Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032270 | KAF3778397.1 | 51.449 | 276 | 109 | 2 | 5 | 255 | 137 | 412 | 3.35e-87 | 280 |
| Msa0032270 | KAF3778397.1 | 51.807 | 415 | 170 | 4 | 6 | 393 | 2 | 413 | 2.17e-144 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032270 | sp|P29063|PR4B_TOBAC | 78.151 | 119 | 26 | 0 | 137 | 255 | 27 | 145 | 7.90e-63 | 201 |
| Msa0032270 | sp|P29063|PR4B_TOBAC | 71.318 | 129 | 37 | 0 | 8 | 136 | 9 | 137 | 4.05e-61 | 197 |
| Msa0032270 | sp|P29063|PR4B_TOBAC | 66.197 | 142 | 47 | 1 | 254 | 394 | 6 | 147 | 9.76e-59 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032270 | A0A5C7IBZ8 | 62.162 | 259 | 78 | 2 | 137 | 394 | 23 | 262 | 2.58e-110 | 333 |
| Msa0032270 | A0A5C7IBZ8 | 66.275 | 255 | 76 | 2 | 10 | 256 | 9 | 261 | 1.50e-119 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032270 | Msa0074080 | 0.818920 | 1.523433e-52 | -8.615850e-47 |
| Msa0032270 | Msa0074090 | 0.851079 | 1.120958e-60 | -8.615850e-47 |
| Msa0032270 | Msa0127300 | 0.843156 | 1.666069e-58 | -8.615850e-47 |
| Msa0032270 | Msa0172410 | 0.897853 | 9.391816e-77 | -8.615850e-47 |
| Msa0032270 | Msa1396830 | 0.838355 | 3.020364e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032270 | MtrunA17_Chr1g0190641 | 97.842 | 139 | 3 | 0 | 256 | 394 | 3 | 141 | 1.83e-97 | 286 |
| Msa0032270 | MtrunA17_Chr1g0190641 | 64.348 | 115 | 41 | 0 | 141 | 255 | 25 | 139 | 6.00e-51 | 167 |
| Msa0032270 | MtrunA17_Chr1g0190641 | 58.140 | 129 | 53 | 1 | 8 | 136 | 4 | 131 | 5.86e-48 | 159 |
| Msa0032270 | MtrunA17_Chr1g0190661 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 5.17e-89 | 265 |
| Msa0032270 | MtrunA17_Chr1g0190661 | 83.193 | 119 | 20 | 0 | 137 | 255 | 26 | 144 | 3.76e-68 | 212 |
| Msa0032270 | MtrunA17_Chr1g0190661 | 57.971 | 138 | 57 | 1 | 256 | 392 | 7 | 144 | 6.13e-55 | 178 |
| Msa0032270 | MtrunA17_Chr1g0190671 | 91.111 | 135 | 12 | 0 | 1 | 135 | 1 | 135 | 6.00e-86 | 257 |
| Msa0032270 | MtrunA17_Chr1g0190671 | 89.916 | 119 | 12 | 0 | 137 | 255 | 26 | 144 | 1.49e-72 | 223 |
| Msa0032270 | MtrunA17_Chr1g0190671 | 59.310 | 145 | 54 | 3 | 252 | 392 | 1 | 144 | 2.23e-53 | 174 |
| Msa0032270 | MtrunA17_Chr1g0190651 | 99.160 | 119 | 1 | 0 | 137 | 255 | 26 | 144 | 5.13e-81 | 245 |
| Msa0032270 | MtrunA17_Chr1g0190651 | 86.667 | 135 | 18 | 0 | 1 | 135 | 1 | 135 | 2.56e-80 | 243 |
| Msa0032270 | MtrunA17_Chr1g0190651 | 59.286 | 140 | 56 | 1 | 256 | 394 | 7 | 146 | 6.26e-55 | 178 |
| Msa0032270 | MtrunA17_Chr7g0274181 | 70.940 | 117 | 34 | 0 | 278 | 394 | 70 | 186 | 4.16e-58 | 188 |
| Msa0032270 | MtrunA17_Chr7g0274181 | 71.552 | 116 | 33 | 0 | 140 | 255 | 69 | 184 | 7.18e-55 | 180 |
| Msa0032270 | MtrunA17_Chr7g0274181 | 71.963 | 107 | 30 | 0 | 30 | 136 | 70 | 176 | 1.51e-51 | 171 |
| Msa0032270 | MtrunA17_Chr6g0484021 | 51.592 | 157 | 56 | 4 | 257 | 394 | 26 | 181 | 2.45e-42 | 156 |
| Msa0032270 | MtrunA17_Chr6g0484021 | 54.412 | 136 | 45 | 3 | 137 | 255 | 44 | 179 | 1.17e-39 | 149 |
| Msa0032270 | MtrunA17_Chr6g0484021 | 46.528 | 144 | 57 | 4 | 10 | 136 | 31 | 171 | 2.53e-32 | 128 |
| Msa0032270 | MtrunA17_Chr6g0483971 | 53.030 | 132 | 57 | 3 | 264 | 392 | 13 | 142 | 1.91e-39 | 142 |
| Msa0032270 | MtrunA17_Chr6g0483971 | 54.918 | 122 | 51 | 2 | 137 | 256 | 24 | 143 | 1.34e-38 | 140 |
| Msa0032270 | MtrunA17_Chr6g0483971 | 48.062 | 129 | 60 | 3 | 10 | 136 | 11 | 134 | 4.92e-33 | 125 |
| Msa0032270 | MtrunA17_Chr6g0484031 | 43.448 | 145 | 70 | 3 | 257 | 393 | 6 | 146 | 9.94e-32 | 125 |
| Msa0032270 | MtrunA17_Chr6g0484031 | 47.619 | 126 | 55 | 2 | 137 | 255 | 24 | 145 | 1.44e-31 | 125 |
| Msa0032270 | MtrunA17_Chr6g0484031 | 43.609 | 133 | 63 | 3 | 11 | 136 | 10 | 137 | 2.83e-26 | 110 |
| Msa0032270 | MtrunA17_Chr6g0484041 | 50.746 | 134 | 49 | 4 | 137 | 255 | 36 | 167 | 2.68e-31 | 125 |
| Msa0032270 | MtrunA17_Chr6g0484041 | 42.667 | 150 | 68 | 4 | 259 | 392 | 20 | 167 | 2.84e-29 | 119 |
| Msa0032270 | MtrunA17_Chr6g0484041 | 44.366 | 142 | 59 | 5 | 10 | 136 | 23 | 159 | 3.22e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032270 | AT3G04720.1 | 65.833 | 120 | 41 | 0 | 275 | 394 | 74 | 193 | 1.73e-55 | 182 |
| Msa0032270 | AT3G04720.1 | 71.429 | 119 | 34 | 0 | 137 | 255 | 73 | 191 | 1.21e-54 | 180 |
| Msa0032270 | AT3G04720.1 | 70.796 | 113 | 33 | 0 | 24 | 136 | 71 | 183 | 6.92e-53 | 175 |
Find 116 sgRNAs with CRISPR-Local
Find 805 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTCATGGCGTAGTAAATA+TGG | 0.294869 | 1_1:-59286853 | Msa0032270:CDS |
| TTGTCATGGCGTAGCAAATA+TGG | 0.308099 | 1_1:-59292832 | Msa0032270:CDS |
| ACAACCCTGAGCAGCATAAC+TGG | 0.309552 | 1_1:-59286927 | Msa0032270:CDS |
| ATTGTTCTGTGTTCTTGTTT+TGG | 0.345122 | 1_1:-59286992 | Msa0032270:CDS |
| ACAGAGAACTTTGAGCTTGT+TGG | 0.365729 | 1_1:-59299569 | Msa0032270:CDS |
| CAAGGACTGGTTTGCATCCC+AGG | 0.368235 | 1_1:+59299417 | None:intergenic |
| TCTCTGCCTGTTGGCCCGGC+TGG | 0.368492 | 1_1:+59292790 | None:intergenic |
| TTCTTGTGGCCGTTGCTTGA+GGG | 0.373798 | 1_1:-59286788 | Msa0032270:intron |
| TTCTATCTGAGTCGAGCCTT+TGG | 0.375815 | 1_1:+59286214 | None:intergenic |
| TAGGTGACAAACACTAAAAC+TGG | 0.376685 | 1_1:-59286306 | Msa0032270:CDS |
| CAAGGGCTGGTTTGCATCCC+AGG | 0.379158 | 1_1:+59292852 | None:intergenic |
| ACAACCCTCAGAATATTAAC+TGG | 0.383186 | 1_1:-59292906 | Msa0032270:CDS |
| TGTGGACCAGCCGGGCCAAC+AGG | 0.387791 | 1_1:-59292796 | Msa0032270:CDS |
