AGG | - | chr1_2:46288320-46288339 | None:intergenic | 40.0% |
| ! | CAGGCCAGATTTTACAACAT+TGG | - | chr1_2:46288354-46288373 | None:intergenic | 40.0% |
| CAATGTTGTAAAATCTGGCC+TGG | + | chr1_2:46288352-46288371 | Msa0073040:intron | 40.0% | |
| ! | GACAGTGCTGCTAAGTTAAA+AGG | - | chr1_2:46288452-46288471 | None:intergenic | 40.0% |
| ! | GATGATGGTAGTGTTGTTGT+CGG | + | chr1_2:46288831-46288850 | Msa0073040:CDS | 40.0% |
| ! | ATGATGGTAGTGTTGTTGTC+GGG | + | chr1_2:46288832-46288851 | Msa0073040:CDS | 40.0% |
| AAGAATTACCTTGCAGTACC+AGG | - | chr1_2:46288924-46288943 | None:intergenic | 40.0% | |
| TAAACTACTCTCCCAACAAC+TGG | - | chr1_2:46289107-46289126 | None:intergenic | 40.0% | |
| TGAACGGCAAAAATCTATGG+AGG | - | chr1_2:46289214-46289233 | None:intergenic | 40.0% | |
| GCTTGAACGGCAAAAATCTA+TGG | - | chr1_2:46289217-46289236 | None:intergenic | 40.0% | |
| CAACTAGTGTTAGGAGTTAG+AGG | - | chr1_2:46289271-46289290 | None:intergenic | 40.0% | |
| TGCAGACTTCAAATCCAGTT+AGG | + | chr1_2:46289566-46289585 | Msa0073040:intron | 40.0% | |
| TTATGACGTCGTACTATACC+TGG | + | chr1_2:46289655-46289674 | Msa0073040:CDS | 40.0% | |
| TATGACGTCGTACTATACCT+GGG | + | chr1_2:46289656-46289675 | Msa0073040:CDS | 40.0% | |
| CATTTGATGGGAACACTTTC+TGG | - | chr1_2:46289814-46289833 | None:intergenic | 40.0% | |
| CTTTATCCTGGCACATTTGA+TGG | - | chr1_2:46289827-46289846 | None:intergenic | 40.0% | |
| CAAAGCATGCATGCACAAAA+GGG | - | chr1_2:46289906-46289925 | None:intergenic | 40.0% | |
| ACAAAGCATGCATGCACAAA+AGG | - | chr1_2:46289907-46289926 | None:intergenic | 40.0% | |
| GGAAAACGAGTCGCGAAATT+TGG | + | chr1_2:46281290-46281309 | Msa0073040:five_prime_UTR | 45.0% | |
| TATGGGCGATGAAATTGAGC+TGG | + | chr1_2:46281826-46281845 | Msa0073040:intron | 45.0% | |
| !! | ATATGTGTCGGTGTCGGATA+CGG | - | chr1_2:46282260-46282279 | None:intergenic | 45.0% |
| ATGAAGCACAGATACGGACA+CGG | - | chr1_2:46282358-46282377 | None:intergenic | 45.0% | |
| TCTGTGCTTCATAGATGTCG+TGG | + | chr1_2:46282366-46282385 | Msa0073040:intron | 45.0% | |
| CTATTGCGATCAAAAGCCCA+CGG | - | chr1_2:46282466-46282485 | None:intergenic | 45.0% | |
| ACTAAAGTACGGCTGTTCGT+GGG | - | chr1_2:46282515-46282534 | None:intergenic | 45.0% | |
| CTTGTAGCTGTTGAGAATCC+GGG | + | chr1_2:46282732-46282751 | Msa0073040:five_prime_UTR | 45.0% | |
| CAAACTACTAACTGTGGCCA+CGG | - | chr1_2:46282811-46282830 | None:intergenic | 45.0% | |
| ATATTGACAAACGGCGAAGC+TGG | + | chr1_2:46282879-46282898 | Msa0073040:CDS | 45.0% | |
| GGTCATTCCACTGAAATTGC+TGG | + | chr1_2:46282900-46282919 | Msa0073040:CDS | 45.0% | |
| CCTAATGGCGAGTCATATTC+CGG | + | chr1_2:46282948-46282967 | Msa0073040:CDS | 45.0% | |
| TCATATTCCGGATCCCTTCT+CGG | + | chr1_2:46282960-46282979 | Msa0073040:CDS | 45.0% | |
