AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170990 MtrunA17_Chr1g0188881 88.591 447 25 4 378 798 7 453 0.0 790
Msa0170990 MtrunA17_Chr1g0188881 65.053 475 64 6 4 377 10 483 0.0 576
Msa0170990 MtrunA17_Chr1g0188871 75.424 472 21 4 1 377 1 472 0.0 685
Msa0170990 MtrunA17_Chr1g0188871 77.098 441 71 6 383 798 6 441 0.0 668
Msa0170990 MtrunA17_Chr7g0267471 45.855 386 183 4 421 795 54 424 1.85e-98 314
Msa0170990 MtrunA17_Chr7g0267471 40.415 386 157 7 41 354 51 435 2.94e-69 236
Msa0170990 MtrunA17_Chr2g0321971 43.411 387 196 7 423 798 51 425 5.55e-96 306
Msa0170990 MtrunA17_Chr2g0321971 35.958 381 170 5 41 347 46 426 3.24e-66 227
Msa0170990 MtrunA17_Chr4g0025591 42.377 387 189 4 423 793 55 423 4.49e-95 305
Msa0170990 MtrunA17_Chr4g0025591 37.875 367 148 6 46 339 55 414 3.14e-67 230
Msa0170990 MtrunA17_Chr2g0321961 38.961 385 211 6 420 793 48 419 3.59e-75 251
Msa0170990 MtrunA17_Chr2g0321961 32.620 374 179 6 41 341 46 419 3.89e-45 168
Msa0170990 MtrunA17_Chr1g0212201 37.673 361 193 5 423 754 55 412 8.40e-75 253
Msa0170990 MtrunA17_Chr1g0212201 35.928 334 150 6 27 296 18 351 1.69e-59 211
Msa0170990 MtrunA17_Chr1g0212251 40.000 330 176 6 423 734 51 376 4.87e-72 245
Msa0170990 MtrunA17_Chr1g0212251 37.748 302 141 5 41 296 46 346 1.77e-58 208
Msa0170990 MtrunA17_Chr7g0259731 36.061 391 213 9 423 795 70 441 7.16e-69 234
Msa0170990 MtrunA17_Chr7g0259731 31.367 373 180 8 46 343 70 441 7.73e-44 164
Msa0170990 MtrunA17_Chr4g0054741 33.708 445 225 8 420 794 60 504 9.19e-67 231
Msa0170990 MtrunA17_Chr4g0054741 34.513 339 174 4 4 296 23 359 1.63e-49 183
Msa0170990 MtrunA17_Chr1g0212291 39.157 332 181 4 421 734 50 378 1.76e-64 224
Msa0170990 MtrunA17_Chr1g0212291 34.604 341 172 5 41 335 47 382 1.94e-49 182
Msa0170990 MtrunA17_Chr8g0390931 36.137 321 190 7 421 729 71 388 5.06e-53 193
Msa0170990 MtrunA17_Chr8g0390931 31.229 301 163 5 44 302 71 369 1.64e-37 148
Msa0170990 MtrunA17_Chr6g0484691 31.759 381 218 10 390 730 48 426 5.74e-51 188
Msa0170990 MtrunA17_Chr6g0484691 27.221 349 182 8 21 302 63 406 1.19e-32 134
Msa0170990 MtrunA17_Chr1g0210101 31.657 338 209 6 421 740 125 458 2.20e-48 181
Msa0170990 MtrunA17_Chr1g0210101 27.974 311 169 5 44 302 125 432 1.74e-30 127
Msa0170990 MtrunA17_Chr8g0390921 30.986 355 204 9 419 735 56 407 1.27e-45 172
Msa0170990 MtrunA17_Chr8g0390921 25.490 408 223 9 34 372 47 442 1.17e-31 130
Msa0170990 MtrunA17_Chr5g0400471 33.333 312 166 5 465 734 3 314 4.26e-44 166
Msa0170990 MtrunA17_Chr5g0400471 30.142 282 124 5 88 296 3 284 4.39e-27 115
Msa0170990 MtrunA17_Chr8g0390901 32.323 297 175 7 463 735 9 303 1.76e-40 155
Msa0170990 MtrunA17_Chr8g0390901 25.895 363 198 9 86 391 9 357 6.16e-25 109
Msa0170990 MtrunA17_Chr4g0054771 29.379 354 180 5 511 794 3 356 9.78e-40 151
Msa0170990 MtrunA17_Chr4g0054771 31.100 209 98 3 134 296 3 211 4.04e-25 108
Msa0170990 MtrunA17_Chr4g0054761 49.451 91 46 0 421 511 61 151 2.98e-12 65.5
Msa0170990 MtrunA17_Chr4g0054761 48.936 94 48 0 41 134 58 151 1.10e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170990 AT4G00910.1 45.887 462 200 9 383 796 9 468 5.79e-132 402
Msa0170990 AT4G00910.1 38.186 474 168 10 5 356 8 478 7.08e-93 300
Msa0170990 AT1G08440.1 43.041 388 190 5 420 791 24 396 4.02e-99 317
Msa0170990 AT1G08440.1 36.533 375 162 5 41 339 22 396 3.30e-67 231
Msa0170990 AT2G27240.2 41.388 389 205 5 421 797 25 402 6.08e-97 310
Msa0170990 AT2G27240.2 34.908 381 172 5 41 345 22 402 4.11e-66 228
Msa0170990 AT1G08430.1 41.310 397 199 6 420 797 24 405 1.15e-93 302
Msa0170990 AT1G08430.1 35.079 382 169 6 43 345 24 405 3.48e-63 220
Msa0170990 AT2G27240.1 38.795 415 205 5 421 797 25 428 2.90e-93 301
Msa0170990 AT2G27240.1 32.678 407 172 5 41 345 22 428 5.18e-62 218
Msa0170990 AT3G11680.1 44.246 391 190 5 421 798 48 423 2.44e-91 296
Msa0170990 AT3G11680.1 35.337 416 182 7 18 346 8 423 1.81e-57 204
Msa0170990 AT3G11680.2 44.703 387 186 5 421 794 50 421 2.58e-91 296
Msa0170990 AT3G11680.2 35.337 416 182 7 18 346 10 425 1.77e-57 204
Msa0170990 AT4G17970.1 37.572 346 198 4 420 747 50 395 7.30e-74 251
Msa0170990 AT4G17970.1 34.564 298 152 3 41 295 48 345 1.65e-54 198
Msa0170990 AT5G46600.1 35.233 386 210 6 381 734 8 385 5.48e-71 243
Msa0170990 AT5G46600.1 34.868 304 149 4 41 295 51 354 2.21e-55 200
Msa0170990 AT5G46610.1 37.048 332 194 3 418 734 50 381 6.64e-68 234
Msa0170990 AT5G46610.1 34.437 302 152 3 41 296 50 351 1.59e-51 189
Msa0170990 AT5G46610.2 33.434 332 182 4 418 734 50 357 2.87e-55 199
Msa0170990 AT5G46610.2 30.132 302 141 4 41 296 50 327 4.09e-39 152
Msa0170990 AT3G18440.1 33.699 365 201 10 409 735 65 426 9.44e-53 194
Msa0170990 AT3G18440.1 30.086 349 171 10 23 302 55 399 1.43e-35 143
Msa0170990 AT1G18420.1 31.980 394 217 11 401 750 58 444 5.32e-51 188
Msa0170990 AT1G18420.1 28.613 346 185 6 46 338 97 433 1.68e-35 143
Msa0170990 AT1G18420.2 32.578 353 208 8 423 750 14 361 7.15e-51 186
Msa0170990 AT1G18420.2 28.613 346 185 6 46 338 14 350 4.71e-36 143
Msa0170990 AT2G17470.1 33.728 338 199 8 421 736 43 377 1.18e-48 181
Msa0170990 AT2G17470.1 29.487 312 164 8 44 302 43 351 3.27e-30 126
Msa0170990 AT2G17470.2 33.728 338 199 8 421 736 65 399 1.52e-48 181
Msa0170990 AT2G17470.2 29.487 312 164 8 44 302 65 373 2.85e-30 127
Msa0170990 AT1G68600.1 34.405 311 182 7 423 714 62 369 3.80e-48 179
Msa0170990 AT1G68600.1 29.268 328 176 8 46 320 62 386 2.57e-29 124
Msa0170990 AT1G25480.1 33.929 336 197 8 423 736 73 405 2.38e-47 177
Msa0170990 AT1G25480.1 29.032 310 164 8 46 302 73 379 1.48e-26 115
Msa0170990 AT5G46610.3 31.138 334 168 4 416 734 48 334 1.37e-45 171
Msa0170990 AT5G46610.3 28.947 304 123 4 39 296 48 304 3.90e-33 134

Find 141 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATCAAAACGAGCCTTTA+TGG 0.138720 1_4:-55489013 None:intergenic
TCTTGCATTGATGCTCTTAT+TGG 0.158685 1_4:+55483221 Msa0170990:CDS
ACTTGAATTAATTCTATTAT+TGG 0.173844 1_4:-55483662 None:intergenic
AGAATTTCCACTATTATAAT+TGG 0.174482 1_4:+55482494 Msa0170990:CDS
ACTTGAATTAATTCCATTAT+TGG 0.189011 1_4:-55490239 None:intergenic
TTCAGCTTGGTTTCAATATC+TGG 0.213828 1_4:+55489060 Msa0170990:CDS
AGGATTTCTACTATTATAAT+TGG 0.227233 1_4:+55489120 Msa0170990:CDS
GAGCAGGACTCCAACAATTA+TGG 0.249770 1_4:-55488819 None:intergenic
GGCAAGTTTGTCGAGGTTTC+CGG 0.250712 1_4:-55489217 None:intergenic
TGGAAGCAATATCTTAAAAT+TGG 0.274268 1_4:+55483176 Msa0170990:intron
CGACAAACTTGCCAACTCTT+TGG 0.277455 1_4:+55489227 Msa0170990:CDS
TCCTCATCATTCTGTTGTTC+TGG 0.283572 1_4:-55483836 None:intergenic
TGGAAGCAATACCTTAAAAT+TGG 0.285842 1_4:+55489745 Msa0170990:CDS
GCATGATTATTCGACCTGTT+TGG 0.287777 1_4:+55489166 Msa0170990:CDS
GCACGACTGTTCGCCCTGTT+TGG 0.294097 1_4:+55482540 Msa0170990:CDS
AAGATTTATACCAACTATAA+AGG 0.295645 1_4:+55482373 Msa0170990:CDS
TCCTGTATTGATGCTCTTGT+TGG 0.297080 1_4:+55489790 Msa0170990:CDS
CAATGATTCTTCTGTTGCTT+TGG 0.297791 1_4:-55482963 None:intergenic
CTTCCAACACCATCATATAA+AGG 0.302727 1_4:-55481430 None:intergenic
AATTGATGAATTGTTTGATA+TGG 0.306438 1_4:+55489089 Msa0170990:CDS
CATGATTATTCGACCTGTTT+GGG 0.318706 1_4:+55489167 Msa0170990:CDS
CATTGATACTTCTGTTGCTT+TGG 0.318862 1_4:-55489567 None:intergenic
CTTGAATTAATTCTATTATT+GGG 0.328345 1_4:-55483661 None:intergenic
CACGACTGTTCGCCCTGTTT+GGG 0.329652 1_4:+55482541 Msa0170990:CDS
GTTAGACTCACTTGCTGCTT+GGG 0.330664 1_4:-55482906 None:intergenic
CTTGAATTAATTCCATTATT+GGG 0.330827 1_4:-55490238 None:intergenic
AATTGATGAATTGTTTGATT+TGG 0.335580 1_4:+55482463 Msa0170990:CDS
GTTGTCTGTTGAATGTTGTT+TGG 0.338958 1_4:-55483804 None:intergenic
AGTGAGGCTCCAACAATTAC+AGG 0.347390 1_4:-55481879 None:intergenic
TTCAGTTTGGTTTCAATATC+CGG 0.352067 1_4:+55482434 Msa0170990:CDS
ATTTATCCTCACTTTCAGTT+TGG 0.369853 1_4:+55482421 Msa0170990:CDS
TTCTAGCCTTTGGTGTACAT+TGG 0.372115 1_4:+55481826 Msa0170990:CDS
TCTAGCCTTTGGTGTACATT+GGG 0.373912 1_4:+55481827 Msa0170990:CDS
CTTGCCGGGCTTCTAGCCTT+TGG 0.375772 1_4:+55481816 Msa0170990:CDS
ATATGTGGAACTACCCTTGC+CGG 0.376919 1_4:+55481801 Msa0170990:CDS
CTCGCCGGATTTCTAGCCTT+TGG 0.380399 1_4:+55488755 Msa0170990:CDS
TTGAAACCAAGCTGAAAGTT+AGG 0.380911 1_4:-55489053 None:intergenic
TGTTAGACTCACTTGCTGCT+TGG 0.402132 1_4:-55482907 None:intergenic
TTCTAGCCTTTGGCGTACAT+TGG 0.406843 1_4:+55488765 Msa0170990:CDS
