AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031010 MtrunA17_Chr1g0188881 86.504 452 36 5 362 788 3 454 0.0 785
Msa0031010 MtrunA17_Chr1g0188881 65.756 476 57 6 4 374 10 484 0.0 585
Msa0031010 MtrunA17_Chr1g0188871 75.053 473 19 4 1 374 1 473 0.0 681
Msa0031010 MtrunA17_Chr1g0188871 76.606 436 76 6 374 788 12 442 0.0 662
Msa0031010 MtrunA17_Chr7g0267471 43.970 398 187 5 408 784 42 424 8.20e-102 322
Msa0031010 MtrunA17_Chr7g0267471 38.005 421 182 9 41 383 51 470 1.20e-65 226
Msa0031010 MtrunA17_Chr2g0321971 42.040 402 200 8 408 788 37 426 1.09e-93 300
Msa0031010 MtrunA17_Chr2g0321971 35.696 381 167 5 41 343 46 426 9.87e-64 220
Msa0031010 MtrunA17_Chr4g0025591 40.199 403 193 6 408 782 41 423 5.11e-90 291
Msa0031010 MtrunA17_Chr4g0025591 36.785 367 148 6 46 335 55 414 2.87e-61 214
Msa0031010 MtrunA17_Chr2g0321961 36.842 418 219 7 397 782 15 419 9.93e-75 250
Msa0031010 MtrunA17_Chr2g0321961 32.713 376 176 7 41 339 46 421 1.38e-45 169
Msa0031010 MtrunA17_Chr1g0212201 36.020 397 206 9 391 743 20 412 2.69e-74 251
Msa0031010 MtrunA17_Chr1g0212201 34.125 337 152 7 25 292 16 351 1.74e-52 191
Msa0031010 MtrunA17_Chr1g0212291 38.483 356 185 8 398 723 27 378 5.13e-73 248
Msa0031010 MtrunA17_Chr1g0212291 35.099 302 146 4 41 292 47 348 1.36e-42 163
Msa0031010 MtrunA17_Chr1g0212251 37.931 348 184 7 404 723 33 376 4.74e-71 242
Msa0031010 MtrunA17_Chr1g0212251 35.762 302 143 5 41 292 46 346 8.21e-51 186
Msa0031010 MtrunA17_Chr4g0054741 32.112 464 235 9 400 783 41 504 4.50e-64 223
Msa0031010 MtrunA17_Chr4g0054741 33.038 339 175 4 4 292 23 359 3.90e-44 167
Msa0031010 MtrunA17_Chr7g0259731 34.250 400 218 9 412 784 60 441 7.24e-63 218
Msa0031010 MtrunA17_Chr7g0259731 30.997 371 178 8 46 338 70 440 8.90e-40 152
Msa0031010 MtrunA17_Chr6g0484691 32.632 380 220 8 375 719 48 426 2.10e-50 187
Msa0031010 MtrunA17_Chr6g0484691 26.724 348 182 6 24 298 59 406 5.83e-32 132
Msa0031010 MtrunA17_Chr8g0390931 34.226 336 196 8 405 718 56 388 2.90e-48 180
Msa0031010 MtrunA17_Chr8g0390931 32.000 300 158 4 44 298 71 369 2.56e-41 159
Msa0031010 MtrunA17_Chr5g0400471 33.974 312 164 5 454 723 3 314 8.26e-46 171
Msa0031010 MtrunA17_Chr5g0400471 27.854 219 106 4 126 292 66 284 5.80e-21 97.1
Msa0031010 MtrunA17_Chr1g0210101 29.805 359 220 7 399 729 104 458 3.32e-45 171
Msa0031010 MtrunA17_Chr1g0210101 29.032 310 163 5 44 298 125 432 8.88e-33 134
Msa0031010 MtrunA17_Chr8g0390921 31.868 364 209 9 398 724 46 407 2.42e-44 169
Msa0031010 MtrunA17_Chr8g0390921 26.786 336 173 7 34 298 47 380 8.19e-31 128
Msa0031010 MtrunA17_Chr4g0054771 29.944 354 178 5 500 783 3 356 1.33e-41 156
Msa0031010 MtrunA17_Chr4g0054771 31.088 193 107 2 126 292 19 211 7.06e-25 107
Msa0031010 MtrunA17_Chr8g0390901 32.770 296 173 7 453 724 10 303 2.27e-41 158
Msa0031010 MtrunA17_Chr8g0390901 27.138 269 139 4 86 298 9 276 1.17e-23 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031010 AT4G00910.1 48.000 425 186 7 398 788 48 471 1.92e-132 403
Msa0031010 AT4G00910.1 37.844 473 167 10 5 352 8 478 9.27e-90 291
Msa0031010 AT3G11680.1 40.179 448 216 7 362 786 4 422 3.80e-95 306
Msa0031010 AT3G11680.1 34.223 412 180 7 18 338 8 419 4.67e-53 192
Msa0031010 AT3G11680.2 40.449 445 213 7 362 783 6 421 4.12e-95 306
Msa0031010 AT3G11680.2 34.223 412 180 7 18 338 10 421 4.72e-53 192
Msa0031010 AT1G08440.1 40.342 409 203 6 398 780 3 396 1.70e-94 304
Msa0031010 AT1G08440.1 36.000 375 160 5 41 335 22 396 1.80e-63 221
Msa0031010 AT1G08430.1 38.443 424 217 7 398 792 3 411 1.16e-89 291
Msa0031010 AT1G08430.1 33.496 409 186 7 43 365 24 432 2.28e-61 215
Msa0031010 AT2G27240.2 37.470 411 224 5 398 786 3 402 3.11e-89 290
Msa0031010 AT2G27240.2 34.656 378 167 5 41 338 22 399 4.26e-61 214
Msa0031010 AT2G27240.1 35.469 437 223 5 398 786 3 428 2.62e-86 283
Msa0031010 AT2G27240.1 32.673 404 166 5 41 338 22 425 4.18e-58 206
Msa0031010 AT4G17970.1 36.438 365 204 5 398 734 29 393 4.58e-73 249
Msa0031010 AT4G17970.1 32.886 298 153 3 41 291 48 345 5.19e-49 182
Msa0031010 AT5G46600.1 36.441 354 197 6 398 723 32 385 2.38e-70 241
Msa0031010 AT5G46600.1 32.237 304 153 4 41 291 51 354 3.66e-48 179
Msa0031010 AT5G46610.1 33.947 380 220 6 369 723 8 381 2.04e-68 236
Msa0031010 AT5G46610.1 32.450 302 154 3 41 292 50 351 8.54e-45 170
Msa0031010 AT5G46610.2 32.162 370 216 6 369 723 8 357 1.44e-60 214
Msa0031010 AT5G46610.2 29.930 284 161 4 41 292 50 327 5.74e-36 143
Msa0031010 AT5G46610.3 30.811 370 198 7 369 723 8 334 7.19e-53 192
Msa0031010 AT5G46610.3 31.295 278 142 5 41 292 50 304 2.91e-36 144
Msa0031010 AT3G18440.1 32.552 384 217 11 380 724 46 426 9.17e-52 191
Msa0031010 AT3G18440.1 30.588 340 162 9 30 298 63 399 1.47e-36 146
Msa0031010 AT1G18420.1 32.398 392 222 11 386 739 58 444 2.51e-49 184
Msa0031010 AT1G18420.1 27.249 389 203 7 19 334 52 433 1.52e-34 140
Msa0031010 AT1G18420.2 31.967 366 209 10 409 739 1 361 3.23e-46 173
Msa0031010 AT1G18420.2 29.870 308 161 4 46 298 14 321 1.02e-34 139
Msa0031010 AT2G17470.1 32.378 349 203 9 408 725 31 377 4.04e-45 171
Msa0031010 AT2G17470.1 29.355 310 163 6 44 298 43 351 2.08e-34 139
Msa0031010 AT2G17470.2 32.378 349 203 9 408 725 53 399 6.97e-45 170
Msa0031010 AT2G17470.2 29.355 310 163 6 44 298 65 373 2.20e-34 139
Msa0031010 AT1G68600.1 32.722 327 190 8 405 703 45 369 5.39e-43 164
Msa0031010 AT1G68600.1 30.195 308 159 5 46 298 62 368 2.57e-33 135
Msa0031010 AT1G25480.1 32.386 352 205 9 405 725 56 405 1.53e-42 163
Msa0031010 AT1G25480.1 29.870 308 160 6 46 298 73 379 2.89e-33 135

Find 141 sgRNAs with CRISPR-Local

Find 604 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCATTGATGCTCTTAT+TGG 0.158685 1_1:+57572550 Msa0031010:CDS
ACTTGAATTACTTCCATTAT+TGG 0.173527 1_1:-57578266 None:intergenic
ACTTGAATTAATTCTATTAT+TGG 0.173844 1_1:-57572988 None:intergenic
AGAATTTCCACTATTATAAT+TGG 0.174482 1_1:+57571927 Msa0031010:CDS
TTCAGTTTGGTTTCAATATC+TGG 0.191656 1_1:+57577167 Msa0031010:CDS
AAAATTCATCCATTGTTTAA+AGG 0.225366 1_1:+57576164 Msa0031010:CDS
AGGATTTCTACTATTATAAT+TGG 0.227233 1_1:+57577227 Msa0031010:CDS
GAGCAGGACTCCAACAATTA+TGG 0.249770 1_1:-57576941 None:intergenic
GGCAAGTTTGTCGAGGTTTC+CGG 0.250712 1_1:-57577324 None:intergenic
TGGAAGCAATATCTTAAAAT+TGG 0.256872 1_1:+57577774 Msa0031010:CDS
TGGAAGCAATATCTTAAAAT+TGG 0.274268 1_1:+57572505 Msa0031010:intron
TTGTCACATTTAGACATTTC+AGG 0.274679 1_1:-57573105 None:intergenic
CGACAAACTTGCCAACTCTT+TGG 0.277455 1_1:+57577334 Msa0031010:CDS
GCATGACTGTTCGCCCTGTT+TGG 0.280306 1_1:+57571973 Msa0031010:CDS
GCATGATTATTCGACCTGTT+TGG 0.287777 1_1:+57577273 Msa0031010:CDS
CAATGATTCTTCTGTTGCTT+TGG 0.297791 1_1:-57572291 None:intergenic
CTTCCAACACCATCATATAA+AGG 0.302727 1_1:-57570862 None:intergenic
AATTGATGAATTGTTTGATA+TGG 0.306438 1_1:+57577196 Msa0031010:CDS
CTTGAATTACTTCCATTATT+GGG 0.307049 1_1:-57578265 None:intergenic
CATGATTATTCGACCTGTTT+GGG 0.318706 1_1:+57577274 Msa0031010:CDS
CATTGATACTTCTGTTGCTT+TGG 0.318862 1_1:-57577596 None:intergenic
CTTGAATTAATTCTATTATT+GGG 0.328345 1_1:-57572987 None:intergenic
GTTAGACTCACTTGCTGCTT+GGG 0.330664 1_1:-57572234 None:intergenic
TCATGTATTGATGCTCTTGT+TGG 0.334317 1_1:+57577819 Msa0031010:CDS
AATTGATGAATTGTTTGATT+TGG 0.335580 1_1:+57571896 Msa0031010:CDS
GTTGTCTGTTGAATGTTGTT+TGG 0.338958 1_1:-57573130 None:intergenic
TTCAGTTTGGTTTCAATATC+CGG 0.352067 1_1:+57571867 Msa0031010:CDS
TTGAAACCAAACTGAAAGTT+AGG 0.352951 1_1:-57577160 None:intergenic
ATTTCATTATTCTAGGAGTA+AGG 0.354513 1_1:+57576342 Msa0031010:intron
ATTTATCCTCACTTTCAGTT+TGG 0.369853 1_1:+57571854 Msa0031010:CDS
TTCTAGCCTTTGGTGTACAT+TGG 0.372115 1_1:+57571170 Msa0031010:CDS
TCTAGCCTTTGGTGTACATT+GGG 0.373912 1_1:+57571171 Msa0031010:CDS
ATTTATCCTAACTTTCAGTT+TGG 0.375111 1_1:+57577154 Msa0031010:CDS
CATGACTGTTCGCCCTGTTT+GGG 0.375451 1_1:+57571974 Msa0031010:CDS
CTTGCCGGGCTTCTAGCCTT+TGG 0.375772 1_1:+57571160 Msa0031010:CDS
ATATGTGGAACTACCCTTGC+CGG 0.376919 1_1:+57571145 Msa0031010:CDS
TCCTCATCATTCTGTTGGTC+TGG 0.378128 1_1:-57573162 None:intergenic
CTTGCCGGATTTCTAGCCTT+TGG 0.385282 1_1:+57576877 Msa0031010:CDS
TGGTCTAGAACTCTATGTTT+TGG 0.392947 1_1:+57571998 Msa0031010:CDS
ATATGTGGAACTACCCTTGC+CGG 0.395243 1_1:+57576862 Msa0031010:CDS
TTGCCTCCTCATCATTCTGT+TGG 0.396110 1_1:-57573167 None:intergenic
TGTTAGACTCACTTGCTGCT+TGG 0.402132 1_1:-57572235 None:intergenic
TTCTAGCCTTTGGCGTACAT+TGG 0.406843 1_1:+57576887 Msa0031010:CDS
GGAGTCCTGCTCTTTCTACT+AGG 0.409608 1_1:+57576952 Msa0031010:CDS
CAATTCATCAATTCTATAAC+CGG 0.413490 1_1:-57571886 None:intergenic
AGTTCTAGACCAGCCCAAAC+AGG 0.414800 1_1:-57571987 None:intergenic