| TAACTATAAGGTGACCCTTC+TGG | 0.391434 | 1_1:+59298712 | None:intergenic |
| CTCTCTACCACGAGGGCCCT+GGG | 0.401142 | 1_1:+59299354 | None:intergenic |
| CCAGTGTTTACTGTGCTACC+TGG | 0.408177 | 1_1:-59292870 | Msa0032270:CDS |
| AAGTCCCAGTTATGCTGCTC+AGG | 0.412502 | 1_1:+59286922 | None:intergenic |
| CAGGTGACAAATACTGCAAC+TGG | 0.420771 | 1_1:-59290362 | Msa0032270:CDS |
| CAGGTGACAAATACTGCAAC+TGG | 0.420771 | 1_1:-59298834 | Msa0032270:CDS |
| CTTCTTGTGGCCGTTGCTTG+AGG | 0.421339 | 1_1:-59286789 | Msa0032270:CDS |
| ACAACCCTCAGAATATCAAT+TGG | 0.424622 | 1_1:-59299471 | Msa0032270:CDS |
| GTCAGAGTGCAAACAACGTT+AGG | 0.437077 | 1_1:-59292945 | Msa0032270:intron |
| TTATTGATCAATGCCACAAT+GGG | 0.441698 | 1_1:-59286263 | Msa0032270:CDS |
| ACTCTCTACCACGAGGGCCC+TGG | 0.449243 | 1_1:+59299353 | None:intergenic |
| TGTGGACCTGTTGGTCCTCA+AGG | 0.453184 | 1_1:-59286817 | Msa0032270:CDS |
| CTGGGATGCAAACCAGTCCT+TGG | 0.456847 | 1_1:-59299416 | Msa0032270:CDS |
| CGCCAACGGTGGATTAGACT+TGG | 0.460359 | 1_1:-59298778 | Msa0032270:CDS |
| AGATAGAAGTGGGAATGCTC+AGG | 0.461924 | 1_1:-59286199 | Msa0032270:CDS |
| CAACCCTCAGAATATCAATT+GGG | 0.462594 | 1_1:-59299470 | Msa0032270:CDS |
| GCTTGGCCTTGAGGACCAAC+AGG | 0.464525 | 1_1:+59286811 | None:intergenic |
| AGGGCCCTGGGGTCCACAAA+AGG | 0.466880 | 1_1:+59299366 | None:intergenic |
| CTAATCCACCGTTGGCGCAC+TGG | 0.476055 | 1_1:+59298784 | None:intergenic |
| GTCAGAGTGCAAACGGTGTA+AGG | 0.476091 | 1_1:-59299510 | Msa0032270:CDS |
| CCAGTGTATACTGTGCTACC+TGG | 0.477513 | 1_1:-59299435 | Msa0032270:CDS |
| TCAAATTGATACCAATGGAC+AGG | 0.479120 | 1_1:-59298739 | Msa0032270:CDS |
| CAAAGCTATAGTTAACTGTA+AGG | 0.486461 | 1_1:+59290228 | None:intergenic |
| AAATACTGCAACTGGAGCTC+AGG | 0.488941 | 1_1:-59290354 | Msa0032270:CDS |
| ATCTAAGTCCAGTCCACCAT+TGG | 0.492671 | 1_1:+59290304 | None:intergenic |
| TGATATTCTGAGGGTTGTAA+AGG | 0.493786 | 1_1:+59299476 | None:intergenic |
| TCAAATTGATACCAATGGAC+AGG | 0.496103 | 1_1:-59290267 | Msa0032270:CDS |
| GTCTTGTGGCAAGTGCTTGA+GGG | 0.497781 | 1_1:-59299332 | Msa0032270:intron |
| TGCTACGCCATGACAAGGGC+TGG | 0.498360 | 1_1:+59292839 | None:intergenic |
| AACTATAGCTTTGTTAATTG+CGG | 0.499041 | 1_1:-59290218 | Msa0032270:intron |
| AGAATCTCTGCCTGTTGGCC+CGG | 0.502065 | 1_1:+59292786 | None:intergenic |
| CCAGTGCTCCAATGGTGGAC+TGG | 0.503700 | 1_1:-59290312 | Msa0032270:CDS |
| CCAGTCCACCATTGGAGCAC+TGG | 0.503905 | 1_1:+59290312 | None:intergenic |
| AGCAACGGCCACAAGAAGCT+TGG | 0.504478 | 1_1:+59286794 | None:intergenic |
| TAATCCCAATTGATATTCTG+AGG | 0.515116 | 1_1:+59299466 | None:intergenic |
| AGTCTTGTGGCAAGTGCTTG+AGG | 0.518693 | 1_1:-59299333 | Msa0032270:CDS |
| CCGCAAGAATCTCTGCCTGT+TGG | 0.525418 | 1_1:+59292781 | None:intergenic |
| TGGACGTTGGTGTGTTCCAA+AGG | 0.527318 | 1_1:-59286230 | Msa0032270:CDS |
| TGGCCCGGCTGGTCCACAAA+AGG | 0.528182 | 1_1:+59292801 | None:intergenic |
| TAGTCCCAGTTAATATTCTG+AGG | 0.529315 | 1_1:+59292901 | None:intergenic |
| ACTGCCTTCTGTGGACCTGT+TGG | 0.532729 | 1_1:-59286826 | Msa0032270:CDS |
| ATTCTGAACGCCCTGTCCAT+TGG | 0.534339 | 1_1:+59290256 | None:intergenic |
| TACTACGCCATGACAAAGGC+TGG | 0.538509 | 1_1:+59286860 | None:intergenic |
| TTCAATCAAATTGATACCAA+TGG | 0.541175 | 1_1:-59290272 | Msa0032270:CDS |
| TTCAATCAAATTGATACCAA+TGG | 0.541175 | 1_1:-59298744 | Msa0032270:CDS |
| CTTCTGGTAACCCTGTCCAT+TGG | 0.545362 | 1_1:+59298728 | None:intergenic |
| CCTCAAGGCCAAGCTTCTTG+TGG | 0.552466 | 1_1:-59286802 | Msa0032270:CDS |
| GTGAATGGTCAGAGTGCAAA+CGG | 0.554003 | 1_1:-59299517 | Msa0032270:CDS |
| TCAGGTAACGGTGAGAATAG+TGG | 0.560842 | 1_1:-59290336 | Msa0032270:CDS |
| CAGTGTTTACTGTGCTACCT+GGG | 0.562961 | 1_1:-59292869 | Msa0032270:CDS |
| AATGGACAGGGCGTTCAGAA+TGG | 0.563067 | 1_1:-59290254 | Msa0032270:CDS |
| AATGGACAGGGTTACCAGAA+GGG | 0.563174 | 1_1:-59298726 | Msa0032270:CDS |
| ATGCAGACCAGCCTTTGTCA+TGG | 0.566521 | 1_1:-59286867 | Msa0032270:CDS |
| AGAACAATGACAACATGCAT+AGG | 0.568790 | 1_1:+59287007 | None:intergenic |
| ATAGTGGACCAGTGCTCCAA+TGG | 0.570594 | 1_1:-59290320 | Msa0032270:CDS |
| CAACCCTGAGCAGCATAACT+GGG | 0.571462 | 1_1:-59286926 | Msa0032270:CDS |
| CCACAAGAAGCTTGGCCTTG+AGG | 0.575012 | 1_1:+59286802 | None:intergenic |
| TATTCTGAGGGTTGTAAAGG+TGG | 0.575623 | 1_1:+59299479 | None:intergenic |
| TCAGAGTGCAAACAACGTTA+GGG | 0.580216 | 1_1:-59292944 | Msa0032270:intron |
| GAACAATGACAACATGCATA+GGG | 0.581805 | 1_1:+59287008 | None:intergenic |
| GGCTCGACTCAGATAGAAGT+GGG | 0.582732 | 1_1:-59286209 | Msa0032270:CDS |
| ATGCAAACCAGCCCTTGTCA+TGG | 0.583448 | 1_1:-59292846 | Msa0032270:CDS |
| ATATTTGCTACGCCATGACA+AGG | 0.584472 | 1_1:+59292834 | None:intergenic |
| CAACCCTCAGAATATTAACT+GGG | 0.585355 | 1_1:-59292905 | Msa0032270:CDS |
| TATGGTTGGACTGCCTTCTG+TGG | 0.588559 | 1_1:-59286835 | Msa0032270:CDS |
| ATTATTGATCAATGCCACAA+TGG | 0.589070 | 1_1:-59286264 | Msa0032270:CDS |
| CATGGCGTAGTAAATATGGT+TGG | 0.590993 | 1_1:-59286849 | Msa0032270:CDS |
| CAAATTGATACCAATGGACA+GGG | 0.591064 | 1_1:-59298738 | Msa0032270:CDS |
| ATCCAAGTCTAATCCACCGT+TGG | 0.591674 | 1_1:+59298776 | None:intergenic |
| AGTCCCAGTTAATATTCTGA+GGG | 0.592868 | 1_1:+59292902 | None:intergenic |
| ATAGTGGACCAGTGCGCCAA+CGG | 0.593426 | 1_1:-59298792 | Msa0032270:CDS |
| AATCCCAATTGATATTCTGA+GGG | 0.597982 | 1_1:+59299467 | None:intergenic |