GGAGTCCTGCTCTTTCTACT+AGG 0.409608 1_4:+55488830 Msa0170990:CDS
CAATTCATCAATTCTATAAC+CGG 0.413490 1_4:-55482453 None:intergenic
AGTTCTAGACCAGCCCAAAC+AGG 0.414800 1_4:-55482554 None:intergenic
AGCAGGACTCCAACAATTAT+GGG 0.421556 1_4:-55488818 None:intergenic
CAAAACGAGCCTTTATGGTT+GGG 0.430411 1_4:-55489008 None:intergenic
TACTTGAATCCTTTGTATGA+TGG 0.432772 1_4:+55488100 Msa0170990:CDS
ACTGTTCGCCCTGTTTGGGC+TGG 0.434664 1_4:+55482545 Msa0170990:CDS
TGAAGTTCCAATTATAATAG+TGG 0.434981 1_4:-55482501 None:intergenic
AAGATTCATCCCAACCATAA+AGG 0.436098 1_4:+55488999 Msa0170990:CDS
GAACTAACCTTCCAAAGAGT+TGG 0.438285 1_4:-55489238 None:intergenic
CAAAGCAACAGAAGAATCAT+TGG 0.439510 1_4:+55482964 Msa0170990:CDS
TTCAGGCTAATTTAGCAAGA+TGG 0.439855 1_4:+55489686 Msa0170990:intron
TTTCACAAATTTGCACAACT+TGG 0.440882 1_4:-55481308 None:intergenic
TCTAGCCTTTGGCGTACATT+GGG 0.446032 1_4:+55488766 Msa0170990:CDS
TACTTGAAACCTTTATATGA+TGG 0.450489 1_4:+55481421 Msa0170990:CDS
CAATTGGAACCCATAATTGT+TGG 0.452675 1_4:+55488809 Msa0170990:CDS
TCAAAACGAGCCTTTATAGT+TGG 0.456472 1_4:-55482383 None:intergenic
TCAGGCTAATTTAGCAAGAT+GGG 0.465820 1_4:+55489687 Msa0170990:intron
GAGTGGTAAAAGTAGTAGAA+TGG 0.468644 1_4:+55487885 Msa0170990:CDS
GAAATTCCAGCTCTCTTCCA+TGG 0.473583 1_4:-55481250 None:intergenic
CAATGGGAACCTGTAATTGT+TGG 0.475128 1_4:+55481870 Msa0170990:CDS
TGACTAATGAAAAGGTAGAA+TGG 0.476764 1_4:+55481206 Msa0170990:CDS
TCAAAACGAGCCTTTATGGT+TGG 0.485348 1_4:-55489009 None:intergenic
CATTGGGTTGCTAGTAAAGC+AGG 0.488274 1_4:+55481843 Msa0170990:CDS
ATTAAAGATGACTAATGAAA+AGG 0.488687 1_4:+55481198 None:intergenic
AGTTCTAGACCAGCCCAAAC+AGG 0.489088 1_4:-55489180 None:intergenic
TCTTAAGACACTTGCAGAGT+TGG 0.491371 1_4:-55490048 None:intergenic
TACGCCAAAGGCTAGAAATC+CGG 0.496244 1_4:-55488759 None:intergenic
AGTAGTAGAATGGAGTATCA+AGG 0.500383 1_4:+55487895 Msa0170990:CDS
CATTGGGTTGCTAGTAAAGC+AGG 0.502492 1_4:+55488782 Msa0170990:CDS
TCCATGGACCATCTTCTACC+TGG 0.506733 1_4:-55481234 None:intergenic
AAAAGTAGGAATAGCACTTA+CGG 0.507573 1_4:+55481381 Msa0170990:intron
CAAAGCAACAGAAGTATCAA+TGG 0.508008 1_4:+55489568 Msa0170990:CDS
AATCTTCTTGATTTCATCTG+AGG 0.508625 1_4:-55489997 None:intergenic
CTAGTAAAGCAGGAGATCAA+TGG 0.509667 1_4:+55481853 Msa0170990:CDS
TCCAACAAGAGCATCAATAC+AGG 0.510116 1_4:-55489791 None:intergenic
CTGGAATTTCTTGCGGCATG+TGG 0.511954 1_4:+55481263 Msa0170990:CDS
ATTATTCGACCTGTTTGGGC+TGG 0.512091 1_4:+55489171 Msa0170990:CDS
AAAAGTATAAATAGAATATG+TGG 0.516571 1_4:+55488725 Msa0170990:CDS
AAAGGTAGGAATAGCACTTA+CGG 0.517885 1_4:+55488060 Msa0170990:intron
TAGTAAAGCAGGAGATCAAT+GGG 0.520063 1_4:+55481854 Msa0170990:CDS
AAACTTGCCAACTCTTTGGA+AGG 0.525053 1_4:+55489231 Msa0170990:CDS
AATCCTTTGTATGATGGAGT+TGG 0.525534 1_4:+55488106 Msa0170990:CDS
AAATTGAAGCGACCGTGGGC+AGG 0.526155 1_4:-55489712 None:intergenic
GATGGTCCATGGAAGAGAGC+TGG 0.527590 1_4:+55481244 Msa0170990:CDS
AAAAGTGTAAACAGAATATG+TGG 0.528989 1_4:+55481786 Msa0170990:CDS
TAGTAAAGCAGGAAAGCAAT+TGG 0.530375 1_4:+55488793 Msa0170990:CDS
GAGCACAACATCAATGAAAG+TGG 0.530404 1_4:+55490022 Msa0170990:CDS
TACACCAAAGGCTAGAAGCC+CGG 0.532274 1_4:-55481820 None:intergenic
AAACCTTTATATGATGGTGT+TGG 0.534000 1_4:+55481427 Msa0170990:CDS
ATTTATCCTAACTTTCAGCT+TGG 0.537358 1_4:+55489047 Msa0170990:CDS
TGGAGAATCCAGGTAGAAGA+TGG 0.550522 1_4:+55481226 Msa0170990:CDS
TGGAGTATCAAGGTAGAAGA+TGG 0.555329 1_4:+55487905 Msa0170990:CDS
TATGTGGAACTACCCTTGCC+GGG 0.557506 1_4:+55481802 Msa0170990:CDS
TGGTATAAATCTTGAAAATG+TGG 0.560638 1_4:-55482363 None:intergenic
TGGAATTTCTTGCGGCATGT+GGG 0.562370 1_4:+55481264 Msa0170990:CDS
AATAATAGAATTAATTCAAG+TGG 0.567797 1_4:+55483664 Msa0170990:CDS
GTAGTCTTTGAGTACACTGC+TGG 0.568453 1_4:+55488163 Msa0170990:CDS
AAAGGCTAGAAGCCCGGCAA+GGG 0.569854 1_4:-55481814 None:intergenic
CTTCCAACTCCATCATACAA+AGG 0.572397 1_4:-55488109 None:intergenic
TCAAGGTAGAAGATGGTCCA+TGG 0.576705 1_4:+55487912 Msa0170990:CDS
TCCAGGTAGAAGATGGTCCA+TGG 0.576984 1_4:+55481233 Msa0170990:CDS
AAAGGTAGAATGGAGAATCC+AGG 0.582137 1_4:+55481216 Msa0170990:CDS
GTTCTAGACCAGCCCAAACA+GGG 0.583021 1_4:-55482553 None:intergenic
GACGAAAATTGAAGCGACCG+TGG 0.583474 1_4:-55489717 None:intergenic
GGAATTAATTCAAGTGGTCA+CGG 0.587654 1_4:+55490247 Msa0170990:CDS
GTAGTCTTTGAGTACACTGC+CGG 0.588668 1_4:+55481484 Msa0170990:CDS
GTTGTCACCTACTTTCATAG+AGG 0.589780 1_4:-55483462 None:intergenic
AATAATGGAATTAATTCAAG+TGG 0.589844 1_4:+55490241 Msa0170990:CDS
AATGCAAAAGAAACATCCCT+TGG 0.591201 1_4:+55490197 Msa0170990:CDS
TACTGAAATTGTAGCTCGTG+TGG 0.591275 1_4:+55483706 Msa0170990:CDS
GCAAGATGGGAGCCTGCCCA+CGG 0.596456 1_4:+55489700 Msa0170990:CDS
TACTGAAACTGTAGCTCGTG+TGG 0.597026 1_4:+55490283 Msa0170990:CDS
AGCAGAACCTCTATGAAAGT+AGG 0.598229 1_4:+55483455 Msa0170990:CDS
CAAAGGCTAGAAGCCCGGCA+AGG 0.602133 1_4:-55481815 None:intergenic
TTGAAACCAAACTGAAAGTG+AGG 0.606576 1_4:-55482427 None:intergenic
TTGCATAAATTCAGAAAACA+AGG 0.607863 1_4:+55483244 Msa0170990:CDS
CAACTTGAAATAAAGACCTA+CGG 0.608743 1_4:-55487972 None:intergenic
AAGAGAGCTGGAATTTCTTG+CGG 0.610493 1_4:+55481256 Msa0170990:CDS
TTATACCTAGTAGAAAGAGC+AGG 0.611127 1_4:-55488835 None:intergenic
AAAGGCTAGAAATCCGGCGA+GGG 0.612317 1_4:-55488753 None:intergenic
ATATGTGGAACTACCCTCGC+CGG 0.614535 1_4:+55488740 Msa0170990:CDS
AAGAGTTGGCAAGTTTGTCG+AGG 0.616195 1_4:-55489224 None:intergenic
TGTTTGATATGGCACGACAA+AGG 0.616649 1_4:+55489100 Msa0170990:CDS
ATGTATAAATTCAGAAAACA+AGG 0.617477 1_4:+55489813 Msa0170990:CDS
AGCACAACATCAATGAAAGT+GGG 0.618681 1_4:+55490023 Msa0170990:CDS
ACGAAAATTGAAGCGACCGT+GGG 0.621590 1_4:-55489716 None:intergenic
TGAAGCTCAATCAGCAAGTG+CGG 0.622011 1_4:+55489502 Msa0170990:CDS
AGCATGTGTGCATTTACCGT+AGG 0.626002 1_4:+55487956 Msa0170990:CDS
AATCTTCATGATGTCATCTG+AGG 0.633279 1_4:-55483429 None:intergenic
GGAAGCACATCTACGCATTG+TGG 0.638545 1_4:-55489770 None:intergenic
GTACTCAAAGACTACTACCA+CGG 0.644472 1_4:-55488155 None:intergenic
GTACTCAAAGACTACAATCA+CGG 0.651714 1_4:-55481476 None:intergenic
AGCAACCCAATGTACACCAA+AGG 0.653502 1_4:-55481832 None:intergenic
AGCAACCCAATGTACGCCAA+AGG 0.653502 1_4:-55488771 None:intergenic
GTGTTGGAAGAAATGCTATG+TGG 0.665026 1_4:+55481443 Msa0170990:CDS
TGTTGGAAGAAATGCTATGT+GGG 0.671135 1_4:+55481444 Msa0170990:CDS
GAGTTGGAAGAAATGCTATG+TGG 0.671160 1_4:+55488122 Msa0170990:CDS
AGTTGGAAGAAATGCTATGT+GGG 0.673533 1_4:+55488123 Msa0170990:CDS
ACCAGAACAACAGAATGATG+AGG 0.679230 1_4:+55483835 Msa0170990:CDS
CAAAGGCTAGAAATCCGGCG+AGG 0.687693 1_4:-55488754 None:intergenic
TATGTGGGCAGTCATGACCG+TGG 0.821986 1_4:+55488138 Msa0170990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAATTAATTAATTA+AGG - chr1_4:55483285-55483304 None:intergenic 0.0%
!!! AAATATTTGATTAGTTTTTA+GGG - chr1_4:55482763-55482782 None:intergenic 10.0%
!! ATAAATATTAATGTAATATG+AGG + chr1_4:55484135-55484154 Msa0170990:intron 10.0%
!! TAAAAAAAACTTAAAAACTA+AGG + chr1_4:55484396-55484415 Msa0170990:intron 10.0%
!! AAAAAAAACTTAAAAACTAA+GGG + chr1_4:55484397-55484416 Msa0170990:intron 10.0%
!! AATAAACAATAATATATTGA+TGG + chr1_4:55484763-55484782 Msa0170990:intron 10.0%
!! TTATGTTTACATATTAAAAA+GGG + chr1_4:55485787-55485806 Msa0170990:intron 10.0%
!! AGTAAATAAAATTACAATTT+AGG + chr1_4:55486118-55486137 Msa0170990:intron 10.0%
!! GTAAATAAAATTACAATTTA+GGG + chr1_4:55486119-55486138 Msa0170990:intron 10.0%
!!! AACTTTTTATAATATCTTAA+AGG - chr1_4:55486381-55486400 None:intergenic 10.0%
!! ATTAATTAACAACTAAAATT+AGG - chr1_4:55488283-55488302 None:intergenic 10.0%
!!! ACATTATTTATTTTTATAGA+AGG + chr1_4:55489413-55489432 Msa0170990:intron 10.0%
!!! TAACGACTAAATTTTTTTAA+GGG - chr1_4:55481616-55481635 None:intergenic 15.0%
!!! CAAATATTTGATTAGTTTTT+AGG - chr1_4:55482764-55482783 None:intergenic 15.0%
!! CCGATTATAAATTAATTTAA+GGG - chr1_4:55483027-55483046 None:intergenic 15.0%
!! CCCTTAAATTAATTTATAAT+CGG + chr1_4:55483024-55483043 Msa0170990:intron 15.0%
!! TCCGATTATAAATTAATTTA+AGG - chr1_4:55483028-55483047 None:intergenic 15.0%
!! TAGTCATGTTATATAAATTA+GGG - chr1_4:55483079-55483098 None:intergenic 15.0%
!! TTAGTCATGTTATATAAATT+AGG - chr1_4:55483080-55483099 None:intergenic 15.0%
!!! ATTAATATTTTGTTGATTTC+AGG + chr1_4:55483100-55483119 Msa0170990:intron 15.0%