AGCAGGACTCCAACAATTAT+GGG 0.421556 1_1:-57576940 None:intergenic
TACTTGAATCCTTTGTATGA+TGG 0.432772 1_1:+57576222 Msa0031010:CDS
TGAAGTTCCAATTATAATAG+TGG 0.434981 1_1:-57571934 None:intergenic
CAAAGCAACAGAAGAATCAT+TGG 0.439510 1_1:+57572292 Msa0031010:CDS
TTCAGGCTAATTTAGCAAGA+TGG 0.439855 1_1:+57577715 Msa0031010:intron
TTTCACAAATTTGCACAACT+TGG 0.440882 1_1:-57570740 None:intergenic
TTGAAGAAAGCTTGGGAGGT+GGG 0.442474 1_1:+57576126 Msa0031010:CDS
TCTAGCCTTTGGCGTACATT+GGG 0.446032 1_1:+57576888 Msa0031010:CDS
ACTGTTCGCCCTGTTTGGGC+TGG 0.446255 1_1:+57571978 Msa0031010:CDS
AACCTAACCTTGCAAAGAGT+TGG 0.446689 1_1:-57572045 None:intergenic
TACTTGAAACCTTTATATGA+TGG 0.450489 1_1:+57570853 Msa0031010:CDS
CAATTGGAACCCATAATTGT+TGG 0.452675 1_1:+57576931 Msa0031010:CDS
TCAGGCTAATTTAGCAAGAT+GGG 0.465820 1_1:+57577716 Msa0031010:intron
GAAATTCCAGCTCTCTTCCA+TGG 0.473583 1_1:-57570682 None:intergenic
TGACTAATGAAAAGGTAGAA+TGG 0.476764 1_1:+57570638 Msa0031010:CDS
GAACTGACCTTCCAAAGAGT+TGG 0.482827 1_1:-57577345 None:intergenic
TACGCCAAAGGCTAGAAATC+CGG 0.482915 1_1:-57576881 None:intergenic
CATTGGGTTGCTAGTAAAGC+AGG 0.488274 1_1:+57571187 Msa0031010:CDS
ATTAAAGATGACTAATGAAA+AGG 0.488687 1_1:+57570630 None:intergenic
AGTTCTAGACCAGCCCAAAC+AGG 0.489088 1_1:-57577287 None:intergenic
TTTGAAGAAAGCTTGGGAGG+TGG 0.490681 1_1:+57576125 Msa0031010:CDS
TCTTAAGACACTTGCAGAGT+TGG 0.491371 1_1:-57578075 None:intergenic
CATTGGGTTGCTAGTAAAGC+AGG 0.502492 1_1:+57576904 Msa0031010:CDS
TCCATGGACCATCTTCTACC+TGG 0.506733 1_1:-57570666 None:intergenic
GAAATTCTAGCTCTCTTCCA+TGG 0.507101 1_1:-57576051 None:intergenic
CAAAGCAACAGAAGTATCAA+TGG 0.508008 1_1:+57577597 Msa0031010:CDS
CTGGAATTTCTTGCAGCATG+TGG 0.508092 1_1:+57570695 Msa0031010:CDS
AATCTTCTTGATTTCATCTG+AGG 0.508625 1_1:-57578024 None:intergenic
CTAGTAAAGCAGGAGATCAA+TGG 0.509667 1_1:+57571197 Msa0031010:CDS
TTTCATTATTCTAGGAGTAA+GGG 0.510656 1_1:+57576343 Msa0031010:intron
ATTATTCGACCTGTTTGGGC+TGG 0.512091 1_1:+57577278 Msa0031010:CDS
AAAAGTATAAATAGAATATG+TGG 0.516571 1_1:+57576847 Msa0031010:CDS
AAAGGTAGGAATAGCACTTA+CGG 0.517885 1_1:+57576182 Msa0031010:CDS
TAGTAAAGCAGGAGATCAAT+GGG 0.520063 1_1:+57571198 Msa0031010:CDS
AATCCTTTGTATGATGGAGT+TGG 0.525534 1_1:+57576228 Msa0031010:CDS
AAATTGAAGCGACCGTGGGC+AGG 0.526155 1_1:-57577741 None:intergenic
GATGGTCCATGGAAGAGAGC+TGG 0.527590 1_1:+57570676 Msa0031010:CDS
TTCATCCATTGTTTAAAGGT+AGG 0.527615 1_1:+57576168 Msa0031010:CDS
AAAAGTGTAAACAGAATATG+TGG 0.528989 1_1:+57571130 Msa0031010:CDS
TAGTAAAGCAGGAAAGCAAT+TGG 0.530375 1_1:+57576915 Msa0031010:CDS
GAGCACAACATCAATGAAAG+TGG 0.530404 1_1:+57578049 Msa0031010:CDS
TACACCAAAGGCTAGAAGCC+CGG 0.532274 1_1:-57571164 None:intergenic
AAACCTTTATATGATGGTGT+TGG 0.534000 1_1:+57570859 Msa0031010:CDS
AAACTTGCCAACTCTTTGGA+AGG 0.537693 1_1:+57577338 Msa0031010:CDS
TGGAGAATCCAGGTAGAAGA+TGG 0.550522 1_1:+57570658 Msa0031010:CDS
TGGAGTATCAAGGTAGAAGA+TGG 0.555329 1_1:+57576027 Msa0031010:intron
TATGTGGAACTACCCTTGCC+GGG 0.557506 1_1:+57571146 Msa0031010:CDS
TGGAATTTCTTGCAGCATGT+GGG 0.565529 1_1:+57570696 Msa0031010:CDS
CTATTCCTACCTTTAAACAA+TGG 0.566154 1_1:-57576173 None:intergenic
AATAATAGAATTAATTCAAG+TGG 0.567797 1_1:+57572990 Msa0031010:CDS
AAAGGCTAGAAGCCCGGCAA+GGG 0.569854 1_1:-57571158 None:intergenic
CTTCCAACTCCATCATACAA+AGG 0.572397 1_1:-57576231 None:intergenic
GTAGTCTTTGAGTACACTGC+GGG 0.575767 1_1:+57570916 Msa0031010:CDS
TCAAGGTAGAAGATGGTCCA+TGG 0.576705 1_1:+57576034 Msa0031010:intron
TCCAGGTAGAAGATGGTCCA+TGG 0.576984 1_1:+57570665 Msa0031010:CDS
AAACTCGCCAACTCTTTGCA+AGG 0.580589 1_1:+57572038 Msa0031010:CDS
AAAGGTAGAATGGAGAATCC+AGG 0.582137 1_1:+57570648 Msa0031010:CDS
GTTCTAGACCAGCCCAAACA+GGG 0.583021 1_1:-57571986 None:intergenic
GACGAAAATTGAAGCGACCG+TGG 0.583474 1_1:-57577746 None:intergenic
TGGAGTTGGAAGAAATGCTA+TGG 0.586387 1_1:+57576242 Msa0031010:CDS
GTTGTCACCTACTTTCATAG+AGG 0.589780 1_1:-57572788 None:intergenic
AATGCAAAAGAAACATCCCT+TGG 0.591201 1_1:+57578224 Msa0031010:CDS
TACTGAAATTGTAGCTCGTG+TGG 0.591275 1_1:+57573032 Msa0031010:CDS
GGAAGTAATTCAAGTGGTCA+CGG 0.591717 1_1:+57578274 Msa0031010:CDS
GCAAGATGGGAGCCTGCCCA+CGG 0.596456 1_1:+57577729 Msa0031010:CDS
TACTGAAACTGTAGCTCGTG+TGG 0.597026 1_1:+57578310 Msa0031010:CDS
AGCAGAACCTCTATGAAAGT+AGG 0.598229 1_1:+57572781 Msa0031010:CDS
GGAGTTGGAAGAAATGCTAT+GGG 0.601072 1_1:+57576243 Msa0031010:CDS
CAAAGGCTAGAAGCCCGGCA+AGG 0.602133 1_1:-57571159 None:intergenic
TTGAAACCAAACTGAAAGTG+AGG 0.606576 1_1:-57571860 None:intergenic
TTGCATAAATTCAGAAAACA+AGG 0.607863 1_1:+57572573 Msa0031010:CDS
AAAGGCTAGAAATCCGGCAA+GGG 0.610657 1_1:-57576875 None:intergenic
TTATACCTAGTAGAAAGAGC+AGG 0.611127 1_1:-57576957 None:intergenic
TGAAGCTCAATCAACAAGTG+AGG 0.612032 1_1:+57577531 Msa0031010:CDS
CAAAGGCTAGAAATCCGGCA+AGG 0.615093 1_1:-57576876 None:intergenic
AAGAGTTGGCAAGTTTGTCG+AGG 0.616195 1_1:-57577331 None:intergenic
TGTTTGATATGGCACGACAA+AGG 0.616649 1_1:+57577207 Msa0031010:CDS
ATGTATAAATTCAGAAAACA+AGG 0.617477 1_1:+57577842 Msa0031010:CDS
AAGAGTTGGCGAGTTTGTCG+AGG 0.617634 1_1:-57572031 None:intergenic
AGCACAACATCAATGAAAGT+GGG 0.618681 1_1:+57578050 Msa0031010:CDS
AGCATGTGTGCATTTATCGT+AGG 0.621407 1_1:+57576078 Msa0031010:CDS
ACGAAAATTGAAGCGACCGT+GGG 0.621590 1_1:-57577745 None:intergenic
AATAATGGAAGTAATTCAAG+TGG 0.632468 1_1:+57578268 Msa0031010:CDS
AATCTTCATGATGTCATCTG+AGG 0.633279 1_1:-57572755 None:intergenic
TGAAGCACATCTACGCATTG+TGG 0.638502 1_1:-57577799 None:intergenic
GTACTCAAAGACTACAATCA+CGG 0.651714 1_1:-57570908 None:intergenic
AGCAACCCAATGTACACCAA+AGG 0.653502 1_1:-57571176 None:intergenic
AGCAACCCAATGTACGCCAA+AGG 0.653502 1_1:-57576893 None:intergenic
GTGTTGGAAGAAATGCTATG+TGG 0.665026 1_1:+57570875 Msa0031010:CDS
TGTTGGAAGAAATGCTATGT+GGG 0.671135 1_1:+57570876 Msa0031010:CDS
AGACCAACAGAATGATGAGG+AGG 0.675708 1_1:+57573164 Msa0031010:CDS
TTGGAAGAAATGCTATGGGG+CGG 0.681241 1_1:+57576247 Msa0031010:CDS
ACCAGACCAACAGAATGATG+AGG 0.697039 1_1:+57573161 Msa0031010:CDS
TGTAGTCTTTGAGTACACTG+CGG 0.756186 1_1:+57570915 Msa0031010:CDS
GAGTTGGAAGAAATGCTATG+GGG 0.761613 1_1:+57576244 Msa0031010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+GGG - chr1_1:57571655-57571674 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr1_1:57571656-57571675 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTATATA+TGG - chr1_1:57578776-57578795 None:intergenic 0.0%
!!! TTTTATTTAATAGTTATTTC+TGG + chr1_1:57571384-57571403 Msa0031010:intron 10.0%
!!! AAGTAATTACTATTATTTTT+TGG + chr1_1:57572636-57572655 Msa0031010:intron 10.0%
!! ATAAATATTAATGTAATAAG+AGG + chr1_1:57573465-57573484 Msa0031010:intron 10.0%
!!! TTAATGTCATTTTATTTAAA+GGG - chr1_1:57575696-57575715 None:intergenic 10.0%
!!! TTTAATGTCATTTTATTTAA+AGG - chr1_1:57575697-57575716 None:intergenic 10.0%
!! TCTATTTATATAGAAATAAT+GGG - chr1_1:57575889-57575908 None:intergenic 10.0%
!! TTCTATTTATATAGAAATAA+TGG - chr1_1:57575890-57575909 None:intergenic 10.0%
!! ATTAATTAACAACTAAAATT+AGG - chr1_1:57576404-57576423 None:intergenic 10.0%
!! GCAATTATAAAAAATAAATT+TGG + chr1_1:57577879-57577898 Msa0031010:intron 10.0%
!!! TTTTCTACAATTTTTTTTAT+AGG - chr1_1:57578970-57578989 None:intergenic 10.0%
!! ATAAAAAAAATTGTAGAAAA+AGG + chr1_1:57578970-57578989 Msa0031010:intron 10.0%
!! TAGTATATATAAATATCACA+AGG - chr1_1:57571081-57571100 None:intergenic 15.0%
!! TATAATTATTTGTACATATG+TGG + chr1_1:57572182-57572201 Msa0031010:intron 15.0%
!!! TAAATTAATTTAAGGGTATA+TGG - chr1_1:57572348-57572367 None:intergenic 15.0%
!!! ATTAGGGTTAAATATATTTT+TGG - chr1_1:57572391-57572410 None:intergenic 15.0%
!! TAGTCATGTTATATAAATTA+GGG - chr1_1:57572407-57572426 None:intergenic 15.0%
!! TTAGTCATGTTATATAAATT+AGG - chr1_1:57572408-57572427 None:intergenic 15.0%
!!! TTAATATTTTGTTGATTTTC+AGG + chr1_1:57572429-57572448 Msa0031010:intron 15.0%
!! CTTGAATTAATTCTATTATT+GGG - chr1_1:57572990-57573009 None:intergenic 15.0%
!! ACTTGAATTAATTCTATTAT+TGG - chr1_1:57572991-57573010 None:intergenic 15.0%
!! AATAATAGAATTAATTCAAG+TGG + chr1_1:57572990-57573009 Msa0031010:CDS 15.0%
!! TATATATACAAGAAGAAAAA+TGG + chr1_1:57573314-57573333 Msa0031010:intron 15.0%
!!! AATGCAAAATTAATGATTTT+TGG - chr1_1:57573393-57573412 None:intergenic 15.0%
!! CATTAATATTTATTATTGTG+TGG - chr1_1:57573458-57573477 None:intergenic 15.0%
!! TATTATTTCATTTAAATGTG+AGG - chr1_1:57573869-57573888 None:intergenic 15.0%
!!! TCTTAATTAAATGATTAGTT+TGG + chr1_1:57574352-57574371 Msa0031010:intron 15.0%
!! AATTCAATAAACAATATAAG+TGG + chr1_1:57574455-57574474 Msa0031010:intron 15.0%