| TCAAGTAACAGTGAGAATAG+TGG | 0.598835 | 1_1:-59298808 | Msa0032270:CDS |
| CAGTGTATACTGTGCTACCT+GGG | 0.602353 | 1_1:-59299434 | Msa0032270:CDS |
| TGCAACTGGAGCTCAGGTAA+CGG | 0.602926 | 1_1:-59290348 | Msa0032270:CDS |
| CATGGCGTAGCAAATATGGT+TGG | 0.604474 | 1_1:-59292828 | Msa0032270:CDS |
| CAAATTGATACCAATGGACA+GGG | 0.605839 | 1_1:-59290266 | Msa0032270:CDS |
| AGGGTTGTATAAATTAAATG+TGG | 0.608521 | 1_1:+59286942 | None:intergenic |
| TGTGTTTCATAGTAGAAGCA+TGG | 0.611414 | 1_1:+59299616 | None:intergenic |
| ATGCAAACCAGTCCTTGGAA+TGG | 0.612020 | 1_1:-59299411 | Msa0032270:CDS |
| GTGGACCAGTGCGCCAACGG+TGG | 0.612937 | 1_1:-59298789 | Msa0032270:CDS |
| CAATGGACAGGGTTACCAGA+AGG | 0.617429 | 1_1:-59298727 | Msa0032270:CDS |
| AGTCCCAGTTATGCTGCTCA+GGG | 0.620717 | 1_1:+59286923 | None:intergenic |
| GTGGACCAGTGCTCCAATGG+TGG | 0.625188 | 1_1:-59290317 | Msa0032270:CDS |
| TATTTACTACGCCATGACAA+AGG | 0.628370 | 1_1:+59286856 | None:intergenic |
| GATAGAAGTGGGAATGCTCA+GGG | 0.629789 | 1_1:-59286198 | Msa0032270:CDS |
| TGTGGACCCCAGGGCCCTCG+TGG | 0.633299 | 1_1:-59299361 | Msa0032270:CDS |
| CCAAGCATACCCTCAAGCAA+CGG | 0.639130 | 1_1:+59286779 | None:intergenic |
| ATTGATCAATGCCACAATGG+GGG | 0.639653 | 1_1:-59286261 | Msa0032270:CDS |
| AGGCTCGACTCAGATAGAAG+TGG | 0.640187 | 1_1:-59286210 | Msa0032270:CDS |
| AGGACCAACAGGTCCACAGA+AGG | 0.642921 | 1_1:+59286822 | None:intergenic |
| GTGGGAACGATGTTAGTGAA+TGG | 0.656794 | 1_1:-59299532 | Msa0032270:CDS |
| TCTCTACCACGAGGGCCCTG+GGG | 0.658114 | 1_1:+59299355 | None:intergenic |
| TATTTGCTACGCCATGACAA+GGG | 0.664421 | 1_1:+59292835 | None:intergenic |
| CCAGGTAGCACAGTAAACAC+TGG | 0.666216 | 1_1:+59292870 | None:intergenic |
| CCAACAGGCAGAGATTCTTG+CGG | 0.667081 | 1_1:-59292781 | Msa0032270:CDS |
| TCACTAACATCGTTCCCACA+AGG | 0.670804 | 1_1:+59299536 | None:intergenic |
| CCAGGTAGCACAGTATACAC+TGG | 0.672657 | 1_1:+59299435 | None:intergenic |
| TATTGATCAATGCCACAATG+GGG | 0.681120 | 1_1:-59286262 | Msa0032270:CDS |
| CCTCGTGGTAGAGAGTCTTG+TGG | 0.684944 | 1_1:-59299346 | Msa0032270:CDS |
| CACAAGACTCTCTACCACGA+GGG | 0.694332 | 1_1:+59299347 | None:intergenic |
| CCACAAGACTCTCTACCACG+AGG | 0.710327 | 1_1:+59299346 | None:intergenic |
| ATTAAATGTGGACTGCACAG+TGG | 0.717942 | 1_1:+59286954 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTAAAATATATATAT+TGG | - | chr1_1:59299105-59299124 | Msa0032270:intron | 0.0% |
| !! | TTTATAACACATTTATAATT+AGG | - | chr1_1:59286737-59286756 | Msa0032270:intron | 10.0% |
| !!! | GTTTTATTTATTGTATTATT+AGG | + | chr1_1:59287181-59287200 | None:intergenic | 10.0% |
| !!! | TTAGTAACTTATTTTATTTT+AGG | + | chr1_1:59288191-59288210 | None:intergenic | 10.0% |
| !! | ATATAAATAGAATATATTAG+AGG | - | chr1_1:59288645-59288664 | Msa0032270:intron | 10.0% |
| !!! | TTTGTCTTTATTTTATTTTA+TGG | - | chr1_1:59289181-59289200 | Msa0032270:intron | 10.0% |
| !!! | TATTTTATTTTATGGTAATT+AGG | - | chr1_1:59289189-59289208 | Msa0032270:intron | 10.0% |
| !!! | ATTTTATTTTATGGTAATTA+GGG | - | chr1_1:59289190-59289209 | Msa0032270:intron | 10.0% |
| !! | TAAAATAAAATAAAGACTTA+TGG | + | chr1_1:59289234-59289253 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTGGATTAAATA+TGG | - | chr1_1:59289898-59289917 | Msa0032270:intron | 10.0% |
| !!! | AAAATATGATTTTATTTTGT+AGG | - | chr1_1:59290106-59290125 | Msa0032270:intron | 10.0% |
| !!! | AAATATGATTTTATTTTGTA+GGG | - | chr1_1:59290107-59290126 | Msa0032270:intron | 10.0% |
| !!! | ATATATATTATATTTTAGAC+CGG | + | chr1_1:59290240-59290259 | None:intergenic | 10.0% |
| !! | ACATCTAATAAAAATATAAA+CGG | - | chr1_1:59290762-59290781 | Msa0032270:intron | 10.0% |
| !! | TTCTTTCAAAAAAAATATTA+AGG | + | chr1_1:59293234-59293253 | None:intergenic | 10.0% |
| !!! | TTTTGAAAGAAAAAAAAATA+AGG | - | chr1_1:59293243-59293262 | Msa0032270:intron | 10.0% |
| !!! | TAAAAATTAAGTTATTTTCT+TGG | - | chr1_1:59293302-59293321 | Msa0032270:intron | 10.0% |
| !! | AATTATATTTGTATAGTTTA+TGG | - | chr1_1:59293665-59293684 | Msa0032270:intron | 10.0% |
| !! | AAACTATCATTTATATTTAA+AGG | + | chr1_1:59294541-59294560 | None:intergenic | 10.0% |
| !!! | TAAAATAATTATTTAGAATC+CGG | - | chr1_1:59294860-59294879 | Msa0032270:intron | 10.0% |
| !! | TTTAATTAGTAATAATATTG+TGG | - | chr1_1:59295398-59295417 | Msa0032270:intron | 10.0% |
| !!! | AAATAAATTAATTTGAAGTT+AGG | - | chr1_1:59295979-59295998 | Msa0032270:intron | 10.0% |
| !! | ATAATTACATTATATATTTG+TGG | + | chr1_1:59296348-59296367 | None:intergenic | 10.0% |
| !!! | CATTTTGAATATAAAAATTT+AGG | - | chr1_1:59297122-59297141 | Msa0032270:intron | 10.0% |
| !!! | AATGATAAAATATTTGATTT+GGG | + | chr1_1:59297716-59297735 | None:intergenic | 10.0% |
| !!! | AATTTAATAATTTTTTAACG+AGG | - | chr1_1:59298377-59298396 | Msa0032270:intron | 10.0% |
| !!! | TTTAAAATATATATATTGGA+TGG | - | chr1_1:59299109-59299128 | Msa0032270:intron | 10.0% |
| !!! | TTTTATAAAATGAGTAAGTA+CGG | + | chr1_1:59286497-59286516 | None:intergenic | 15.0% |
| !! | AAATAACTAATTAAACACTA+AGG | - | chr1_1:59287447-59287466 | Msa0032270:intron | 15.0% |
| !! | CTTCAAAAAAAAAACTAATT+AGG | - | chr1_1:59287494-59287513 | Msa0032270:intron | 15.0% |
| !! | ATTATATCTACATATCTAAT+CGG | + | chr1_1:59287582-59287601 | None:intergenic | 15.0% |
| !! | ATGATGATTTATAATCAATT+AGG | - | chr1_1:59287607-59287626 | Msa0032270:intron | 15.0% |
| !!! | TTTATTAATGGATTTCTTTT+TGG | - | chr1_1:59287861-59287880 | Msa0032270:intron | 15.0% |
