Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0409490 | PNX80728.1 | 70.833 | 96 | 27 | 1 | 21 | 115 | 87 | 182 | 8.57e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0409490 | sp|Q6L438|R1A6_SOLDE | 47.692 | 65 | 33 | 1 | 52 | 115 | 774 | 838 | 1.14e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0409490 | A0A2K3LQB7 | 70.833 | 96 | 27 | 1 | 21 | 115 | 87 | 182 | 4.09e-35 | 133 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004990 | Msa0409490 | 0.800051 | 1.727708e-48 | -8.615850e-47 |
| Msa0005500 | Msa0409490 | -0.801905 | 7.221795e-49 | -8.615850e-47 |
| Msa0014590 | Msa0409490 | 0.808214 | 3.457407e-50 | -8.615850e-47 |
| Msa0021870 | Msa0409490 | 0.803906 | 2.787614e-49 | -8.615850e-47 |
| Msa0024650 | Msa0409490 | 0.806769 | 7.001825e-50 | -8.615850e-47 |
| Msa0027860 | Msa0409490 | 0.825349 | 4.919328e-54 | -8.615850e-47 |
| Msa0031010 | Msa0409490 | 0.808926 | 2.436489e-50 | -8.615850e-47 |
| Msa0031650 | Msa0409490 | 0.813569 | 2.395580e-51 | -8.615850e-47 |
| Msa0038010 | Msa0409490 | 0.834914 | 2.275281e-56 | -8.615850e-47 |
| Msa0046390 | Msa0409490 | 0.804347 | 2.256194e-49 | -8.615850e-47 |
| Msa0053040 | Msa0409490 | 0.800225 | 1.592640e-48 | -8.615850e-47 |
| Msa0059880 | Msa0409490 | 0.811219 | 7.809462e-51 | -8.615850e-47 |
| Msa0074620 | Msa0409490 | 0.849114 | 3.978886e-60 | -8.615850e-47 |
| Msa0080010 | Msa0409490 | 0.809086 | 2.251499e-50 | -8.615850e-47 |
| Msa0085710 | Msa0409490 | 0.826224 | 3.050440e-54 | -8.615850e-47 |
| Msa0093530 | Msa0409490 | 0.802892 | 4.522120e-49 | -8.615850e-47 |
| Msa0096860 | Msa0409490 | 0.806305 | 8.772831e-50 | -8.615850e-47 |
| Msa0098380 | Msa0409490 | 0.806117 | 9.612552e-50 | -8.615850e-47 |
| Msa0126960 | Msa0409490 | 0.802879 | 4.550144e-49 | -8.615850e-47 |
| Msa0129850 | Msa0409490 | 0.801837 | 7.456259e-49 | -8.615850e-47 |
| Msa0130350 | Msa0409490 | 0.800018 | 1.754686e-48 | -8.615850e-47 |
| Msa0130360 | Msa0409490 | 0.800069 | 1.713021e-48 | -8.615850e-47 |
| Msa0132250 | Msa0409490 | 0.817237 | 3.659849e-52 | -8.615850e-47 |
| Msa0136180 | Msa0409490 | -0.801251 | 9.834925e-49 | -8.615850e-47 |
| Msa0150910 | Msa0409490 | 0.808415 | 3.131711e-50 | -8.615850e-47 |
| Msa0154750 | Msa0409490 | 0.811489 | 6.825874e-51 | -8.615850e-47 |
| Msa0160580 | Msa0409490 | 0.831232 | 1.875448e-55 | -8.615850e-47 |
| Msa0163690 | Msa0409490 | 0.807648 | 4.560714e-50 | -8.615850e-47 |
| Msa0168010 | Msa0409490 | 0.803632 | 3.177487e-49 | -8.615850e-47 |
| Msa0170990 | Msa0409490 | 0.840564 | 8.061010e-58 | -8.615850e-47 |
| Msa0171740 | Msa0409490 | 0.819333 | 1.227448e-52 | -8.615850e-47 |
| Msa0175060 | Msa0409490 | 0.803623 | 3.191065e-49 | -8.615850e-47 |
| Msa0177550 | Msa0409490 | 0.844354 | 7.962993e-59 | -8.615850e-47 |
| Msa0186510 | Msa0409490 | -0.806932 | 6.469191e-50 | -8.615850e-47 |
| Msa0194230 | Msa0409490 | 0.818604 | 1.797347e-52 | -8.615850e-47 |
| Msa0202650 | Msa0409490 | 0.831470 | 1.639274e-55 | -8.615850e-47 |
| Msa0207640 | Msa0409490 | 0.810238 | 1.273054e-50 | -8.615850e-47 |
| Msa0212550 | Msa0409490 | 0.802621 | 5.142111e-49 | -8.615850e-47 |
| Msa0219060 | Msa0409490 | 0.809649 | 1.704935e-50 | -8.615850e-47 |
| Msa0364550 | Msa0409490 | 0.826563 | 2.533577e-54 | -8.615850e-47 |
| Msa0366510 | Msa0409490 | 0.826725 | 2.316994e-54 | -8.615850e-47 |
| Msa0370620 | Msa0409490 | 0.806103 | 9.679194e-50 | -8.615850e-47 |
| Msa0374040 | Msa0409490 | 0.835560 | 1.562662e-56 | -8.615850e-47 |
| Msa0385770 | Msa0409490 | -0.802898 | 4.509525e-49 | -8.615850e-47 |
| Msa0396700 | Msa0409490 | 0.836682 | 8.109099e-57 | -8.615850e-47 |
| Msa0401420 | Msa0409490 | 0.805778 | 1.132636e-49 | -8.615850e-47 |
| Msa0401440 | Msa0409490 | 0.815018 | 1.145873e-51 | -8.615850e-47 |
| Msa0409250 | Msa0409490 | 0.814132 | 1.800320e-51 | -8.615850e-47 |
| Msa0409490 | Msa0409500 | 0.844090 | 9.372901e-59 | -8.615850e-47 |
| Msa0409490 | Msa0409530 | 0.843132 | 1.691261e-58 | -8.615850e-47 |
| Msa0409490 | Msa0414480 | 0.858925 | 5.894213e-63 | -8.615850e-47 |
| Msa0409490 | Msa0418150 | 0.835990 | 1.216053e-56 | -8.615850e-47 |
| Msa0409490 | Msa0418160 | 0.833277 | 5.849087e-56 | -8.615850e-47 |
| Msa0409490 | Msa0436810 | 0.814827 | 1.263684e-51 | -8.615850e-47 |
| Msa0409490 | Msa0444230 | 0.813861 | 2.065595e-51 | -8.615850e-47 |
| Msa0409490 | Msa0444250 | 0.826282 | 2.955641e-54 | -8.615850e-47 |
| Msa0409490 | Msa0444400 | 0.806777 | 6.977135e-50 | -8.615850e-47 |
| Msa0409490 | Msa0445530 | 0.808612 | 2.843341e-50 | -8.615850e-47 |
| Msa0409490 | Msa0453970 | 0.813821 | 2.108477e-51 | -8.615850e-47 |
| Msa0409490 | Msa0454160 | 0.832685 | 8.208632e-56 | -8.615850e-47 |