!!! TGATACTTGTTTTAATATAT+TGG - chr1_1:57575040-57575059 None:intergenic 15.0%
!!! GAATTAAAAAAACTTTGTTT+AGG + chr1_1:57575402-57575421 Msa0031010:intron 15.0%
!! TTATTATGATGTGATTAATA+TGG + chr1_1:57575717-57575736 Msa0031010:intron 15.0%
!! TATTATGATGTGATTAATAT+GGG + chr1_1:57575718-57575737 Msa0031010:intron 15.0%
!! CTATTTATATAGAAATAATG+GGG - chr1_1:57575888-57575907 None:intergenic 15.0%
!! GAGTACTATAAAAAAAAAAA+TGG + chr1_1:57575969-57575988 Msa0031010:intron 15.0%
!! TAGAATAATGAAATTATAGA+CGG - chr1_1:57576336-57576355 None:intergenic 15.0%
!!! TTAATTTAAGGTCAAAATTA+TGG + chr1_1:57576447-57576466 Msa0031010:intron 15.0%
!! TTTATATCAAAAATGTTGTA+TGG - chr1_1:57576580-57576599 None:intergenic 15.0%
!!! AAAAGTATAAATAGAATATG+TGG + chr1_1:57576847-57576866 Msa0031010:CDS 15.0%
!!! CATACTAATAATATTTTTGT+TGG - chr1_1:57576992-57577011 None:intergenic 15.0%
!!! ATTATTTCATCTTTGTTTTT+AGG + chr1_1:57577065-57577084 Msa0031010:intron 15.0%
!!! AAATATCATTGATTAATTTC+AGG + chr1_1:57577698-57577717 Msa0031010:intron 15.0%
!! AAATAATTAAATGTACCTTA+GGG - chr1_1:57577996-57578015 None:intergenic 15.0%
!! AAAATAATTAAATGTACCTT+AGG - chr1_1:57577997-57578016 None:intergenic 15.0%
!! ATTTATAAAAGGCTAAAATA+TGG + chr1_1:57578905-57578924 Msa0031010:intron 15.0%
!!! AAAAAACAAAATATTTTGCA+GGG - chr1_1:57579384-57579403 None:intergenic 15.0%
!!! TAAAAAACAAAATATTTTGC+AGG - chr1_1:57579383-57579402 None:intergenic 15.0%
!!! TAAAAAACAAAATATTTTGC+AGG + chr1_1:57579383-57579402 Msa0031010:intron 15.0%
!!! AAAAAACAAAATATTTTGCA+GGG + chr1_1:57579384-57579403 Msa0031010:intron 15.0%
!!! ATTTTATAAAGGCTAAAATA+TGG - chr1_1:57579507-57579526 None:intergenic 15.0%
!!! AGTATATATGATATTTTGTT+CGG - chr1_1:57580161-57580180 None:intergenic 15.0%
!! AATATTTAAGCAATAATGTT+AGG - chr1_1:57580488-57580507 None:intergenic 15.0%
!! TAATTTCAAATGTTAATGTT+TGG + chr1_1:57580540-57580559 Msa0031010:intron 15.0%
!!! TATACTATATGTTAATTTGC+AGG + chr1_1:57571094-57571113 Msa0031010:intron 20.0%
!! TGTGTGTGTATATATATATA+GGG + chr1_1:57571435-57571454 Msa0031010:intron 20.0%
!! AAGATTTATACCAACTATAA+AGG + chr1_1:57571806-57571825 Msa0031010:intron 20.0%
!! AATTGATGAATTGTTTGATT+TGG + chr1_1:57571896-57571915 Msa0031010:CDS 20.0%
!! AGAATTTCCACTATTATAAT+TGG + chr1_1:57571927-57571946 Msa0031010:CDS 20.0%
!!! ATTTTTTAAGAAAAGTCTTG+TGG - chr1_1:57572076-57572095 None:intergenic 20.0%
!! ATATGGTAATTAAAATCTCT+TGG - chr1_1:57572331-57572350 None:intergenic 20.0%
!! CCGGTTATAAATTAATTTAA+GGG - chr1_1:57572355-57572374 None:intergenic 20.0%
!! CCCTTAAATTAATTTATAAC+CGG + chr1_1:57572352-57572371 Msa0031010:intron 20.0%
!! TCCGGTTATAAATTAATTTA+AGG - chr1_1:57572356-57572375 None:intergenic 20.0%
!! TTTATAACCGGATATTTATA+AGG + chr1_1:57572364-57572383 Msa0031010:intron 20.0%
!!! TACTTATGAGTTTCTTTTTA+TGG + chr1_1:57573414-57573433 Msa0031010:intron 20.0%
!!! AGATGATTATTTAGTTTGTT+TGG + chr1_1:57573776-57573795 Msa0031010:intron 20.0%
!! AAACACATTCTAAACATTAT+GGG + chr1_1:57574194-57574213 Msa0031010:intron 20.0%
!!! TTTTGTAAAAACTTAGTTTG+AGG + chr1_1:57574637-57574656 Msa0031010:intron 20.0%
!!! TCAACATAATTGTATTTTCT+TGG - chr1_1:57574801-57574820 None:intergenic 20.0%
!!! TTTAATGGATACATTTTTGA+TGG + chr1_1:57575238-57575257 Msa0031010:intron 20.0%
!! TTCATTTAATAGTAAGTACT+AGG - chr1_1:57575288-57575307 None:intergenic 20.0%
!!! TTTTTTTAGAATGTTATCCA+TGG + chr1_1:57575457-57575476 Msa0031010:intron 20.0%
!! TTACTATTAACTAGTTGATT+GGG - chr1_1:57575596-57575615 None:intergenic 20.0%
!! ATTACTATTAACTAGTTGAT+TGG - chr1_1:57575597-57575616 None:intergenic 20.0%
!! TTTAACTCTAGACAATAATT+TGG - chr1_1:57575823-57575842 None:intergenic 20.0%
!! AAAATTCATCCATTGTTTAA+AGG + chr1_1:57576164-57576183 Msa0031010:CDS 20.0%
!! GTCTATAATTTCATTATTCT+AGG + chr1_1:57576335-57576354 Msa0031010:intron 20.0%
!! TTAATCACGTTAAAAAAATG+TGG + chr1_1:57576614-57576633 Msa0031010:intron 20.0%
!! GTTAATCACATGTAAAATTA+TGG - chr1_1:57576744-57576763 None:intergenic 20.0%
!! ATTACAATGTATATGAATCT+TGG + chr1_1:57577024-57577043 Msa0031010:intron 20.0%
!! AATTGATGAATTGTTTGATA+TGG + chr1_1:57577196-57577215 Msa0031010:CDS 20.0%
!! AGGATTTCTACTATTATAAT+TGG + chr1_1:57577227-57577246 Msa0031010:CDS 20.0%
!! TTATATATCTGCAATAAAGA+AGG - chr1_1:57577468-57577487 None:intergenic 20.0%
!! ATGTATAAATTCAGAAAACA+AGG + chr1_1:57577842-57577861 Msa0031010:CDS 20.0%
!! TTGTTTGAATAATTAGGAAA+TGG + chr1_1:57578480-57578499 Msa0031010:intron 20.0%
!!! TTGTTTTTTAAAATAGTCTC+TGG - chr1_1:57579373-57579392 None:intergenic 20.0%
!! GTAAAAAGAATTGTAGAAAA+AGG - chr1_1:57579442-57579461 None:intergenic 20.0%
!!! TTTCTACAATTCTTTTTACA+AGG + chr1_1:57579443-57579462 Msa0031010:intron 20.0%
!!! GATTCTTAGTCATTTTATAA+AGG - chr1_1:57579518-57579537 None:intergenic 20.0%
!!! TTCGATTTCATTAAGAATTT+TGG + chr1_1:57579665-57579684 Msa0031010:intron 20.0%
!!! TCGATTTCATTAAGAATTTT+GGG + chr1_1:57579666-57579685 Msa0031010:intron 20.0%
!!! TCTTACTTAGTTTGTTAATT+TGG - chr1_1:57579937-57579956 None:intergenic 20.0%
!!! TTTATTTTGAGATCCATAAT+TGG - chr1_1:57579989-57580008 None:intergenic 20.0%
!! CTACTAAGAATAACTTAATA+AGG - chr1_1:57580281-57580300 None:intergenic 20.0%
!! CTTATTAAGTTATTCTTAGT+AGG + chr1_1:57580279-57580298 Msa0031010:intron 20.0%
!!! TTGCTTAAATATTAGTCTAA+AGG + chr1_1:57580495-57580514 Msa0031010:intron 20.0%
! CAAATTTGTGAAAAAAGCTT+GGG + chr1_1:57570750-57570769 Msa0031010:CDS 25.0%
!! AACAATGGATGAATTTTCTA+GGG - chr1_1:57570792-57570811 None:intergenic 25.0%
!! AAACAATGGATGAATTTTCT+AGG - chr1_1:57570793-57570812 None:intergenic 25.0%
! TACTTGAAACCTTTATATGA+TGG + chr1_1:57570853-57570872 Msa0031010:CDS 25.0%
!!! ATTCACATTTTAACGAACTA+TGG - chr1_1:57570955-57570974 None:intergenic 25.0%
!! AAAAGTGTAAACAGAATATG+TGG + chr1_1:57571130-57571149 Msa0031010:CDS 25.0%
! GTGTGTGTGTATATATATAT+AGG + chr1_1:57571434-57571453 Msa0031010:intron 25.0%
! TGGTATAAATCTTGAAAATG+TGG - chr1_1:57571799-57571818 None:intergenic 25.0%
! CAATTCATCAATTCTATAAC+CGG - chr1_1:57571889-57571908 None:intergenic 25.0%
! TGAAGTTCCAATTATAATAG+TGG - chr1_1:57571937-57571956 None:intergenic 25.0%
! TGAGTCTAACAAAAATTTGA+TGG + chr1_1:57572247-57572266 Msa0031010:CDS 25.0%
! GAGTCTAACAAAAATTTGAT+GGG + chr1_1:57572248-57572267 Msa0031010:CDS 25.0%
!! TTTTGGTCCTTATAAATATC+CGG - chr1_1:57572374-57572393 None:intergenic 25.0%
!!! TTTTAAGATATTGCTTCCAT+GGG - chr1_1:57572504-57572523 None:intergenic 25.0%
!!! ATTTTAAGATATTGCTTCCA+TGG - chr1_1:57572505-57572524 None:intergenic 25.0%
! TGGAAGCAATATCTTAAAAT+TGG + chr1_1:57572505-57572524 Msa0031010:intron 25.0%
! TTGCATAAATTCAGAAAACA+AGG + chr1_1:57572573-57572592 Msa0031010:CDS 25.0%
! TACCTATATACTTAATCTTG+AGG + chr1_1:57572693-57572712 Msa0031010:intron 25.0%
!!! TAATAAATTCTGAAGCTCTA+GGG - chr1_1:57572908-57572927 None:intergenic 25.0%
!!! TTAATAAATTCTGAAGCTCT+AGG - chr1_1:57572909-57572928 None:intergenic 25.0%
!!! TTTGCATTTTTTTGTGTGTT+TGG - chr1_1:57572940-57572959 None:intergenic 25.0%
! ACACAAAAAAATGCAAAAGA+AGG + chr1_1:57572943-57572962 Msa0031010:intron 25.0%
! ATGTATCATGTAATATGTCA+TGG - chr1_1:57573274-57573293 None:intergenic 25.0%
!!! GCAAAATTAATGATTTTTGG+AGG - chr1_1:57573390-57573409 None:intergenic 25.0%
! TTGTGCAAAGTCTAAAAAAT+TGG + chr1_1:57573532-57573551 Msa0031010:intron 25.0%
!!! TGTGTAATTTTAAGAGACTA+AGG + chr1_1:57573670-57573689 Msa0031010:intron 25.0%
!!! GTGTAATTTTAAGAGACTAA+GGG + chr1_1:57573671-57573690 Msa0031010:intron 25.0%
!! ATATTAGAAGAGAATGGTTT+TGG + chr1_1:57573965-57573984 Msa0031010:intron 25.0%
! GAAACACATTCTAAACATTA+TGG + chr1_1:57574193-57574212 Msa0031010:intron 25.0%
!! TTTTTCTCTTGATTTCTCTT+AGG + chr1_1:57574248-57574267 Msa0031010:intron 25.0%
! ATGTGACAATTAAATTGAGA+TGG - chr1_1:57574316-57574335 None:intergenic 25.0%
! CTCAATTTAATTGTCACATT+TGG + chr1_1:57574317-57574336 Msa0031010:intron 25.0%
! TTAGTTGAGTAATTAAGTGA+AGG + chr1_1:57574430-57574449 Msa0031010:intron 25.0%
! TAGTTGAGTAATTAAGTGAA+GGG + chr1_1:57574431-57574450 Msa0031010:intron 25.0%
!! TAGATATTAAAGTTTGCTCT+TGG + chr1_1:57574575-57574594 Msa0031010:intron 25.0%
!! TTGTATTTATGCTCTAAATG+CGG + chr1_1:57574823-57574842 Msa0031010:intron 25.0%
! TTGATTTCTTTGTTCTCAAA+TGG - chr1_1:57574890-57574909 None:intergenic 25.0%
! ATTTGAGAACAAAGAAATCA+AGG + chr1_1:57574889-57574908 Msa0031010:intron 25.0%
! TAAAACAAGTATCATAGCAA+AGG + chr1_1:57575046-57575065 Msa0031010:intron 25.0%
! AAAACAAGTATCATAGCAAA+GGG + chr1_1:57575047-57575066 Msa0031010:intron 25.0%
! ACTCTGATTGAGAAAATTTA+AGG + chr1_1:57575074-57575093 Msa0031010:intron 25.0%