| !! | AATATATAAATATTGGAAGT+GGG | + | chr1_1:59287953-59287972 | None:intergenic | 15.0% |
| !! | TAATATATAAATATTGGAAG+TGG | + | chr1_1:59287954-59287973 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTTGAATTCAATT+TGG | - | chr1_1:59288083-59288102 | Msa0032270:intron | 15.0% |
| !!! | CCAATTTTTTCTTATATTTT+GGG | + | chr1_1:59288489-59288508 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCAAGTAATCTAA+TGG | - | chr1_1:59288998-59289017 | Msa0032270:intron | 15.0% |
| !! | GAGAATTTAAAAAATTATAG+TGG | + | chr1_1:59289478-59289497 | None:intergenic | 15.0% |
| !! | AATAAACCTTCAATTTAAAT+TGG | - | chr1_1:59289526-59289545 | Msa0032270:intron | 15.0% |
| !!! | CATAGTTTTTTTTTTTTTGA+AGG | - | chr1_1:59289800-59289819 | Msa0032270:intron | 15.0% |
| !!! | AAAGTAAGCATATAATTTTT+TGG | - | chr1_1:59289887-59289906 | Msa0032270:intron | 15.0% |
| !!! | CATTTTTTTTAACAGTTTTA+GGG | + | chr1_1:59290073-59290092 | None:intergenic | 15.0% |
| !!! | ACATTTTTTTTAACAGTTTT+AGG | + | chr1_1:59290074-59290093 | None:intergenic | 15.0% |
| !! | ATATAACTTTATGATTTGAT+TGG | - | chr1_1:59290459-59290478 | Msa0032270:intron | 15.0% |
| !! | CATCTATTAAAAATTGTTAA+TGG | - | chr1_1:59290487-59290506 | Msa0032270:intron | 15.0% |
| !!! | TGGACATAATTTTATTATTT+CGG | - | chr1_1:59290538-59290557 | Msa0032270:intron | 15.0% |
| !!! | AATAGATTAATGAATTGTTT+TGG | - | chr1_1:59290576-59290595 | Msa0032270:intron | 15.0% |
| !!! | ATATTTTTATTAGATGTTGA+TGG | + | chr1_1:59290759-59290778 | None:intergenic | 15.0% |
| !! | TTTCATAGAAATTATTGTTA+AGG | + | chr1_1:59292224-59292243 | None:intergenic | 15.0% |
| !!! | ATGTAGAAAATATTTAAGTT+GGG | + | chr1_1:59292433-59292452 | None:intergenic | 15.0% |
| !! | AATGTAGAAAATATTTAAGT+TGG | + | chr1_1:59292434-59292453 | None:intergenic | 15.0% |
| !!! | ATCTTTTTAGTAATATTTCT+AGG | + | chr1_1:59292476-59292495 | None:intergenic | 15.0% |
| !! | ATATTAGTTGATCATTTATA+AGG | - | chr1_1:59293194-59293213 | Msa0032270:intron | 15.0% |
| !! | TCAAAAAAAATATTAAGGAT+AGG | + | chr1_1:59293229-59293248 | None:intergenic | 15.0% |
| !! | CATTATATTTATAATGGTTT+AGG | + | chr1_1:59293488-59293507 | None:intergenic | 15.0% |
| !! | ACTACTCATTATATTTATAA+TGG | + | chr1_1:59293494-59293513 | None:intergenic | 15.0% |
| !!! | ATGTGACATATTATTTTTTT+AGG | - | chr1_1:59293990-59294009 | Msa0032270:intron | 15.0% |
| !! | TTAAATATATATAGTTCAGA+TGG | - | chr1_1:59294165-59294184 | Msa0032270:intron | 15.0% |
| !! | AATTATCAAACAAAATAACA+TGG | - | chr1_1:59294573-59294592 | Msa0032270:intron | 15.0% |
| !! | TATAAAAAATTATCAAACTG+TGG | + | chr1_1:59294842-59294861 | None:intergenic | 15.0% |
| !!! | AAATTTCTACTTTTAGTTTT+AGG | - | chr1_1:59295255-59295274 | Msa0032270:intron | 15.0% |
| !!! | AGTTTTATTTATGGTATTTA+AGG | + | chr1_1:59295684-59295703 | None:intergenic | 15.0% |
| !!! | ATTTTTAGATTGAGTAAAAA+AGG | + | chr1_1:59296478-59296497 | None:intergenic | 15.0% |
| !!! | TTTTCAATATATATTTGACT+TGG | + | chr1_1:59297017-59297036 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTTTTTTTGCCT+TGG | - | chr1_1:59297323-59297342 | Msa0032270:intron | 15.0% |
| !!! | TTTTTAATTTTTTTTGCCTT+GGG | - | chr1_1:59297324-59297343 | Msa0032270:intron | 15.0% |
| !!! | ACGATGTTATATTAAATTTT+TGG | + | chr1_1:59297463-59297482 | None:intergenic | 15.0% |
| !! | AAATTTAATATAACATCGTA+AGG | - | chr1_1:59297464-59297483 | Msa0032270:intron | 15.0% |
| !!! | TCTTAAATCTTTTCTATATT+CGG | + | chr1_1:59297573-59297592 | None:intergenic | 15.0% |
| !! | GAATGATAAAATATTTGATT+TGG | + | chr1_1:59297717-59297736 | None:intergenic | 15.0% |
| !!! | ATCTTACTTAAGTTTTTAAA+TGG | - | chr1_1:59297964-59297983 | Msa0032270:intron | 15.0% |
| !! | TCAAAATTGTTTAAAGATAA+AGG | - | chr1_1:59298025-59298044 | Msa0032270:intron | 15.0% |
| !!! | ATTTTTAAAATGTAAACCAA+CGG | + | chr1_1:59298356-59298375 | None:intergenic | 15.0% |
| !!! | ATAACTTATATACTTTTAGA+TGG | + | chr1_1:59299085-59299104 | None:intergenic | 15.0% |
| !! | ACCTAAACACATTTATAATT+AGG | - | chr1_1:59286660-59286679 | Msa0032270:intron | 20.0% |
| !! | ACCTAATTATAAATGTGTTT+AGG | + | chr1_1:59286664-59286683 | None:intergenic | 20.0% |
| !! | GATAGTTGAATTAATATTAG+TGG | - | chr1_1:59286933-59286952 | Msa0032270:CDS | 20.0% |
| !! | TCTAATCGAATTATATAAAG+AGG | + | chr1_1:59287409-59287428 | None:intergenic | 20.0% |
| !! | AATTAGGCATGTAATATAAT+CGG | - | chr1_1:59287623-59287642 | Msa0032270:intron | 20.0% |
| !! | ATCCATTAATAAAGTGAATT+GGG | + | chr1_1:59287854-59287873 | None:intergenic | 20.0% |
| !! | AATCCATTAATAAAGTGAAT+TGG | + | chr1_1:59287855-59287874 | None:intergenic | 20.0% |
| !!! | AAGTTTTTATGATTTCTCAT+AGG | - | chr1_1:59288033-59288052 | Msa0032270:intron | 20.0% |
| !!! | GATAATTATTGTTGATGATA+TGG | - | chr1_1:59288385-59288404 | Msa0032270:intron | 20.0% |
| !! | CCCAAAATATAAGAAAAAAT+TGG | - | chr1_1:59288486-59288505 | Msa0032270:intron | 20.0% |
| !!! | GCCAATTTTTTCTTATATTT+TGG | + | chr1_1:59288490-59288509 | None:intergenic | 20.0% |
| !! | CTCAAAATATAAGCAAAAAT+TGG | + | chr1_1:59288571-59288590 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTTGAGA+CGG | - | chr1_1:59288572-59288591 | Msa0032270:intron | 20.0% |
| !! | ATAGAATATATTAGAGGTTA+TGG | - | chr1_1:59288651-59288670 | Msa0032270:intron | 20.0% |
| !! | CTTGATAAAATCTAAATAGA+AGG | - | chr1_1:59288674-59288693 | Msa0032270:intron | 20.0% |