| Msa0409490 | Msa0464300 | 0.834988 | 2.179858e-56 | -8.615850e-47 |
| Msa0409490 | Msa0464310 | 0.842832 | 2.031836e-58 | -8.615850e-47 |
| Msa0409490 | Msa0490060 | 0.817484 | 3.219168e-52 | -8.615850e-47 |
| Msa0409490 | Msa0491800 | 0.841969 | 3.441844e-58 | -8.615850e-47 |
| Msa0409490 | Msa0493710 | 0.805034 | 1.621880e-49 | -8.615850e-47 |
| Msa0409490 | Msa0497680 | 0.800827 | 1.200497e-48 | -8.615850e-47 |
| Msa0409490 | Msa0502940 | 0.858451 | 8.163348e-63 | -8.615850e-47 |
| Msa0409490 | Msa0502980 | 0.819763 | 9.791812e-53 | -8.615850e-47 |
| Msa0409490 | Msa0512280 | 0.800972 | 1.121514e-48 | -8.615850e-47 |
| Msa0409490 | Msa0515130 | 0.835397 | 1.718123e-56 | -8.615850e-47 |
| Msa0409490 | Msa0515150 | 0.816558 | 5.199043e-52 | -8.615850e-47 |
| Msa0409490 | Msa0529420 | 0.804422 | 2.176963e-49 | -8.615850e-47 |
| Msa0409490 | Msa0532670 | 0.808970 | 2.383923e-50 | -8.615850e-47 |
| Msa0409490 | Msa0533510 | 0.809255 | 2.070777e-50 | -8.615850e-47 |
| Msa0409490 | Msa0535570 | 0.826218 | 3.060900e-54 | -8.615850e-47 |
| Msa0409490 | Msa0538440 | 0.853404 | 2.443275e-61 | -8.615850e-47 |
| Msa0409490 | Msa0538450 | 0.849806 | 2.553124e-60 | -8.615850e-47 |
| Msa0409490 | Msa0538520 | 0.851129 | 1.084711e-60 | -8.615850e-47 |
| Msa0409490 | Msa0538530 | 0.846078 | 2.722978e-59 | -8.615850e-47 |
| Msa0409490 | Msa0545680 | 0.822322 | 2.520370e-53 | -8.615850e-47 |
| Msa0409490 | Msa0546760 | 0.818892 | 1.545839e-52 | -8.615850e-47 |
| Msa0409490 | Msa0554660 | 0.859400 | 4.246498e-63 | -8.615850e-47 |
| Msa0409490 | Msa0568920 | 0.815741 | 7.913419e-52 | -8.615850e-47 |
| Msa0409490 | Msa0587930 | 0.801543 | 8.567033e-49 | -8.615850e-47 |
| Msa0409490 | Msa0589720 | 0.818299 | 2.107168e-52 | -8.615850e-47 |
| Msa0409490 | Msa0589740 | 0.856338 | 3.442912e-62 | -8.615850e-47 |
| Msa0409490 | Msa0589750 | 0.811727 | 6.059426e-51 | -8.615850e-47 |
| Msa0409490 | Msa0591490 | 0.850250 | 1.917393e-60 | -8.615850e-47 |
| Msa0409490 | Msa0594320 | 0.833616 | 4.813703e-56 | -8.615850e-47 |
| Msa0409490 | Msa0594330 | 0.835753 | 1.396455e-56 | -8.615850e-47 |
| Msa0409490 | Msa0597800 | 0.827938 | 1.186569e-54 | -8.615850e-47 |
| Msa0409490 | Msa0597820 | 0.822882 | 1.867738e-53 | -8.615850e-47 |
| Msa0409490 | Msa0604280 | 0.844626 | 6.729912e-59 | -8.615850e-47 |
| Msa0409490 | Msa0630130 | 0.821156 | 4.688863e-53 | -8.615850e-47 |
| Msa0409490 | Msa0631700 | 0.817399 | 3.364208e-52 | -8.615850e-47 |
| Msa0409490 | Msa0633070 | 0.829661 | 4.542523e-55 | -8.615850e-47 |
| Msa0409490 | Msa0634290 | 0.838643 | 2.546063e-57 | -8.615850e-47 |
| Msa0409490 | Msa0639400 | 0.802066 | 6.692867e-49 | -8.615850e-47 |
| Msa0409490 | Msa0639410 | 0.814918 | 1.205965e-51 | -8.615850e-47 |
| Msa0409490 | Msa0640290 | 0.806322 | 8.704008e-50 | -8.615850e-47 |
| Msa0409490 | Msa0643840 | 0.813103 | 3.032041e-51 | -8.615850e-47 |
| Msa0409490 | Msa0645150 | 0.810576 | 1.076052e-50 | -8.615850e-47 |
| Msa0409490 | Msa0662230 | -0.800916 | 1.151113e-48 | -8.615850e-47 |
| Msa0409490 | Msa0668210 | 0.805437 | 1.335463e-49 | -8.615850e-47 |
| Msa0409490 | Msa0668220 | 0.808444 | 3.087854e-50 | -8.615850e-47 |
| Msa0409490 | Msa0670360 | 0.822102 | 2.834180e-53 | -8.615850e-47 |
| Msa0409490 | Msa0671490 | 0.816146 | 6.428545e-52 | -8.615850e-47 |
| Msa0409490 | Msa0671640 | 0.813862 | 2.064163e-51 | -8.615850e-47 |
| Msa0409490 | Msa0678620 | 0.811042 | 8.533960e-51 | -8.615850e-47 |
| Msa0409490 | Msa0682420 | 0.806204 | 9.215782e-50 | -8.615850e-47 |
| Msa0409490 | Msa0684620 | 0.841758 | 3.911741e-58 | -8.615850e-47 |
| Msa0409490 | Msa0685080 | 0.852529 | 4.349704e-61 | -8.615850e-47 |
| Msa0409490 | Msa0689840 | 0.806486 | 8.034958e-50 | -8.615850e-47 |
| Msa0409490 | Msa0708680 | 0.813100 | 3.036705e-51 | -8.615850e-47 |
| Msa0409490 | Msa0711230 | 0.823121 | 1.642232e-53 | -8.615850e-47 |
| Msa0409490 | Msa0711240 | 0.850656 | 1.474361e-60 | -8.615850e-47 |
| Msa0409490 | Msa0727480 | 0.819981 | 8.730999e-53 | -8.615850e-47 |
| Msa0409490 | Msa0728210 | 0.800103 | 1.686477e-48 | -8.615850e-47 |
| Msa0409490 | Msa0735130 | 0.838060 | 3.599238e-57 | -8.615850e-47 |
| Msa0409490 | Msa0735340 | 0.800584 | 1.346065e-48 | -8.615850e-47 |
| Msa0409490 | Msa0743380 | 0.813111 | 3.020442e-51 | -8.615850e-47 |
| Msa0409490 | Msa0747710 | 0.801870 | 7.340988e-49 | -8.615850e-47 |
| Msa0409490 | Msa0750790 | 0.804726 | 1.881086e-49 | -8.615850e-47 |
| Msa0409490 | Msa0768670 | 0.822875 | 1.873958e-53 | -8.615850e-47 |
| Msa0409490 | Msa0768720 | 0.802112 | 6.547057e-49 | -8.615850e-47 |
| Msa0409490 | Msa0776340 | 0.802037 | 6.785791e-49 | -8.615850e-47 |
| Msa0409490 | Msa0776540 | 0.803464 | 3.443654e-49 | -8.615850e-47 |