!!! TATCTGTTTCTTTTATCCAT+GGG - chr1_1:57575202-57575221 None:intergenic 25.0%
!!! ATATCTGTTTCTTTTATCCA+TGG - chr1_1:57575203-57575222 None:intergenic 25.0%
!! TTCAATTACCTGCTATTTAA+TGG + chr1_1:57575223-57575242 Msa0031010:intron 25.0%
! AAATGTATCCATTAAATAGC+AGG - chr1_1:57575234-57575253 None:intergenic 25.0%
! TCTTGATTCAACAAATTTGA+AGG - chr1_1:57575336-57575355 None:intergenic 25.0%
!! TAGGTAATTCACGAATTTTA+AGG - chr1_1:57575506-57575525 None:intergenic 25.0%
! TTTAATGTCAATGTACACAT+AGG - chr1_1:57575664-57575683 None:intergenic 25.0%
!! AAAATGTACTCCTTTAGTTT+GGG + chr1_1:57575908-57575927 Msa0031010:intron 25.0%
!! CATTATAGTTATAGAGCATT+TGG + chr1_1:57575941-57575960 Msa0031010:intron 25.0%
!!! CAAATTTTTGAAGAAAGCTT+GGG + chr1_1:57576119-57576138 Msa0031010:CDS 25.0%
!! AAACAATGGATGAATTTTCT+TGG - chr1_1:57570793-57570812 None:intergenic 25.0%
!! ATTTCATTATTCTAGGAGTA+AGG + chr1_1:57576342-57576361 Msa0031010:intron 25.0%
!! TTTCATTATTCTAGGAGTAA+GGG + chr1_1:57576343-57576362 Msa0031010:intron 25.0%
! CAGAGTTAACTGTTAATTTA+AGG + chr1_1:57576435-57576454 Msa0031010:intron 25.0%
! TATATAGACTATCAAATTGC+AGG + chr1_1:57576811-57576830 Msa0031010:intron 25.0%
!! ATAATCAAAACGAGCTTTTA+TGG - chr1_1:57577123-57577142 None:intergenic 25.0%
!!! ATAAAAGCTCGTTTTGATTA+TGG + chr1_1:57577122-57577141 Msa0031010:CDS 25.0%
! ATTTATCCTAACTTTCAGTT+TGG + chr1_1:57577154-57577173 Msa0031010:CDS 25.0%
!! ATTGTGTACAAATGTGTTTT+AGG + chr1_1:57577490-57577509 Msa0031010:intron 25.0%
! TTGAATTTATTAGAAACCCT+AGG - chr1_1:57577636-57577655 None:intergenic 25.0%
! ACATTCAAAAAATTCATACG+AGG - chr1_1:57577670-57577689 None:intergenic 25.0%
!!! TTTTAAGATATTGCTTCCAT+GGG - chr1_1:57572504-57572523 None:intergenic 25.0%
!!! ATTTTAAGATATTGCTTCCA+TGG - chr1_1:57572505-57572524 None:intergenic 25.0%
! TGGAAGCAATATCTTAAAAT+TGG + chr1_1:57572505-57572524 Msa0031010:intron 25.0%
!! GTCAAATAAACTTGATAGTT+TGG + chr1_1:57578130-57578149 Msa0031010:intron 25.0%
! AAAAATGGAAATCCCAATAA+TGG + chr1_1:57578253-57578272 Msa0031010:CDS 25.0%
! CTTGAATTACTTCCATTATT+GGG - chr1_1:57578268-57578287 None:intergenic 25.0%
! ACTTGAATTACTTCCATTAT+TGG - chr1_1:57578269-57578288 None:intergenic 25.0%
!! AATAATGGAAGTAATTCAAG+TGG + chr1_1:57578268-57578287 Msa0031010:CDS 25.0%
! TCCAGATTGTTTGAATAATT+AGG + chr1_1:57578474-57578493 Msa0031010:intron 25.0%
! TCCTAATTATTCAAACAATC+TGG - chr1_1:57578478-57578497 None:intergenic 25.0%
! ATCACAATTTACCATCTTAT+AGG + chr1_1:57578544-57578563 Msa0031010:intron 25.0%
! TATGGTAAACGACATTTATA+TGG - chr1_1:57578758-57578777 None:intergenic 25.0%
! AGTGAAGGACAATATAATTA+GGG - chr1_1:57578854-57578873 None:intergenic 25.0%
! TAGTGAAGGACAATATAATT+AGG - chr1_1:57578855-57578874 None:intergenic 25.0%
!!! ATTTTAAAAACTTGACTTCC+AGG - chr1_1:57579343-57579362 None:intergenic 25.0%
!!! TTTTTAAAATAGTCTCTGGA+GGG - chr1_1:57579369-57579388 None:intergenic 25.0%
!!! TTTTTTAAAATAGTCTCTGG+AGG - chr1_1:57579370-57579389 None:intergenic 25.0%
! AGTTAATACTTATCTAGTCT+GGG - chr1_1:57579646-57579665 None:intergenic 25.0%
! AAGTTAATACTTATCTAGTC+TGG - chr1_1:57579647-57579666 None:intergenic 25.0%
!!! ACTTAGTTTGTTAATTTGGT+TGG - chr1_1:57579933-57579952 None:intergenic 25.0%
! AGTCTTCTTTACATTTGATT+TGG - chr1_1:57580047-57580066 None:intergenic 25.0%
! AATATCATATATACTCCCAA+AGG + chr1_1:57580166-57580185 Msa0031010:intron 25.0%
! AATTCACAACATTGTATAAG+TGG - chr1_1:57580240-57580259 None:intergenic 25.0%
! AATGTTGTGAATTAGATTGA+AGG + chr1_1:57580247-57580266 Msa0031010:intron 25.0%
!! TGTCTTAACATGTTTTCTTA+AGG + chr1_1:57580456-57580475 Msa0031010:intron 25.0%
!! ATTAGTCTAAAGGCTAAAAT+TGG + chr1_1:57580505-57580524 Msa0031010:intron 25.0%
!! ATTTTCAAAAGGTTGTCAAA+TGG - chr1_1:57580591-57580610 None:intergenic 25.0%
TGACTAATGAAAAGGTAGAA+TGG + chr1_1:57570638-57570657 Msa0031010:CDS 30.0%
TTTCACAAATTTGCACAACT+TGG - chr1_1:57570743-57570762 None:intergenic 30.0%
GCAAATTTGTGAAAAAAGCT+TGG + chr1_1:57570749-57570768 Msa0031010:CDS 30.0%
TTCATCCATTGTTTGAAAGT+AGG + chr1_1:57570799-57570818 Msa0031010:intron 30.0%
CTATTCCTACTTTCAAACAA+TGG - chr1_1:57570807-57570826 None:intergenic 30.0%
! AAACCTTTATATGATGGTGT+TGG + chr1_1:57570859-57570878 Msa0031010:CDS 30.0%
!! TCAAATTTTAACGTCTGCAA+GGG - chr1_1:57570990-57571009 None:intergenic 30.0%
TTTACCTAGTAGAAAAAGTG+AGG - chr1_1:57571242-57571261 None:intergenic 30.0%
!! TATTTCTGGTATTTACGTGT+CGG + chr1_1:57571398-57571417 Msa0031010:intron 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr1_1:57571476-57571495 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr1_1:57571525-57571544 Msa0031010:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr1_1:57571531-57571550 None:intergenic 30.0%
!!! ATAAAGGCTCGTTTTGATTA+TGG + chr1_1:57571822-57571841 Msa0031010:intron 30.0%
ATTTATCCTCACTTTCAGTT+TGG + chr1_1:57571854-57571873 Msa0031010:CDS 30.0%
! TTCAGTTTGGTTTCAATATC+CGG + chr1_1:57571867-57571886 Msa0031010:CDS 30.0%
GGTAATTAAAATCTCTTGGA+AGG - chr1_1:57572327-57572346 None:intergenic 30.0%
TGCCTCAAGATTAAGTATAT+AGG - chr1_1:57572698-57572717 None:intergenic 30.0%
CAAAAAAATGCAAAAGAAGG+TGG + chr1_1:57572946-57572965 Msa0031010:intron 30.0%
TTGTCACATTTAGACATTTC+AGG - chr1_1:57573108-57573127 None:intergenic 30.0%
! CTTTGCACAATGAGATTTTA+AGG - chr1_1:57573522-57573541 None:intergenic 30.0%
ATCAAAGGAAAGATTGTAAG+TGG + chr1_1:57573706-57573725 Msa0031010:intron 30.0%
!! TTGGTATTGATGAAAGTGAT+AGG + chr1_1:57573795-57573814 Msa0031010:intron 30.0%
!!! GAGGCTATATATGTCATTTT+AGG - chr1_1:57573850-57573869 None:intergenic 30.0%
TGTAGGAAACTTAAAACCAA+AGG + chr1_1:57574136-57574155 Msa0031010:intron 30.0%
GTAGGAAACTTAAAACCAAA+GGG + chr1_1:57574137-57574156 Msa0031010:intron 30.0%
GACAATTAAATTGAGATGGA+GGG - chr1_1:57574312-57574331 None:intergenic 30.0%
TGACAATTAAATTGAGATGG+AGG - chr1_1:57574313-57574332 None:intergenic 30.0%
! TGTAAAAACTTAGTTTGAGG+TGG + chr1_1:57574640-57574659 Msa0031010:intron 30.0%
TGTCTTGTCTCAATAGTTAA+AGG - chr1_1:57574668-57574687 None:intergenic 30.0%
TTTAACTATTGAGACAAGAC+AGG + chr1_1:57574667-57574686 Msa0031010:intron 30.0%
TGACAATGGCTCATTATTAT+CGG + chr1_1:57574735-57574754 Msa0031010:intron 30.0%
! TGTATTTATGCTCTAAATGC+GGG + chr1_1:57574824-57574843 Msa0031010:intron 30.0%
AGAACAAAGAAATCAAGGAA+TGG + chr1_1:57574894-57574913 Msa0031010:intron 30.0%
AGAAATCAAGGAATGGTTAA+AGG + chr1_1:57574901-57574920 Msa0031010:intron 30.0%
GAATGCGAAAATGAATTCAT+TGG + chr1_1:57574928-57574947 Msa0031010:intron 30.0%
! ATACAACGAGATTTTCTTAG+TGG + chr1_1:57575110-57575129 Msa0031010:intron 30.0%
TGATTCAACAAATTTGAAGG+TGG - chr1_1:57575333-57575352 None:intergenic 30.0%
CATGTATATACAGATATCCA+TGG - chr1_1:57575477-57575496 None:intergenic 30.0%
TGGATATCTGTATATACATG+TGG + chr1_1:57575477-57575496 Msa0031010:intron 30.0%
GAAAATGTACTCCTTTAGTT+TGG + chr1_1:57575907-57575926 Msa0031010:intron 30.0%
!! GCAAATTTTTGAAGAAAGCT+TGG + chr1_1:57576118-57576137 Msa0031010:CDS 30.0%
TTCATCCATTGTTTAAAGGT+AGG + chr1_1:57576168-57576187 Msa0031010:CDS 30.0%
CTATTCCTACCTTTAAACAA+TGG - chr1_1:57576176-57576195 None:intergenic 30.0%
TACTTGAATCCTTTGTATGA+TGG + chr1_1:57576222-57576241 Msa0031010:CDS 30.0%
TTGAAACCAAACTGAAAGTT+AGG - chr1_1:57577163-57577182 None:intergenic 30.0%
! TTCAGTTTGGTTTCAATATC+TGG + chr1_1:57571867-57571886 Msa0031010:CDS 30.0%
GGAGTCTAACAAAAATTTGA+TGG + chr1_1:57577552-57577571 Msa0031010:CDS 30.0%
TTACTATATATCGATCGAGA+AGG - chr1_1:57577965-57577984 None:intergenic 30.0%
ATAGTAAGACAATAACCCTA+AGG + chr1_1:57577978-57577997 Msa0031010:intron 30.0%
AATCTTCTTGATTTCATCTG+AGG - chr1_1:57578027-57578046 None:intergenic 30.0%
TTGTTTAGATTTGTCACACT+TGG - chr1_1:57578396-57578415 None:intergenic 30.0%
ATGTGTAAATTACACACTAG+TGG - chr1_1:57578508-57578527 None:intergenic 30.0%
GTGTGTAATTTACACATAAG+AGG + chr1_1:57578511-57578530 Msa0031010:intron 30.0%
TCACACTTTACTATCTTATG+TGG + chr1_1:57578574-57578593 Msa0031010:intron 30.0%
GTGAAGGACAATATAATTAG+GGG - chr1_1:57578853-57578872 None:intergenic 30.0%
CAAAACAAGACATATTTGCA+GGG - chr1_1:57578938-57578957 None:intergenic 30.0%
TGCAAATCATCACAAAAGTA+GGG - chr1_1:57579034-57579053 None:intergenic 30.0%
! TCTTGCTTAAGAGTTAGTTT+GGG - chr1_1:57579621-57579640 None:intergenic 30.0%
TTCTTGCTTAAGAGTTAGTT+TGG - chr1_1:57579622-57579641 None:intergenic 30.0%
!!! TCATTAAGAATTTTGGGACT+TGG + chr1_1:57579672-57579691 Msa0031010:intron 30.0%
!!! CATTAAGAATTTTGGGACTT+GGG + chr1_1:57579673-57579692 Msa0031010:intron 30.0%
!!! ATTTTGAGATCCATAATTGG+TGG - chr1_1:57579986-57580005 None:intergenic 30.0%