| TACATACTTACCCTGACCCT+CGG | - | chr1_2:46282994-46283013 | None:intergenic | 45.0% | |
| AGGGTCAGGGTAAGTATGTA+TGG | + | chr1_2:46282994-46283013 | Msa0073040:CDS | 45.0% | |
| ! | ATATGATGGTGAGTGGAGAC+GGG | + | chr1_2:46283031-46283050 | Msa0073040:CDS | 45.0% |
| GGGAAAATACAATGGCCTTC+TGG | + | chr1_2:46283071-46283090 | Msa0073040:CDS | 45.0% | |
| CCTTCATACAACACACCAGA+AGG | - | chr1_2:46283089-46283108 | None:intergenic | 45.0% | |
| CCTTCTGGTGTGTTGTATGA+AGG | + | chr1_2:46283086-46283105 | Msa0073040:CDS | 45.0% | |
| TTCTCTGGTGGCTATATCCA+CGG | + | chr1_2:46283113-46283132 | Msa0073040:CDS | 45.0% | |
| CCTTTGTAGGTCAGACTTTC+TGG | - | chr1_2:46283158-46283177 | None:intergenic | 45.0% | |
| CCAGAAAGTCTGACCTACAA+AGG | + | chr1_2:46283155-46283174 | Msa0073040:CDS | 45.0% | |
| TTTGAAGGCTCTTGGATCCA+AGG | + | chr1_2:46283239-46283258 | Msa0073040:CDS | 45.0% | |
| TTGGATCCAAGGAAATCCTG+AGG | + | chr1_2:46283250-46283269 | Msa0073040:CDS | 45.0% | |
| TGGATCCAAGGAAATCCTGA+GGG | + | chr1_2:46283251-46283270 | Msa0073040:CDS | 45.0% | |
| ATGAAAGGTGGGACAATGTC+AGG | + | chr1_2:46283320-46283339 | Msa0073040:CDS | 45.0% | |
| GTAAGTGGAGACTCGTTTGA+AGG | + | chr1_2:46283362-46283381 | Msa0073040:CDS | 45.0% | |
| ! | ATGGTCTTGGCGCATATACT+TGG | + | chr1_2:46283408-46283427 | Msa0073040:CDS | 45.0% |
| ! | TGGTCTTGGCGCATATACTT+GGG | + | chr1_2:46283409-46283428 | Msa0073040:CDS | 45.0% |
| !! | ATGCTAGATTTGGTGAGACC+CGG | + | chr1_2:46283627-46283646 | Msa0073040:CDS | 45.0% |
| ! | AACAGGTTTTCTGTGCCAGA+CGG | - | chr1_2:46283668-46283687 | None:intergenic | 45.0% |
| ATGTTTCTCTTGAAAGGCGG+TGG | + | chr1_2:46283714-46283733 | Msa0073040:CDS | 45.0% | |
| CTTCGCCGATGGAAATAAAG+AGG | + | chr1_2:46283802-46283821 | Msa0073040:CDS | 45.0% | |
| GGAGCGTGAATATATGCAAG+GGG | + | chr1_2:46283847-46283866 | Msa0073040:CDS | 45.0% | |
| GCCAAAGATATCAAAAGGCC+CGG | + | chr1_2:46283947-46283966 | Msa0073040:CDS | 45.0% | |
| ! | ACCGGGCCTTTTGATATCTT+TGG | - | chr1_2:46283951-46283970 | None:intergenic | 45.0% |
| GCATCAGATCATAACTCCTG+TGG | - | chr1_2:46283991-46284010 | None:intergenic | 45.0% | |
| !! | CTGATGCTTAGTTTGCAGCT+CGG | + | chr1_2:46284004-46284023 | Msa0073040:CDS | 45.0% |
| GGTTGCCTCATGTCATTAGT+AGG | - | chr1_2:46284884-46284903 | None:intergenic | 45.0% | |
| AACTTCTCGTCTCTGTATGG+GGG | - | chr1_2:46285048-46285067 | None:intergenic | 45.0% | |
| GAACTTCTCGTCTCTGTATG+GGG | - | chr1_2:46285049-46285068 | None:intergenic | 45.0% | |
| CGAACTTCTCGTCTCTGTAT+GGG | - | chr1_2:46285050-46285069 | None:intergenic | 45.0% | |
| TCGAACTTCTCGTCTCTGTA+TGG | - | chr1_2:46285051-46285070 | None:intergenic | 45.0% | |