| Msa0409490 | Msa0776590 | -0.801924 | 7.158090e-49 | -8.615850e-47 |
| Msa0409490 | Msa0777070 | 0.806682 | 7.305053e-50 | -8.615850e-47 |
| Msa0409490 | Msa0789410 | 0.800129 | 1.665988e-48 | -8.615850e-47 |
| Msa0409490 | Msa0792330 | 0.816028 | 6.829490e-52 | -8.615850e-47 |
| Msa0409490 | Msa0798150 | 0.801405 | 9.147093e-49 | -8.615850e-47 |
| Msa0409490 | Msa0803310 | 0.801875 | 7.323141e-49 | -8.615850e-47 |
| Msa0409490 | Msa0814660 | 0.828438 | 8.988780e-55 | -8.615850e-47 |
| Msa0409490 | Msa0814670 | 0.804087 | 2.555962e-49 | -8.615850e-47 |
| Msa0409490 | Msa0816140 | 0.808983 | 2.368112e-50 | -8.615850e-47 |
| Msa0409490 | Msa0824850 | 0.808547 | 2.936077e-50 | -8.615850e-47 |
| Msa0409490 | Msa0824860 | 0.831421 | 1.684997e-55 | -8.615850e-47 |
| Msa0409490 | Msa0841930 | 0.810288 | 1.241700e-50 | -8.615850e-47 |
| Msa0409490 | Msa0847140 | 0.805486 | 1.304293e-49 | -8.615850e-47 |
| Msa0409490 | Msa0854380 | 0.803359 | 3.619498e-49 | -8.615850e-47 |
| Msa0409490 | Msa0855270 | 0.841936 | 3.511236e-58 | -8.615850e-47 |
| Msa0409490 | Msa0863840 | 0.826239 | 3.025955e-54 | -8.615850e-47 |
| Msa0409490 | Msa0863850 | 0.821316 | 4.307996e-53 | -8.615850e-47 |
| Msa0409490 | Msa0863860 | 0.800010 | 1.761177e-48 | -8.615850e-47 |
| Msa0409490 | Msa0868870 | 0.802451 | 5.575960e-49 | -8.615850e-47 |
| Msa0409490 | Msa0883640 | 0.815838 | 7.528311e-52 | -8.615850e-47 |
| Msa0409490 | Msa0890210 | 0.827137 | 1.846953e-54 | -8.615850e-47 |
| Msa0409490 | Msa0896910 | 0.811749 | 5.991524e-51 | -8.615850e-47 |
| Msa0409490 | Msa0896920 | 0.890473 | 9.548054e-74 | -8.615850e-47 |
| Msa0409490 | Msa0896950 | 0.824172 | 9.322355e-54 | -8.615850e-47 |
| Msa0409490 | Msa0902340 | 0.821766 | 3.390831e-53 | -8.615850e-47 |
| Msa0409490 | Msa0910830 | 0.818844 | 1.585325e-52 | -8.615850e-47 |
| Msa0409490 | Msa0932900 | 0.829145 | 6.062377e-55 | -8.615850e-47 |
| Msa0409490 | Msa0932910 | 0.814627 | 1.399125e-51 | -8.615850e-47 |
| Msa0409490 | Msa0932930 | 0.814586 | 1.428535e-51 | -8.615850e-47 |
| Msa0409490 | Msa0933590 | 0.803100 | 4.095636e-49 | -8.615850e-47 |
| Msa0409490 | Msa0933610 | 0.841815 | 3.778738e-58 | -8.615850e-47 |
| Msa0409490 | Msa0937160 | -0.801579 | 8.423048e-49 | -8.615850e-47 |
| Msa0409490 | Msa0941120 | 0.844906 | 5.656538e-59 | -8.615850e-47 |
| Msa0409490 | Msa0950090 | 0.814933 | 1.197066e-51 | -8.615850e-47 |
| Msa0409490 | Msa0960090 | 0.817714 | 2.857630e-52 | -8.615850e-47 |
| Msa0409490 | Msa0962290 | 0.817645 | 2.961348e-52 | -8.615850e-47 |
| Msa0409490 | Msa0962320 | 0.827745 | 1.320268e-54 | -8.615850e-47 |
| Msa0409490 | Msa0964510 | 0.829529 | 4.891160e-55 | -8.615850e-47 |
| Msa0409490 | Msa0970790 | 0.829438 | 5.147765e-55 | -8.615850e-47 |
| Msa0409490 | Msa0974410 | -0.802024 | 6.826538e-49 | -8.615850e-47 |
| Msa0409490 | Msa0975950 | 0.802462 | 5.547574e-49 | -8.615850e-47 |
| Msa0409490 | Msa0985700 | 0.817245 | 3.643685e-52 | -8.615850e-47 |
| Msa0409490 | Msa0996980 | 0.857071 | 2.095083e-62 | -8.615850e-47 |
| Msa0409490 | Msa0996990 | 0.831118 | 2.000429e-55 | -8.615850e-47 |
| Msa0409490 | Msa1005370 | 0.800010 | 1.761345e-48 | -8.615850e-47 |
| Msa0409490 | Msa1006030 | 0.819418 | 1.173673e-52 | -8.615850e-47 |
| Msa0409490 | Msa1006170 | 0.820644 | 6.151127e-53 | -8.615850e-47 |
| Msa0409490 | Msa1021620 | 0.807874 | 4.083197e-50 | -8.615850e-47 |
| Msa0409490 | Msa1022490 | 0.802548 | 5.323742e-49 | -8.615850e-47 |
| Msa0409490 | Msa1022510 | 0.813128 | 2.994693e-51 | -8.615850e-47 |
| Msa0409490 | Msa1024350 | 0.822340 | 2.496662e-53 | -8.615850e-47 |
| Msa0409490 | Msa1024480 | 0.810601 | 1.063046e-50 | -8.615850e-47 |
| Msa0409490 | Msa1026050 | 0.834465 | 2.950471e-56 | -8.615850e-47 |
| Msa0409490 | Msa1037530 | 0.812123 | 4.967132e-51 | -8.615850e-47 |
| Msa0409490 | Msa1046220 | 0.809799 | 1.582381e-50 | -8.615850e-47 |
| Msa0409490 | Msa1047300 | 0.803095 | 4.105497e-49 | -8.615850e-47 |
| Msa0409490 | Msa1047340 | 0.802202 | 6.274591e-49 | -8.615850e-47 |
| Msa0409490 | Msa1048350 | 0.818955 | 1.496329e-52 | -8.615850e-47 |
| Msa0409490 | Msa1048390 | 0.829136 | 6.093212e-55 | -8.615850e-47 |
| Msa0409490 | Msa1061670 | 0.871088 | 8.917738e-67 | -8.615850e-47 |
| Msa0409490 | Msa1063260 | 0.810686 | 1.018770e-50 | -8.615850e-47 |
| Msa0409490 | Msa1064940 | 0.850014 | 2.232647e-60 | -8.615850e-47 |
| Msa0409490 | Msa1085820 | 0.801498 | 8.751938e-49 | -8.615850e-47 |
| Msa0409490 | Msa1087370 | 0.815207 | 1.040728e-51 | -8.615850e-47 |
| Msa0409490 | Msa1087380 | 0.852807 | 3.623177e-61 | -8.615850e-47 |
| Msa0409490 | Msa1098100 | 0.804021 | 2.638283e-49 | -8.615850e-47 |
| Msa0409490 | Msa1100330 | 0.834535 | 2.833172e-56 | -8.615850e-47 |