| !!! | CTATTCTAAAAGTTATTATG+TGG | - | chr1_1:59289140-59289159 | Msa0032270:intron | 20.0% |
| !!! | AAAGATGAAAGCTTAATTTT+AGG | - | chr1_1:59289274-59289293 | Msa0032270:intron | 20.0% |
| !!! | AAGATGAAAGCTTAATTTTA+GGG | - | chr1_1:59289275-59289294 | Msa0032270:intron | 20.0% |
| !! | ATAAAACACTCTTACAAATA+AGG | + | chr1_1:59289337-59289356 | None:intergenic | 20.0% |
| !! | TTATTATGAAGACATTTGAA+AGG | - | chr1_1:59289415-59289434 | Msa0032270:intron | 20.0% |
| !! | TATAGAGATTTAATTATAGC+AGG | - | chr1_1:59289502-59289521 | Msa0032270:intron | 20.0% |
| !!! | AACTATCAATTTGTTAATTG+AGG | - | chr1_1:59289637-59289656 | Msa0032270:intron | 20.0% |
| !! | ATAGATGTCATCTTATAATA+GGG | - | chr1_1:59289731-59289750 | Msa0032270:intron | 20.0% |
| !!! | TATTGATGGTTAATTTTACA+AGG | + | chr1_1:59290011-59290030 | None:intergenic | 20.0% |
| !!! | ATATTTTTCGTCAGTAATTT+TGG | - | chr1_1:59290046-59290065 | Msa0032270:intron | 20.0% |
| !! | ACTGTTAAAAAAAATGTTAC+AGG | - | chr1_1:59290077-59290096 | Msa0032270:intron | 20.0% |
| !!! | AAAATTGTTAATGGATTCAT+TGG | - | chr1_1:59290496-59290515 | Msa0032270:intron | 20.0% |
| !! | TGCAATAAAACAATAAAACA+GGG | + | chr1_1:59290653-59290672 | None:intergenic | 20.0% |
| !!! | TTTTAAGTGATTAAACTTTG+CGG | - | chr1_1:59292117-59292136 | Msa0032270:intron | 20.0% |
| !!! | ATTAAACAAAAATGAGTTGA+AGG | + | chr1_1:59292393-59292412 | None:intergenic | 20.0% |
| !! | AACACAAAAAATTGAGAAAA+TGG | - | chr1_1:59292764-59292783 | Msa0032270:intron | 20.0% |
| !!! | ATTCTTTGTTAGTTTATTGA+AGG | + | chr1_1:59293130-59293149 | None:intergenic | 20.0% |
| !!! | AAAAAATAATTTGAGATGAG+TGG | + | chr1_1:59293280-59293299 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTATATGATTTAG+CGG | - | chr1_1:59293577-59293596 | Msa0032270:intron | 20.0% |
| !!! | TATAGCAATGTTTTAAAATC+CGG | - | chr1_1:59293712-59293731 | Msa0032270:intron | 20.0% |
| !!! | TGACTTTTTTTATTAAGACT+GGG | + | chr1_1:59293823-59293842 | None:intergenic | 20.0% |
| !!! | ATGACTTTTTTTATTAAGAC+TGG | + | chr1_1:59293824-59293843 | None:intergenic | 20.0% |
| !! | AAAAAAAATTATTCAATGCG+AGG | + | chr1_1:59294413-59294432 | None:intergenic | 20.0% |
| !!! | AACAGAGATTCTTTTATTTT+GGG | - | chr1_1:59295107-59295126 | Msa0032270:intron | 20.0% |
| !!! | TGTAATTATCCATTTTTTCT+AGG | - | chr1_1:59296359-59296378 | Msa0032270:intron | 20.0% |
| !!! | AATAATTTCGCATTTTCATT+TGG | - | chr1_1:59296410-59296429 | Msa0032270:intron | 20.0% |
| !! | AAAAAAAAGATTGAGTAGAA+AGG | + | chr1_1:59296446-59296465 | None:intergenic | 20.0% |
| !!! | TTTCTACTCAATCTTTTTTT+TGG | - | chr1_1:59296445-59296464 | Msa0032270:intron | 20.0% |
| !!! | ATTTCTAGTCTAAACTTTTT+AGG | - | chr1_1:59296631-59296650 | Msa0032270:intron | 20.0% |
| !!! | TTTTAATTTTTTTTGCCTTG+GGG | - | chr1_1:59297325-59297344 | Msa0032270:intron | 20.0% |
| !! | ATCTAATAATATTGAGAGTA+AGG | - | chr1_1:59297526-59297545 | Msa0032270:intron | 20.0% |
| !!! | ACAAAAAGAAATGTTTTGTA+AGG | - | chr1_1:59297996-59298015 | Msa0032270:intron | 20.0% |
| !! | AAAAAAAAAAAAGACAAGAG+AGG | + | chr1_1:59298122-59298141 | None:intergenic | 20.0% |
| !! | AAAATAAAGTTTACACGAAT+TGG | - | chr1_1:59299143-59299162 | Msa0032270:intron | 20.0% |
| !! | TTGAATTCTTACCATATTAT+TGG | - | chr1_1:59299290-59299309 | Msa0032270:intron | 20.0% |
| !!! | GAGTTTTATTTGCTTATTTT+CGG | + | chr1_1:59299350-59299369 | None:intergenic | 20.0% |
| ! | AACACACAAAAAAGAGAAAA+TGG | - | chr1_1:59286199-59286218 | Msa0032270:CDS | 25.0% |
| !! | ATTAGGTCATAAATCGTTTT+CGG | - | chr1_1:59286677-59286696 | Msa0032270:intron | 25.0% |
| !!! | ATCTCTATGAGATTTTTTGT+CGG | - | chr1_1:59286849-59286868 | Msa0032270:CDS | 25.0% |
| ! | TTCAATCAAATTGATACCAA+TGG | - | chr1_1:59287054-59287073 | Msa0032270:intron | 25.0% |
| ! | CAAAGACATAGTTAACTATA+AGG | + | chr1_1:59287101-59287120 | None:intergenic | 25.0% |
| !!! | TACTATATAACTTGCTATTG+TGG | - | chr1_1:59287258-59287277 | Msa0032270:intron | 25.0% |
| ! | AGAAGTAAATTCGATGTTAT+AGG | - | chr1_1:59287301-59287320 | Msa0032270:intron | 25.0% |
| !! | CTTAATTTTAAGCGTTTTGT+CGG | - | chr1_1:59287353-59287372 | Msa0032270:intron | 25.0% |
| ! | AACACTAAGGTTAACTAATT+AGG | - | chr1_1:59287460-59287479 | Msa0032270:intron | 25.0% |
| ! | AAGTGTTAGATTGTTCTATT+AGG | - | chr1_1:59287543-59287562 | Msa0032270:intron | 25.0% |
| !!! | AGTAATTAATGAGTTTTGAG+AGG | - | chr1_1:59287679-59287698 | Msa0032270:intron | 25.0% |
| !!! | GTAATTAATGAGTTTTGAGA+GGG | - | chr1_1:59287680-59287699 | Msa0032270:intron | 25.0% |
| !!! | GCGCTCTTTATTTTATTTTT+TGG | + | chr1_1:59287775-59287794 | None:intergenic | 25.0% |
| !! | AAACATTTTTACCAAAGCAA+TGG | - | chr1_1:59287976-59287995 | Msa0032270:intron | 25.0% |
| ! | AAGTTACTAACTAAGTTACT+TGG | - | chr1_1:59288201-59288220 | Msa0032270:intron | 25.0% |
| ! | AGTTACTAACTAAGTTACTT+GGG | - | chr1_1:59288202-59288221 | Msa0032270:intron | 25.0% |
| ! | ATATGGTGATATTAGCTATT+GGG | - | chr1_1:59288402-59288421 | Msa0032270:intron | 25.0% |
| ! | TCAACAAAAGCTAATGTATT+TGG | + | chr1_1:59288548-59288567 | None:intergenic | 25.0% |
| !!! | TTTTTTTACCCGTATCAATA+TGG | - | chr1_1:59288816-59288835 | Msa0032270:intron | 25.0% |
| !! | AGATGAAAGCTTAATTTTAG+GGG | - | chr1_1:59289276-59289295 | Msa0032270:intron | 25.0% |
| !!! | ATTATAGTGGAAGAAGATTT+TGG | + | chr1_1:59289465-59289484 | None:intergenic | 25.0% |