!!! AAGTCATTACTATTATTTTT+TGG + chr1_4:55483310-55483329 Msa0170990:intron 15.0%
!! CTTGAATTAATTCTATTATT+GGG - chr1_4:55483664-55483683 None:intergenic 15.0%
!! ACTTGAATTAATTCTATTAT+TGG - chr1_4:55483665-55483684 None:intergenic 15.0%
!! AATAATAGAATTAATTCAAG+TGG + chr1_4:55483664-55483683 Msa0170990:CDS 15.0%
!! ATATATACAAGAAGAAAAAA+TGG + chr1_4:55483985-55484004 Msa0170990:intron 15.0%
!! AATGCAAAATTAATGATATT+TGG - chr1_4:55484065-55484084 None:intergenic 15.0%
!!! TCAACATAATTGTATTTTAT+TGG - chr1_4:55485259-55485278 None:intergenic 15.0%
!!! TTATATTTATGCTCTAAATT+CGG + chr1_4:55485281-55485300 Msa0170990:intron 15.0%
!! GTTATGTTTACATATTAAAA+AGG + chr1_4:55485786-55485805 Msa0170990:intron 15.0%
!! GATTAAACAAAATTGAAATT+AGG - chr1_4:55486326-55486345 None:intergenic 15.0%
!! ACAATGACATTAAATTATTA+TGG + chr1_4:55486450-55486469 Msa0170990:intron 15.0%
!!! GCTATTTCATTTTTTTTTTT+AGG + chr1_4:55486635-55486654 Msa0170990:intron 15.0%
!!! TTGCTATATTTTTTTTAACT+TGG - chr1_4:55486850-55486869 None:intergenic 15.0%
!! TGATTACATTAATATTAACT+AGG - chr1_4:55487508-55487527 None:intergenic 15.0%
!! TCTATTTATATAGAAAGAAT+GGG - chr1_4:55487766-55487785 None:intergenic 15.0%
!! TTCTATTTATATAGAAAGAA+TGG - chr1_4:55487767-55487786 None:intergenic 15.0%
!! TAGAATAATGAAATTATAGA+CGG - chr1_4:55488215-55488234 None:intergenic 15.0%
!!! TTAATTTAAGGTCAAAATTA+TGG + chr1_4:55488325-55488344 Msa0170990:intron 15.0%
!! TTTATATCAAAAATGTTGTA+TGG - chr1_4:55488458-55488477 None:intergenic 15.0%
!!! AAAAGTATAAATAGAATATG+TGG + chr1_4:55488725-55488744 Msa0170990:CDS 15.0%
!! CATACTAATAATATTATTGT+TGG - chr1_4:55488870-55488889 None:intergenic 15.0%
!! TTTAAAGACTAAGTATATTA+TGG + chr1_4:55489345-55489364 Msa0170990:intron 15.0%
!! TTAAAGACTAAGTATATTAT+GGG + chr1_4:55489346-55489365 Msa0170990:intron 15.0%
!!! AAATATCATTGATTAATTTC+AGG + chr1_4:55489669-55489688 Msa0170990:intron 15.0%
!! AAATAATTAAATGTACCTTA+GGG - chr1_4:55489969-55489988 None:intergenic 15.0%
!! AAAATAATTAAATGTACCTT+AGG - chr1_4:55489970-55489989 None:intergenic 15.0%
!!! AAATTTTTTTAAGGGTGTAA+CGG - chr1_4:55481608-55481627 None:intergenic 20.0%
!!! GTAACGACTAAATTTTTTTA+AGG - chr1_4:55481617-55481636 None:intergenic 20.0%
!!! TATACTATATGTTAATTTGC+AGG + chr1_4:55481750-55481769 Msa0170990:intron 20.0%
!! TCCTATTTATAAGAGAAATT+TGG + chr1_4:55482043-55482062 Msa0170990:intron 20.0%
!! CCTATTTATAAGAGAAATTT+GGG + chr1_4:55482044-55482063 Msa0170990:intron 20.0%
!! GATGTATCAAGTTAAAAATT+TGG + chr1_4:55482079-55482098 Msa0170990:intron 20.0%
!! AAGATTTATACCAACTATAA+AGG + chr1_4:55482373-55482392 Msa0170990:CDS 20.0%
!! AATTGATGAATTGTTTGATT+TGG + chr1_4:55482463-55482482 Msa0170990:CDS 20.0%
!! AGAATTTCCACTATTATAAT+TGG + chr1_4:55482494-55482513 Msa0170990:CDS 20.0%
!!! ATTAGGGTTAAATATGTTTT+TGG - chr1_4:55483063-55483082 None:intergenic 20.0%
!! ATGTGAAAATTATATTGAGA+CGG - chr1_4:55484619-55484638 None:intergenic 20.0%
!!! CTCAATATAATTTTCACATT+TGG + chr1_4:55484620-55484639 Msa0170990:intron 20.0%
!! TCTTGATGAAATGATTAATT+TGG + chr1_4:55484655-55484674 Msa0170990:intron 20.0%
!!! TATATTTATGCTCTAAATTC+GGG + chr1_4:55485282-55485301 Msa0170990:intron 20.0%
!! TGTAAATTAATCAAGTTTCA+TGG + chr1_4:55485973-55485992 Msa0170990:intron 20.0%
!!! AGATGCTAGAAAATTTTATA+TGG - chr1_4:55486290-55486309 None:intergenic 20.0%
!! AAACAAAATTGAAATTAGGA+GGG - chr1_4:55486322-55486341 None:intergenic 20.0%
!! TAAACAAAATTGAAATTAGG+AGG - chr1_4:55486323-55486342 None:intergenic 20.0%
!!! ATCACTCTTAAATTTTTGAA+TGG + chr1_4:55486343-55486362 Msa0170990:intron 20.0%
!! AAGTACATTGAAAGATTATT+AGG + chr1_4:55486410-55486429 Msa0170990:intron 20.0%
!! AATTCCATTCAAAAATACAT+AGG + chr1_4:55486603-55486622 Msa0170990:intron 20.0%
!!! ATATTTGTTAGGATAGTTTA+GGG - chr1_4:55486780-55486799 None:intergenic 20.0%
!!! AATATTTGTTAGGATAGTTT+AGG - chr1_4:55486781-55486800 None:intergenic 20.0%
!! CTATTTATATAGAAAGAATG+GGG - chr1_4:55487765-55487784 None:intergenic 20.0%
!! AAAATTCATCCATTGTTTAA+AGG + chr1_4:55481363-55481382 Msa0170990:intron 20.0%
!! GTCTATAATTTCATTATTCT+AGG + chr1_4:55488214-55488233 Msa0170990:intron 20.0%
!! TTAATCACGTTAAAAAAATG+TGG + chr1_4:55488492-55488511 Msa0170990:intron 20.0%
!! GTTAATCACATGTAAAATTA+TGG - chr1_4:55488622-55488641 None:intergenic 20.0%
!! ATTACAATGTATATGAATCT+TGG + chr1_4:55488917-55488936 Msa0170990:intron 20.0%
!! AATTGATGAATTGTTTGATA+TGG + chr1_4:55489089-55489108 Msa0170990:CDS 20.0%
!! AGGATTTCTACTATTATAAT+TGG + chr1_4:55489120-55489139 Msa0170990:CDS 20.0%
!! TAAAGACTAAGTATATTATG+GGG + chr1_4:55489347-55489366 Msa0170990:intron 20.0%
!! ATGTATAAATTCAGAAAACA+AGG + chr1_4:55489813-55489832 Msa0170990:CDS 20.0%
!!! AAGTTATTTTGTATAATTGC+TGG - chr1_4:55489850-55489869 None:intergenic 20.0%
!! GCAATTATACAAAATAACTT+TGG + chr1_4:55489850-55489869 Msa0170990:intron 20.0%
!! CTTGAATTAATTCCATTATT+GGG - chr1_4:55490241-55490260 None:intergenic 20.0%
!! ACTTGAATTAATTCCATTAT+TGG - chr1_4:55490242-55490261 None:intergenic 20.0%
!!! AATAATGGAATTAATTCAAG+TGG + chr1_4:55490241-55490260 Msa0170990:CDS 20.0%
! CAAATTTGTGAAAAAAGCTT+GGG + chr1_4:55481318-55481337 Msa0170990:CDS 25.0%
!! AACAATGGATGAATTTTCTA+GGG - chr1_4:55481360-55481379 None:intergenic 25.0%
!! AAACAATGGATGAATTTTCT+AGG - chr1_4:55481361-55481380 None:intergenic 25.0%
! TTCATCCATTGTTTAAAAGT+AGG + chr1_4:55481367-55481386 Msa0170990:intron 25.0%
!!! CTATTCCTACTTTTAAACAA+TGG - chr1_4:55481375-55481394 None:intergenic 25.0%
! TACTTGAAACCTTTATATGA+TGG + chr1_4:55481421-55481440 Msa0170990:CDS 25.0%
!!! CTTCACATTTTAACAAAGTA+TGG - chr1_4:55481523-55481542 None:intergenic 25.0%
! GTTTCAAAATTTAACTGCAA+GGG - chr1_4:55481560-55481579 None:intergenic 25.0%
!! AAAAGTGTAAACAGAATATG+TGG + chr1_4:55481786-55481805 Msa0170990:CDS 25.0%
!!! ATTTTATTTAATACTCCCTC+CGG + chr1_4:55482020-55482039 Msa0170990:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG - chr1_4:55482042-55482061 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG - chr1_4:55482047-55482066 None:intergenic 25.0%
! TCAACAAAAGTGAATGTATT+TGG - chr1_4:55482106-55482125 None:intergenic 25.0%
! CCTATTTACAAGAGAAATTT+AGG - chr1_4:55482129-55482148 None:intergenic 25.0%
! CCTAAATTTCTCTTGTAAAT+AGG + chr1_4:55482126-55482145 Msa0170990:intron 25.0%
! TGGTATAAATCTTGAAAATG+TGG - chr1_4:55482366-55482385 None:intergenic 25.0%
! CAATTCATCAATTCTATAAC+CGG - chr1_4:55482456-55482475 None:intergenic 25.0%
! TGAAGTTCCAATTATAATAG+TGG - chr1_4:55482504-55482523 None:intergenic 25.0%
! ATATTAAATGCACAAGTCTT+CGG - chr1_4:55482643-55482662 None:intergenic 25.0%
! CATGTTAAAGCAATTAAAAG+TGG - chr1_4:55482715-55482734 None:intergenic 25.0%
! TATAATTATTGGTACGTATG+TGG + chr1_4:55482854-55482873 Msa0170990:intron 25.0%
! TGAGTCTAACAAAAATTTGA+TGG + chr1_4:55482919-55482938 Msa0170990:CDS 25.0%
! GAGTCTAACAAAAATTTGAT+GGG + chr1_4:55482920-55482939 Msa0170990:CDS 25.0%
!! TAAATTAATTTAAGGGTGCA+TGG - chr1_4:55483020-55483039 None:intergenic 25.0%
!!! TTTTAAGATATTGCTTCCAT+GGG - chr1_4:55483175-55483194 None:intergenic 25.0%
!!! ATTTTAAGATATTGCTTCCA+TGG - chr1_4:55483176-55483195 None:intergenic 25.0%
! TGGAAGCAATATCTTAAAAT+TGG + chr1_4:55483176-55483195 Msa0170990:intron 25.0%
! TTGCATAAATTCAGAAAACA+AGG + chr1_4:55483244-55483263 Msa0170990:CDS 25.0%
! TACCTATATACTTAATCTTG+AGG + chr1_4:55483367-55483386 Msa0170990:intron 25.0%
!!! TAATAAATTCTGAAGCTCTA+GGG - chr1_4:55483582-55483601 None:intergenic 25.0%
!!! TTAATAAATTCTGAAGCTCT+AGG - chr1_4:55483583-55483602 None:intergenic 25.0%
!!! TTTGCATTTTTTTGTGTGTT+TGG - chr1_4:55483614-55483633 None:intergenic 25.0%
! ACACAAAAAAATGCAAAAGA+AGG + chr1_4:55483617-55483636 Msa0170990:intron 25.0%
! GCAAAATTAATGATATTTGG+AGG - chr1_4:55484062-55484081 None:intergenic 25.0%
!! TACTAATGCGTTTCTTTTTA+TGG + chr1_4:55484084-55484103 Msa0170990:intron 25.0%
! CAATAGCTTATGTTTGAATT+AGG - chr1_4:55484568-55484587 None:intergenic 25.0%
! TTTCACATTTGGATTAAATG+CGG + chr1_4:55484631-55484650 Msa0170990:intron 25.0%
! ATTTGCATCACTTGTAAAAA+CGG + chr1_4:55484930-55484949 Msa0170990:intron 25.0%
! GAATGAGAAAATGAATTCAT+TGG + chr1_4:55485386-55485405 Msa0170990:intron 25.0%
!! ATACAATGAGATTTTCTCAA+TGG + chr1_4:55485497-55485516 Msa0170990:intron 25.0%