| Msa0409490 | Msa1104960 | 0.803947 | 2.732987e-49 | -8.615850e-47 |
| Msa0409490 | Msa1106680 | 0.835439 | 1.677309e-56 | -8.615850e-47 |
| Msa0409490 | Msa1106960 | 0.859451 | 4.099315e-63 | -8.615850e-47 |
| Msa0409490 | Msa1109540 | 0.801414 | 9.107946e-49 | -8.615850e-47 |
| Msa0409490 | Msa1109880 | 0.824148 | 9.444910e-54 | -8.615850e-47 |
| Msa0409490 | Msa1109890 | 0.824536 | 7.655212e-54 | -8.615850e-47 |
| Msa0409490 | Msa1112630 | 0.806339 | 8.629396e-50 | -8.615850e-47 |
| Msa0409490 | Msa1115900 | 0.809536 | 1.802408e-50 | -8.615850e-47 |
| Msa0409490 | Msa1124220 | 0.807520 | 4.855062e-50 | -8.615850e-47 |
| Msa0409490 | Msa1130410 | 0.807845 | 4.142637e-50 | -8.615850e-47 |
| Msa0409490 | Msa1138110 | 0.830271 | 3.225689e-55 | -8.615850e-47 |
| Msa0409490 | Msa1147030 | 0.803661 | 3.133836e-49 | -8.615850e-47 |
| Msa0409490 | Msa1148210 | 0.815726 | 7.976550e-52 | -8.615850e-47 |
| Msa0409490 | Msa1150760 | 0.800517 | 1.389083e-48 | -8.615850e-47 |
| Msa0409490 | Msa1152180 | 0.819255 | 1.278759e-52 | -8.615850e-47 |
| Msa0409490 | Msa1152330 | 0.802660 | 5.049825e-49 | -8.615850e-47 |
| Msa0409490 | Msa1153690 | 0.819620 | 1.055486e-52 | -8.615850e-47 |
| Msa0409490 | Msa1162370 | 0.802730 | 4.883608e-49 | -8.615850e-47 |
| Msa0409490 | Msa1170340 | 0.810215 | 1.287546e-50 | -8.615850e-47 |
| Msa0409490 | Msa1173290 | 0.833005 | 6.836225e-56 | -8.615850e-47 |
| Msa0409490 | Msa1177090 | 0.814412 | 1.561081e-51 | -8.615850e-47 |
| Msa0409490 | Msa1181680 | 0.807539 | 4.810867e-50 | -8.615850e-47 |
| Msa0409490 | Msa1182960 | -0.807866 | 4.099971e-50 | -8.615850e-47 |
| Msa0409490 | Msa1186340 | 0.801459 | 8.916698e-49 | -8.615850e-47 |
| Msa0409490 | Msa1190090 | 0.821320 | 4.298061e-53 | -8.615850e-47 |
| Msa0409490 | Msa1191270 | 0.810092 | 1.368526e-50 | -8.615850e-47 |
| Msa0409490 | Msa1191350 | 0.811947 | 5.426574e-51 | -8.615850e-47 |
| Msa0409490 | Msa1206330 | 0.806138 | 9.513340e-50 | -8.615850e-47 |
| Msa0409490 | Msa1206380 | 0.807792 | 4.251081e-50 | -8.615850e-47 |
| Msa0409490 | Msa1208830 | 0.806619 | 7.532188e-50 | -8.615850e-47 |
| Msa0409490 | Msa1208910 | 0.800138 | 1.658924e-48 | -8.615850e-47 |
| Msa0409490 | Msa1214960 | 0.800413 | 1.457997e-48 | -8.615850e-47 |
| Msa0409490 | Msa1223710 | 0.800073 | 1.710398e-48 | -8.615850e-47 |
| Msa0409490 | Msa1238250 | 0.813993 | 1.931821e-51 | -8.615850e-47 |
| Msa0409490 | Msa1258020 | 0.805513 | 1.287529e-49 | -8.615850e-47 |
| Msa0409490 | Msa1263370 | 0.801369 | 9.300354e-49 | -8.615850e-47 |
| Msa0409490 | Msa1267990 | 0.810877 | 9.264822e-51 | -8.615850e-47 |
| Msa0409490 | Msa1273320 | 0.819116 | 1.374726e-52 | -8.615850e-47 |
| Msa0409490 | Msa1294020 | 0.816557 | 5.200281e-52 | -8.615850e-47 |
| Msa0409490 | Msa1296490 | 0.802188 | 6.314681e-49 | -8.615850e-47 |
| Msa0409490 | Msa1300570 | 0.812065 | 5.114140e-51 | -8.615850e-47 |
| Msa0409490 | Msa1316960 | 0.801100 | 1.055765e-48 | -8.615850e-47 |
| Msa0409490 | Msa1319030 | 0.822637 | 2.129595e-53 | -8.615850e-47 |
| Msa0409490 | Msa1319190 | 0.814928 | 1.199837e-51 | -8.615850e-47 |
| Msa0409490 | Msa1320160 | 0.812802 | 3.529078e-51 | -8.615850e-47 |
| Msa0409490 | Msa1321250 | 0.801438 | 9.005859e-49 | -8.615850e-47 |
| Msa0409490 | Msa1321970 | 0.814601 | 1.418043e-51 | -8.615850e-47 |
| Msa0409490 | Msa1323150 | 0.821759 | 3.402734e-53 | -8.615850e-47 |
| Msa0409490 | Msa1341030 | 0.809208 | 2.119311e-50 | -8.615850e-47 |
| Msa0409490 | Msa1349420 | 0.806375 | 8.482735e-50 | -8.615850e-47 |
| Msa0409490 | Msa1355330 | 0.834901 | 2.292237e-56 | -8.615850e-47 |
| Msa0409490 | Msa1355340 | 0.840740 | 7.247304e-58 | -8.615850e-47 |
| Msa0409490 | Msa1357840 | 0.839734 | 1.327162e-57 | -8.615850e-47 |
| Msa0409490 | Msa1373560 | 0.811279 | 7.581874e-51 | -8.615850e-47 |
| Msa0409490 | Msa1380740 | 0.811188 | 7.934148e-51 | -8.615850e-47 |
| Msa0409490 | Msa1401650 | 0.800873 | 1.174753e-48 | -8.615850e-47 |
| Msa0409490 | Msa1411550 | 0.836743 | 7.826371e-57 | -8.615850e-47 |
| Msa0409490 | Msa1417220 | 0.802421 | 5.656777e-49 | -8.615850e-47 |
| Msa0409490 | Msa1446090 | 0.824392 | 8.273665e-54 | -8.615850e-47 |
| Msa0409490 | Msa1448150 | 0.804973 | 1.670434e-49 | -8.615850e-47 |
| Msa0409490 | Msa1451690 | -0.802431 | 5.629217e-49 | -8.615850e-47 |
| Msa0409490 | Msa1456600 | 0.852967 | 3.260816e-61 | -8.615850e-47 |
| Msa0409490 | Msa1458270 | 0.803908 | 2.785145e-49 | -8.615850e-47 |
| Msa0409490 | Msa1459610 | 0.824885 | 6.331959e-54 | -8.615850e-47 |
| Msa0245660 | Msa0409490 | 0.872747 | 2.507405e-67 | -8.615850e-47 |
| Msa0248320 | Msa0409490 | 0.803529 | 3.337137e-49 | -8.615850e-47 |
| Msa0252930 | Msa0409490 | 0.803190 | 3.924011e-49 | -8.615850e-47 |