!! ACATTTGATTTGGTGTGTTT+GGG - chr1_1:57580037-57580056 None:intergenic 30.0%
!! TACATTTGATTTGGTGTGTT+TGG - chr1_1:57580038-57580057 None:intergenic 30.0%
TTTCAGTTTGATCAATTGAG+AGG - chr1_1:57580087-57580106 None:intergenic 30.0%
! TATGATATTTTGTTCGGCAT+CGG - chr1_1:57580155-57580174 None:intergenic 30.0%
!!! TTTTAGGTTGTAAGTCCTTT+GGG - chr1_1:57580184-57580203 None:intergenic 30.0%
!!! TTTTTAGGTTGTAAGTCCTT+TGG - chr1_1:57580185-57580204 None:intergenic 30.0%
TTGTATAAGTGGATGTGATA+TGG - chr1_1:57580229-57580248 None:intergenic 30.0%
! TAAAGGCTAAAATTGGTGTT+AGG + chr1_1:57580512-57580531 Msa0031010:intron 30.0%
!! AAAGGCTAAAATTGGTGTTA+GGG + chr1_1:57580513-57580532 Msa0031010:intron 30.0%
CTTCCAACACCATCATATAA+AGG - chr1_1:57570865-57570884 None:intergenic 35.0%
TGTTGGAAGAAATGCTATGT+GGG + chr1_1:57570876-57570895 Msa0031010:CDS 35.0%
GTACTCAAAGACTACAATCA+CGG - chr1_1:57570911-57570930 None:intergenic 35.0%
!! CTCAAATTTTAACGTCTGCA+AGG - chr1_1:57570991-57571010 None:intergenic 35.0%
TAGTAAAGCAGGAGATCAAT+GGG + chr1_1:57571198-57571217 Msa0031010:CDS 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr1_1:57571463-57571482 Msa0031010:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr1_1:57571574-57571593 Msa0031010:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr1_1:57571592-57571611 None:intergenic 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr1_1:57571614-57571633 Msa0031010:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr1_1:57571619-57571638 None:intergenic 35.0%
TACACACTAGTTATCGATCT+TGG + chr1_1:57571721-57571740 Msa0031010:intron 35.0%
TCAAAACGAGCCTTTATAGT+TGG - chr1_1:57571819-57571838 None:intergenic 35.0%
TTGAAACCAAACTGAAAGTG+AGG - chr1_1:57571863-57571882 None:intergenic 35.0%
!! TGGTCTAGAACTCTATGTTT+TGG + chr1_1:57571998-57572017 Msa0031010:CDS 35.0%
!!! AGAACTCTATGTTTTGGTCA+CGG + chr1_1:57572004-57572023 Msa0031010:CDS 35.0%
TATTTGTACATATGTGGTGC+AGG + chr1_1:57572188-57572207 Msa0031010:intron 35.0%
! CAATGATTCTTCTGTTGCTT+TGG - chr1_1:57572294-57572313 None:intergenic 35.0%
CAAAGCAACAGAAGAATCAT+TGG + chr1_1:57572292-57572311 Msa0031010:CDS 35.0%
TTCAGGCTAATTTAGCTAGA+TGG + chr1_1:57572446-57572465 Msa0031010:intron 35.0%
TCAGGCTAATTTAGCTAGAT+GGG + chr1_1:57572447-57572466 Msa0031010:intron 35.0%
! TCTTGCATTGATGCTCTTAT+TGG + chr1_1:57572550-57572569 Msa0031010:CDS 35.0%
AATCTTCATGATGTCATCTG+AGG - chr1_1:57572758-57572777 None:intergenic 35.0%
GTTGTCTGTTGAATGTTGTT+TGG - chr1_1:57573133-57573152 None:intergenic 35.0%
AAAAATCAAGACACTCCAGA+TGG + chr1_1:57573188-57573207 Msa0031010:CDS 35.0%
TCCAGATGGTTTGAATAATG+AGG + chr1_1:57573202-57573221 Msa0031010:intron 35.0%
TCCTCATTATTCAAACCATC+TGG - chr1_1:57573206-57573225 None:intergenic 35.0%
! TAAGAGACTAAGGGTTTGTT+TGG + chr1_1:57573680-57573699 Msa0031010:intron 35.0%
GTAAGTGGAAAGATTGTTGA+AGG + chr1_1:57573721-57573740 Msa0031010:intron 35.0%
GAAAGTGAGTAGAAAGTGAA+TGG + chr1_1:57573747-57573766 Msa0031010:intron 35.0%
GAAAGTGATAGGAAAGTGAA+AGG + chr1_1:57573806-57573825 Msa0031010:intron 35.0%
! TAATATGCGCAGAAAGTATG+AGG - chr1_1:57573951-57573970 None:intergenic 35.0%
!!! AAGAGAATGGTTTTGGACAT+GGG + chr1_1:57573972-57573991 Msa0031010:intron 35.0%
TGGGAAAGAAGAATCTTTGT+GGG - chr1_1:57573999-57574018 None:intergenic 35.0%
!! AAAGTGAATGGATTGATAGG+AGG - chr1_1:57574082-57574101 None:intergenic 35.0%
!! AGGAAAGTGAATGGATTGAT+AGG - chr1_1:57574085-57574104 None:intergenic 35.0%
TTGGTTTCAAGGAAAGTGAA+TGG - chr1_1:57574094-57574113 None:intergenic 35.0%
CTACAAGTTTCATCCTTTAG+GGG - chr1_1:57574121-57574140 None:intergenic 35.0%
CCTACAAGTTTCATCCTTTA+GGG - chr1_1:57574122-57574141 None:intergenic 35.0%
TCCTACAAGTTTCATCCTTT+AGG - chr1_1:57574123-57574142 None:intergenic 35.0%
TTGAGGTGAGATTCTTAGAT+TGG + chr1_1:57574170-57574189 Msa0031010:intron 35.0%
TGAGGTGAGATTCTTAGATT+GGG + chr1_1:57574171-57574190 Msa0031010:intron 35.0%
AGTGAGATCTTATTAGAGGA+AGG + chr1_1:57574218-57574237 Msa0031010:intron 35.0%
AAGTGGAAGAAAACTGACAA+TGG + chr1_1:57574721-57574740 Msa0031010:intron 35.0%
AATCAAGGAATGGTTAAAGG+CGG + chr1_1:57574904-57574923 Msa0031010:intron 35.0%
!! GAACCAAACTTTAAAGCTTG+TGG + chr1_1:57574955-57574974 Msa0031010:intron 35.0%
!! TCTCCACAAGCTTTAAAGTT+TGG - chr1_1:57574961-57574980 None:intergenic 35.0%
TGGAGATACCTAAGAAACAA+AGG + chr1_1:57574975-57574994 Msa0031010:intron 35.0%
GGAGATACCTAAGAAACAAA+GGG + chr1_1:57574976-57574995 Msa0031010:intron 35.0%
TTCTACAAGTAAGATATCCG+TGG + chr1_1:57575143-57575162 Msa0031010:intron 35.0%
CAACAAATTTGAAGGTGGTA+AGG - chr1_1:57575328-57575347 None:intergenic 35.0%
! AGTTGATACCCAGACAAATA+TGG + chr1_1:57575529-57575548 Msa0031010:intron 35.0%
GAAGTTCTCCATATTTGTCT+GGG - chr1_1:57575540-57575559 None:intergenic 35.0%
TGAAGTTCTCCATATTTGTC+TGG - chr1_1:57575541-57575560 None:intergenic 35.0%
! TAGTTATAGAGCATTTGGCA+AGG + chr1_1:57575946-57575965 Msa0031010:intron 35.0%
! AGTTATAGAGCATTTGGCAA+GGG + chr1_1:57575947-57575966 Msa0031010:intron 35.0%
AAAATGGCTCATGATGACAA+TGG + chr1_1:57575985-57576004 Msa0031010:intron 35.0%
! AGAAGTAGAATGGAGTATCA+AGG + chr1_1:57576017-57576036 Msa0031010:intron 35.0%
!! ATTTTTGAAGAAAGCTTGGG+AGG + chr1_1:57576122-57576141 Msa0031010:CDS 35.0%
AAAGGTAGGAATAGCACTTA+CGG + chr1_1:57576182-57576201 Msa0031010:CDS 35.0%
! AATCCTTTGTATGATGGAGT+TGG + chr1_1:57576228-57576247 Msa0031010:CDS 35.0%
ACCATATTCACTGTTTAACG+TGG + chr1_1:57576490-57576509 Msa0031010:intron 35.0%
ACCACGTTAAACAGTGAATA+TGG - chr1_1:57576494-57576513 None:intergenic 35.0%
TTAACCATGTGTTGCAGATT+AGG + chr1_1:57576541-57576560 Msa0031010:intron 35.0%
TAACCATGTGTTGCAGATTA+GGG + chr1_1:57576542-57576561 Msa0031010:intron 35.0%
CGCATTGAAAATTGTGAATG+TGG - chr1_1:57576710-57576729 None:intergenic 35.0%
ATGTGATTAACCATGTGTCA+CGG + chr1_1:57576753-57576772 Msa0031010:intron 35.0%
TAGTAAAGCAGGAAAGCAAT+TGG + chr1_1:57576915-57576934 Msa0031010:CDS 35.0%
CAATTGGAACCCATAATTGT+TGG + chr1_1:57576931-57576950 Msa0031010:CDS 35.0%
TTATACCTAGTAGAAAGAGC+AGG - chr1_1:57576960-57576979 None:intergenic 35.0%
! CAAAACGAGCTTTTATGGTT+GGG - chr1_1:57577118-57577137 None:intergenic 35.0%
! TCAAAACGAGCTTTTATGGT+TGG - chr1_1:57577119-57577138 None:intergenic 35.0%
CATGATTATTCGACCTGTTT+GGG + chr1_1:57577274-57577293 Msa0031010:CDS 35.0%
!!! GAACTCTATGTTTTAGTCAC+CGG + chr1_1:57577305-57577324 Msa0031010:CDS 35.0%
!!! CAAATGTGTTTTAGGTTGTG+TGG + chr1_1:57577498-57577517 Msa0031010:intron 35.0%
! CATTGATACTTCTGTTGCTT+TGG - chr1_1:57577599-57577618 None:intergenic 35.0%
!! CAAAGCAACAGAAGTATCAA+TGG + chr1_1:57577597-57577616 Msa0031010:CDS 35.0%
TTCAGGCTAATTTAGCAAGA+TGG + chr1_1:57577715-57577734 Msa0031010:intron 35.0%
TCAGGCTAATTTAGCAAGAT+GGG + chr1_1:57577716-57577735 Msa0031010:intron 35.0%
! TCATGTATTGATGCTCTTGT+TGG + chr1_1:57577819-57577838 Msa0031010:CDS 35.0%
AATTTGGATAGTGTGCTATG+AGG + chr1_1:57577895-57577914 Msa0031010:intron 35.0%
AGCACAACATCAATGAAAGT+GGG + chr1_1:57578050-57578069 Msa0031010:CDS 35.0%
AATGCAAAAGAAACATCCCT+TGG + chr1_1:57578224-57578243 Msa0031010:CDS 35.0%
!! TTCCATTTTTGCATCACCAA+GGG - chr1_1:57578243-57578262 None:intergenic 35.0%
!! TTTCCATTTTTGCATCACCA+AGG - chr1_1:57578244-57578263 None:intergenic 35.0%
!! GGACATTTCTGTTTTGAACT+TGG - chr1_1:57578375-57578394 None:intergenic 35.0%
GTGATTTAGCACCTATAAGA+TGG - chr1_1:57578558-57578577 None:intergenic 35.0%
TAATGGCTTGAAAGTAGTGA+AGG - chr1_1:57578869-57578888 None:intergenic 35.0%
CCAAAACAAGACATATTTGC+AGG - chr1_1:57578939-57578958 None:intergenic 35.0%
!!! CCTGCAAATATGTCTTGTTT+TGG + chr1_1:57578936-57578955 Msa0031010:intron 35.0%
CTGCAAATCATCACAAAAGT+AGG - chr1_1:57579035-57579054 None:intergenic 35.0%
ATGAGTACAACCTATGAAAC+AGG - chr1_1:57579124-57579143 None:intergenic 35.0%
AGAAAAGAAAGCCCCTATTT+GGG + chr1_1:57579286-57579305 Msa0031010:intron 35.0%
! CTTGCAAATATGTCTCGTTT+TGG - chr1_1:57579476-57579495 None:intergenic 35.0%
CAAAACGAGACATATTTGCA+AGG + chr1_1:57579474-57579493 Msa0031010:intron 35.0%
CTTGTTCAAAAGAAATACCC+AGG + chr1_1:57579711-57579730 Msa0031010:intron 35.0%
AGAGATTAAGCCACCAATTA+TGG + chr1_1:57579973-57579992 Msa0031010:intron 35.0%
! TTTGGTGTGTTTGGGTAATT+TGG - chr1_1:57580029-57580048 None:intergenic 35.0%
AGATGATCTGATAACCATGA+CGG + chr1_1:57580108-57580127 Msa0031010:intron 35.0%
GGACTTACAACCTAAAAAAC+AGG + chr1_1:57580187-57580206 Msa0031010:intron 35.0%
AAATGGCCATATAGGTTATG+GGG - chr1_1:57580574-57580593 None:intergenic 35.0%
CAAATGGCCATATAGGTTAT+GGG - chr1_1:57580575-57580594 None:intergenic 35.0%