! TGGTAAAATATTGTTCTACA+AGG + chr1_4:55485517-55485536 Msa0170990:intron 25.0%
! GGTAAAATATTGTTCTACAA+GGG + chr1_4:55485518-55485537 Msa0170990:intron 25.0%
! CTTTAACGAAACAATCTAAA+TGG + chr1_4:55485617-55485636 Msa0170990:intron 25.0%
! AATCTAAATGGATAACTTAG+AGG + chr1_4:55485629-55485648 Msa0170990:intron 25.0%
! ATCTAAATGGATAACTTAGA+GGG + chr1_4:55485630-55485649 Msa0170990:intron 25.0%
!! TTTAGAACAAACCTTTGTAT+GGG + chr1_4:55485681-55485700 Msa0170990:intron 25.0%
! TATCATCCATATATAGAAGT+AGG - chr1_4:55485832-55485851 None:intergenic 25.0%
! ATATATGGATGATATCTTGA+TGG + chr1_4:55485838-55485857 Msa0170990:intron 25.0%
! ATGCTCTATTTAAGTAGTTA+AGG + chr1_4:55486051-55486070 Msa0170990:intron 25.0%
!! TTTTCCTCTTAACAAAAAAG+TGG + chr1_4:55486253-55486272 Msa0170990:intron 25.0%
!! TTAACAAAAAAGTGGCATTT+TGG + chr1_4:55486261-55486280 Msa0170990:intron 25.0%
!! TGCTAGAAAATTTTATATGG+AGG - chr1_4:55486287-55486306 None:intergenic 25.0%
!! CTTAAATTTTTGAATGGCTT+TGG + chr1_4:55486349-55486368 Msa0170990:intron 25.0%
!!! TTATTAGGTTGCAATTTTCA+TGG + chr1_4:55486425-55486444 Msa0170990:intron 25.0%
!!! TATTAGGTTGCAATTTTCAT+GGG + chr1_4:55486426-55486445 Msa0170990:intron 25.0%
! TTATTATGGTGTGATTCATA+TGG + chr1_4:55486464-55486483 Msa0170990:intron 25.0%
! AAAATTGTACATGTGTATTG+TGG + chr1_4:55486487-55486506 Msa0170990:intron 25.0%
! GTAATGAGTGAATATTTGTT+AGG - chr1_4:55486791-55486810 None:intergenic 25.0%
! AACAAATATTCACTCATTAC+AGG + chr1_4:55486791-55486810 Msa0170990:intron 25.0%
! AAAATTTGCAAAGAACGTTA+GGG + chr1_4:55486873-55486892 Msa0170990:intron 25.0%
! TTGATTATGTTAACTCGAAA+GGG - chr1_4:55487047-55487066 None:intergenic 25.0%
! TTTGATTATGTTAACTCGAA+AGG - chr1_4:55487048-55487067 None:intergenic 25.0%
!!! GTGTTTTTGTTTGTTTATGA+GGG - chr1_4:55487354-55487373 None:intergenic 25.0%
!!! TGTGTTTTTGTTTGTTTATG+AGG - chr1_4:55487355-55487374 None:intergenic 25.0%
!!! TAACTGTCTTTTTTAGATTC+GGG - chr1_4:55487423-55487442 None:intergenic 25.0%
!!! GTAACTGTCTTTTTTAGATT+CGG - chr1_4:55487424-55487443 None:intergenic 25.0%
! ATCTAAAAAAGACAGTTACA+CGG + chr1_4:55487425-55487444 Msa0170990:intron 25.0%
! TTTAATGTCATTGTACACAT+AGG - chr1_4:55487554-55487573 None:intergenic 25.0%
!! AAACTATACTCCTTTAGTTT+GGG + chr1_4:55487785-55487804 Msa0170990:intron 25.0%
!! CATTATAGTTATAGAGCATT+TGG + chr1_4:55487818-55487837 Msa0170990:intron 25.0%
!!! CAAATTTTTGAAGAAAGCTT+GGG + chr1_4:55487997-55488016 Msa0170990:CDS 25.0%
!! AAACAATGGATGAATTTTCT+TGG - chr1_4:55481361-55481380 None:intergenic 25.0%
!! ATTTCATTATTCTAGGAGTA+AGG + chr1_4:55488221-55488240 Msa0170990:intron 25.0%
!! TTTCATTATTCTAGGAGTAA+GGG + chr1_4:55488222-55488241 Msa0170990:intron 25.0%
! CAGAGTTAACTGTTAATTTA+AGG + chr1_4:55488313-55488332 Msa0170990:intron 25.0%
! TATATAGACTATCAAATTGC+AGG + chr1_4:55488689-55488708 Msa0170990:intron 25.0%
! ATAACGTGTCTATCTATTAA+GGG - chr1_4:55489323-55489342 None:intergenic 25.0%
! AATAACGTGTCTATCTATTA+AGG - chr1_4:55489324-55489343 None:intergenic 25.0%
!! ATTGTGTACAAATGTGTTTT+AGG + chr1_4:55489461-55489480 Msa0170990:intron 25.0%
! TTGAATTTATTAGAAACCCT+AGG - chr1_4:55489607-55489626 None:intergenic 25.0%
!! GTCAAATAAACTTGATAGTT+TGG + chr1_4:55490103-55490122 Msa0170990:intron 25.0%
! AAAAATGGAAATCCCAATAA+TGG + chr1_4:55490226-55490245 Msa0170990:CDS 25.0%
TGACTAATGAAAAGGTAGAA+TGG + chr1_4:55481206-55481225 Msa0170990:CDS 30.0%
TTTCACAAATTTGCACAACT+TGG - chr1_4:55481311-55481330 None:intergenic 30.0%
GCAAATTTGTGAAAAAAGCT+TGG + chr1_4:55481317-55481336 Msa0170990:CDS 30.0%
AAAAGTAGGAATAGCACTTA+CGG + chr1_4:55481381-55481400 Msa0170990:intron 30.0%
! AAACCTTTATATGATGGTGT+TGG + chr1_4:55481427-55481446 Msa0170990:CDS 30.0%
!!! TTTAACTGCAAGGGTATTTT+AGG - chr1_4:55481551-55481570 None:intergenic 30.0%
CGTTTCAAAATTTAACTGCA+AGG - chr1_4:55481561-55481580 None:intergenic 30.0%
TATAGACACACACACATATA+TGG - chr1_4:55481645-55481664 None:intergenic 30.0%
TTTACCTAGTAGAAAAAGTG+AGG - chr1_4:55481898-55481917 None:intergenic 30.0%
ATTTCTCTTGTAAATAGGAC+CGG + chr1_4:55482131-55482150 Msa0170990:intron 30.0%
!! TATTTCTGGTATTTACGTGT+CGG + chr1_4:55482164-55482183 Msa0170990:intron 30.0%
!!! ATAAAGGCTCGTTTTGATTA+TGG + chr1_4:55482389-55482408 Msa0170990:CDS 30.0%
ATTTATCCTCACTTTCAGTT+TGG + chr1_4:55482421-55482440 Msa0170990:CDS 30.0%
! TTCAGTTTGGTTTCAATATC+CGG + chr1_4:55482434-55482453 Msa0170990:CDS 30.0%
! GGTAATTAAAATCTCTAGGA+AGG - chr1_4:55482999-55483018 None:intergenic 30.0%
GCATGGTAATTAAAATCTCT+AGG - chr1_4:55483003-55483022 None:intergenic 30.0%
TGCCTCAAGATTAAGTATAT+AGG - chr1_4:55483372-55483391 None:intergenic 30.0%
CAAAAAAATGCAAAAGAAGG+TGG + chr1_4:55483620-55483639 Msa0170990:intron 30.0%
ATGTATCATGTAGTATGTCA+TGG - chr1_4:55483944-55483963 None:intergenic 30.0%
! TTTTGCACAGTGAGATTTTA+AGG - chr1_4:55484192-55484211 None:intergenic 30.0%
GTTCATAAGAGAAATCAAGA+GGG - chr1_4:55484513-55484532 None:intergenic 30.0%
GAAAATTATATTGAGACGGA+GGG - chr1_4:55484615-55484634 None:intergenic 30.0%
TGAAAATTATATTGAGACGG+AGG - chr1_4:55484616-55484635 None:intergenic 30.0%
CTAACTACAGTTAATAAGAC+TGG - chr1_4:55484717-55484736 None:intergenic 30.0%
TAGTTAGTTGAGTAGTTAAG+TGG + chr1_4:55484730-55484749 Msa0170990:intron 30.0%
!!! GACAATTATTTTGAGACAGA+TGG + chr1_4:55484857-55484876 Msa0170990:intron 30.0%
! TTTGAGACAGATGGAAATTA+AGG + chr1_4:55484866-55484885 Msa0170990:intron 30.0%
!! TGGAAATTAAGGTTTGCTTT+TGG + chr1_4:55484877-55484896 Msa0170990:intron 30.0%
TTTGCATCACTTGTAAAAAC+GGG + chr1_4:55484931-55484950 Msa0170990:intron 30.0%
! ATACTTCCATGACATAGTTT+TGG + chr1_4:55484956-55484975 Msa0170990:intron 30.0%
! CTCTGTAAAAACTTAGTTTG+AGG + chr1_4:55485105-55485124 Msa0170990:intron 30.0%
! TGTAAAAACTTAGTTTGAGG+TGG + chr1_4:55485108-55485127 Msa0170990:intron 30.0%
! GTAAAAACTTAGTTTGAGGT+GGG + chr1_4:55485109-55485128 Msa0170990:intron 30.0%
! TAAAAACTTAGTTTGAGGTG+GGG + chr1_4:55485110-55485129 Msa0170990:intron 30.0%
AGAACAAGGAAATCAAAGAA+TGG + chr1_4:55485352-55485371 Msa0170990:intron 30.0%
! GAACCAAAATTTAAAGCTTG+TGG + chr1_4:55485413-55485432 Msa0170990:intron 30.0%
!!! TCTCCACAAGCTTTAAATTT+TGG - chr1_4:55485419-55485438 None:intergenic 30.0%
GTTTGTAGAGGAAAAATCTA+AGG + chr1_4:55485652-55485671 Msa0170990:intron 30.0%
!! CTTTAGAACAAACCTTTGTA+TGG + chr1_4:55485680-55485699 Msa0170990:intron 30.0%
TCTGTTCCTACTTCTATATA+TGG + chr1_4:55485823-55485842 Msa0170990:intron 30.0%
TGGAACACTTGAATTGATAT+AGG + chr1_4:55485993-55486012 Msa0170990:intron 30.0%
!!! AATGCCACTTTTTTGTTAAG+AGG - chr1_4:55486260-55486279 None:intergenic 30.0%
! TGGAATTTTCTCATTGAGTA+TGG - chr1_4:55486590-55486609 None:intergenic 30.0%
!! GTCTCCTATGTATTTTTGAA+TGG - chr1_4:55486610-55486629 None:intergenic 30.0%
AATAAAGAGCTACAAAGACT+AGG + chr1_4:55486683-55486702 Msa0170990:intron 30.0%
ATAAAGAGCTACAAAGACTA+GGG + chr1_4:55486684-55486703 Msa0170990:intron 30.0%
GAAAATTTGCAAAGAACGTT+AGG + chr1_4:55486872-55486891 Msa0170990:intron 30.0%
!!! GAACGTTAGGGTTTTAAAAT+TGG + chr1_4:55486885-55486904 Msa0170990:intron 30.0%
! TATGATTGTTGTTGTGTTCA+AGG - chr1_4:55486957-55486976 None:intergenic 30.0%
GAAACTATACTCCTTTAGTT+TGG + chr1_4:55487784-55487803 Msa0170990:intron 30.0%
CAACTTGAAATAAAGACCTA+CGG - chr1_4:55487975-55487994 None:intergenic 30.0%
!! GCAAATTTTTGAAGAAAGCT+TGG + chr1_4:55487996-55488015 Msa0170990:CDS 30.0%
TTCATCCATTGTTTAAAGGT+AGG + chr1_4:55488046-55488065 Msa0170990:intron 30.0%
CTATTCCTACCTTTAAACAA+TGG - chr1_4:55488054-55488073 None:intergenic 30.0%
TACTTGAATCCTTTGTATGA+TGG + chr1_4:55488100-55488119 Msa0170990:CDS 30.0%
TGCATTGAAAATTGTGAATG+AGG - chr1_4:55488588-55488607 None:intergenic 30.0%
ATTGTATGTGTGTGTACATA+TGG - chr1_4:55488899-55488918 None:intergenic 30.0%
ATAATCAAAACGAGCCTTTA+TGG - chr1_4:55482390-55482409 None:intergenic 30.0%
!!! ATAAAGGCTCGTTTTGATTA+TGG + chr1_4:55482389-55482408 Msa0170990:CDS 30.0%
ATTTATCCTAACTTTCAGCT+TGG + chr1_4:55489047-55489066 Msa0170990:CDS 30.0%
ATGGTGTAGACTTATCTTAA+GGG + chr1_4:55489265-55489284 Msa0170990:intron 30.0%
GGAGTCTAACAAAAAATTGA+TGG + chr1_4:55489523-55489542 Msa0170990:CDS 30.0%
ACACTCAGAAAATTCATATG+AGG - chr1_4:55489641-55489660 None:intergenic 30.0%
!!! TTTTAAGGTATTGCTTCCAT+GGG - chr1_4:55489744-55489763 None:intergenic 30.0%