| Msa0266640 | Msa0409490 | 0.812576 | 3.954323e-51 | -8.615850e-47 |
| Msa0266650 | Msa0409490 | 0.801047 | 1.082552e-48 | -8.615850e-47 |
| Msa0274250 | Msa0409490 | 0.826501 | 2.619968e-54 | -8.615850e-47 |
| Msa0274260 | Msa0409490 | 0.840912 | 6.533795e-58 | -8.615850e-47 |
| Msa0278460 | Msa0409490 | 0.812299 | 4.545971e-51 | -8.615850e-47 |
| Msa0278950 | Msa0409490 | 0.821122 | 4.774539e-53 | -8.615850e-47 |
| Msa0285580 | Msa0409490 | 0.814140 | 1.792616e-51 | -8.615850e-47 |
| Msa0311540 | Msa0409490 | 0.808680 | 2.749166e-50 | -8.615850e-47 |
| Msa0314440 | Msa0409490 | 0.812662 | 3.787955e-51 | -8.615850e-47 |
| Msa0322460 | Msa0409490 | 0.865702 | 4.874450e-65 | -8.615850e-47 |
| Msa0346170 | Msa0409490 | 0.817102 | 3.923887e-52 | -8.615850e-47 |
| Msa0348370 | Msa0409490 | 0.817269 | 3.599734e-52 | -8.615850e-47 |
| Msa0349890 | Msa0409490 | 0.823896 | 1.081942e-53 | -8.615850e-47 |
| Msa0354550 | Msa0409490 | 0.804985 | 1.660839e-49 | -8.615850e-47 |
| Msa0356200 | Msa0409490 | 0.818328 | 2.075815e-52 | -8.615850e-47 |
| Msa0356240 | Msa0409490 | 0.809056 | 2.284852e-50 | -8.615850e-47 |
| Msa0356250 | Msa0409490 | 0.807715 | 4.413458e-50 | -8.615850e-47 |
| Msa0356380 | Msa0409490 | 0.806706 | 7.219820e-50 | -8.615850e-47 |
| Msa0356410 | Msa0409490 | 0.814783 | 1.291995e-51 | -8.615850e-47 |
| Msa0357470 | Msa0409490 | 0.824865 | 6.402663e-54 | -8.615850e-47 |
| Msa0357510 | Msa0409490 | 0.820665 | 6.081820e-53 | -8.615850e-47 |
| Msa0357530 | Msa0409490 | 0.819464 | 1.145791e-52 | -8.615850e-47 |
| Msa0361700 | Msa0409490 | 0.860492 | 1.988718e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0409490 | MtrunA17_Chr3g0101331 | 70.103 | 97 | 28 | 1 | 20 | 115 | 412 | 508 | 4.32e-38 | 135 |
| Msa0409490 | MtrunA17_Chr3g0112511 | 65.979 | 97 | 32 | 1 | 20 | 115 | 395 | 491 | 2.10e-36 | 130 |
| Msa0409490 | MtrunA17_Chr3g0100831 | 66.667 | 96 | 31 | 1 | 21 | 115 | 400 | 495 | 2.36e-36 | 130 |
| Msa0409490 | MtrunA17_Chr1g0189321 | 64.948 | 97 | 27 | 2 | 23 | 115 | 1 | 94 | 5.44e-36 | 123 |
| Msa0409490 | MtrunA17_Chr3g0100731 | 64.646 | 99 | 28 | 2 | 21 | 115 | 160 | 255 | 1.82e-35 | 127 |
| Msa0409490 | MtrunA17_Chr3g0100681 | 65.625 | 96 | 32 | 1 | 21 | 115 | 218 | 313 | 4.50e-35 | 126 |
| Msa0409490 | MtrunA17_Chr3g0100971 | 64.583 | 96 | 33 | 1 | 21 | 115 | 402 | 497 | 1.94e-34 | 125 |
| Msa0409490 | MtrunA17_Chr3g0100961 | 63.542 | 96 | 34 | 1 | 21 | 115 | 405 | 500 | 2.56e-34 | 124 |
| Msa0409490 | MtrunA17_Chr3g0101391 | 65.625 | 96 | 32 | 1 | 21 | 115 | 87 | 182 | 8.77e-34 | 122 |
| Msa0409490 | MtrunA17_Chr3g0100851 | 60.417 | 96 | 37 | 1 | 21 | 115 | 281 | 376 | 2.04e-33 | 122 |
| Msa0409490 | MtrunA17_Chr3g0100761 | 62.500 | 96 | 35 | 1 | 21 | 115 | 362 | 457 | 6.64e-33 | 120 |
| Msa0409490 | MtrunA17_Chr1g0189351 | 62.887 | 97 | 35 | 1 | 20 | 115 | 401 | 497 | 5.07e-32 | 118 |
| Msa0409490 | MtrunA17_Chr3g0100801 | 82.812 | 64 | 11 | 0 | 52 | 115 | 393 | 456 | 2.80e-31 | 115 |
| Msa0409490 | MtrunA17_Chr3g0101321 | 61.458 | 96 | 36 | 1 | 21 | 115 | 397 | 492 | 4.00e-31 | 115 |
| Msa0409490 | MtrunA17_Chr1g0189271 | 64.286 | 84 | 29 | 1 | 20 | 102 | 241 | 324 | 3.63e-29 | 107 |
| Msa0409490 | MtrunA17_Chr1g0149071 | 61.458 | 96 | 20 | 1 | 20 | 115 | 122 | 200 | 3.73e-29 | 108 |
| Msa0409490 | MtrunA17_Chr3g0101251 | 60.825 | 97 | 34 | 2 | 20 | 115 | 368 | 461 | 2.11e-28 | 107 |
| Msa0409490 | MtrunA17_Chr3g0101171 | 68.493 | 73 | 22 | 1 | 43 | 115 | 1 | 72 | 2.18e-28 | 99.8 |
| Msa0409490 | MtrunA17_Chr1g0151481 | 54.082 | 98 | 40 | 2 | 21 | 115 | 408 | 503 | 2.68e-28 | 107 |
| Msa0409490 | MtrunA17_Chr3g0080791 | 54.639 | 97 | 43 | 1 | 20 | 115 | 406 | 502 | 1.42e-27 | 105 |
| Msa0409490 | MtrunA17_Chr3g0080771 | 54.639 | 97 | 43 | 1 | 20 | 115 | 406 | 502 | 1.74e-27 | 105 |
| Msa0409490 | MtrunA17_Chr3g0094301 | 51.546 | 97 | 46 | 1 | 20 | 115 | 406 | 502 | 5.79e-26 | 100 |
| Msa0409490 | MtrunA17_Chr7g0229761 | 51.546 | 97 | 46 | 1 | 20 | 115 | 406 | 502 | 5.79e-26 | 100 |
| Msa0409490 | MtrunA17_Chr3g0081391 | 51.546 | 97 | 46 | 1 | 20 | 115 | 405 | 501 | 1.44e-25 | 99.8 |
| Msa0409490 | MtrunA17_Chr3g0080741 | 50.515 | 97 | 47 | 1 | 20 | 115 | 408 | 504 | 1.59e-25 | 99.8 |
| Msa0409490 | MtrunA17_Chr3g0101221 | 53.608 | 97 | 42 | 2 | 20 | 115 | 407 | 501 | 4.67e-25 | 98.2 |
| Msa0409490 | MtrunA17_Chr3g0101181 | 56.701 | 97 | 38 | 2 | 20 | 115 | 412 | 505 | 5.04e-25 | 98.2 |
| Msa0409490 | MtrunA17_Chr3g0101211 | 55.670 | 97 | 40 | 2 | 20 | 115 | 194 | 288 | 6.80e-25 | 97.1 |
| Msa0409490 | MtrunA17_Chr3g0080601 | 54.639 | 97 | 43 | 1 | 20 | 115 | 405 | 501 | 6.96e-25 | 97.8 |
| Msa0409490 | MtrunA17_Chr3g0081361 | 48.515 | 101 | 47 | 2 | 18 | 115 | 408 | 506 | 9.80e-25 | 97.4 |