| !!! | GAAGTTCGAGCATCGGATTT+TGG | + | chr1_2:46285062-46285081 | Msa0073040:CDS | 45.0% |
| !!! | TTGGTGCCAAAGCAAGCTTT+TGG | + | chr1_2:46285081-46285100 | Msa0073040:CDS | 45.0% |
| ATTGACACCTCCTCATCAGT+CGG | + | chr1_2:46285130-46285149 | Msa0073040:CDS | 45.0% | |
| ATTACTGCCCTATGGTGTTC+AGG | + | chr1_2:46285171-46285190 | Msa0073040:CDS | 45.0% | |
| !! | ATGGATTGGTTGACAGCATC+AGG | + | chr1_2:46285313-46285332 | Msa0073040:intron | 45.0% |
| TTGAGAGAACTATCGTCTCC+AGG | + | chr1_2:46285915-46285934 | Msa0073040:CDS | 45.0% | |
| TGAGAGAACTATCGTCTCCA+GGG | + | chr1_2:46285916-46285935 | Msa0073040:CDS | 45.0% | |
| !! | AAGACACTACCACTTTTCCC+TGG | - | chr1_2:46285936-46285955 | None:intergenic | 45.0% |
| CAGTTGAAAACAAGCCTCCA+AGG | - | chr1_2:46286084-46286103 | None:intergenic | 45.0% | |
| !! | CTTGGAGGCTTGTTTTCAAC+TGG | + | chr1_2:46286082-46286101 | Msa0073040:intron | 45.0% |
| ! | TTACCTGGGTGTTTTCTCCA+TGG | + | chr1_2:46286124-46286143 | Msa0073040:intron | 45.0% |
| TGTGTGTGTGTAGGTACATC+CGG | - | chr1_2:46286367-46286386 | None:intergenic | 45.0% | |
| ! | GCAGTTCCGCTTTGTTGTAA+TGG | + | chr1_2:46287057-46287076 | Msa0073040:intron | 45.0% |
| AATAAAGACTCCCGCCAAGA+CGG | - | chr1_2:46287226-46287245 | None:intergenic | 45.0% | |
| TGAGACTGACAGCAAGTTCT+TGG | + | chr1_2:46287809-46287828 | Msa0073040:CDS | 45.0% | |
| CTTGGAGGAACAGCACATAA+TGG | + | chr1_2:46287827-46287846 | Msa0073040:CDS | 45.0% | |
| AGATGATGAGATCTACGAGG+GGG | + | chr1_2:46288157-46288176 | Msa0073040:intron | 45.0% | |
| TGTAAAATCTGGCCTGGACT+TGG | + | chr1_2:46288358-46288377 | Msa0073040:intron | 45.0% | |
| ! | AAAGGACCTGGCTATCCTTT+TGG | - | chr1_2:46288389-46288408 | None:intergenic | 45.0% |
| ATCAACTACAGACCCTCTAG+AGG | + | chr1_2:46288758-46288777 | Msa0073040:intron | 45.0% | |
| !! | CTATCCTCAAGGTCTTGTTC+TGG | + | chr1_2:46288794-46288813 | Msa0073040:CDS | 45.0% |
| TTCTTCTACCTGGTACTGCA+AGG | + | chr1_2:46288913-46288932 | Msa0073040:CDS | 45.0% | |
| TGGTGCAATACTCCAGTTGT+TGG | + | chr1_2:46289092-46289111 | Msa0073040:intron | 45.0% | |
| GGTGCAATACTCCAGTTGTT+GGG | + | chr1_2:46289093-46289112 | Msa0073040:intron | 45.0% | |
| GTGTTAGGAGTTAGAGGATG+TGG | - | chr1_2:46289265-46289284 | None:intergenic | 45.0% | |
| ! | GTAGGAGTGCAACTAGTGTT+AGG | - | chr1_2:46289280-46289299 | None:intergenic | 45.0% |
| ! | CAGAAGTGTGGTGCAATCAT+TGG | - | chr1_2:46289360-46289379 | None:intergenic | 45.0% |
| AGAGCAGATACCAGGAAAAG+AGG | + | chr1_2:46289610-46289629 | Msa0073040:CDS | 45.0% | |
| GGAAACTCAAATGTTCCACG+AGG | + | chr1_2:46289631-46289650 | Msa0073040:CDS | 45.0% | |
| TTCGTTATCTATATCGGCGG+TGG | + | chr1_2:46289751-46289770 | Msa0073040:CDS | 45.0% | |