| ! | TAGTCTCCAATTTAAATTGA+AGG | + | chr1_1:59289535-59289554 | None:intergenic | 25.0% |
| !! | GTTTAATTTATGCTGTTACT+AGG | + | chr1_1:59289695-59289714 | None:intergenic | 25.0% |
| ! | AACAGCATAAATTAAACAAG+TGG | - | chr1_1:59289698-59289717 | Msa0032270:intron | 25.0% |
| ! | GATAGATGTCATCTTATAAT+AGG | - | chr1_1:59289730-59289749 | Msa0032270:intron | 25.0% |
| ! | TAGATGTCATCTTATAATAG+GGG | - | chr1_1:59289732-59289751 | Msa0032270:intron | 25.0% |
| ! | TACTGACGAAAAATATTACA+GGG | + | chr1_1:59290042-59290061 | None:intergenic | 25.0% |
| ! | TTACTGACGAAAAATATTAC+AGG | + | chr1_1:59290043-59290062 | None:intergenic | 25.0% |
| ! | AGTTTAGAGGAAACAAATTA+GGG | + | chr1_1:59290180-59290199 | None:intergenic | 25.0% |
| ! | AAGTTTAGAGGAAACAAATT+AGG | + | chr1_1:59290181-59290200 | None:intergenic | 25.0% |
| ! | AATGATATGCTTAAGTTTAG+AGG | + | chr1_1:59290193-59290212 | None:intergenic | 25.0% |
| !!! | CACAAACCTTATAGTTTTAT+GGG | + | chr1_1:59290334-59290353 | None:intergenic | 25.0% |
| !!! | ACACAAACCTTATAGTTTTA+TGG | + | chr1_1:59290335-59290354 | None:intergenic | 25.0% |
| !!! | ATTGGATTTTTTGCATGATT+AGG | - | chr1_1:59290514-59290533 | Msa0032270:intron | 25.0% |
| ! | CTGCAATAAAACAATAAAAC+AGG | + | chr1_1:59290654-59290673 | None:intergenic | 25.0% |
| !!! | CTGTTTTATTGTTTTATTGC+AGG | - | chr1_1:59290652-59290671 | Msa0032270:intron | 25.0% |
| !! | AAATTGATTCCTTCATCAAT+GGG | - | chr1_1:59290687-59290706 | Msa0032270:intron | 25.0% |
| ! | TACCTGAAATATTCTCTTTA+CGG | + | chr1_1:59290818-59290837 | None:intergenic | 25.0% |
| ! | ATTTAAGCCTATTGTTAATG+AGG | + | chr1_1:59290941-59290960 | None:intergenic | 25.0% |
| ! | TTAAGTGATTAAACTTTGCA+GGG | + | chr1_1:59291035-59291054 | None:intergenic | 25.0% |
| ! | TTTAAGTGATTAAACTTTGC+AGG | + | chr1_1:59292118-59292137 | None:intergenic | 25.0% |
| ! | ACAACATCAAAATCATATTC+CGG | - | chr1_1:59291721-59291740 | Msa0032270:intron | 25.0% |
| ! | TTTAAGTGATTAAACTTTGC+GGG | - | chr1_1:59292118-59292137 | Msa0032270:intron | 25.0% |
| !!! | TGATTCATATTGCCATTTTA+AGG | - | chr1_1:59292260-59292279 | Msa0032270:intron | 25.0% |
| ! | AATTAGGAAAGTCCTTAAAA+TGG | + | chr1_1:59292275-59292294 | None:intergenic | 25.0% |
| !! | TCTAAAAGTGCGTATTAATT+AGG | + | chr1_1:59292291-59292310 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGGGTAATTCAAT+TGG | + | chr1_1:59292421-59292440 | None:intergenic | 25.0% |
| !! | TGTTCTAGATTAATATTACG+AGG | - | chr1_1:59292538-59292557 | Msa0032270:intron | 25.0% |
| !!! | TTTTTTGTGTTTCATTGTAG+AGG | + | chr1_1:59292755-59292774 | None:intergenic | 25.0% |
| !!! | TTAAGTTATTTTCTTGGTTG+CGG | - | chr1_1:59293308-59293327 | Msa0032270:intron | 25.0% |
| ! | AATATCACTCTTCTCAATTT+AGG | - | chr1_1:59293461-59293480 | Msa0032270:intron | 25.0% |
| ! | TTCATTACAACATTTGTCTA+GGG | + | chr1_1:59294465-59294484 | None:intergenic | 25.0% |
| ! | ATTCATTACAACATTTGTCT+AGG | + | chr1_1:59294466-59294485 | None:intergenic | 25.0% |
| ! | CAAAATAAAAGAATCTCTGT+TGG | + | chr1_1:59295108-59295127 | None:intergenic | 25.0% |
| !!! | CAACAGAGATTCTTTTATTT+TGG | - | chr1_1:59295106-59295125 | Msa0032270:intron | 25.0% |
| ! | TTCAATCAAATTGATACCAA+TGG | - | chr1_1:59287054-59287073 | Msa0032270:intron | 25.0% |
| !!! | AACTATAGCTTTGTTAATTG+CGG | - | chr1_1:59295580-59295599 | Msa0032270:intron | 25.0% |
| ! | CCATAAATAAAACTAATGAG+CGG | - | chr1_1:59295690-59295709 | Msa0032270:intron | 25.0% |
| !! | ACTTTGATAATTATGTTCCT+CGG | + | chr1_1:59296069-59296088 | None:intergenic | 25.0% |
| !!! | AATAAGGAAGATTGATAATG+TGG | - | chr1_1:59296309-59296328 | Msa0032270:intron | 25.0% |
| ! | GTCTCAAAAATCTGATATAT+CGG | + | chr1_1:59296663-59296682 | None:intergenic | 25.0% |
| ! | CATAAAGAATTCATAAAGAG+TGG | - | chr1_1:59297063-59297082 | Msa0032270:intron | 25.0% |
| !!! | TAGTTTTTTTTCTTAGCTAG+GGG | + | chr1_1:59297196-59297215 | None:intergenic | 25.0% |
| !!! | GTAGTTTTTTTTCTTAGCTA+GGG | + | chr1_1:59297197-59297216 | None:intergenic | 25.0% |
| !!! | TGTAGTTTTTTTTCTTAGCT+AGG | + | chr1_1:59297198-59297217 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTTTGCCTTGG+GGG | - | chr1_1:59297326-59297345 | Msa0032270:intron | 25.0% |
| !!! | TTTGTAGTTTTTTCTTAGCT+AGG | - | chr1_1:59297386-59297405 | Msa0032270:intron | 25.0% |
| !!! | TTGTAGTTTTTTCTTAGCTA+GGG | - | chr1_1:59297387-59297406 | Msa0032270:intron | 25.0% |
| ! | ATATTATTAGATGTTGTGTG+TGG | + | chr1_1:59297518-59297537 | None:intergenic | 25.0% |
| ! | ATTTCATAAATATCTACCGT+TGG | - | chr1_1:59298337-59298356 | Msa0032270:intron | 25.0% |
| !! | GTTATAAGCAATGATTTTAC+TGG | - | chr1_1:59298650-59298669 | Msa0032270:intron | 25.0% |
| ! | AGGGTTGTATAAATTAAATG+TGG | + | chr1_1:59298859-59298878 | None:intergenic | 25.0% |
| !! | TTTACACGAATTGGATTTTA+GGG | - | chr1_1:59299152-59299171 | Msa0032270:intron | 25.0% |
| ! | AAAGCTAATGCTTTATACTT+AGG | + | chr1_1:59299457-59299476 | None:intergenic | 25.0% |
| AATCCCAATTGATATTCTGA+GGG | + | chr1_1:59286334-59286353 | None:intergenic | 30.0% | |
| TAATCCCAATTGATATTCTG+AGG | + | chr1_1:59286335-59286354 | None:intergenic | 30.0% | |
| ! | ATTAGGTCATAAACCGTTTT+CGG | - | chr1_1:59286754-59286773 | Msa0032270:intron | 30.0% |
| !!! | TCTCTATGAGATTTTTTGTC+GGG | - | chr1_1:59286850-59286869 | Msa0032270:CDS | 30.0% |
| !! | ATTCAACTCAGTTTTAGTCA+AGG | - | chr1_1:59286888-59286907 | Msa0032270:CDS | 30.0% |