| Msa0409490 | MtrunA17_Chr3g0080731 | 49.485 | 97 | 48 | 1 | 20 | 115 | 406 | 502 | 2.43e-24 | 96.3 |
| Msa0409490 | MtrunA17_Chr3g0084351 | 51.546 | 97 | 46 | 1 | 20 | 115 | 331 | 427 | 4.49e-24 | 95.5 |
| Msa0409490 | MtrunA17_Chr3g0101201 | 53.608 | 97 | 42 | 2 | 20 | 115 | 405 | 499 | 4.70e-24 | 95.5 |
| Msa0409490 | MtrunA17_Chr3g0101011 | 50.538 | 93 | 45 | 1 | 20 | 111 | 418 | 510 | 5.09e-24 | 95.5 |
| Msa0409490 | MtrunA17_Chr3g0080751 | 52.000 | 100 | 42 | 3 | 20 | 115 | 406 | 503 | 1.10e-23 | 94.4 |
| Msa0409490 | MtrunA17_Chr3g0080651 | 50.549 | 91 | 44 | 1 | 20 | 109 | 324 | 414 | 1.68e-23 | 94.0 |
| Msa0409490 | MtrunA17_Chr3g0080721 | 52.747 | 91 | 42 | 1 | 20 | 109 | 144 | 234 | 1.87e-23 | 93.6 |
| Msa0409490 | MtrunA17_Chr3g0081371 | 49.485 | 97 | 48 | 1 | 20 | 115 | 410 | 506 | 2.12e-23 | 93.6 |
| Msa0409490 | MtrunA17_Chr3g0081211 | 50.549 | 91 | 44 | 1 | 26 | 115 | 410 | 500 | 2.92e-23 | 93.2 |
| Msa0409490 | MtrunA17_Chr3g0081341 | 49.485 | 97 | 48 | 1 | 20 | 115 | 469 | 565 | 4.16e-23 | 92.8 |
| Msa0409490 | MtrunA17_Chr5g0444301 | 75.439 | 57 | 14 | 0 | 59 | 115 | 1 | 57 | 1.27e-22 | 90.9 |
| Msa0409490 | MtrunA17_Chr3g0081191 | 46.000 | 100 | 51 | 2 | 18 | 115 | 399 | 497 | 6.16e-22 | 89.4 |
| Msa0409490 | MtrunA17_Chr3g0101241 | 50.515 | 97 | 44 | 2 | 20 | 115 | 381 | 474 | 1.10e-20 | 85.9 |
| Msa0409490 | MtrunA17_Chr3g0101271 | 50.515 | 97 | 44 | 2 | 20 | 115 | 381 | 474 | 1.19e-20 | 85.9 |
| Msa0409490 | MtrunA17_Chr3g0100701 | 81.250 | 48 | 9 | 0 | 68 | 115 | 283 | 330 | 2.67e-20 | 84.7 |
| Msa0409490 | MtrunA17_Chr3g0101231 | 67.188 | 64 | 21 | 0 | 52 | 115 | 442 | 505 | 5.25e-20 | 84.0 |
| Msa0409490 | MtrunA17_Chr3g0081181 | 48.000 | 100 | 44 | 3 | 20 | 115 | 390 | 485 | 1.93e-19 | 82.4 |
| Msa0409490 | MtrunA17_Chr5g0410021 | 43.478 | 92 | 51 | 1 | 25 | 115 | 392 | 483 | 8.60e-17 | 74.7 |
| Msa0409490 | MtrunA17_Chr5g0410031 | 39.583 | 96 | 55 | 2 | 22 | 115 | 393 | 487 | 9.96e-17 | 74.7 |
| Msa0409490 | MtrunA17_Chr5g0409971 | 43.478 | 92 | 51 | 1 | 25 | 115 | 395 | 486 | 2.68e-16 | 73.2 |
| Msa0409490 | MtrunA17_Chr5g0410001 | 39.175 | 97 | 54 | 2 | 22 | 115 | 392 | 486 | 2.84e-16 | 73.2 |
| Msa0409490 | MtrunA17_Chr5g0409991 | 43.478 | 92 | 51 | 1 | 25 | 115 | 390 | 481 | 1.45e-15 | 71.2 |
| Msa0409490 | MtrunA17_Chr5g0404741 | 48.333 | 60 | 31 | 0 | 52 | 111 | 421 | 480 | 3.40e-14 | 67.4 |
| Msa0409490 | MtrunA17_Chr4g0037421 | 42.188 | 64 | 37 | 0 | 52 | 115 | 482 | 545 | 3.38e-13 | 64.3 |
| Msa0409490 | MtrunA17_Chr3g0100791 | 80.000 | 35 | 7 | 0 | 81 | 115 | 1 | 35 | 1.83e-12 | 62.4 |
| Msa0409490 | MtrunA17_Chr3g0080631 | 55.556 | 54 | 24 | 0 | 62 | 115 | 404 | 457 | 5.35e-12 | 61.2 |
| Msa0409490 | MtrunA17_Chr3g0101361 | 75.000 | 36 | 9 | 0 | 80 | 115 | 295 | 330 | 1.74e-11 | 59.7 |
| Msa0409490 | MtrunA17_Chr7g0219851 | 44.118 | 68 | 34 | 1 | 52 | 115 | 424 | 491 | 2.09e-11 | 59.3 |
| Msa0409490 | MtrunA17_Chr8g0344071 | 41.270 | 63 | 37 | 0 | 53 | 115 | 690 | 752 | 6.28e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 17 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATGTTTGTTGTATTT+TGG | 0.154976 | 3_2:-50093444 | Msa0409490:CDS |
| GATTCAACTTCATAATCTTT+TGG | 0.267002 | 3_2:+50093414 | None:intergenic |
| ATGCATGATTTAAGATAAAA+AGG | 0.281885 | 3_2:+50093460 | None:intergenic |
| GTATCCTCACTTAGAATTGA+TGG | 0.358881 | 3_2:-50093273 | Msa0409490:CDS |
| CGAGCTGATTCATCGAAGTT+TGG | 0.362846 | 3_2:-50093301 | Msa0409490:CDS |
| AGATGAAAGGGGAGAAACTT+TGG | 0.405413 | 3_2:-50093349 | Msa0409490:CDS |
| AAGAAGAATTCCCATTTGAC+TGG | 0.450935 | 3_2:-50093520 | Msa0409490:CDS |
| TGATGATGAACTTAGCAAAC+TGG | 0.482104 | 3_2:-50094299 | None:intergenic |
| AGGATTTGTGAAAGATGAAA+GGG | 0.497298 | 3_2:-50093361 | Msa0409490:CDS |
| AAGGATTTGTGAAAGATGAA+AGG | 0.537339 | 3_2:-50093362 | Msa0409490:CDS |
| CAACGAGATCGATTCGACAA+TGG | 0.573215 | 3_2:-50093392 | Msa0409490:CDS |
| TCTATACTGTTTAGTCCTCA+CGG | 0.582237 | 3_2:-50094271 | Msa0409490:CDS |
| AGAAGAATTCCCATTTGACT+GGG | 0.585440 | 3_2:-50093519 | Msa0409490:CDS |
| ATTCGACAATGGATAGCTGA+AGG | 0.603201 | 3_2:-50093381 | Msa0409490:CDS |
| ACTTTGGAACAAGTTGCAGA+AGG | 0.612209 | 3_2:-50093333 | Msa0409490:CDS |
| TTATCCATCAATTCTAAGTG+AGG | 0.617291 | 3_2:+50093269 | None:intergenic |
| GGATTTGTGAAAGATGAAAG+GGG | 0.653358 | 3_2:-50093360 | Msa0409490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACACATTTATTTTTTATTA+AGG | + | chr3_2:50093718-50093737 | None:intergenic | 10.0% |
| !!! | AACACATTTATTTTTTATTA+AGG | + | chr3_2:50093718-50093737 | None:intergenic | 10.0% |
| !!! | TGTCTTTTATATTGATAATT+TGG | - | chr3_2:50093584-50093603 | Msa0409490:intron | 15.0% |