| AAGCGACGAGAGTAGAATGT+AGG | - | chr1_2:46289779-46289798 | None:intergenic | 45.0% | |
| ! | CTCAACGCTCTTTTGCTTGC+TGG | - | chr1_2:46281346-46281365 | None:intergenic | 50.0% |
| TCGGTGTGTCAGTGTTTGTG+TGG | + | chr1_2:46282322-46282341 | Msa0073040:intron | 50.0% | |
| ACAGATACGGACACGGACAT+CGG | - | chr1_2:46282351-46282370 | None:intergenic | 50.0% | |
| GACTAAAGTACGGCTGTTCG+TGG | - | chr1_2:46282516-46282535 | None:intergenic | 50.0% | |
| ! | ATTATGCATGTCTGGCTCCG+TGG | + | chr1_2:46282791-46282810 | Msa0073040:exon | 50.0% |
| CGTGGCCACAGTTAGTAGTT+TGG | + | chr1_2:46282809-46282828 | Msa0073040:CDS | 50.0% | |
| GGGGAACTCTCTCTTCCTAA+TGG | + | chr1_2:46282933-46282952 | Msa0073040:CDS | 50.0% | |
| CCGGAATATGACTCGCCATT+AGG | - | chr1_2:46282951-46282970 | None:intergenic | 50.0% | |
| ACATACTTACCCTGACCCTC+GGG | - | chr1_2:46282993-46283012 | None:intergenic | 50.0% | |
| ! | TATGATGGTGAGTGGAGACG+GGG | + | chr1_2:46283032-46283051 | Msa0073040:CDS | 50.0% |
| ! | GGGGGATGAGGAATGGATTT+GGG | + | chr1_2:46283051-46283070 | Msa0073040:CDS | 50.0% |
| GTCTGACCTACAAAGGTCGA+TGG | + | chr1_2:46283162-46283181 | Msa0073040:CDS | 50.0% | |
| GAATCGCCATCGACCTTTGT+AGG | - | chr1_2:46283171-46283190 | None:intergenic | 50.0% | |
| GGATCCAAGGAAATCCTGAG+GGG | + | chr1_2:46283252-46283271 | Msa0073040:CDS | 50.0% | |
| TTAGCCCAGGTATACTTGCC+TGG | - | chr1_2:46283278-46283297 | None:intergenic | 50.0% | |
| GGCAAGTATACCTGGGCTAA+CGG | + | chr1_2:46283278-46283297 | Msa0073040:CDS | 50.0% | |
| AGGCAAAGGAACCCTTACCT+GGG | + | chr1_2:46283340-46283359 | Msa0073040:CDS | 50.0% | |
| GTCTCCACTTACCCAGGTAA+GGG | - | chr1_2:46283354-46283373 | None:intergenic | 50.0% | |
| AGTCTCCACTTACCCAGGTA+AGG | - | chr1_2:46283355-46283374 | None:intergenic | 50.0% | |
| AAACGAGTCTCCACTTACCC+AGG | - | chr1_2:46283360-46283379 | None:intergenic | 50.0% | |
| GAGACTCGTTTGAAGGAAGC+TGG | + | chr1_2:46283369-46283388 | Msa0073040:CDS | 50.0% | |
| GGTCTTGGCGCATATACTTG+GGG | + | chr1_2:46283410-46283429 | Msa0073040:CDS | 50.0% | |
| GCGCATATACTTGGGGTGAT+GGG | + | chr1_2:46283417-46283436 | Msa0073040:CDS | 50.0% | |
| CGCATATACTTGGGGTGATG+GGG | + | chr1_2:46283418-46283437 | Msa0073040:CDS | 50.0% | |
| ! | GCATATACTTGGGGTGATGG+GGG | + | chr1_2:46283419-46283438 | Msa0073040:CDS | 50.0% |
| !! | CATATACTTGGGGTGATGGG+GGG | + | chr1_2:46283420-46283439 | Msa0073040:CDS | 50.0% |
| GCTATGTTGGGACATGGACA+CGG | + | chr1_2:46283444-46283463 | Msa0073040:CDS | 50.0% | |
| CTATGTTGGGACATGGACAC+GGG | + | chr1_2:46283445-46283464 | Msa0073040:CDS | 50.0% | |
| TATGTTGGGACATGGACACG+GGG | + | chr1_2:46283446-46283465 | Msa0073040:CDS | 50.0% | |
| TGGACACGGGGTCTTAAAGA+TGG | + | chr1_2:46283458-46283477 | Msa0073040:CDS | 50.0% | |