TCAAATGGCCATATAGGTTA+TGG - chr1_1:57580576-57580595 None:intergenic 35.0%
AAAGGTAGAATGGAGAATCC+AGG + chr1_1:57570648-57570667 Msa0031010:CDS 40.0%
TGGAATTTCTTGCAGCATGT+GGG + chr1_1:57570696-57570715 Msa0031010:CDS 40.0%
GTGAAAAAAGCTTGGGAGAT+TGG + chr1_1:57570757-57570776 Msa0031010:CDS 40.0%
GTGTTGGAAGAAATGCTATG+TGG + chr1_1:57570875-57570894 Msa0031010:CDS 40.0%
TGTAGTCTTTGAGTACACTG+CGG + chr1_1:57570915-57570934 Msa0031010:CDS 40.0%
!!! AACGTCTGCAAGGGTATTTT+AGG - chr1_1:57570981-57571000 None:intergenic 40.0%
! TTCTAGCCTTTGGTGTACAT+TGG + chr1_1:57571170-57571189 Msa0031010:CDS 40.0%
! TCTAGCCTTTGGTGTACATT+GGG + chr1_1:57571171-57571190 Msa0031010:CDS 40.0%
CTAGTAAAGCAGGAGATCAA+TGG + chr1_1:57571197-57571216 Msa0031010:CDS 40.0%
CAATGGGAACCTGTAATTGT+TGG + chr1_1:57571214-57571233 Msa0031010:intron 40.0%
!!! GAACTCTATGTTTTGGTCAC+GGG + chr1_1:57572005-57572024 Msa0031010:CDS 40.0%
AACCTAACCTTGCAAAGAGT+TGG - chr1_1:57572048-57572067 None:intergenic 40.0%
! GTTTCAATTTTCGTCACCCA+TGG + chr1_1:57572485-57572504 Msa0031010:intron 40.0%
AGCAGAACCTCTATGAAAGT+AGG + chr1_1:57572781-57572800 Msa0031010:CDS 40.0%
GTTGTCACCTACTTTCATAG+AGG - chr1_1:57572791-57572810 None:intergenic 40.0%
TACTGAAATTGTAGCTCGTG+TGG + chr1_1:57573032-57573051 Msa0031010:CDS 40.0%
CACATAGACACGCACATAAT+TGG - chr1_1:57573355-57573374 None:intergenic 40.0%
! GGGTTTGTTTGGAAGATCAA+AGG + chr1_1:57573691-57573710 Msa0031010:intron 40.0%
CTGCGCATATTAGAAGAGAA+TGG + chr1_1:57573959-57573978 Msa0031010:intron 40.0%
!!! GAAGAGAATGGTTTTGGACA+TGG + chr1_1:57573971-57573990 Msa0031010:intron 40.0%
GTGGGAAAGAAGAATCTTTG+TGG - chr1_1:57574000-57574019 None:intergenic 40.0%
TCTCTGACATTGCAACCAAA+GGG + chr1_1:57574021-57574040 Msa0031010:intron 40.0%
AATGTGTTCTTTCCACCCTT+TGG - chr1_1:57574039-57574058 None:intergenic 40.0%
! GAGGAAGGATTGAAAGTGTA+TGG - chr1_1:57574063-57574082 None:intergenic 40.0%
!! TGAATGGATTGATAGGAGGA+AGG - chr1_1:57574078-57574097 None:intergenic 40.0%
CCCTAAAGGATGAAACTTGT+AGG + chr1_1:57574119-57574138 Msa0031010:intron 40.0%
GGGTAGTGAGATCTTATTAG+AGG + chr1_1:57574214-57574233 Msa0031010:intron 40.0%
GGTTGTGAGATTGGAAAAAG+TGG + chr1_1:57574282-57574301 Msa0031010:intron 40.0%
TGTCACATTTGGATTATGCG+AGG + chr1_1:57574328-57574347 Msa0031010:intron 40.0%
GACGACTATTGTTAGACAGA+TGG + chr1_1:57574550-57574569 Msa0031010:intron 40.0%
ACTATTGAGACAAGACAGGA+TGG + chr1_1:57574671-57574690 Msa0031010:intron 40.0%
CTATTGAGACAAGACAGGAT+GGG + chr1_1:57574672-57574691 Msa0031010:intron 40.0%
TATTGAGACAAGACAGGATG+GGG + chr1_1:57574673-57574692 Msa0031010:intron 40.0%
CTTCCACTTGAACTTGATGT+CGG - chr1_1:57574710-57574729 None:intergenic 40.0%
AATGGCTCATTATTATCGGC+TGG + chr1_1:57574739-57574758 Msa0031010:intron 40.0%
GAAAGATATATAGGGAGAGG+AGG + chr1_1:57574763-57574782 Msa0031010:intron 40.0%
! CACACTACCCTTTGTTTCTT+AGG - chr1_1:57574986-57575005 None:intergenic 40.0%
!! CTGTTTCTTTTATCCATGGG+AGG - chr1_1:57575199-57575218 None:intergenic 40.0%
GTACTAGGTACAGATATCCA+CGG - chr1_1:57575273-57575292 None:intergenic 40.0%
TGTCTGGGTATCAACTACAT+AGG - chr1_1:57575525-57575544 None:intergenic 40.0%
!! CGTGTAGTTTTGCATGAAGA+AGG + chr1_1:57575751-57575770 Msa0031010:intron 40.0%
GAGCGGTAAAAGAAGTAGAA+TGG + chr1_1:57576007-57576026 Msa0031010:intron 40.0%
! TGGAGTATCAAGGTAGAAGA+TGG + chr1_1:57576027-57576046 Msa0031010:intron 40.0%
!! GAAATTCTAGCTCTCTTCCA+TGG - chr1_1:57576054-57576073 None:intergenic 40.0%
AGCATGTGTGCATTTATCGT+AGG + chr1_1:57576078-57576097 Msa0031010:CDS 40.0%
CTTCCAACTCCATCATACAA+AGG - chr1_1:57576234-57576253 None:intergenic 40.0%
TGGAGTTGGAAGAAATGCTA+TGG + chr1_1:57576242-57576261 Msa0031010:CDS 40.0%
GGAGTTGGAAGAAATGCTAT+GGG + chr1_1:57576243-57576262 Msa0031010:CDS 40.0%
GAGTTGGAAGAAATGCTATG+GGG + chr1_1:57576244-57576263 Msa0031010:CDS 40.0%
GTACTCAAAGACTACTACCA+CGG - chr1_1:57576279-57576298 None:intergenic 40.0%
TTTCCCTAATCTGCAACACA+TGG - chr1_1:57576548-57576567 None:intergenic 40.0%
TGTTGCAGATTAGGGAAAGT+CGG + chr1_1:57576550-57576569 Msa0031010:intron 40.0%
TTTCTCTATTCCGTGACACA+TGG - chr1_1:57576766-57576785 None:intergenic 40.0%
AGCAGGACTCCAACAATTAT+GGG - chr1_1:57576943-57576962 None:intergenic 40.0%
TGTTTGATATGGCACGACAA+AGG + chr1_1:57577207-57577226 Msa0031010:CDS 40.0%
GCATGATTATTCGACCTGTT+TGG + chr1_1:57577273-57577292 Msa0031010:CDS 40.0%
AAACTTGCCAACTCTTTGGA+AGG + chr1_1:57577338-57577357 Msa0031010:CDS 40.0%
TTGGAAGGTCAGTTCAAAGA+CGG + chr1_1:57577353-57577372 Msa0031010:intron 40.0%
TGAAGCTCAATCAACAAGTG+AGG + chr1_1:57577531-57577550 Msa0031010:CDS 40.0%
ATGGTATAAACCAGCTTCCT+AGG + chr1_1:57577616-57577635 Msa0031010:intron 40.0%
TGGTATAAACCAGCTTCCTA+GGG + chr1_1:57577617-57577636 Msa0031010:intron 40.0%
TATTAGAAACCCTAGGAAGC+TGG - chr1_1:57577629-57577648 None:intergenic 40.0%
GAGCACAACATCAATGAAAG+TGG + chr1_1:57578049-57578068 Msa0031010:CDS 40.0%
TCTTAAGACACTTGCAGAGT+TGG - chr1_1:57578078-57578097 None:intergenic 40.0%
!! ATCCCTTGGTGATGCAAAAA+TGG + chr1_1:57578238-57578257 Msa0031010:CDS 40.0%
GGAAGTAATTCAAGTGGTCA+CGG + chr1_1:57578274-57578293 Msa0031010:CDS 40.0%
GAACTCAAAGCCTGTTTCAT+AGG + chr1_1:57579111-57579130 Msa0031010:intron 40.0%
! ACTCATACTCACCGACTATA+CGG + chr1_1:57579138-57579157 Msa0031010:intron 40.0%
TGGTATAGAGTCCGTATAGT+CGG - chr1_1:57579152-57579171 None:intergenic 40.0%
AAATCAAGGGAAGCTTCATC+GGG - chr1_1:57579235-57579254 None:intergenic 40.0%
CAAATCAAGGGAAGCTTCAT+CGG - chr1_1:57579236-57579255 None:intergenic 40.0%
! AGCTTCCCTTGATTTGAATG+AGG + chr1_1:57579240-57579259 Msa0031010:intron 40.0%
! GCTTCCCTTGATTTGAATGA+GGG + chr1_1:57579241-57579260 Msa0031010:intron 40.0%
! CTTCCCTTGATTTGAATGAG+GGG + chr1_1:57579242-57579261 Msa0031010:intron 40.0%
! TTCCCTTGATTTGAATGAGG+GGG + chr1_1:57579243-57579262 Msa0031010:intron 40.0%
GAGAAAAGAAAGCCCCTATT+TGG + chr1_1:57579285-57579304 Msa0031010:intron 40.0%
GGAGTTTAGTAGAAGATGAG+AGG - chr1_1:57579600-57579619 None:intergenic 40.0%
TACTCAGCACAATAAGTGAC+AGG + chr1_1:57579852-57579871 Msa0031010:intron 40.0%
!!! GCGTTGAACACCTGTTTTTT+AGG - chr1_1:57580200-57580219 None:intergenic 40.0%
TCTAGTGTCTTTCTCGTAGT+CGG - chr1_1:57580308-57580327 None:intergenic 40.0%
AATGGCCATATAGGTTATGG+GGG - chr1_1:57580573-57580592 None:intergenic 40.0%
AGGTTGTCAAATGGCCATAT+AGG - chr1_1:57580582-57580601 None:intergenic 40.0%
TGGAGAATCCAGGTAGAAGA+TGG + chr1_1:57570658-57570677 Msa0031010:CDS 45.0%
GAAATTCCAGCTCTCTTCCA+TGG - chr1_1:57570685-57570704 None:intergenic 45.0%
CTGGAATTTCTTGCAGCATG+TGG + chr1_1:57570695-57570714 Msa0031010:CDS 45.0%
GTAGTCTTTGAGTACACTGC+GGG + chr1_1:57570916-57570935 Msa0031010:CDS 45.0%
ATATGTGGAACTACCCTTGC+CGG + chr1_1:57571145-57571164 Msa0031010:CDS 45.0%
AGCAACCCAATGTACACCAA+AGG - chr1_1:57571179-57571198 None:intergenic 45.0%
! CATTGGGTTGCTAGTAAAGC+AGG + chr1_1:57571187-57571206 Msa0031010:CDS 45.0%
AGTGAGGCTCCAACAATTAC+AGG - chr1_1:57571226-57571245 None:intergenic 45.0%
!!! GGAGCCTCACTTTTTCTACT+AGG + chr1_1:57571235-57571254 Msa0031010:intron 45.0%
!! GTATTTACGTGTCGGTGTCA+TGG + chr1_1:57571406-57571425 Msa0031010:intron 45.0%
AAACTCGCCAACTCTTTGCA+AGG + chr1_1:57572038-57572057 Msa0031010:CDS 45.0%
! GTTAGACTCACTTGCTGCTT+GGG - chr1_1:57572237-57572256 None:intergenic 45.0%
! TGTTAGACTCACTTGCTGCT+TGG - chr1_1:57572238-57572257 None:intergenic 45.0%
AAATTGAAACGCCCATGAGC+AGG - chr1_1:57572475-57572494 None:intergenic 45.0%
ACCAGACCAACAGAATGATG+AGG + chr1_1:57573161-57573180 Msa0031010:CDS 45.0%
TCCTCATCATTCTGTTGGTC+TGG - chr1_1:57573165-57573184 None:intergenic 45.0%
AGACCAACAGAATGATGAGG+AGG + chr1_1:57573164-57573183 Msa0031010:CDS 45.0%
TTGCCTCCTCATCATTCTGT+TGG - chr1_1:57573170-57573189 None:intergenic 45.0%
TGCAAATCTGTCCCAATACG+AGG + chr1_1:57573555-57573574 Msa0031010:intron 45.0%
CTTTGGTTGCAATGTCAGAG+AGG - chr1_1:57574022-57574041 None:intergenic 45.0%
CTCTCTGACATTGCAACCAA+AGG + chr1_1:57574020-57574039 Msa0031010:intron 45.0%
! TTAGGGGCTGTTTGGTTTCA+AGG - chr1_1:57574105-57574124 None:intergenic 45.0%
TGAAACCAAACAGCCCCTAA+AGG + chr1_1:57574105-57574124 Msa0031010:intron 45.0%
! TTCATCCTTTAGGGGCTGTT+TGG - chr1_1:57574113-57574132 None:intergenic 45.0%
CTCAAACGCATTCAACCCTT+TGG - chr1_1:57574155-57574174 None:intergenic 45.0%
CAAAGGGTTGAATGCGTTTG+AGG + chr1_1:57574153-57574172 Msa0031010:intron 45.0%
TTTCTCTTAGGATCGTCGTG+CGG + chr1_1:57574260-57574279 Msa0031010:intron 45.0%
ACTCCGACATCAAGTTCAAG+TGG + chr1_1:57574704-57574723 Msa0031010:intron 45.0%
TCGGCTGGCGAAAGATATAT+AGG + chr1_1:57574754-57574773 Msa0031010:intron 45.0%