| ! | AATATTAGTGGTGATGATAC+AGG | - | chr1_1:59286945-59286964 | Msa0032270:CDS | 30.0% |
| !! | ACTTGCTATTGTGGAATAAT+AGG | - | chr1_1:59287267-59287286 | Msa0032270:intron | 30.0% |
| !! | CTTGCTATTGTGGAATAATA+GGG | - | chr1_1:59287268-59287287 | Msa0032270:intron | 30.0% |
| ! | TTGCTATTGTGGAATAATAG+GGG | - | chr1_1:59287269-59287288 | Msa0032270:intron | 30.0% |
| TAATTTATTACGCTTCTGCT+AGG | + | chr1_1:59287656-59287675 | None:intergenic | 30.0% | |
| CACCCAATTCACTTTATTAA+TGG | - | chr1_1:59287849-59287868 | Msa0032270:intron | 30.0% | |
| TCATTCCAAAGACATACTTA+GGG | - | chr1_1:59288243-59288262 | Msa0032270:intron | 30.0% | |
| GATATGGTGATATTAGCTAT+TGG | - | chr1_1:59288401-59288420 | Msa0032270:intron | 30.0% | |
| !!! | TTCTTATATTTTGGGACAGA+GGG | + | chr1_1:59288481-59288500 | None:intergenic | 30.0% |
| !!! | TTTCTTATATTTTGGGACAG+AGG | + | chr1_1:59288482-59288501 | None:intergenic | 30.0% |
| CCAAATACATTAACTTTCGT+TGG | + | chr1_1:59288512-59288531 | None:intergenic | 30.0% | |
| CCAACGAAAGTTAATGTATT+TGG | - | chr1_1:59288509-59288528 | Msa0032270:intron | 30.0% | |
| ATGCACGTGCATATAAATAT+AGG | + | chr1_1:59288623-59288642 | None:intergenic | 30.0% | |
| GACAAAATTACGAGACAATT+TGG | + | chr1_1:59289167-59289186 | None:intergenic | 30.0% | |
| AATAAAGACTTATGGCTTAG+TGG | + | chr1_1:59289226-59289245 | None:intergenic | 30.0% | |
| ! | GATGAAAGCTTAATTTTAGG+GGG | - | chr1_1:59289277-59289296 | Msa0032270:intron | 30.0% |
| TTGACAATTGAGACTATGTT+TGG | + | chr1_1:59289619-59289638 | None:intergenic | 30.0% | |
| TAATTGAGGTGATTCATTAG+TGG | - | chr1_1:59289651-59289670 | Msa0032270:intron | 30.0% | |
| ATTAAACAAGTGGTGCTTAA+TGG | - | chr1_1:59289708-59289727 | Msa0032270:intron | 30.0% | |
| ACAGGGATTGAAAATATTGA+TGG | + | chr1_1:59290025-59290044 | None:intergenic | 30.0% | |
| TTCACACCCATAAAACTATA+AGG | - | chr1_1:59290325-59290344 | Msa0032270:CDS | 30.0% | |
| !!! | GATTTTTTGCATGATTAGGA+TGG | - | chr1_1:59290518-59290537 | Msa0032270:intron | 30.0% |
| ! | GAAATTGATTCCTTCATCAA+TGG | - | chr1_1:59290686-59290705 | Msa0032270:intron | 30.0% |
| TCAACAGATGATAGTTTCAT+AGG | + | chr1_1:59290717-59290736 | None:intergenic | 30.0% | |
| TACGGAGAAGATTTATTGTA+GGG | + | chr1_1:59290800-59290819 | None:intergenic | 30.0% | |
| TTACGGAGAAGATTTATTGT+AGG | + | chr1_1:59290801-59290820 | None:intergenic | 30.0% | |
| TAAGTGATTAAACTTTGCAG+GGG | + | chr1_1:59291034-59291053 | None:intergenic | 30.0% | |
| !!! | ATTTTGCTAATTTGATGACG+TGG | + | chr1_1:59291088-59291107 | None:intergenic | 30.0% |
| ACGTCATCAAATTAGCAAAA+TGG | - | chr1_1:59291087-59291106 | Msa0032270:intron | 30.0% | |
| ATCAAATTAGCAAAATGGCA+TGG | - | chr1_1:59291092-59291111 | Msa0032270:intron | 30.0% | |
| TCAAATTAGCAAAATGGCAT+GGG | - | chr1_1:59291093-59291112 | Msa0032270:intron | 30.0% | |
| ATACTTTGCTTAGTTAACGA+GGG | + | chr1_1:59291133-59291152 | None:intergenic | 30.0% | |
| AGAAAAGAAAATGATAGCAG+GGG | + | chr1_1:59291176-59291195 | None:intergenic | 30.0% | |
| GAGAAAAGAAAATGATAGCA+GGG | + | chr1_1:59291177-59291196 | None:intergenic | 30.0% | |
| AGAGAAAAGAAAATGATAGC+AGG | + | chr1_1:59291178-59291197 | None:intergenic | 30.0% | |
| TACTGTATTGTAGATTCAAG+AGG | + | chr1_1:59291301-59291320 | None:intergenic | 30.0% | |
| CAAAGAATTAAATCCACACT+TGG | + | chr1_1:59291360-59291379 | None:intergenic | 30.0% | |
| TTCTTTGCAAGATGAATTAG+TGG | - | chr1_1:59291373-59291392 | Msa0032270:intron | 30.0% | |
| AGGAAGAAAATTGAAGAACA+CGG | - | chr1_1:59291453-59291472 | Msa0032270:intron | 30.0% | |
| ! | TGAAATTGTGTTGCAGTTTT+CGG | - | chr1_1:59291775-59291794 | Msa0032270:intron | 30.0% |
| ! | TCATTTTGCACAATCATCTT+CGG | + | chr1_1:59291826-59291845 | None:intergenic | 30.0% |
| AGATGATTGTGCAAAATGAA+TGG | - | chr1_1:59291827-59291846 | Msa0032270:intron | 30.0% | |
| GATGGTGTAAAATAGATTGA+TGG | - | chr1_1:59291892-59291911 | Msa0032270:intron | 30.0% | |
| !! | GTAAAACAGATTGATGATGA+TGG | - | chr1_1:59291916-59291935 | Msa0032270:intron | 30.0% |
| AACATGGCTATGAATAAACA+TGG | + | chr1_1:59291957-59291976 | None:intergenic | 30.0% | |
| CCATGATTGAAGAATAAACA+TGG | + | chr1_1:59291973-59291992 | None:intergenic | 30.0% | |
| CCATGTTTATTCTTCAATCA+TGG | - | chr1_1:59291970-59291989 | Msa0032270:intron | 30.0% | |
| GAGAAAGAAGATGAAATCAA+GGG | - | chr1_1:59292011-59292030 | Msa0032270:intron | 30.0% | |
| ATTTCACAGACAAACATGAA+AGG | + | chr1_1:59292046-59292065 | None:intergenic | 30.0% | |
| TTAAGTGATTAAACTTTGCG+GGG | - | chr1_1:59292119-59292138 | Msa0032270:intron | 30.0% | |
| TGAAGAAGACAAATCAAACT+AGG | - | chr1_1:59292504-59292523 | Msa0032270:intron | 30.0% | |
| AAGCAAAATAAAGACAAGCA+TGG | - | chr1_1:59292615-59292634 | Msa0032270:intron | 30.0% | |
| AATAAAGACAAGCATGGTAA+CGG | - | chr1_1:59292621-59292640 | Msa0032270:intron | 30.0% | |
| TGTGTGCAAATATATAGACT+TGG | + | chr1_1:59292730-59292749 | None:intergenic | 30.0% | |
| !! | TTTCTCTAAAATGAGAGAAG+TGG | + | chr1_1:59293062-59293081 | None:intergenic | 30.0% |
| TATTGTTAACACTTACCAGT+TGG | + | chr1_1:59294216-59294235 | None:intergenic | 30.0% | |
| AAAATTATTCAATGCGAGGA+CGG | + | chr1_1:59294409-59294428 | None:intergenic | 30.0% | |
| ATGTTAAGTGAACATATTGC+TGG | + | chr1_1:59294492-59294511 | None:intergenic | 30.0% | |
| CGATTTCAAAACATGGATAT+GGG | + | chr1_1:59294682-59294701 | None:intergenic | 30.0% | |
| !!! | CCATATCCATGTTTTGAAAT+CGG | - | chr1_1:59294680-59294699 | Msa0032270:intron | 30.0% |