| CGGGGTCTTAAAGATGGCAA+AGG | + | chr1_2:46283464-46283483 | Msa0073040:CDS | 50.0% | |
| ! | GATGGCAGACAGCTTCCTTT+TGG | - | chr1_2:46283500-46283519 | None:intergenic | 50.0% |
| TGAAAGGCGGTGGAGTTTAG+AGG | + | chr1_2:46283724-46283743 | Msa0073040:CDS | 50.0% | |
| GCTTAAGGCAACGCATCTTC+CGG | - | chr1_2:46284782-46284801 | None:intergenic | 50.0% | |
| GAGACGAGAAGTTCGAGCAT+CGG | + | chr1_2:46285055-46285074 | Msa0073040:CDS | 50.0% | |
| AAATCCTCCGACTGATGAGG+AGG | - | chr1_2:46285140-46285159 | None:intergenic | 50.0% | |
| !! | GCCTCATTCATCGACTCAGT+AGG | + | chr1_2:46285239-46285258 | Msa0073040:intron | 50.0% |
| GCCTACTGAGTCGATGAATG+AGG | - | chr1_2:46285243-46285262 | None:intergenic | 50.0% | |
| CTATCGTCTCCAGGGAAAAG+TGG | + | chr1_2:46285924-46285943 | Msa0073040:CDS | 50.0% | |
| ! | GGTGTTTTCTCCATGGTCCT+TGG | + | chr1_2:46286131-46286150 | Msa0073040:intron | 50.0% |
| GTGTGTGTGTGTGTGTGTGT+AGG | - | chr1_2:46286376-46286395 | None:intergenic | 50.0% | |
| CTTGTCGGAAGAACGTCCAA+GGG | - | chr1_2:46287140-46287159 | None:intergenic | 50.0% | |
| TCTTGTCGGAAGAACGTCCA+AGG | - | chr1_2:46287141-46287160 | None:intergenic | 50.0% | |
| ! | GCTTTTACTTGGAGCCGTCT+TGG | + | chr1_2:46287209-46287228 | Msa0073040:CDS | 50.0% |
| TTTACTTGGAGCCGTCTTGG+CGG | + | chr1_2:46287212-46287231 | Msa0073040:CDS | 50.0% | |
| GACTGACAGCAAGTTCTTGG+AGG | + | chr1_2:46287812-46287831 | Msa0073040:CDS | 50.0% | |
| ! | TGGTTTGGCAATGCTTGCAG+AGG | + | chr1_2:46287923-46287942 | Msa0073040:CDS | 50.0% |
| TTGGCAATGCTTGCAGAGGA+AGG | + | chr1_2:46287927-46287946 | Msa0073040:CDS | 50.0% | |
| AAATCTGGCCTGGACTTGGA+TGG | + | chr1_2:46288362-46288381 | Msa0073040:intron | 50.0% | |
| ! | CTTTTGGACCATCCAAGTCC+AGG | - | chr1_2:46288373-46288392 | None:intergenic | 50.0% |
| CTGGACTTGGATGGTCCAAA+AGG | + | chr1_2:46288371-46288390 | Msa0073040:intron | 50.0% | |
| GATGGTCCAAAAGGATAGCC+AGG | + | chr1_2:46288380-46288399 | Msa0073040:intron | 50.0% | |
| AATTGGACCAGCAAAGGACC+TGG | - | chr1_2:46288401-46288420 | None:intergenic | 50.0% | |
| !! | AAGGTCTTGTTCTGGTCCCT+CGG | + | chr1_2:46288802-46288821 | Msa0073040:CDS | 50.0% |
| GTTGTCGGGTCACACATTAG+AGG | + | chr1_2:46288846-46288865 | Msa0073040:CDS | 50.0% | |
| GAGGTGGATCTTCTTCTACC+TGG | + | chr1_2:46288903-46288922 | Msa0073040:CDS | 50.0% | |
| ! | AAAATACGGGCGGCTGTTTC+TGG | + | chr1_2:46289065-46289084 | Msa0073040:intron | 50.0% |
| CTGGCATGTTCACACCTAAC+TGG | - | chr1_2:46289583-46289602 | None:intergenic | 50.0% | |
| TAGGTGTGAACATGCCAGCA+AGG | + | chr1_2:46289585-46289604 | Msa0073040:CDS | 50.0% | |
| AGGTGTGAACATGCCAGCAA+GGG | + | chr1_2:46289586-46289605 | Msa0073040:CDS | 50.0% | |