| !!! | TGTCTTTTATATTGATAATT+TGG | - | chr3_2:50093584-50093603 | Msa0409490:intron | 15.0% |
| !! | ATACAATTCAATATAAGGAT+TGG | + | chr3_2:50093550-50093569 | None:intergenic | 20.0% |
| !! | CGATTATACAATTCAATATA+AGG | + | chr3_2:50093555-50093574 | None:intergenic | 20.0% |
| !!! | ACTCAATTTTCTTGAATAAA+AGG | + | chr3_2:50093771-50093790 | None:intergenic | 20.0% |
| !! | TACAAATTACAATCATTCAA+AGG | + | chr3_2:50093829-50093848 | None:intergenic | 20.0% |
| !!! | TTTGGTTGTTATTTATACAA+CGG | - | chr3_2:50093930-50093949 | Msa0409490:intron | 20.0% |
| !!! | ATGCATGATTTAAGATAAAA+AGG | + | chr3_2:50094106-50094125 | None:intergenic | 20.0% |
| !! | ATACAATTCAATATAAGGAT+TGG | + | chr3_2:50093550-50093569 | None:intergenic | 20.0% |
| !! | CGATTATACAATTCAATATA+AGG | + | chr3_2:50093555-50093574 | None:intergenic | 20.0% |
| !!! | ACTCAATTTTCTTGAATAAA+AGG | + | chr3_2:50093771-50093790 | None:intergenic | 20.0% |
| !! | TACAAATTACAATCATTCAA+AGG | + | chr3_2:50093829-50093848 | None:intergenic | 20.0% |
| !!! | TTTGGTTGTTATTTATACAA+CGG | - | chr3_2:50093930-50093949 | Msa0409490:intron | 20.0% |
| !!! | ATGCATGATTTAAGATAAAA+AGG | + | chr3_2:50094106-50094125 | None:intergenic | 20.0% |
| !!! | TTTACACATCACTAGTTTTA+TGG | - | chr3_2:50093492-50093511 | Msa0409490:intron | 25.0% |
| !! | CATGTAAATGCATTTTTACA+TGG | + | chr3_2:50093989-50094008 | None:intergenic | 25.0% |
| ! | CATGTAAAAATGCATTTACA+TGG | - | chr3_2:50093987-50094006 | Msa0409490:intron | 25.0% |
| !! | GATTCAACTTCATAATCTTT+TGG | + | chr3_2:50094152-50094171 | None:intergenic | 25.0% |
| !!! | TTTACACATCACTAGTTTTA+TGG | - | chr3_2:50093492-50093511 | Msa0409490:intron | 25.0% |
| !! | CATGTAAATGCATTTTTACA+TGG | + | chr3_2:50093989-50094008 | None:intergenic | 25.0% |
| ! | CATGTAAAAATGCATTTACA+TGG | - | chr3_2:50093987-50094006 | Msa0409490:intron | 25.0% |
| !! | GATTCAACTTCATAATCTTT+TGG | + | chr3_2:50094152-50094171 | None:intergenic | 25.0% |
| ! | TACATTGCTTCTTTCTTTTC+AGG | - | chr3_2:50093674-50093693 | Msa0409490:intron | 30.0% |
| TTAAGGAAATGTTCCAAAAC+AGG | + | chr3_2:50093701-50093720 | None:intergenic | 30.0% | |
| CTTGAATAAAAGGACAAAGT+AGG | + | chr3_2:50093761-50093780 | None:intergenic | 30.0% | |
| ! | TTCTTCTACTTCTGTAGTTT+TGG | - | chr3_2:50093912-50093931 | Msa0409490:intron | 30.0% |
| ! | TTTTCTTATCCCAGTCAAAT+GGG | + | chr3_2:50094056-50094075 | None:intergenic | 30.0% |
| ! | ACTGGGATAAGAAAAGTTTT+AGG | - | chr3_2:50094061-50094080 | Msa0409490:intron | 30.0% |
| GATAAAAAGGCAAATCATTG+TGG | + | chr3_2:50094093-50094112 | None:intergenic | 30.0% | |
| !!! | CATGCATGTTTGTTGTATTT+TGG | - | chr3_2:50094119-50094138 | Msa0409490:intron | 30.0% |
| AAGGATTTGTGAAAGATGAA+AGG | - | chr3_2:50094201-50094220 | Msa0409490:intron | 30.0% | |
| AGGATTTGTGAAAGATGAAA+GGG | - | chr3_2:50094202-50094221 | Msa0409490:intron | 30.0% | |
| TTATCCATCAATTCTAAGTG+AGG | + | chr3_2:50094297-50094316 | None:intergenic | 30.0% | |
| ! | TACATTGCTTCTTTCTTTTC+AGG | - | chr3_2:50093674-50093693 | Msa0409490:intron | 30.0% |
| TTAAGGAAATGTTCCAAAAC+AGG | + | chr3_2:50093701-50093720 | None:intergenic | 30.0% | |
| CTTGAATAAAAGGACAAAGT+AGG | + | chr3_2:50093761-50093780 | None:intergenic | 30.0% | |
| ! | TTCTTCTACTTCTGTAGTTT+TGG | - | chr3_2:50093912-50093931 | Msa0409490:intron | 30.0% |
| ! | TTTTCTTATCCCAGTCAAAT+GGG | + | chr3_2:50094056-50094075 | None:intergenic | 30.0% |
| ! | ACTGGGATAAGAAAAGTTTT+AGG | - | chr3_2:50094061-50094080 | Msa0409490:intron | 30.0% |
| GATAAAAAGGCAAATCATTG+TGG | + | chr3_2:50094093-50094112 | None:intergenic | 30.0% | |
| !!! | CATGCATGTTTGTTGTATTT+TGG | - | chr3_2:50094119-50094138 | Msa0409490:intron | 30.0% |
| AAGGATTTGTGAAAGATGAA+AGG | - | chr3_2:50094201-50094220 | Msa0409490:intron | 30.0% | |
| AGGATTTGTGAAAGATGAAA+GGG | - | chr3_2:50094202-50094221 | Msa0409490:intron | 30.0% | |
| TTATCCATCAATTCTAAGTG+AGG | + | chr3_2:50094297-50094316 | None:intergenic | 30.0% | |
| TCTATACTGTTTAGTCCTCA+CGG | - | chr3_2:50093292-50093311 | Msa0409490:CDS | 35.0% | |
| !!! | ACATCACTAGTTTTATGGCA+AGG | - | chr3_2:50093497-50093516 | Msa0409490:intron | 35.0% |
| GAGATTCACATTTCTTCAAG+TGG | - | chr3_2:50093640-50093659 | Msa0409490:intron | 35.0% | |
| !!! | TTTCTTTTCAGGTCCTGTTT+TGG | - | chr3_2:50093685-50093704 | Msa0409490:intron | 35.0% |
| TATATTACGAGAGCTTTGCT+TGG | - | chr3_2:50093861-50093880 | Msa0409490:intron | 35.0% | |
| AAGAAGAATTCCCATTTGAC+TGG | - | chr3_2:50094043-50094062 | Msa0409490:intron | 35.0% | |
| AGAAGAATTCCCATTTGACT+GGG | - | chr3_2:50094044-50094063 | Msa0409490:intron | 35.0% | |
| ! | CTTTTCTTATCCCAGTCAAA+TGG | + | chr3_2:50094057-50094076 | None:intergenic | 35.0% |