!!! ATTTTAAGGTATTGCTTCCA+TGG - chr1_4:55489745-55489764 None:intergenic 30.0%
TGGAAGCAATACCTTAAAAT+TGG + chr1_4:55489745-55489764 Msa0170990:CDS 30.0%
TAACTTTGGATAGTGATATG+AGG + chr1_4:55489864-55489883 Msa0170990:intron 30.0%
ACAGTAAGATAATAACCCTA+AGG + chr1_4:55489951-55489970 Msa0170990:intron 30.0%
AATCTTCTTGATTTCATCTG+AGG - chr1_4:55490000-55490019 None:intergenic 30.0%
CTTCCAACACCATCATATAA+AGG - chr1_4:55481433-55481452 None:intergenic 35.0%
TGTTGGAAGAAATGCTATGT+GGG + chr1_4:55481444-55481463 Msa0170990:CDS 35.0%
GTACTCAAAGACTACAATCA+CGG - chr1_4:55481479-55481498 None:intergenic 35.0%
TAGTAAAGCAGGAGATCAAT+GGG + chr1_4:55481854-55481873 Msa0170990:CDS 35.0%
TACACACTAGTTATCGATCT+TGG + chr1_4:55482288-55482307 Msa0170990:intron 35.0%
TCAAAACGAGCCTTTATAGT+TGG - chr1_4:55482386-55482405 None:intergenic 35.0%
TTGAAACCAAACTGAAAGTG+AGG - chr1_4:55482430-55482449 None:intergenic 35.0%
!! TGGTCTAGAACTCTATGTTT+TGG + chr1_4:55482565-55482584 Msa0170990:intron 35.0%
!!! AGAACTCTATGTTTTGGTCA+CGG + chr1_4:55482571-55482590 Msa0170990:intron 35.0%
! CAATGATTCTTCTGTTGCTT+TGG - chr1_4:55482966-55482985 None:intergenic 35.0%
CAAAGCAACAGAAGAATCAT+TGG + chr1_4:55482964-55482983 Msa0170990:CDS 35.0%
TTCAGGCTAATTTAGCTAGA+TGG + chr1_4:55483117-55483136 Msa0170990:intron 35.0%
TCAGGCTAATTTAGCTAGAT+GGG + chr1_4:55483118-55483137 Msa0170990:intron 35.0%
! TCTTGCATTGATGCTCTTAT+TGG + chr1_4:55483221-55483240 Msa0170990:CDS 35.0%
AATCTTCATGATGTCATCTG+AGG - chr1_4:55483432-55483451 None:intergenic 35.0%
GTTGTCTGTTGAATGTTGTT+TGG - chr1_4:55483807-55483826 None:intergenic 35.0%
AAAAATCAAGACACTCCAGA+TGG + chr1_4:55483862-55483881 Msa0170990:CDS 35.0%
TCCAGATGGTTTGAAAAATG+AGG + chr1_4:55483876-55483895 Msa0170990:intron 35.0%
!! TCCTCATTTTTCAAACCATC+TGG - chr1_4:55483880-55483899 None:intergenic 35.0%
CACATAGACACACACATAAT+TGG - chr1_4:55484027-55484046 None:intergenic 35.0%
GAAAACACATTCTAAACACC+TGG + chr1_4:55484452-55484471 Msa0170990:intron 35.0%
CGTTCATAAGAGAAATCAAG+AGG - chr1_4:55484514-55484533 None:intergenic 35.0%
TTTCTCTTATGAACGTCTTG+TGG + chr1_4:55484519-55484538 Msa0170990:intron 35.0%
TTCTCTTATGAACGTCTTGT+GGG + chr1_4:55484520-55484539 Msa0170990:intron 35.0%
! GTTTTTACAGAGTAGCACTT+TGG - chr1_4:55485097-55485116 None:intergenic 35.0%
TATCTTGTCTCACTAGTTGA+AGG - chr1_4:55485136-55485155 None:intergenic 35.0%
ACTAGTGAGACAAGATAAGA+TGG + chr1_4:55485139-55485158 Msa0170990:intron 35.0%
CTAGTGAGACAAGATAAGAT+GGG + chr1_4:55485140-55485159 Msa0170990:intron 35.0%
TAGTGAGACAAGATAAGATG+GGG + chr1_4:55485141-55485160 Msa0170990:intron 35.0%
! TATGCTCTAAATTCGGGTTA+AGG + chr1_4:55485288-55485307 Msa0170990:intron 35.0%
! ATGCTCTAAATTCGGGTTAA+GGG + chr1_4:55485289-55485308 Msa0170990:intron 35.0%
CTCATAACCAAATACCTTCA+AGG + chr1_4:55485320-55485339 Msa0170990:intron 35.0%
ATAACCAAATACCTTCAAGG+AGG + chr1_4:55485323-55485342 Msa0170990:intron 35.0%
GGAAATCAAAGAATGGTCAA+AGG + chr1_4:55485359-55485378 Msa0170990:intron 35.0%
TGGAGATACCTTAGAAACAA+AGG + chr1_4:55485433-55485452 Msa0170990:intron 35.0%
GGAGATACCTTAGAAACAAA+GGG + chr1_4:55485434-55485453 Msa0170990:intron 35.0%
!! CACTCTAGAGTTGAAACAAA+TGG + chr1_4:55485566-55485585 Msa0170990:intron 35.0%
AAAGTAACCATGTAAGAACG+TGG - chr1_4:55485601-55485620 None:intergenic 35.0%
ATAACTTAGAGGGTTTGTAG+AGG + chr1_4:55485640-55485659 Msa0170990:intron 35.0%
CTATGTTTCAACCCATACAA+AGG - chr1_4:55485695-55485714 None:intergenic 35.0%
ATTTACTGCGATTAACGCTA+AGG - chr1_4:55486105-55486124 None:intergenic 35.0%
TAAAGAGCTACAAAGACTAG+GGG + chr1_4:55486685-55486704 Msa0170990:intron 35.0%
!!! AGGGTTTTAAAATTGGCGAA+TGG + chr1_4:55486892-55486911 Msa0170990:intron 35.0%
TTTGAATGTTGATACCGTGT+TGG - chr1_4:55486923-55486942 None:intergenic 35.0%
ACACGTAAGAACTCAGATTA+AGG + chr1_4:55486992-55487011 Msa0170990:intron 35.0%
CACGTAAGAACTCAGATTAA+GGG + chr1_4:55486993-55487012 Msa0170990:intron 35.0%
TTAACAGAACCACATCCTTT+CGG + chr1_4:55487097-55487116 Msa0170990:intron 35.0%
TATGTTCTTGATCAGCTTAG+GGG - chr1_4:55487169-55487188 None:intergenic 35.0%
CTATGTTCTTGATCAGCTTA+GGG - chr1_4:55487170-55487189 None:intergenic 35.0%
!!! CGACGTGTTGTTTGTTTTAT+GGG - chr1_4:55487219-55487238 None:intergenic 35.0%
!!! TCGACGTGTTGTTTGTTTTA+TGG - chr1_4:55487220-55487239 None:intergenic 35.0%
! AGTTTGAAATATCGTGGTGA+TGG - chr1_4:55487483-55487502 None:intergenic 35.0%
! TAGGCAAGTTTGAAATATCG+TGG - chr1_4:55487489-55487508 None:intergenic 35.0%
! TAGTTATAGAGCATTTGGCA+AGG + chr1_4:55487823-55487842 Msa0170990:intron 35.0%
! AGTTATAGAGCATTTGGCAA+GGG + chr1_4:55487824-55487843 Msa0170990:intron 35.0%
AAATATGGCTCATGATGACA+AGG + chr1_4:55487862-55487881 Msa0170990:intron 35.0%
AATATGGCTCATGATGACAA+GGG + chr1_4:55487863-55487882 Msa0170990:intron 35.0%
GAGTGGTAAAAGTAGTAGAA+TGG + chr1_4:55487885-55487904 Msa0170990:CDS 35.0%
! AGTAGTAGAATGGAGTATCA+AGG + chr1_4:55487895-55487914 Msa0170990:CDS 35.0%
!!! GAAATTTTAGCTCTCTTCCA+TGG - chr1_4:55487932-55487951 None:intergenic 35.0%
!! ATTTTTGAAGAAAGCTTGGG+AGG + chr1_4:55488000-55488019 Msa0170990:CDS 35.0%
AAAGGTAGGAATAGCACTTA+CGG + chr1_4:55488060-55488079 Msa0170990:intron 35.0%
! AATCCTTTGTATGATGGAGT+TGG + chr1_4:55488106-55488125 Msa0170990:CDS 35.0%
AGTTGGAAGAAATGCTATGT+GGG + chr1_4:55488123-55488142 Msa0170990:CDS 35.0%
ACCATATTCACTGTTTAACG+TGG + chr1_4:55488368-55488387 Msa0170990:intron 35.0%
ACCACGTTAAACAGTGAATA+TGG - chr1_4:55488372-55488391 None:intergenic 35.0%
TTAACCATGTGTTGCAGATT+AGG + chr1_4:55488419-55488438 Msa0170990:intron 35.0%
TAACCATGTGTTGCAGATTA+GGG + chr1_4:55488420-55488439 Msa0170990:intron 35.0%
ATGTGATTAACCATGTGTCA+CGG + chr1_4:55488631-55488650 Msa0170990:intron 35.0%
TAGTAAAGCAGGAAAGCAAT+TGG + chr1_4:55488793-55488812 Msa0170990:CDS 35.0%
CAATTGGAACCCATAATTGT+TGG + chr1_4:55488809-55488828 Msa0170990:CDS 35.0%
TTATACCTAGTAGAAAGAGC+AGG - chr1_4:55488838-55488857 None:intergenic 35.0%
AAGATTCATCCCAACCATAA+AGG + chr1_4:55488999-55489018 Msa0170990:CDS 35.0%
TTGAAACCAAGCTGAAAGTT+AGG - chr1_4:55489056-55489075 None:intergenic 35.0%
TTCAGCTTGGTTTCAATATC+TGG + chr1_4:55489060-55489079 Msa0170990:CDS 35.0%
CATGATTATTCGACCTGTTT+GGG + chr1_4:55489167-55489186 Msa0170990:CDS 35.0%
!!! GAACTCTATGTTTTAGTCAC+CGG + chr1_4:55489198-55489217 Msa0170990:CDS 35.0%
! TTGGAAGGTTAGTTCAAAGA+TGG + chr1_4:55489246-55489265 Msa0170990:intron 35.0%
GATGGTGTAGACTTATCTTA+AGG + chr1_4:55489264-55489283 Msa0170990:intron 35.0%
!!! CAAATGTGTTTTAGGTTGTG+TGG + chr1_4:55489469-55489488 Msa0170990:intron 35.0%
! CATTGATACTTCTGTTGCTT+TGG - chr1_4:55489570-55489589 None:intergenic 35.0%
!! CAAAGCAACAGAAGTATCAA+TGG + chr1_4:55489568-55489587 Msa0170990:CDS 35.0%
TTCAGGCTAATTTAGCAAGA+TGG + chr1_4:55489686-55489705 Msa0170990:intron 35.0%
TCAGGCTAATTTAGCAAGAT+GGG + chr1_4:55489687-55489706 Msa0170990:intron 35.0%
TTACTGTATATCGATCGAGA+AGG - chr1_4:55489938-55489957 None:intergenic 35.0%
AGCACAACATCAATGAAAGT+GGG + chr1_4:55490023-55490042 Msa0170990:CDS 35.0%
AATGCAAAAGAAACATCCCT+TGG + chr1_4:55490197-55490216 Msa0170990:CDS 35.0%
!! TTCCATTTTTGCATCACCAA+GGG - chr1_4:55490216-55490235 None:intergenic 35.0%
!! TTTCCATTTTTGCATCACCA+AGG - chr1_4:55490217-55490236 None:intergenic 35.0%
GGAATTAATTCAAGTGGTCA+CGG + chr1_4:55490247-55490266 Msa0170990:CDS 35.0%
!! GGACATTTCTGTTTTGAACT+TGG - chr1_4:55490348-55490367 None:intergenic 35.0%
AAAGGTAGAATGGAGAATCC+AGG + chr1_4:55481216-55481235 Msa0170990:CDS 40.0%
AAGAGAGCTGGAATTTCTTG+CGG + chr1_4:55481256-55481275 Msa0170990:CDS 40.0%
GTGAAAAAAGCTTGGGAGAT+TGG + chr1_4:55481325-55481344 Msa0170990:CDS 40.0%
GTGTTGGAAGAAATGCTATG+TGG + chr1_4:55481443-55481462 Msa0170990:CDS 40.0%
! TTCTAGCCTTTGGTGTACAT+TGG + chr1_4:55481826-55481845 Msa0170990:CDS 40.0%
! TCTAGCCTTTGGTGTACATT+GGG + chr1_4:55481827-55481846 Msa0170990:CDS 40.0%
CTAGTAAAGCAGGAGATCAA+TGG + chr1_4:55481853-55481872 Msa0170990:CDS 40.0%
CAATGGGAACCTGTAATTGT+TGG + chr1_4:55481870-55481889 Msa0170990:CDS 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr1_4:55482038-55482057 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr1_4:55482039-55482058 None:intergenic 40.0%
!!! GAACTCTATGTTTTGGTCAC+GGG + chr1_4:55482572-55482591 Msa0170990:intron 40.0%