| ATTCTACTCTCGTCGCTTCC+TGG | + | chr1_2:46289781-46289800 | Msa0073040:CDS | 50.0% | |
| GTGTTCCCATCAAATGTGCC+AGG | + | chr1_2:46289818-46289837 | Msa0073040:CDS | 50.0% | |
| ! | AAAAGCCCACGGCTTGGGTT+GGG | - | chr1_2:46282455-46282474 | None:intergenic | 55.0% |
| CGATCAAAAGCCCACGGCTT+GGG | - | chr1_2:46282460-46282479 | None:intergenic | 55.0% | |
| GTTCGTGGGCCAGTTTGGTT+CGG | - | chr1_2:46282501-46282520 | None:intergenic | 55.0% | |
| AACGTTGCCGAGAAGGGATC+CGG | - | chr1_2:46282970-46282989 | None:intergenic | 55.0% | |
| ! | ATGATGGTGAGTGGAGACGG+GGG | + | chr1_2:46283033-46283052 | Msa0073040:CDS | 55.0% |
| ! | CGGGGGATGAGGAATGGATT+TGG | + | chr1_2:46283050-46283069 | Msa0073040:CDS | 55.0% |
| GGTGGCTATATCCACGGTAC+AGG | + | chr1_2:46283119-46283138 | Msa0073040:CDS | 55.0% | |
| GGTGGGACAATGTCAGGCAA+AGG | + | chr1_2:46283326-46283345 | Msa0073040:CDS | 55.0% | |
| CAGGCAAAGGAACCCTTACC+TGG | + | chr1_2:46283339-46283358 | Msa0073040:CDS | 55.0% | |
| GGAACCCTTACCTGGGTAAG+TGG | + | chr1_2:46283347-46283366 | Msa0073040:CDS | 55.0% | |
| GGCGCATATACTTGGGGTGA+TGG | + | chr1_2:46283416-46283435 | Msa0073040:CDS | 55.0% | |
| !! | GTGATGGGGGGTGCTATGTT+GGG | + | chr1_2:46283432-46283451 | Msa0073040:CDS | 55.0% |
| TTTGGTGAGACCCGGAGAAC+AGG | + | chr1_2:46283635-46283654 | Msa0073040:CDS | 55.0% | |
| ACGGAACACCACCTGTTCTC+CGG | - | chr1_2:46283649-46283668 | None:intergenic | 55.0% | |
| AGAACAGGTGGTGTTCCGTC+TGG | + | chr1_2:46283650-46283669 | Msa0073040:CDS | 55.0% | |
| GGCGAAGACTGAATCCGTTG+AGG | - | chr1_2:46283789-46283808 | None:intergenic | 55.0% | |
| ACGGATTCAGTCTTCGCCGA+TGG | + | chr1_2:46283791-46283810 | Msa0073040:CDS | 55.0% | |
| GGACCATGGAGAAAACACCC+AGG | - | chr1_2:46286130-46286149 | None:intergenic | 55.0% | |
| TTACTTGGAGCCGTCTTGGC+GGG | + | chr1_2:46287213-46287232 | Msa0073040:CDS | 55.0% | |
| AGGATAGCCAGGTCCTTTGC+TGG | + | chr1_2:46288391-46288410 | Msa0073040:intron | 55.0% | |
| GGGACCAGAACAAGACCTTG+AGG | - | chr1_2:46288801-46288820 | None:intergenic | 55.0% | |
| !! | AGGTCTTGTTCTGGTCCCTC+GGG | + | chr1_2:46288803-46288822 | Msa0073040:CDS | 55.0% |
| TACCATCATCTGCTCCCCGA+GGG | - | chr1_2:46288821-46288840 | None:intergenic | 55.0% | |
| CAGCAGCTGAAGCTCGCAAT+CGG | - | chr1_2:46288875-46288894 | None:intergenic | 55.0% | |
| GTACGACGTCATAAGCCTCG+TGG | - | chr1_2:46289649-46289668 | None:intergenic | 55.0% | |
| ATCCAACCCAACCCAAGCCG+TGG | + | chr1_2:46282446-46282465 | Msa0073040:intron | 60.0% | |
| TCCAACCCAACCCAAGCCGT+GGG | + | chr1_2:46282447-46282466 | Msa0073040:intron | 60.0% | |
| ! | CAAAAGCCCACGGCTTGGGT+TGG | - | chr1_2:46282456-46282475 | None:intergenic | 60.0% |
| GCGATCAAAAGCCCACGGCT+TGG | - | chr1_2:46282461-46282480 | None:intergenic | 60.0% | |