CGGCTGGCGAAAGATATATA+GGG + chr1_1:57574755-57574774 Msa0031010:intron 45.0%
GGCGAAAGATATATAGGGAG+AGG + chr1_1:57574760-57574779 Msa0031010:intron 45.0%
! TATGCTCTAAATGCGGGTGA+AGG + chr1_1:57574830-57574849 Msa0031010:intron 45.0%
! ATGCTCTAAATGCGGGTGAA+GGG + chr1_1:57574831-57574850 Msa0031010:intron 45.0%
CTTGGAAGGAAATACCTTCG+AGG + chr1_1:57574862-57574881 Msa0031010:intron 45.0%
! TTTGATGGTATCCACATCCG+TGG + chr1_1:57575253-57575272 Msa0031010:intron 45.0%
TCAAGGTAGAAGATGGTCCA+TGG + chr1_1:57576034-57576053 Msa0031010:intron 45.0%
TTTGAAGAAAGCTTGGGAGG+TGG + chr1_1:57576125-57576144 Msa0031010:CDS 45.0%
TTGAAGAAAGCTTGGGAGGT+GGG + chr1_1:57576126-57576145 Msa0031010:CDS 45.0%
TTGGAAGAAATGCTATGGGG+CGG + chr1_1:57576247-57576266 Msa0031010:CDS 45.0%
GTAGTCTTTGAGTACACTGC+TGG + chr1_1:57570916-57570935 Msa0031010:CDS 45.0%
ATATGTGGAACTACCCTTGC+CGG + chr1_1:57571145-57571164 Msa0031010:CDS 45.0%
AAAGGCTAGAAATCCGGCAA+GGG - chr1_1:57576878-57576897 None:intergenic 45.0%
TACGCCAAAGGCTAGAAATC+CGG - chr1_1:57576884-57576903 None:intergenic 45.0%
! TTCTAGCCTTTGGCGTACAT+TGG + chr1_1:57576887-57576906 Msa0031010:CDS 45.0%
! TCTAGCCTTTGGCGTACATT+GGG + chr1_1:57576888-57576907 Msa0031010:CDS 45.0%
! CATTGGGTTGCTAGTAAAGC+AGG + chr1_1:57571187-57571206 Msa0031010:CDS 45.0%
GAGCAGGACTCCAACAATTA+TGG - chr1_1:57576944-57576963 None:intergenic 45.0%
ATTATTCGACCTGTTTGGGC+TGG + chr1_1:57577278-57577297 Msa0031010:CDS 45.0%
AAGAGTTGGCAAGTTTGTCG+AGG - chr1_1:57577334-57577353 None:intergenic 45.0%
CGACAAACTTGCCAACTCTT+TGG + chr1_1:57577334-57577353 Msa0031010:CDS 45.0%
GAACTGACCTTCCAAAGAGT+TGG - chr1_1:57577348-57577367 None:intergenic 45.0%
AAGGTCAGTTCAAAGACGGA+AGG + chr1_1:57577357-57577376 Msa0031010:intron 45.0%
ACGAAAATTGAAGCGACCGT+GGG - chr1_1:57577748-57577767 None:intergenic 45.0%
! GCTTCAATTTTCGTCACCCA+TGG + chr1_1:57577754-57577773 Msa0031010:CDS 45.0%
TGAAGCACATCTACGCATTG+TGG - chr1_1:57577802-57577821 None:intergenic 45.0%
TACTGAAACTGTAGCTCGTG+TGG + chr1_1:57578310-57578329 Msa0031010:CDS 45.0%
! TGATTGTTGCTTCCTCATGC+TGG - chr1_1:57578448-57578467 None:intergenic 45.0%
! TGTGATGATTTGCAGACACG+TGG + chr1_1:57579040-57579059 Msa0031010:intron 45.0%
! GTGATGATTTGCAGACACGT+GGG + chr1_1:57579041-57579060 Msa0031010:intron 45.0%
! TGATGATTTGCAGACACGTG+GGG + chr1_1:57579042-57579061 Msa0031010:intron 45.0%
CTTCACTATCGCTCATGACT+TGG - chr1_1:57579172-57579191 None:intergenic 45.0%
! TCCCTTGATTTGAATGAGGG+GGG + chr1_1:57579244-57579263 Msa0031010:intron 45.0%
TCCCCCCTCATTCAAATCAA+GGG - chr1_1:57579248-57579267 None:intergenic 45.0%
TTCCCCCCTCATTCAAATCA+AGG - chr1_1:57579249-57579268 None:intergenic 45.0%
TAGAGCTCATGCCCAAATAG+GGG - chr1_1:57579300-57579319 None:intergenic 45.0%
CTAGAGCTCATGCCCAAATA+GGG - chr1_1:57579301-57579320 None:intergenic 45.0%
ACTAGAGCTCATGCCCAAAT+AGG - chr1_1:57579302-57579321 None:intergenic 45.0%
ACAAGCGTAAGACTCTACCT+GGG - chr1_1:57579731-57579750 None:intergenic 45.0%
TCTTCTCAGTCAATCCGTCA+TGG - chr1_1:57580125-57580144 None:intergenic 45.0%
ATGGCCATATAGGTTATGGG+GGG - chr1_1:57580572-57580591 None:intergenic 45.0%
!! TATAGATAATTAATTAATTA+AGG - chr1_1:57572612-57572631 None:intergenic 5.0%
!! TGTAAAATTAATAAATTATT+AGG - chr1_1:57572663-57572682 None:intergenic 5.0%
!! AAATAATATATAATATAGTA+AGG + chr1_1:57573881-57573900 Msa0031010:intron 5.0%
!! AATAATATATAATATAGTAA+GGG + chr1_1:57573882-57573901 Msa0031010:intron 5.0%
!!! AATATGATTTTAATAAATTT+TGG - chr1_1:57578187-57578206 None:intergenic 5.0%
!! TATAAATATACTTAATTATT+TGG - chr1_1:57578625-57578644 None:intergenic 5.0%
!! TATATAGTAAATATATTTAA+TGG - chr1_1:57578886-57578905 None:intergenic 5.0%
!! ATTTACTATATATTTATAAA+AGG + chr1_1:57578894-57578913 Msa0031010:intron 5.0%
!!! ATTTTTTAATATTGAAAAAT+GGG - chr1_1:57580426-57580445 None:intergenic 5.0%
!!! AATTTTTTAATATTGAAAAA+TGG - chr1_1:57580427-57580446 None:intergenic 5.0%
!!! TTTATTAAATTATTTTCAAA+AGG - chr1_1:57580602-57580621 None:intergenic 5.0%
!!! AAACAATTTTAATTTTTTTT+GGG - chr1_1:57580663-57580682 None:intergenic 5.0%
!!! AAAACAATTTTAATTTTTTT+TGG - chr1_1:57580664-57580683 None:intergenic 5.0%
TCCAGGTAGAAGATGGTCCA+TGG + chr1_1:57570665-57570684 Msa0031010:CDS 50.0%
TCCATGGACCATCTTCTACC+TGG - chr1_1:57570669-57570688 None:intergenic 50.0%
TATGTGGAACTACCCTTGCC+GGG + chr1_1:57571146-57571165 Msa0031010:CDS 50.0%
TACACCAAAGGCTAGAAGCC+CGG - chr1_1:57571167-57571186 None:intergenic 50.0%
!! TTACGTGTCGGTGTCATGGT+TGG + chr1_1:57571410-57571429 Msa0031010:intron 50.0%
CATGACTGTTCGCCCTGTTT+GGG + chr1_1:57571974-57571993 Msa0031010:CDS 50.0%
! GTTCTAGACCAGCCCAAACA+GGG - chr1_1:57571989-57572008 None:intergenic 50.0%
!! AGTTCTAGACCAGCCCAAAC+AGG - chr1_1:57571990-57572009 None:intergenic 50.0%
AAGAGTTGGCGAGTTTGTCG+AGG - chr1_1:57572034-57572053 None:intergenic 50.0%
CGCCAACTCTTTGCAAGGTT+AGG + chr1_1:57572043-57572062 Msa0031010:intron 50.0%
AACACGAGACAAGTGCCTTG+GGG - chr1_1:57573615-57573634 None:intergenic 50.0%
CAACACGAGACAAGTGCCTT+GGG - chr1_1:57573616-57573635 None:intergenic 50.0%
ACAACACGAGACAAGTGCCT+TGG - chr1_1:57573617-57573636 None:intergenic 50.0%
GGTTGCAATGTCAGAGAGGT+GGG - chr1_1:57574018-57574037 None:intergenic 50.0%
TGGTTGCAATGTCAGAGAGG+TGG - chr1_1:57574019-57574038 None:intergenic 50.0%
CTGACATTGCAACCAAAGGG+TGG + chr1_1:57574024-57574043 Msa0031010:intron 50.0%
TTCTCTTAGGATCGTCGTGC+GGG + chr1_1:57574261-57574280 Msa0031010:intron 50.0%
GAAGGGTTGCAAGACTTGGA+AGG + chr1_1:57574848-57574867 Msa0031010:intron 50.0%
GTTCTCAAATGGCTCCTCGA+AGG - chr1_1:57574879-57574898 None:intergenic 50.0%
!!! CTCGTGGCGGATTTTATCCA+CGG - chr1_1:57575163-57575182 None:intergenic 50.0%
GGTACAGATATCCACGGATG+TGG - chr1_1:57575267-57575286 None:intergenic 50.0%
GGCTCATGATGACAATGGAG+CGG + chr1_1:57575990-57576009 Msa0031010:intron 50.0%
CAAAGGCTAGAAATCCGGCA+AGG - chr1_1:57576879-57576898 None:intergenic 50.0%
!! CTTGCCGGATTTCTAGCCTT+TGG + chr1_1:57576877-57576896 Msa0031010:CDS 50.0%
AGCAACCCAATGTACGCCAA+AGG - chr1_1:57576896-57576915 None:intergenic 50.0%
GGAGTCCTGCTCTTTCTACT+AGG + chr1_1:57576952-57576971 Msa0031010:CDS 50.0%
!! AGTTCTAGACCAGCCCAAAC+AGG - chr1_1:57571990-57572009 None:intergenic 50.0%
GGCAAGTTTGTCGAGGTTTC+CGG - chr1_1:57577327-57577346 None:intergenic 50.0%
GACGAAAATTGAAGCGACCG+TGG - chr1_1:57577749-57577768 None:intergenic 50.0%
GATCGAACGTTGCTGCAGTT+CGG + chr1_1:57577935-57577954 Msa0031010:intron 50.0%
ACACGTGGGGTTCACTGAAA+GGG + chr1_1:57579055-57579074 Msa0031010:intron 50.0%
TTCACTGAAAGGGAGAGTGG+CGG + chr1_1:57579065-57579084 Msa0031010:intron 50.0%
AGCTTCATCGGGAAGGGATA+GGG - chr1_1:57579224-57579243 None:intergenic 50.0%
AAGCTTCATCGGGAAGGGAT+AGG - chr1_1:57579225-57579244 None:intergenic 50.0%
AAGGGAAGCTTCATCGGGAA+GGG - chr1_1:57579230-57579249 None:intergenic 50.0%
TTGAATGAGGGGGGAAGAGA+AGG + chr1_1:57579253-57579272 Msa0031010:intron 50.0%
CACAAGCGTAAGACTCTACC+TGG - chr1_1:57579732-57579751 None:intergenic 50.0%
GACACCCCCCATAACCTATA+TGG + chr1_1:57580565-57580584 Msa0031010:intron 50.0%
GATGGTCCATGGAAGAGAGC+TGG + chr1_1:57570676-57570695 Msa0031010:CDS 55.0%
AAAGGCTAGAAGCCCGGCAA+GGG - chr1_1:57571161-57571180 None:intergenic 55.0%
GCATGACTGTTCGCCCTGTT+TGG + chr1_1:57571973-57571992 Msa0031010:CDS 55.0%
CTAGATGGGAGCCTGCTCAT+GGG + chr1_1:57572461-57572480 Msa0031010:intron 55.0%
CTCGCTAAGCGCCTCGTATT+GGG - chr1_1:57573569-57573588 None:intergenic 55.0%
! CAATACGAGGCGCTTAGCGA+GGG + chr1_1:57573568-57573587 Msa0031010:intron 55.0%
! AATACGAGGCGCTTAGCGAG+GGG + chr1_1:57573569-57573588 Msa0031010:intron 55.0%
TGAGACAAGACAGGATGGGG+AGG + chr1_1:57574676-57574695 Msa0031010:intron 55.0%
GGGTGAAGGGTTGCAAGACT+TGG + chr1_1:57574844-57574863 Msa0031010:intron 55.0%
AATCCGCCACGAGTACAGAG+CGG + chr1_1:57575170-57575189 Msa0031010:intron 55.0%
TATCCGCTCTGTACTCGTGG+CGG - chr1_1:57575176-57575195 None:intergenic 55.0%
AGGTATCCGCTCTGTACTCG+TGG - chr1_1:57575179-57575198 None:intergenic 55.0%
TACAGAGCGGATACCTCCCA+TGG + chr1_1:57575183-57575202 Msa0031010:intron 55.0%
AAATTGAAGCGACCGTGGGC+AGG - chr1_1:57577744-57577763 None:intergenic 55.0%
GATCTTGCCAGACCAGCATG+AGG + chr1_1:57578433-57578452 Msa0031010:intron 55.0%
GTTGCTTCCTCATGCTGGTC+TGG - chr1_1:57578443-57578462 None:intergenic 55.0%
GACACGTGGGGTTCACTGAA+AGG + chr1_1:57579054-57579073 Msa0031010:intron 55.0%
GGGTTCACTGAAAGGGAGAG+TGG + chr1_1:57579062-57579081 Msa0031010:intron 55.0%
TCACTGAAAGGGAGAGTGGC+GGG + chr1_1:57579066-57579085 Msa0031010:intron 55.0%
!! ATAGGGATGGCGCATTGGCT+TGG - chr1_1:57579207-57579226 None:intergenic 55.0%