! GTTTCAATTTTCGTCACCCA+TGG + chr1_4:55483156-55483175 Msa0170990:intron 40.0%
AGCAGAACCTCTATGAAAGT+AGG + chr1_4:55483455-55483474 Msa0170990:CDS 40.0%
GTTGTCACCTACTTTCATAG+AGG - chr1_4:55483465-55483484 None:intergenic 40.0%
TACTGAAATTGTAGCTCGTG+TGG + chr1_4:55483706-55483725 Msa0170990:CDS 40.0%
ACCAGAACAACAGAATGATG+AGG + chr1_4:55483835-55483854 Msa0170990:CDS 40.0%
TCCTCATCATTCTGTTGTTC+TGG - chr1_4:55483839-55483858 None:intergenic 40.0%
TATGCTCCAAAACACAAGAC+AGG - chr1_4:55484328-55484347 None:intergenic 40.0%
TTGGGACGAGATTCATAGAT+TGG + chr1_4:55484430-55484449 Msa0170990:intron 40.0%
CTAATGAGATCTCACTATCC+AGG - chr1_4:55484473-55484492 None:intergenic 40.0%
GGATAGTGAGATCTCATTAG+AGG + chr1_4:55484473-55484492 Msa0170990:intron 40.0%
ATGGCACCAAAACTATGTCA+TGG - chr1_4:55484965-55484984 None:intergenic 40.0%
!!! TGACATAGTTTTGGTGCCAT+TGG + chr1_4:55484965-55484984 Msa0170990:intron 40.0%
ACTCTGACATCAAGTTCAAG+TGG + chr1_4:55485172-55485191 Msa0170990:intron 40.0%
TTCAAGTGGAAGAAAACCGA+CGG + chr1_4:55485186-55485205 Msa0170990:intron 40.0%
TGATAATCATGAGCTACCGT+CGG - chr1_4:55485205-55485224 None:intergenic 40.0%
GGTAGCTCATGATTATCAGT+TGG + chr1_4:55485207-55485226 Msa0170990:intron 40.0%
AGCTCATGATTATCAGTTGG+CGG + chr1_4:55485210-55485229 Msa0170990:intron 40.0%
!! AATGCCTCCTTGAAGGTATT+TGG - chr1_4:55485330-55485349 None:intergenic 40.0%
!! CACACTACCCTTTGTTTCTA+AGG - chr1_4:55485444-55485463 None:intergenic 40.0%
!! TTGTTCTACAAGGGTGCTTA+TGG + chr1_4:55485527-55485546 Msa0170990:intron 40.0%
ACCCATGACACTATTTCCTT+GGG - chr1_4:55485718-55485737 None:intergenic 40.0%
AACCCATGACACTATTTCCT+TGG - chr1_4:55485719-55485738 None:intergenic 40.0%
TGATTCAATGCACTTGTCCT+GGG - chr1_4:55485872-55485891 None:intergenic 40.0%
ATGATTCAATGCACTTGTCC+TGG - chr1_4:55485873-55485892 None:intergenic 40.0%
TCTAACGACTCTCACTTGAT+AGG - chr1_4:55485947-55485966 None:intergenic 40.0%
ATGTGTATTGTGGCATGAGA+TGG + chr1_4:55486497-55486516 Msa0170990:intron 40.0%
CTCCTGTTTGGATTACACAT+GGG - chr1_4:55486724-55486743 None:intergenic 40.0%
ACTCCTGTTTGGATTACACA+TGG - chr1_4:55486725-55486744 None:intergenic 40.0%
CGTGATAAAAACAGACCAAG+TGG + chr1_4:55486749-55486768 Msa0170990:intron 40.0%
! TTGTTAGGATAGTTTAGGGC+TGG - chr1_4:55486776-55486795 None:intergenic 40.0%
TAACAGAACCACATCCTTTC+GGG + chr1_4:55487098-55487117 Msa0170990:intron 40.0%
TACAGTTTCACAAACCCGAA+AGG - chr1_4:55487115-55487134 None:intergenic 40.0%
! GATCTGGTCTCTTTTTGATG+TGG - chr1_4:55487138-55487157 None:intergenic 40.0%
CCTATGTTCTTGATCAGCTT+AGG - chr1_4:55487171-55487190 None:intergenic 40.0%
CCTAAGCTGATCAAGAACAT+AGG + chr1_4:55487168-55487187 Msa0170990:intron 40.0%
TTTATGGGTCTACGACTGTT+TGG - chr1_4:55487204-55487223 None:intergenic 40.0%
!! TGTTGGTGGTTTGTTTGGTT+GGG - chr1_4:55487278-55487297 None:intergenic 40.0%
AAAAACACAAAGACCCCGAA+GGG + chr1_4:55487366-55487385 Msa0170990:intron 40.0%
!! GCGTTGTTTGTTTGATTTGG+TGG - chr1_4:55487398-55487417 None:intergenic 40.0%
GTGGCGTTGTTTGTTTGATT+TGG - chr1_4:55487401-55487420 None:intergenic 40.0%
!!! CTGTCTTTTTTAGATTCGGG+TGG - chr1_4:55487420-55487439 None:intergenic 40.0%
TGACGATTTGCCCAAACTAA+AGG - chr1_4:55487798-55487817 None:intergenic 40.0%
! TGGAGTATCAAGGTAGAAGA+TGG + chr1_4:55487905-55487924 Msa0170990:CDS 40.0%
CTTCCAACTCCATCATACAA+AGG - chr1_4:55488112-55488131 None:intergenic 40.0%
GAGTTGGAAGAAATGCTATG+TGG + chr1_4:55488122-55488141 Msa0170990:CDS 40.0%
GTACTCAAAGACTACTACCA+CGG - chr1_4:55488158-55488177 None:intergenic 40.0%
TTTCCCTAATCTGCAACACA+TGG - chr1_4:55488426-55488445 None:intergenic 40.0%
TGTTGCAGATTAGGGAAAGT+CGG + chr1_4:55488428-55488447 Msa0170990:intron 40.0%
TTTCTCTATTCCGTGACACA+TGG - chr1_4:55488644-55488663 None:intergenic 40.0%
AGCAGGACTCCAACAATTAT+GGG - chr1_4:55488821-55488840 None:intergenic 40.0%
CAAAACGAGCCTTTATGGTT+GGG - chr1_4:55489011-55489030 None:intergenic 40.0%
TCAAAACGAGCCTTTATGGT+TGG - chr1_4:55489012-55489031 None:intergenic 40.0%
TGTTTGATATGGCACGACAA+AGG + chr1_4:55489100-55489119 Msa0170990:CDS 40.0%
GCATGATTATTCGACCTGTT+TGG + chr1_4:55489166-55489185 Msa0170990:CDS 40.0%
AAACTTGCCAACTCTTTGGA+AGG + chr1_4:55489231-55489250 Msa0170990:CDS 40.0%
GAACTAACCTTCCAAAGAGT+TGG - chr1_4:55489241-55489260 None:intergenic 40.0%
TGCCCTAGAGACTTATGTTA+AGG + chr1_4:55489382-55489401 Msa0170990:intron 40.0%
CGCCTTAACATAAGTCTCTA+GGG - chr1_4:55489387-55489406 None:intergenic 40.0%
ATGGTATAAACCAGCTTCCT+AGG + chr1_4:55489587-55489606 Msa0170990:intron 40.0%
TGGTATAAACCAGCTTCCTA+GGG + chr1_4:55489588-55489607 Msa0170990:intron 40.0%
TATTAGAAACCCTAGGAAGC+TGG - chr1_4:55489600-55489619 None:intergenic 40.0%
! GCATTGTGGCTCCAATTTTA+AGG - chr1_4:55489759-55489778 None:intergenic 40.0%
! TCCTGTATTGATGCTCTTGT+TGG + chr1_4:55489790-55489809 Msa0170990:CDS 40.0%
!! TCCAACAAGAGCATCAATAC+AGG - chr1_4:55489794-55489813 None:intergenic 40.0%
GAGCACAACATCAATGAAAG+TGG + chr1_4:55490022-55490041 Msa0170990:CDS 40.0%
TCTTAAGACACTTGCAGAGT+TGG - chr1_4:55490051-55490070 None:intergenic 40.0%
!! ATCCCTTGGTGATGCAAAAA+TGG + chr1_4:55490211-55490230 Msa0170990:CDS 40.0%
TGGAGAATCCAGGTAGAAGA+TGG + chr1_4:55481226-55481245 Msa0170990:CDS 45.0%
GAAATTCCAGCTCTCTTCCA+TGG - chr1_4:55481253-55481272 None:intergenic 45.0%
TGGAATTTCTTGCGGCATGT+GGG + chr1_4:55481264-55481283 Msa0170990:CDS 45.0%
GTAGTCTTTGAGTACACTGC+CGG + chr1_4:55481484-55481503 Msa0170990:CDS 45.0%
GTATGGTTAGCACTACGTAC+CGG - chr1_4:55481506-55481525 None:intergenic 45.0%
ATATGTGGAACTACCCTTGC+CGG + chr1_4:55481801-55481820 Msa0170990:CDS 45.0%
AGCAACCCAATGTACACCAA+AGG - chr1_4:55481835-55481854 None:intergenic 45.0%
! CATTGGGTTGCTAGTAAAGC+AGG + chr1_4:55481843-55481862 Msa0170990:CDS 45.0%
AGTGAGGCTCCAACAATTAC+AGG - chr1_4:55481882-55481901 None:intergenic 45.0%
!!! GGAGCCTCACTTTTTCTACT+AGG + chr1_4:55481891-55481910 Msa0170990:CDS 45.0%
TCTCTTGTAAATAGGACCGG+AGG + chr1_4:55482134-55482153 Msa0170990:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG + chr1_4:55482135-55482154 Msa0170990:intron 45.0%
CCAGAAATAACTACTCCCTC+CGG - chr1_4:55482153-55482172 None:intergenic 45.0%
!! GTATTTACGTGTCGGTGTCA+TGG + chr1_4:55482172-55482191 Msa0170990:intron 45.0%
AAACTCGCCAACTCTTTGCA+AGG + chr1_4:55482605-55482624 Msa0170990:intron 45.0%
AAGCTGACCTTGCAAAGAGT+TGG - chr1_4:55482615-55482634 None:intergenic 45.0%
TATTGGTACGTATGTGGTGC+AGG + chr1_4:55482860-55482879 Msa0170990:intron 45.0%
! GTTAGACTCACTTGCTGCTT+GGG - chr1_4:55482909-55482928 None:intergenic 45.0%
! TGTTAGACTCACTTGCTGCT+TGG - chr1_4:55482910-55482929 None:intergenic 45.0%
AAATTGAAACGCCCATGAGC+AGG - chr1_4:55483146-55483165 None:intergenic 45.0%
GCAATTATGTCCCAACTACG+AGG + chr1_4:55484226-55484245 Msa0170990:intron 45.0%
AACTAAGGGTTGAGTGCGTT+TGG + chr1_4:55484411-55484430 Msa0170990:intron 45.0%
ACTAAGGGTTGAGTGCGTTT+GGG + chr1_4:55484412-55484431 Msa0170990:intron 45.0%
CACACATCCACACACATCAA+TGG - chr1_4:55485011-55485030 None:intergenic 45.0%
!! TGTCATAGCTTTGGTGCCAT+TGG - chr1_4:55485074-55485093 None:intergenic 45.0%
!! GCACTTTGGTGTCATAGCTT+TGG - chr1_4:55485083-55485102 None:intergenic 45.0%
TGAGACAAGATAAGATGGGG+AGG + chr1_4:55485144-55485163 Msa0170990:intron 45.0%
GCTCATGATTATCAGTTGGC+GGG + chr1_4:55485211-55485230 Msa0170990:intron 45.0%
ATTATCAGTTGGCGGGAGAT+AGG + chr1_4:55485218-55485237 Msa0170990:intron 45.0%
TTATCAGTTGGCGGGAGATA+GGG + chr1_4:55485219-55485238 Msa0170990:intron 45.0%
GTTCTCAAATGCCTCCTTGA+AGG - chr1_4:55485337-55485356 None:intergenic 45.0%
!! CAAGGAGGCATTTGAGAACA+AGG + chr1_4:55485338-55485357 Msa0170990:intron 45.0%
GTGAAGACCACGTTCTTACA+TGG + chr1_4:55485591-55485610 Msa0170990:intron 45.0%
! ATGGGTTGAAACATAGCCCA+AGG + chr1_4:55485699-55485718 Msa0170990:intron 45.0%
AGCCCAAGGAAATAGTGTCA+TGG + chr1_4:55485713-55485732 Msa0170990:intron 45.0%
GCCCAAGGAAATAGTGTCAT+GGG + chr1_4:55485714-55485733 Msa0170990:intron 45.0%
! TCTTGATGGTAACATAGCCC+AGG + chr1_4:55485852-55485871 Msa0170990:intron 45.0%
GACCCATGTGTAATCCAAAC+AGG + chr1_4:55486719-55486738 Msa0170990:intron 45.0%
TATCACGACGTACTCCTGTT+TGG - chr1_4:55486736-55486755 None:intergenic 45.0%
GAATGTTGATACCGTGTTGG+CGG - chr1_4:55486920-55486939 None:intergenic 45.0%