| CTCGGGAACGTTGCCGAGAA+GGG | - | chr1_2:46282976-46282995 | None:intergenic | 60.0% | |
| CTTCTCGGCAACGTTCCCGA+GGG | + | chr1_2:46282975-46282994 | Msa0073040:CDS | 60.0% | |
| TGGAGACGGGGGATGAGGAA+TGG | + | chr1_2:46283044-46283063 | Msa0073040:CDS | 60.0% | |
| CTGGCCCCTCAGGATTTCCT+TGG | - | chr1_2:46283259-46283278 | None:intergenic | 60.0% | |
| CAAGGAAATCCTGAGGGGCC+AGG | + | chr1_2:46283257-46283276 | Msa0073040:CDS | 60.0% | |
| GTATACTTGCCTGGCCCCTC+AGG | - | chr1_2:46283269-46283288 | None:intergenic | 60.0% | |
| AGGGGCCAGGCAAGTATACC+TGG | + | chr1_2:46283270-46283289 | Msa0073040:CDS | 60.0% | |
| GGGGCCAGGCAAGTATACCT+GGG | + | chr1_2:46283271-46283290 | Msa0073040:CDS | 60.0% | |
| !! | GGTGATGGGGGGTGCTATGT+TGG | + | chr1_2:46283431-46283450 | Msa0073040:CDS | 60.0% |
| !! | GGGGGTGCTATGTTGGGACA+TGG | + | chr1_2:46283438-46283457 | Msa0073040:CDS | 60.0% |
| CGGAACACCACCTGTTCTCC+GGG | - | chr1_2:46283648-46283667 | None:intergenic | 60.0% | |
| GACACCTCCTCATCAGTCGG+AGG | + | chr1_2:46285133-46285152 | Msa0073040:CDS | 60.0% | |
| AACAGGAGGACGCAGCTGCT+GGG | - | chr1_2:46287889-46287908 | None:intergenic | 60.0% | |
| TAACAGGAGGACGCAGCTGC+TGG | - | chr1_2:46287890-46287909 | None:intergenic | 60.0% | |
| !! | GGTCTTGTTCTGGTCCCTCG+GGG | + | chr1_2:46288804-46288823 | Msa0073040:CDS | 60.0% |
| CTACCATCATCTGCTCCCCG+AGG | - | chr1_2:46288822-46288841 | None:intergenic | 60.0% | |
| CGATTGCGAGCTTCAGCTGC+TGG | + | chr1_2:46288873-46288892 | Msa0073040:CDS | 60.0% | |
| ! | AGCTTCAGCTGCTGGTGACG+AGG | + | chr1_2:46288881-46288900 | Msa0073040:CDS | 60.0% |
| ! | TTCAGCTGCTGGTGACGAGG+AGG | + | chr1_2:46288884-46288903 | Msa0073040:CDS | 60.0% |
| GGTATCTGCTCTGCCCTTGC+TGG | - | chr1_2:46289602-46289621 | None:intergenic | 60.0% | |
| GCAAGGGCAGAGCAGATACC+AGG | + | chr1_2:46289602-46289621 | Msa0073040:CDS | 60.0% | |
| CGGCTGTTCGTGGGCCAGTT+TGG | - | chr1_2:46282506-46282525 | None:intergenic | 65.0% | |
| CCTCGGGAACGTTGCCGAGA+AGG | - | chr1_2:46282977-46282996 | None:intergenic | 65.0% | |
| CCTTCTCGGCAACGTTCCCG+AGG | + | chr1_2:46282974-46282993 | Msa0073040:CDS | 65.0% | |
| GGCAACGTTCCCGAGGGTCA+GGG | + | chr1_2:46282981-46283000 | Msa0073040:CDS | 65.0% | |
| GTGAGTGGAGACGGGGGATG+AGG | + | chr1_2:46283039-46283058 | Msa0073040:CDS | 65.0% | |
| GGTGAGACCCGGAGAACAGG+TGG | + | chr1_2:46283638-46283657 | Msa0073040:CDS | 65.0% | |
| ACAGGAGGACGCAGCTGCTG+GGG | - | chr1_2:46287888-46287907 | None:intergenic | 65.0% | |
| GTCCCTCGGGGAGCAGATGA+TGG | + | chr1_2:46288816-46288835 | Msa0073040:CDS | 65.0% | |
| ! | AGCTGCTGGTGACGAGGAGG+TGG | + | chr1_2:46288887-46288906 | Msa0073040:CDS | 65.0% |