AAGGGATAGGGATGGCGCAT+TGG - chr1_1:57579212-57579231 None:intergenic 55.0%
TCATCGGGAAGGGATAGGGA+TGG - chr1_1:57579220-57579239 None:intergenic 55.0%
CAAGGGAAGCTTCATCGGGA+AGG - chr1_1:57579231-57579250 None:intergenic 55.0%
ACATTGACCTCTCGCAGACC+TGG + chr1_1:57579322-57579341 Msa0031010:intron 55.0%
TTGACTTCCAGGTCTGCGAG+AGG - chr1_1:57579332-57579351 None:intergenic 55.0%
CAAAGGCTAGAAGCCCGGCA+AGG - chr1_1:57571162-57571181 None:intergenic 60.0%
! CTTGCCGGGCTTCTAGCCTT+TGG + chr1_1:57571160-57571179 Msa0031010:CDS 60.0%
ACTGTTCGCCCTGTTTGGGC+TGG + chr1_1:57571978-57571997 Msa0031010:CDS 60.0%
GCTAGATGGGAGCCTGCTCA+TGG + chr1_1:57572460-57572479 Msa0031010:intron 60.0%
CCTCGCTAAGCGCCTCGTAT+TGG - chr1_1:57573570-57573589 None:intergenic 60.0%
! CCAATACGAGGCGCTTAGCG+AGG + chr1_1:57573567-57573586 Msa0031010:intron 60.0%
CTTAGCGAGGGGCTGTCAGA+TGG + chr1_1:57573580-57573599 Msa0031010:intron 60.0%
!! GGGCTGTCAGATGGTGGACT+GGG + chr1_1:57573589-57573608 Msa0031010:intron 60.0%
! CGTCGTGCGGGTTGTGAGAT+TGG + chr1_1:57574273-57574292 Msa0031010:intron 60.0%
!! CATTGGCTTGGTTGGCGGCT+TGG - chr1_1:57579195-57579214 None:intergenic 60.0%
!! TGGCGCATTGGCTTGGTTGG+CGG - chr1_1:57579200-57579219 None:intergenic 60.0%
!! GGATGGCGCATTGGCTTGGT+TGG - chr1_1:57579203-57579222 None:intergenic 60.0%
AGCGAGGGGCTGTCAGATGG+TGG + chr1_1:57573583-57573602 Msa0031010:intron 65.0%
!! GGGGCTGTCAGATGGTGGAC+TGG + chr1_1:57573588-57573607 Msa0031010:intron 65.0%
!! AGATGGTGGACTGGGCCCCA+AGG + chr1_1:57573597-57573616 Msa0031010:intron 65.0%
CTATGGGGCGGTCATGACCG+TGG + chr1_1:57576259-57576278 Msa0031010:intron 65.0%
GCAAGATGGGAGCCTGCCCA+CGG + chr1_1:57577729-57577748 Msa0031010:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 57570637 57580714 57570637 ID=Msa0031010;Name=Msa0031010
chr1_1 mRNA 57570637 57580714 57570637 ID=Msa0031010-mRNA-1;Parent=Msa0031010;Name=Msa0031010-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.94|0.41|0.22|18|0|793
chr1_1 exon 57570637 57570778 57570637 ID=Msa0031010-mRNA-1:exon:17396;Parent=Msa0031010-mRNA-1
chr1_1 exon 57570821 57570937 57570821 ID=Msa0031010-mRNA-1:exon:17397;Parent=Msa0031010-mRNA-1
chr1_1 exon 57571116 57571225 57571116 ID=Msa0031010-mRNA-1:exon:17398;Parent=Msa0031010-mRNA-1
chr1_1 exon 57571828 57572059 57571828 ID=Msa0031010-mRNA-1:exon:17399;Parent=Msa0031010-mRNA-1
chr1_1 exon 57572210 57572313 57572210 ID=Msa0031010-mRNA-1:exon:17400;Parent=Msa0031010-mRNA-1
chr1_1 exon 57572511 57572594 57572511 ID=Msa0031010-mRNA-1:exon:17401;Parent=Msa0031010-mRNA-1
chr1_1 exon 57572754 57572838 57572754 ID=Msa0031010-mRNA-1:exon:17402;Parent=Msa0031010-mRNA-1
chr1_1 exon 57572965 57573209 57572965 ID=Msa0031010-mRNA-1:exon:17403;Parent=Msa0031010-mRNA-1
chr1_1 exon 57576039 57576268 57576039 ID=Msa0031010-mRNA-1:exon:17404;Parent=Msa0031010-mRNA-1
chr1_1 exon 57576357 57576364 57576357 ID=Msa0031010-mRNA-1:exon:17405;Parent=Msa0031010-mRNA-1
chr1_1 exon 57576833 57576973 57576833 ID=Msa0031010-mRNA-1:exon:17406;Parent=Msa0031010-mRNA-1
chr1_1 exon 57577087 57577248 57577087 ID=Msa0031010-mRNA-1:exon:17407;Parent=Msa0031010-mRNA-1
chr1_1 exon 57577270 57577359 57577270 ID=Msa0031010-mRNA-1:exon:17408;Parent=Msa0031010-mRNA-1
chr1_1 exon 57577512 57577618 57577512 ID=Msa0031010-mRNA-1:exon:17409;Parent=Msa0031010-mRNA-1
chr1_1 exon 57577720 57577863 57577720 ID=Msa0031010-mRNA-1:exon:17410;Parent=Msa0031010-mRNA-1
chr1_1 exon 57578023 57578146 57578023 ID=Msa0031010-mRNA-1:exon:17411;Parent=Msa0031010-mRNA-1
chr1_1 exon 57578159 57578398 57578159 ID=Msa0031010-mRNA-1:exon:17412;Parent=Msa0031010-mRNA-1
chr1_1 exon 57580698 57580714 57580698 ID=Msa0031010-mRNA-1:exon:17413;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57570637 57570778 57570637 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57570821 57570937 57570821 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57571116 57571225 57571116 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57571828 57572059 57571828 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57572210 57572313 57572210 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57572511 57572594 57572511 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57572754 57572838 57572754 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57572965 57573209 57572965 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57576039 57576268 57576039 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57576357 57576364 57576357 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57576833 57576973 57576833 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57577087 57577248 57577087 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57577270 57577359 57577270 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57577512 57577618 57577512 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57577720 57577863 57577720 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57578023 57578146 57578023 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57578159 57578398 57578159 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
chr1_1 CDS 57580698 57580714 57580698 ID=Msa0031010-mRNA-1:cds;Parent=Msa0031010-mRNA-1
Gene Sequence

>Msa0031010

ATGACTAATGAAAAGGTAGAATGGAGAATCCAGGTAGAAGATGGTCCATGGAAGAGAGCTGGAATTTCTTGCAGCATGTGGGCATTTATTACAAGTCTTTATTCCAAGTTGTGCAAATTTGTGAAAAAAGCTTGGGAGATTGGAATAGCACTTACAGCTGTGTCACTTTTCTACTACTTGAAACCTTTATATGATGGTGTTGGAAGAAATGCTATGTGGGCTGTCATGACCGTGATTGTAGTCTTTGAGTACACTGCGGGTGCTACAATATACAAAAGTGTAAACAGAATATGTGGAACTACCCTTGCCGGGCTTCTAGCCTTTGGTGTACATTGGGTTGCTAGTAAAGCAGGAGATCAATGGGAACCTGCTCGTTTTGATTATGGTGCTATGATATTTATCCTCACTTTCAGTTTGGTTTCAATATCCGGTTATAGAATTGATGAATTGTTTGATTTGGCACGAACAAGAATTTCCACTATTATAATTGGAACTTCATTGTGCATAATCGTTAGCATGACTGTTCGCCCTGTTTGGGCTGGTCTAGAACTCTATGTTTTGGTCACGGGAAACCTCGACAAACTCGCCAACTCTTTGCAAGGTTGTGCAGCTCAGTATTTTGAATCCCAAGCAGCAAGTGAGTCTAACAAAAATTTGATGGGTTACAAGTGTGCGCTAAATTCCAAAGCAACAGAAGAATCATTGCAATATCTTAAAATTGGTGCTACAATGCGTAGATGTGCTTCTTGCATTGATGCTCTTATTGGTTGCATAAATTCAGAAAACAAGACCTCAGATGACATCATGAAGATTATGAGCAGAACCTCTATGAAAGTAGGTGACAACTCTGCAAATGTTTTAAGAGAGTTAGCAAGTGGTGATGCAAAACTCGAAATCCCAATAATAGAATTAATTCAAGTGGTCACAGTTGTTTCTTTGCTTACTGAAATTGTAGCTCGTGTGGAAGACATTGTGAAATGTGTTGAAGAATTATCAGATTTAGCTAAGTTCAAACCTGAAATGTCTAAATGTGACAAGACCAAACAACATTCAACAGACAACAAGATATCACCAGACCAACAGAATGATGAGGAGGCAAAAATCAAGACACTCCAGATGGTAGAAGATGGTCCATGGAAGAGAGCTAGAATTTCTTGCAGCATGTGTGCATTTATCGTAGGTCTTTATTTCAAGTTTTGCAAATTTTTGAAGAAAGCTTGGGAGGTGGGTATGAATGATCCAAGAAAATTCATCCATTGTTTAAAGGTAGGAATAGCACTTACGGCTGTCTCACTTTTCTACTACTTGAATCCTTTGTATGATGGAGTTGGAAGAAATGCTATGGGGCGGAGTAAGGGTTCTACTATATACAAAAGTATAAATAGAATATGTGGAACTACCCTTGCCGGATTTCTAGCCTTTGGCGTACATTGGGTTGCTAGTAAAGCAGGAAAGCAATTGGAACCCATAATTGTTGGAGTCCTGCTCTTTCTACTAGGTTCTGCAGCGACATTCTCAAGATTCATCCCAACCATAAAAGCTCGTTTTGATTATGGTGTTATGATATTTATCCTAACTTTCAGTTTGGTTTCAATATCTGGTTATCGAATTGATGAATTGTTTGATATGGCACGACAAAGGATTTCTACTATTATAATTGTTAGCATGATTATTCGACCTGTTTGGGCTGGTCTAGAACTCTATGTTTTAGTCACCGGAAACCTCGACAAACTTGCCAACTCTTTGGAAGGTTGTGTGGCTCAGTATTTTGAAGCTCAATCAACAAGTGAGGAGTCTAACAAAAATTTGATGGATTACAAGTGTGTGCTAAACTCCAAAGCAACAGAAGTATCAATGGCTAATTTAGCAAGATGGGAGCCTGCCCACGGTCGCTTCAATTTTCGTCACCCATGGAAGCAATATCTTAAAATTGGAGCCACAATGCGTAGATGTGCTTCATGTATTGATGCTCTTGTTGGATGTATAAATTCAGAAAACAAGTCCTCAGATGAAATCAAGAAGATTATGAGCACAACATCAATGAAAGTGGGAGCCAACTCTGCAAGTGTCTTAAGAGAGTTATCAATTACAATCAATAATATGACAAAGTCAAATAAACTTGATAAGATGAATATTGCTACACAAGAGCTCCAAAATTTATTAAAATCATATTCAAACACACACAATGTTAATGCAAAAGAAACATCCCTTGGTGATGCAAAAATGGAAATCCCAATAATGGAAGTAATTCAAGTGGTCACGGTAGTTTCTTTGCTTACTGAAACTGTAGCTCGTGTGGAAGACATTGTGAAAAGTGTTGAAGAATTATCAACATTAGCCAAGTTCAAAACAGAAATGTCCAAGTTTATTATTCATTATTAA
Protein sequence

>Msa0031010

MTNEKVEWRIQVEDGPWKRAGISCSMWAFITSLYSKLCKFVKKAWEIGIALTAVSLFYYLKPLYDGVGRNAMWAVMTVIVVFEYTAGATIYKSVNRICGTTLAGLLAFGVHWVASKAGDQWEPARFDYGAMIFILTFSLVSISGYRIDELFDLARTRISTIIIGTSLCIIVSMTVRPVWAGLELYVLVTGNLDKLANSLQGCAAQYFESQAASESNKNLMGYKCALNSKATEESLQYLKIGATMRRCASCIDALIGCINSENKTSDDIMKIMSRTSMKVGDNSANVLRELASGDAKLEIPIIELIQVVTVVSLLTEIVARVEDIVKCVEELSDLAKFKPEMSKCDKTKQHSTDNKISPDQQNDEEAKIKTLQMVEDGPWKRARISCSMCAFIVGLYFKFCKFLKKAWEVGMNDPRKFIHCLKVGIALTAVSLFYYLNPLYDGVGRNAMGRSKGSTIYKSINRICGTTLAGFLAFGVHWVASKAGKQLEPIIVGVLLFLLGSAATFSRFIPTIKARFDYGVMIFILTFSLVSISGYRIDELFDMARQRISTIIIVSMIIRPVWAGLELYVLVTGNLDKLANSLEGCVAQYFEAQSTSEESNKNLMDYKCVLNSKATEVSMANLARWEPAHGRFNFRHPWKQYLKIGATMRRCASCIDALVGCINSENKSSDEIKKIMSTTSMKVGANSASVLRELSITINNMTKSNKLDKMNIATQELQNLLKSYSNTHNVNAKETSLGDAKMEIPIMEVIQVVTVVSLLTETVARVEDIVKSVEELSTLAKFKTEMSKFIIHY*