TGTTGTGTTCAAGGAGCTGT+TGG - chr1_4:55486948-55486967 None:intergenic 45.0%
TGTTAACTCGAAAGGGTCAG+TGG - chr1_4:55487040-55487059 None:intergenic 45.0%
! GTGGTTCTGTTAACCTGAGA+GGG - chr1_4:55487090-55487109 None:intergenic 45.0%
! TGTGGTTCTGTTAACCTGAG+AGG - chr1_4:55487091-55487110 None:intergenic 45.0%
TTCACAAACCCGAAAGGATG+TGG - chr1_4:55487109-55487128 None:intergenic 45.0%
!!! TTGATGGTGGTTTTCGTGTG+TGG - chr1_4:55487255-55487274 None:intergenic 45.0%
!! TTGTTTGGTTGGGTTGATGG+TGG - chr1_4:55487268-55487287 None:intergenic 45.0%
!! GGTTTGTTTGGTTGGGTTGA+TGG - chr1_4:55487271-55487290 None:intergenic 45.0%
!! GTGTTGGTGGTTTGTTTGGT+TGG - chr1_4:55487279-55487298 None:intergenic 45.0%
!! ACGAATTGGTTTGGTGGTCT+CGG - chr1_4:55487301-55487320 None:intergenic 45.0%
TCTTCGCTGACGAATTGGTT+TGG - chr1_4:55487310-55487329 None:intergenic 45.0%
CAAAAACACAAAGACCCCGA+AGG + chr1_4:55487365-55487384 Msa0170990:intron 45.0%
TCAAGGTAGAAGATGGTCCA+TGG + chr1_4:55487912-55487931 Msa0170990:CDS 45.0%
AGCATGTGTGCATTTACCGT+AGG + chr1_4:55487956-55487975 Msa0170990:CDS 45.0%
TTTGAAGAAAGCTTGGGAGG+TGG + chr1_4:55488003-55488022 Msa0170990:intron 45.0%
TTGAAGAAAGCTTGGGAGGT+GGG + chr1_4:55488004-55488023 Msa0170990:intron 45.0%
GTAGTCTTTGAGTACACTGC+TGG + chr1_4:55481484-55481503 Msa0170990:CDS 45.0%
TACGCCAAAGGCTAGAAATC+CGG - chr1_4:55488762-55488781 None:intergenic 45.0%
! TTCTAGCCTTTGGCGTACAT+TGG + chr1_4:55488765-55488784 Msa0170990:CDS 45.0%
! TCTAGCCTTTGGCGTACATT+GGG + chr1_4:55488766-55488785 Msa0170990:CDS 45.0%
! CATTGGGTTGCTAGTAAAGC+AGG + chr1_4:55481843-55481862 Msa0170990:CDS 45.0%
GAGCAGGACTCCAACAATTA+TGG - chr1_4:55488822-55488841 None:intergenic 45.0%
ATTATTCGACCTGTTTGGGC+TGG + chr1_4:55489171-55489190 Msa0170990:CDS 45.0%
AAGAGTTGGCAAGTTTGTCG+AGG - chr1_4:55489227-55489246 None:intergenic 45.0%
CGACAAACTTGCCAACTCTT+TGG + chr1_4:55489227-55489246 Msa0170990:CDS 45.0%
GCGCCTTAACATAAGTCTCT+AGG - chr1_4:55489388-55489407 None:intergenic 45.0%
TGAAGCTCAATCAGCAAGTG+CGG + chr1_4:55489502-55489521 Msa0170990:CDS 45.0%
ACGAAAATTGAAGCGACCGT+GGG - chr1_4:55489719-55489738 None:intergenic 45.0%
! GCTTCAATTTTCGTCACCCA+TGG + chr1_4:55489725-55489744 Msa0170990:CDS 45.0%
TCGATTGAGCATCACCTCTA+CGG + chr1_4:55489890-55489909 Msa0170990:intron 45.0%
TACGGAACATTGCTGCAGTT+TGG + chr1_4:55489908-55489927 Msa0170990:intron 45.0%
TACTGAAACTGTAGCTCGTG+TGG + chr1_4:55490283-55490302 Msa0170990:CDS 45.0%
!! ATGATTATAATTATAATTAT+TGG + chr1_4:55482843-55482862 Msa0170990:intron 5.0%
!!! TGTAAAATTAATAAATTTTT+AGG - chr1_4:55483337-55483356 None:intergenic 5.0%
!!! ATTACTATTTTTTAAAAATA+TGG + chr1_4:55487847-55487866 Msa0170990:intron 5.0%
!!! AATATGATTTTAATAAATTT+TGG - chr1_4:55490160-55490179 None:intergenic 5.0%
TCCAGGTAGAAGATGGTCCA+TGG + chr1_4:55481233-55481252 Msa0170990:CDS 50.0%
TCCATGGACCATCTTCTACC+TGG - chr1_4:55481237-55481256 None:intergenic 50.0%
CTGGAATTTCTTGCGGCATG+TGG + chr1_4:55481263-55481282 Msa0170990:CDS 50.0%
TATGTGGAACTACCCTTGCC+GGG + chr1_4:55481802-55481821 Msa0170990:CDS 50.0%
TACACCAAAGGCTAGAAGCC+CGG - chr1_4:55481823-55481842 None:intergenic 50.0%
! CCGGAGGGAGTAGTTATTTC+TGG + chr1_4:55482150-55482169 Msa0170990:intron 50.0%
!! TTACGTGTCGGTGTCATGGT+TGG + chr1_4:55482176-55482195 Msa0170990:intron 50.0%
! GTTCTAGACCAGCCCAAACA+GGG - chr1_4:55482556-55482575 None:intergenic 50.0%
!! AGTTCTAGACCAGCCCAAAC+AGG - chr1_4:55482557-55482576 None:intergenic 50.0%
AAGAGTTGGCGAGTTTGTCG+AGG - chr1_4:55482601-55482620 None:intergenic 50.0%
ACACAATGTCCTATCGCAGC+AGG + chr1_4:55484292-55484311 Msa0170990:intron 50.0%
CACAATGTCCTATCGCAGCA+GGG + chr1_4:55484293-55484312 Msa0170990:intron 50.0%
!! GAGGCACCTGTCTTGTGTTT+TGG + chr1_4:55484319-55484338 Msa0170990:intron 50.0%
!! TTTGGTGCCATTGGTGCCAT+TGG + chr1_4:55484974-55484993 Msa0170990:intron 50.0%
!! TTGGTGCCATTGGTGCCATT+GGG + chr1_4:55484975-55484994 Msa0170990:intron 50.0%
GATTTCCCCAATGGCACCAA+TGG - chr1_4:55484984-55485003 None:intergenic 50.0%
AATGGCCAGGATTTCCCCAA+TGG - chr1_4:55484993-55485012 None:intergenic 50.0%
ATCCTGGCCATTGATGTGTG+TGG + chr1_4:55485001-55485020 Msa0170990:intron 50.0%
ATCCACACACATCAATGGCC+AGG - chr1_4:55485006-55485025 None:intergenic 50.0%
GTGTGTGTGATGTGTGTGTG+TGG + chr1_4:55485028-55485047 Msa0170990:intron 50.0%
TGTGTGATGTGTGTGTGTGG+TGG + chr1_4:55485031-55485050 Msa0170990:intron 50.0%
! TGTGGTGGAGATGCAAGCTA+TGG + chr1_4:55485046-55485065 Msa0170990:intron 50.0%
GATGCAAGCTATGGCACCAA+TGG + chr1_4:55485055-55485074 Msa0170990:intron 50.0%
TATCAGTTGGCGGGAGATAG+GGG + chr1_4:55485220-55485239 Msa0170990:intron 50.0%
!! TAGTTTAGGGCTGGTCCACT+TGG - chr1_4:55486767-55486786 None:intergenic 50.0%
! CGAGTTTTCGAAACCCTCTC+AGG + chr1_4:55487074-55487093 Msa0170990:intron 50.0%
CTTAGGGGTGGTTGAAGATC+TGG - chr1_4:55487154-55487173 None:intergenic 50.0%
GTTCTTGATCAGCTTAGGGG+TGG - chr1_4:55487166-55487185 None:intergenic 50.0%
!! CTCGGTGTTGGTGGTTTGTT+TGG - chr1_4:55487283-55487302 None:intergenic 50.0%
!! TCGCTGACGAATTGGTTTGG+TGG - chr1_4:55487307-55487326 None:intergenic 50.0%
TCGGATCTTCGCTGACGAAT+TGG - chr1_4:55487315-55487334 None:intergenic 50.0%
! ATTTGGTGGCAGACTCCCTT+CGG - chr1_4:55487384-55487403 None:intergenic 50.0%
ATATGTGGAACTACCCTCGC+CGG + chr1_4:55488740-55488759 Msa0170990:CDS 50.0%
AAAGGCTAGAAATCCGGCGA+GGG - chr1_4:55488756-55488775 None:intergenic 50.0%
AGCAACCCAATGTACGCCAA+AGG - chr1_4:55488774-55488793 None:intergenic 50.0%
GGAGTCCTGCTCTTTCTACT+AGG + chr1_4:55488830-55488849 Msa0170990:CDS 50.0%
!! AGTTCTAGACCAGCCCAAAC+AGG - chr1_4:55482557-55482576 None:intergenic 50.0%
GGCAAGTTTGTCGAGGTTTC+CGG - chr1_4:55489220-55489239 None:intergenic 50.0%
GACGAAAATTGAAGCGACCG+TGG - chr1_4:55489720-55489739 None:intergenic 50.0%
! GGAAGCACATCTACGCATTG+TGG - chr1_4:55489773-55489792 None:intergenic 50.0%
ACTGCAGCAATGTTCCGTAG+AGG - chr1_4:55489907-55489926 None:intergenic 50.0%
GATGGTCCATGGAAGAGAGC+TGG + chr1_4:55481244-55481263 Msa0170990:CDS 55.0%
AAAGGCTAGAAGCCCGGCAA+GGG - chr1_4:55481817-55481836 None:intergenic 55.0%
CACGACTGTTCGCCCTGTTT+GGG + chr1_4:55482541-55482560 Msa0170990:CDS 55.0%
CTAGATGGGAGCCTGCTCAT+GGG + chr1_4:55483132-55483151 Msa0170990:intron 55.0%
ATGCTAGGCGCCTCGTAGTT+GGG - chr1_4:55484239-55484258 None:intergenic 55.0%
! AACTACGAGGCGCCTAGCAT+GGG + chr1_4:55484239-55484258 Msa0170990:intron 55.0%
!! TGGTGCCATTGGTGCCATTG+GGG + chr1_4:55484976-55484995 Msa0170990:intron 55.0%
!! TGGTGCCATTGGGGAAATCC+TGG + chr1_4:55484985-55485004 Msa0170990:intron 55.0%
ATCAGTTGGCGGGAGATAGG+GGG + chr1_4:55485221-55485240 Msa0170990:intron 55.0%
!! TTTGGTGGTCTCGGTGTTGG+TGG - chr1_4:55487292-55487311 None:intergenic 55.0%
!! TGGTTTGGTGGTCTCGGTGT+TGG - chr1_4:55487295-55487314 None:intergenic 55.0%
! TTTGGTGGCAGACTCCCTTC+GGG - chr1_4:55487383-55487402 None:intergenic 55.0%
GGCTCATGATGACAAGGGAG+TGG + chr1_4:55487868-55487887 Msa0170990:intron 55.0%
TATGTGGGCAGTCATGACCG+TGG + chr1_4:55488138-55488157 Msa0170990:CDS 55.0%
CAAAGGCTAGAAATCCGGCG+AGG - chr1_4:55488757-55488776 None:intergenic 55.0%
!! CTCGCCGGATTTCTAGCCTT+TGG + chr1_4:55488755-55488774 Msa0170990:CDS 55.0%
AAATTGAAGCGACCGTGGGC+AGG - chr1_4:55489715-55489734 None:intergenic 55.0%
CAAAGGCTAGAAGCCCGGCA+AGG - chr1_4:55481818-55481837 None:intergenic 60.0%
! CTTGCCGGGCTTCTAGCCTT+TGG + chr1_4:55481816-55481835 Msa0170990:CDS 60.0%
GCACGACTGTTCGCCCTGTT+TGG + chr1_4:55482540-55482559 Msa0170990:CDS 60.0%
ACTGTTCGCCCTGTTTGGGC+TGG + chr1_4:55482545-55482564 Msa0170990:CDS 60.0%
GCTAGATGGGAGCCTGCTCA+TGG + chr1_4:55483131-55483150 Msa0170990:intron 60.0%
CATGCTAGGCGCCTCGTAGT+TGG - chr1_4:55484240-55484259 None:intergenic 60.0%
! CAACTACGAGGCGCCTAGCA+TGG + chr1_4:55484238-55484257 Msa0170990:intron 60.0%
! CCTAGCATGGGCTGCTAGGT+GGG + chr1_4:55484251-55484270 Msa0170990:intron 60.0%
CAACCCAGTGAACCCGCGTA+CGG + chr1_4:55486816-55486835 Msa0170990:intron 60.0%
AACCCAGTGAACCCGCGTAC+GGG + chr1_4:55486817-55486836 Msa0170990:intron 60.0%
!!! TTGGTTTTGCGCCCGTACGC+GGG - chr1_4:55486831-55486850 None:intergenic 60.0%
!!! CTTGGTTTTGCGCCCGTACG+CGG - chr1_4:55486832-55486851 None:intergenic 60.0%
GGCGAATGGATCCGCCAACA+CGG + chr1_4:55486906-55486925 Msa0170990:intron 60.0%
! TTGGTGGCAGACTCCCTTCG+GGG - chr1_4:55487382-55487401 None:intergenic 60.0%