| !! | GGGCGGCTGTTTCTGGCATC+TGG | + | chr1_2:46289072-46289091 | Msa0073040:intron | 65.0% |
| !! | GCCCACGGCTTGGGTTGGGT+TGG | - | chr1_2:46282451-46282470 | None:intergenic | 70.0% |
| CGGCAACGTTCCCGAGGGTC+AGG | + | chr1_2:46282980-46282999 | Msa0073040:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 46281190 | 46290037 | 46281190 | ID=Msa0073040;Name=Msa0073040 |
| chr1_2 | mRNA | 46281190 | 46290037 | 46281190 | ID=Msa0073040-mRNA-1;Parent=Msa0073040;Name=Msa0073040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=375|1|1|1|0.87|0.77|9|193|817 |
| chr1_2 | exon | 46281190 | 46281434 | 46281190 | ID=Msa0073040-mRNA-1:exon:14076;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46282668 | 46284032 | 46282668 | ID=Msa0073040-mRNA-1:exon:14077;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46285025 | 46285192 | 46285025 | ID=Msa0073040-mRNA-1:exon:14078;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46285848 | 46286013 | 46285848 | ID=Msa0073040-mRNA-1:exon:14079;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46286717 | 46286827 | 46286717 | ID=Msa0073040-mRNA-1:exon:14080;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46287061 | 46287248 | 46287061 | ID=Msa0073040-mRNA-1:exon:14081;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46287803 | 46287948 | 46287803 | ID=Msa0073040-mRNA-1:exon:14082;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46288769 | 46288934 | 46288769 | ID=Msa0073040-mRNA-1:exon:14083;Parent=Msa0073040-mRNA-1 |
| chr1_2 | exon | 46289571 | 46290037 | 46289571 | ID=Msa0073040-mRNA-1:exon:14084;Parent=Msa0073040-mRNA-1 |
| chr1_2 | five_prime_UTR | 46281190 | 46281434 | 46281190 | ID=Msa0073040-mRNA-1:five_prime_utr;Parent=Msa0073040-mRNA-1 |
| chr1_2 | five_prime_UTR | 46282668 | 46282797 | 46282668 | ID=Msa0073040-mRNA-1:five_prime_utr;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46282798 | 46284032 | 46282798 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46285025 | 46285192 | 46285025 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46285848 | 46286013 | 46285848 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46286717 | 46286827 | 46286717 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46287061 | 46287248 | 46287061 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46287803 | 46287948 | 46287803 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46288769 | 46288934 | 46288769 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | CDS | 46289571 | 46289844 | 46289571 | ID=Msa0073040-mRNA-1:cds;Parent=Msa0073040-mRNA-1 |
| chr1_2 | three_prime_UTR | 46289845 | 46290037 | 46289845 | ID=Msa0073040-mRNA-1:three_prime_utr;Parent=Msa0073040-mRNA-1 |
| Gene Sequence |
| Protein sequence |