| GGATTTGTGAAAGATGAAAG+GGG | - | chr3_2:50094203-50094222 | Msa0409490:intron | 35.0% | |
| GTATCCTCACTTAGAATTGA+TGG | - | chr3_2:50094290-50094309 | Msa0409490:CDS | 35.0% | |
| TCTATACTGTTTAGTCCTCA+CGG | - | chr3_2:50093292-50093311 | Msa0409490:CDS | 35.0% | |
| !!! | ACATCACTAGTTTTATGGCA+AGG | - | chr3_2:50093497-50093516 | Msa0409490:intron | 35.0% |
| GAGATTCACATTTCTTCAAG+TGG | - | chr3_2:50093640-50093659 | Msa0409490:intron | 35.0% | |
| !!! | TTTCTTTTCAGGTCCTGTTT+TGG | - | chr3_2:50093685-50093704 | Msa0409490:intron | 35.0% |
| TATATTACGAGAGCTTTGCT+TGG | - | chr3_2:50093861-50093880 | Msa0409490:intron | 35.0% | |
| AAGAAGAATTCCCATTTGAC+TGG | - | chr3_2:50094043-50094062 | Msa0409490:intron | 35.0% | |
| AGAAGAATTCCCATTTGACT+GGG | - | chr3_2:50094044-50094063 | Msa0409490:intron | 35.0% | |
| ! | CTTTTCTTATCCCAGTCAAA+TGG | + | chr3_2:50094057-50094076 | None:intergenic | 35.0% |
| GGATTTGTGAAAGATGAAAG+GGG | - | chr3_2:50094203-50094222 | Msa0409490:intron | 35.0% | |
| GTATCCTCACTTAGAATTGA+TGG | - | chr3_2:50094290-50094309 | Msa0409490:CDS | 35.0% | |
| !! | CAAGGTTCTAAACCCTCTAA+GGG | - | chr3_2:50093515-50093534 | Msa0409490:CDS | 40.0% |
| TGGAAAAACTAGCCCTTAGA+GGG | + | chr3_2:50093530-50093549 | None:intergenic | 40.0% | |
| TTGGAAAAACTAGCCCTTAG+AGG | + | chr3_2:50093531-50093550 | None:intergenic | 40.0% | |
| GATAATTTGGTCTGAACTGC+AGG | - | chr3_2:50093597-50093616 | Msa0409490:intron | 40.0% | |
| ATTCGACAATGGATAGCTGA+AGG | - | chr3_2:50094182-50094201 | Msa0409490:intron | 40.0% | |
| AGATGAAAGGGGAGAAACTT+TGG | - | chr3_2:50094214-50094233 | Msa0409490:intron | 40.0% | |
| !! | ACTTTGGAACAAGTTGCAGA+AGG | - | chr3_2:50094230-50094249 | Msa0409490:intron | 40.0% |
| !! | CAAGGTTCTAAACCCTCTAA+GGG | - | chr3_2:50093515-50093534 | Msa0409490:CDS | 40.0% |
| TGGAAAAACTAGCCCTTAGA+GGG | + | chr3_2:50093530-50093549 | None:intergenic | 40.0% | |
| TTGGAAAAACTAGCCCTTAG+AGG | + | chr3_2:50093531-50093550 | None:intergenic | 40.0% | |
| GATAATTTGGTCTGAACTGC+AGG | - | chr3_2:50093597-50093616 | Msa0409490:intron | 40.0% | |
| ATTCGACAATGGATAGCTGA+AGG | - | chr3_2:50094182-50094201 | Msa0409490:intron | 40.0% | |
| AGATGAAAGGGGAGAAACTT+TGG | - | chr3_2:50094214-50094233 | Msa0409490:intron | 40.0% | |
| !! | ACTTTGGAACAAGTTGCAGA+AGG | - | chr3_2:50094230-50094249 | Msa0409490:intron | 40.0% |
| TCCTCACGGCTTGTCAAAAA+AGG | - | chr3_2:50093306-50093325 | Msa0409490:CDS | 45.0% | |
| !!! | ACCTTTTTTGACAAGCCGTG+AGG | + | chr3_2:50093310-50093329 | None:intergenic | 45.0% |
| !! | GCAAGGTTCTAAACCCTCTA+AGG | - | chr3_2:50093514-50093533 | Msa0409490:CDS | 45.0% |
| !! | CAACGAGATCGATTCGACAA+TGG | - | chr3_2:50094171-50094190 | Msa0409490:intron | 45.0% |
| ! | CGAGCTGATTCATCGAAGTT+TGG | - | chr3_2:50094262-50094281 | Msa0409490:CDS | 45.0% |
| TCCTCACGGCTTGTCAAAAA+AGG | - | chr3_2:50093306-50093325 | Msa0409490:CDS | 45.0% | |
| !!! | ACCTTTTTTGACAAGCCGTG+AGG | + | chr3_2:50093310-50093329 | None:intergenic | 45.0% |
| !! | GCAAGGTTCTAAACCCTCTA+AGG | - | chr3_2:50093514-50093533 | Msa0409490:CDS | 45.0% |
| !! | CAACGAGATCGATTCGACAA+TGG | - | chr3_2:50094171-50094190 | Msa0409490:intron | 45.0% |
| ! | CGAGCTGATTCATCGAAGTT+TGG | - | chr3_2:50094262-50094281 | Msa0409490:CDS | 45.0% |
| TTGGTCTGAACTGCAGGTGA+TGG | - | chr3_2:50093603-50093622 | Msa0409490:intron | 50.0% | |
| ! | CTGCAGGTGATGGTCATCAA+TGG | - | chr3_2:50093613-50093632 | Msa0409490:intron | 50.0% |
| AGAGCTTTGCTTGGAGAGAG+AGG | - | chr3_2:50093870-50093889 | Msa0409490:intron | 50.0% | |
| TTGGTCTGAACTGCAGGTGA+TGG | - | chr3_2:50093603-50093622 | Msa0409490:intron | 50.0% | |
| ! | CTGCAGGTGATGGTCATCAA+TGG | - | chr3_2:50093613-50093632 | Msa0409490:intron | 50.0% |
| AGAGCTTTGCTTGGAGAGAG+AGG | - | chr3_2:50093870-50093889 | Msa0409490:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 50093269 | 50094316 | 50093269 | ID=Msa0409490;Name=Msa0409490 |
| chr3_2 | mRNA | 50093269 | 50094316 | 50093269 | ID=Msa0409490-mRNA-1;Parent=Msa0409490;Name=Msa0409490-mRNA-1;_AED=0.44;_eAED=0.51;_QI=0|0|0|1|0|0|3|0|115 |
| chr3_2 | exon | 50094258 | 50094316 | 50094258 | ID=Msa0409490-mRNA-1:exon:9950;Parent=Msa0409490-mRNA-1 |
| chr3_2 | exon | 50093510 | 50093564 | 50093510 | ID=Msa0409490-mRNA-1:exon:9949;Parent=Msa0409490-mRNA-1 |
| chr3_2 | exon | 50093269 | 50093502 | 50093269 | ID=Msa0409490-mRNA-1:exon:9948;Parent=Msa0409490-mRNA-1 |
| chr3_2 | CDS | 50094258 | 50094316 | 50094258 | ID=Msa0409490-mRNA-1:cds;Parent=Msa0409490-mRNA-1 |
| chr3_2 | CDS | 50093510 | 50093564 | 50093510 | ID=Msa0409490-mRNA-1:cds;Parent=Msa0409490-mRNA-1 |
| chr3_2 | CDS | 50093269 | 50093502 | 50093269 | ID=Msa0409490-mRNA-1:cds;Parent=Msa0409490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