GACAGTTACACGGCCACCGA+CGG + chr1_4:55487435-55487454 Msa0170990:intron 60.0%
CCAGTCGTCGTGGTTTCCGT+CGG - chr1_4:55487454-55487473 None:intergenic 60.0%
ATGGTTCGTGCCAGTCGTCG+TGG - chr1_4:55487464-55487483 None:intergenic 60.0%
! GCCTAGCATGGGCTGCTAGG+TGG + chr1_4:55484250-55484269 Msa0170990:intron 65.0%
CCCACCTAGCAGCCCATGCT+AGG - chr1_4:55484254-55484273 None:intergenic 65.0%
! AGCATGGGCTGCTAGGTGGG+TGG + chr1_4:55484254-55484273 Msa0170990:intron 65.0%
! GGCTGCTAGGTGGGTGGACT+CGG + chr1_4:55484260-55484279 Msa0170990:intron 65.0%
! GCTGCTAGGTGGGTGGACTC+GGG + chr1_4:55484261-55484280 Msa0170990:intron 65.0%
! GGGATCGTCGACTGCGTCGT+CGG - chr1_4:55487334-55487353 None:intergenic 65.0%
GTCGTCGTGGTTTCCGTCGG+TGG - chr1_4:55487451-55487470 None:intergenic 65.0%
CCGACGGAAACCACGACGAC+TGG + chr1_4:55487451-55487470 Msa0170990:intron 65.0%
GCAAGATGGGAGCCTGCCCA+CGG + chr1_4:55489700-55489719 Msa0170990:CDS 65.0%
! GGCGCCTAGCATGGGCTGCT+AGG + chr1_4:55484247-55484266 Msa0170990:intron 70.0%
TCCTATCGCAGCAGGGCGCG+AGG + chr1_4:55484300-55484319 Msa0170990:intron 70.0%
TGCACACGCGCGCGCACACA+TGG + chr1_4:55486191-55486210 Msa0170990:intron 70.0%
GCACACGCGCGCGCACACAT+GGG + chr1_4:55486192-55486211 Msa0170990:intron 70.0%
CGCCCGTACGCGGGTTCACT+GGG - chr1_4:55486822-55486841 None:intergenic 70.0%
GCCTCGCGCCCTGCTGCGAT+AGG - chr1_4:55484304-55484323 None:intergenic 75.0%
GCGCCCGTACGCGGGTTCAC+TGG - chr1_4:55486823-55486842 None:intergenic 75.0%
!! GGTGGGTGGACTCGGGCGCG+AGG + chr1_4:55484268-55484287 Msa0170990:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 55481205 55490367 55481205 ID=Msa0170990;Name=Msa0170990
chr1_4 mRNA 55481205 55490367 55481205 ID=Msa0170990-mRNA-1;Parent=Msa0170990;Name=Msa0170990-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0.56|0.35|17|0|798
chr1_4 exon 55481205 55481346 55481205 ID=Msa0170990-mRNA-1:exon:16611;Parent=Msa0170990-mRNA-1
chr1_4 exon 55481389 55481505 55481389 ID=Msa0170990-mRNA-1:exon:16612;Parent=Msa0170990-mRNA-1
chr1_4 exon 55481772 55481912 55481772 ID=Msa0170990-mRNA-1:exon:16613;Parent=Msa0170990-mRNA-1
chr1_4 exon 55482354 55482566 55482354 ID=Msa0170990-mRNA-1:exon:16614;Parent=Msa0170990-mRNA-1
chr1_4 exon 55482882 55482985 55482882 ID=Msa0170990-mRNA-1:exon:16615;Parent=Msa0170990-mRNA-1
chr1_4 exon 55483182 55483265 55483182 ID=Msa0170990-mRNA-1:exon:16616;Parent=Msa0170990-mRNA-1
chr1_4 exon 55483428 55483512 55483428 ID=Msa0170990-mRNA-1:exon:16617;Parent=Msa0170990-mRNA-1
chr1_4 exon 55483639 55483883 55483639 ID=Msa0170990-mRNA-1:exon:16618;Parent=Msa0170990-mRNA-1
chr1_4 exon 55487884 55488021 55487884 ID=Msa0170990-mRNA-1:exon:16619;Parent=Msa0170990-mRNA-1
chr1_4 exon 55488064 55488184 55488064 ID=Msa0170990-mRNA-1:exon:16620;Parent=Msa0170990-mRNA-1
chr1_4 exon 55488711 55488851 55488711 ID=Msa0170990-mRNA-1:exon:16621;Parent=Msa0170990-mRNA-1
chr1_4 exon 55488980 55489141 55488980 ID=Msa0170990-mRNA-1:exon:16622;Parent=Msa0170990-mRNA-1
chr1_4 exon 55489163 55489252 55489163 ID=Msa0170990-mRNA-1:exon:16623;Parent=Msa0170990-mRNA-1
chr1_4 exon 55489483 55489589 55489483 ID=Msa0170990-mRNA-1:exon:16624;Parent=Msa0170990-mRNA-1
chr1_4 exon 55489691 55489834 55489691 ID=Msa0170990-mRNA-1:exon:16625;Parent=Msa0170990-mRNA-1
chr1_4 exon 55489996 55490119 55489996 ID=Msa0170990-mRNA-1:exon:16626;Parent=Msa0170990-mRNA-1
chr1_4 exon 55490132 55490367 55490132 ID=Msa0170990-mRNA-1:exon:16627;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55481205 55481346 55481205 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55481389 55481505 55481389 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55481772 55481912 55481772 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55482354 55482566 55482354 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55482882 55482985 55482882 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55483182 55483265 55483182 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55483428 55483512 55483428 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55483639 55483883 55483639 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55487884 55488021 55487884 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55488064 55488184 55488064 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55488711 55488851 55488711 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55488980 55489141 55488980 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55489163 55489252 55489163 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55489483 55489589 55489483 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55489691 55489834 55489691 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55489996 55490119 55489996 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
chr1_4 CDS 55490132 55490367 55490132 ID=Msa0170990-mRNA-1:cds;Parent=Msa0170990-mRNA-1
Gene Sequence

>Msa0170990

ATGACTAATGAAAAGGTAGAATGGAGAATCCAGGTAGAAGATGGTCCATGGAAGAGAGCTGGAATTTCTTGCGGCATGTGGGCATTTATTTCAAGTCTTTATTCCAAGTTGTGCAAATTTGTGAAAAAAGCTTGGGAGATTGGAATAGCACTTACGGCAGTGTCACTTTTCTACTACTTGAAACCTTTATATGATGGTGTTGGAAGAAATGCTATGTGGGCTGTCATGACCGTGATTGTAGTCTTTGAGTACACTGCCGGTGCTACAATATACAAAAGTGTAAACAGAATATGTGGAACTACCCTTGCCGGGCTTCTAGCCTTTGGTGTACATTGGGTTGCTAGTAAAGCAGGAGATCAATGGGAACCTGTAATTGTTGGAGCCTCACTTTTTCTACTAGCTTCAGCAACCACATTTTCAAGATTTATACCAACTATAAAGGCTCGTTTTGATTATGGTGCTATGATATTTATCCTCACTTTCAGTTTGGTTTCAATATCCGGTTATAGAATTGATGAATTGTTTGATTTGGCACGAACAAGAATTTCCACTATTATAATTGGAACTTCATTGTGCATAATCGTTAGCACGACTGTTCGCCCTGTTTGGGCTGGTTGTGCAGCTCAGTATTTTGAATCCCAAGCAGCAAGTGAGTCTAACAAAAATTTGATGGGTTACAAGTGTGCGCTAAATTCCAAAGCAACAGAAGAATCATTGCAATATCTTAAAATTGGTGCTACAATGCGTAGATGTGCTTCTTGCATTGATGCTCTTATTGGTTGCATAAATTCAGAAAACAAGACCTCAGATGACATCATGAAGATTATGAGCAGAACCTCTATGAAAGTAGGTGACAACTCTGCAAATGTCTTAAGAGAGTTAGCAAGTGGTGATGCAAAAATTGAAATCCCAATAATAGAATTAATTCAAGTGGTCACAGTTGTTTCATTGCTTACTGAAATTGTAGCTCGTGTGGAAGACATTGTGAAATGTGTTGAAGAATTATCAGATTTAGCTAAGTTCAAATCAGAAATGTCTAAATGTGACAAGACCAAACAACATTCAACAGACAACAAGATCTCACCAGAACAACAGAATGATGAGGATGCAAAAATCAAGACACTCCAGATGGGAGTGGTAAAAGTAGTAGAATGGAGTATCAAGGTAGAAGATGGTCCATGGAAGAGAGCTAAAATTTCTTGCAGCATGTGTGCATTTACCGTAGGTCTTTATTTCAAGTTGTGCAAATTTTTGAAGAAAGCTTGGGAGGTAGGAATAGCACTTACGGCTGTGTCACTGTTCTACTACTTGAATCCTTTGTATGATGGAGTTGGAAGAAATGCTATGTGGGCAGTCATGACCGTGGTAGTAGTCTTTGAGTACACTGCTGGTTCTACTATATACAAAAGTATAAATAGAATATGTGGAACTACCCTCGCCGGATTTCTAGCCTTTGGCGTACATTGGGTTGCTAGTAAAGCAGGAAAGCAATTGGAACCCATAATTGTTGGAGTCCTGCTCTTTCTACTAGCTTCTGCAGCGACATTCTCAAGATTCATCCCAACCATAAAGGCTCGTTTTGATTATGGTGTTCTGATATTTATCCTAACTTTCAGCTTGGTTTCAATATCTGGTTATCGAATTGATGAATTGTTTGATATGGCACGACAAAGGATTTCTACTATTATAATTGTTAGCATGATTATTCGACCTGTTTGGGCTGGTCTAGAACTCTATGTTTTAGTCACCGGAAACCTCGACAAACTTGCCAACTCTTTGGAAGGTTGTGTGGCTCAGTATTTTGAAGCTCAATCAGCAAGTGCGGAGTCTAACAAAAAATTGATGGATTACATGTGTGTGCTAAACTCCAAAGCAACAGAAGTATCAATGGCTAATTTAGCAAGATGGGAGCCTGCCCACGGTCGCTTCAATTTTCGTCACCCATGGAAGCAATACCTTAAAATTGGAGCCACAATGCGTAGATGTGCTTCCTGTATTGATGCTCTTGTTGGATGTATAAATTCAGAAAACAAGTCCTCAGATGAAATCAAGAAGATTATGAGCACAACATCAATGAAAGTGGGAGCCAACTCTGCAAGTGTCTTAAGAGAGTTATCAATTACAATCAATAATATGACAAAGTCAAATAAACTTGATAAGATGAATATTGCTACACAAGAGCTCCAAAATTTATTAAAATCATATTCAAACACACACAATGTTAATGCAAAAGAAACATCCCTTGGTGATGCAAAAATGGAAATCCCAATAATGGAATTAATTCAAGTGGTCACGGTAGTTTCTTTGCTTACTGAAACTGTAGCTCGTGTGGAAGACATTGTGAAAAGTGTTGAAGAATTATCAACATTAGCCAAGTTCAAAACAGAAATGTCC
Protein sequence

>Msa0170990

MTNEKVEWRIQVEDGPWKRAGISCGMWAFISSLYSKLCKFVKKAWEIGIALTAVSLFYYLKPLYDGVGRNAMWAVMTVIVVFEYTAGATIYKSVNRICGTTLAGLLAFGVHWVASKAGDQWEPVIVGASLFLLASATTFSRFIPTIKARFDYGAMIFILTFSLVSISGYRIDELFDLARTRISTIIIGTSLCIIVSTTVRPVWAGCAAQYFESQAASESNKNLMGYKCALNSKATEESLQYLKIGATMRRCASCIDALIGCINSENKTSDDIMKIMSRTSMKVGDNSANVLRELASGDAKIEIPIIELIQVVTVVSLLTEIVARVEDIVKCVEELSDLAKFKSEMSKCDKTKQHSTDNKISPEQQNDEDAKIKTLQMGVVKVVEWSIKVEDGPWKRAKISCSMCAFTVGLYFKLCKFLKKAWEVGIALTAVSLFYYLNPLYDGVGRNAMWAVMTVVVVFEYTAGSTIYKSINRICGTTLAGFLAFGVHWVASKAGKQLEPIIVGVLLFLLASAATFSRFIPTIKARFDYGVLIFILTFSLVSISGYRIDELFDMARQRISTIIIVSMIIRPVWAGLELYVLVTGNLDKLANSLEGCVAQYFEAQSASAESNKKLMDYMCVLNSKATEVSMANLARWEPAHGRFNFRHPWKQYLKIGATMRRCASCIDALVGCINSENKSSDEIKKIMSTTSMKVGANSASVLRELSITINNMTKSNKLDKMNIATQELQNLLKSYSNTHNVNAKETSLGDAKMEIPIMELIQVVTVVSLLTETVARVEDIVKSVEELSTLAKFKTEMS