| !!! | CATATCCATGTTTTGAAATC+GGG | - | chr1_1:59294681-59294700 | Msa0032270:intron | 30.0% |
| !!! | ATATCCATGTTTTGAAATCG+GGG | - | chr1_1:59294682-59294701 | Msa0032270:intron | 30.0% |
| ! | TAATTATTTAGAATCCGGTC+CGG | - | chr1_1:59294865-59294884 | Msa0032270:intron | 30.0% |
| !!! | AACATGTGTTTTTTGAGTAC+AGG | - | chr1_1:59295284-59295303 | Msa0032270:intron | 30.0% |
| CAAAGCTATAGTTAACTGTA+AGG | + | chr1_1:59295573-59295592 | None:intergenic | 30.0% | |
| !!! | CCGCTCATTAGTTTTATTTA+TGG | + | chr1_1:59295693-59295712 | None:intergenic | 30.0% |
| CCTTATTATCATCATTTCAG+CGG | + | chr1_1:59296296-59296315 | None:intergenic | 30.0% | |
| TTTACGTGTATGGTTATGTA+AGG | + | chr1_1:59296392-59296411 | None:intergenic | 30.0% | |
| TGCGAAATTATTTACGTGTA+TGG | + | chr1_1:59296402-59296421 | None:intergenic | 30.0% | |
| ! | TTAATTTGAGAGCAGTACTA+AGG | + | chr1_1:59296532-59296551 | None:intergenic | 30.0% |
| AAGACTAATTCGATTAAGAC+AGG | + | chr1_1:59296709-59296728 | None:intergenic | 30.0% | |
| ! | TGTCTTAATCGAATTAGTCT+TGG | - | chr1_1:59296708-59296727 | Msa0032270:intron | 30.0% |
| GATTCTCTTTAACCAATTCT+TGG | - | chr1_1:59296981-59297000 | Msa0032270:intron | 30.0% | |
| !!! | TTAATTTTTTTTGCCTTGGG+GGG | - | chr1_1:59297327-59297346 | Msa0032270:intron | 30.0% |
| !!! | TGTAGTTTTTTCTTAGCTAG+GGG | - | chr1_1:59297388-59297407 | Msa0032270:intron | 30.0% |
| ! | ATTTTCCAAAGTTGCGATTT+TGG | + | chr1_1:59297414-59297433 | None:intergenic | 30.0% |
| ! | ATCGCAACTTTGGAAAATTA+AGG | - | chr1_1:59297416-59297435 | Msa0032270:intron | 30.0% |
| ! | TCGCAACTTTGGAAAATTAA+GGG | - | chr1_1:59297417-59297436 | Msa0032270:intron | 30.0% |
| !! | TTTGTGGGTCGATTTTTATA+AGG | - | chr1_1:59297626-59297645 | Msa0032270:intron | 30.0% |
| TTACTAGCTCACAACTTAAT+TGG | + | chr1_1:59297878-59297897 | None:intergenic | 30.0% | |
| AGTTGAGAAGTAAAAGGATA+AGG | + | chr1_1:59297924-59297943 | None:intergenic | 30.0% | |
| ATGATATATGTTGTCCGAAT+CGG | + | chr1_1:59298232-59298251 | None:intergenic | 30.0% | |
| ! | CTAAATTTTACCTTGTGTAG+AGG | + | chr1_1:59298264-59298283 | None:intergenic | 30.0% |
| CAACCTTTGAATTAATAGTG+TGG | - | chr1_1:59298542-59298561 | Msa0032270:intron | 30.0% | |
| CTAGAAACGCTTGAATTTAT+AGG | + | chr1_1:59298703-59298722 | None:intergenic | 30.0% | |
| CTATAAATTCAAGCGTTTCT+AGG | - | chr1_1:59298701-59298720 | Msa0032270:intron | 30.0% | |
| !! | ATTGTTCTGTGTTCTTGTTT+TGG | - | chr1_1:59298806-59298825 | Msa0032270:CDS | 30.0% |
| ! | GTTTACACGAATTGGATTTT+AGG | - | chr1_1:59299151-59299170 | Msa0032270:intron | 30.0% |
| ATTTGAACTTTAGTCCTTTG+TGG | - | chr1_1:59299259-59299278 | Msa0032270:intron | 30.0% | |
| TTTGAACTTTAGTCCTTTGT+GGG | - | chr1_1:59299260-59299279 | Msa0032270:intron | 30.0% | |
| TACACACTCATCCAATAATA+TGG | + | chr1_1:59299304-59299323 | None:intergenic | 30.0% | |
| !! | CTTTCATGTTTGTTGATGAT+AGG | - | chr1_1:59299473-59299492 | Msa0032270:CDS | 30.0% |
| ATTATTGATCAATGCCACAA+TGG | - | chr1_1:59299534-59299553 | Msa0032270:CDS | 30.0% | |
| TTATTGATCAATGCCACAAT+GGG | - | chr1_1:59299535-59299554 | Msa0032270:CDS | 30.0% | |
| ! | AACTATGCTTTTGTAGATTG+TGG | - | chr1_1:59299636-59299655 | Msa0032270:five_prime_UTR | 30.0% |
| TGTGTTTCATAGTAGAAGCA+TGG | + | chr1_1:59286185-59286204 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTGTGTTTCCTTGT+GGG | - | chr1_1:59286248-59286267 | Msa0032270:CDS | 35.0% |
| ! | TGATATTCTGAGGGTTGTAA+AGG | + | chr1_1:59286325-59286344 | None:intergenic | 35.0% |
| ACAACCCTCAGAATATCAAT+TGG | - | chr1_1:59286327-59286346 | Msa0032270:intron | 35.0% | |
| CAACCCTCAGAATATCAATT+GGG | - | chr1_1:59286328-59286347 | Msa0032270:intron | 35.0% | |
| !! | ATACTTTTTACGCCATTCCA+AGG | + | chr1_1:59286402-59286421 | None:intergenic | 35.0% |
| TTGGAATGGCGTAAAAAGTA+TGG | - | chr1_1:59286401-59286420 | Msa0032270:intron | 35.0% | |
| ! | AATGGCGTAAAAAGTATGGT+TGG | - | chr1_1:59286405-59286424 | Msa0032270:intron | 35.0% |
| TCATAGAAACAAGCCGAAAA+CGG | + | chr1_1:59286693-59286712 | None:intergenic | 35.0% | |
| !!! | CTCTATGAGATTTTTTGTCG+GGG | - | chr1_1:59286851-59286870 | Msa0032270:CDS | 35.0% |
| !!! | TCTATGAGATTTTTTGTCGG+GGG | - | chr1_1:59286852-59286871 | Msa0032270:CDS | 35.0% |
| TCAAGTAACAGTGAGAATAG+TGG | - | chr1_1:59286990-59287009 | Msa0032270:CDS | 35.0% | |
| TCAAATTGATACCAATGGAC+AGG | - | chr1_1:59287059-59287078 | Msa0032270:intron | 35.0% | |
| CAAATTGATACCAATGGACA+GGG | - | chr1_1:59287060-59287079 | Msa0032270:intron | 35.0% | |
| ! | TGTGGAATAATAGGGGATTT+TGG | - | chr1_1:59287276-59287295 | Msa0032270:intron | 35.0% |
| ! | TTTTTACCAAAGCAATGGTG+AGG | - | chr1_1:59287981-59288000 | Msa0032270:intron | 35.0% |
| !!! | GGAATGAGTTTTTTTGTCAC+TGG | + | chr1_1:59288230-59288249 | None:intergenic | 35.0% |
| CTCATTCCAAAGACATACTT+AGG | - | chr1_1:59288242-59288261 | Msa0032270:intron | 35.0% | |
| GTATTCCCTAAGTATGTCTT+TGG | + | chr1_1:59288251-59288270 | None:intergenic | 35.0% | |
| AAGACATACTTAGGGAATAC+CGG | - | chr1_1:59288251-59288270 | Msa0032270:intron | 35.0% | |
| !!! | CTAGTAATTTTTTTCCGCAC+CGG | + | chr1_1:59288366-59288385 | None:intergenic | 35.0% |
| AATAGAAGGCCAAGAATGTT+TGG | - | chr1_1:59288688-59288707 | Msa0032270:intron | 35.0% | |
| !! | TCACTTTGAGACTCAATTCA+TGG | - | chr1_1:59288779-59288798 | Msa0032270:intron | 35.0% |
| !! | CACTTTGAGACTCAATTCAT+GGG | - | chr1_1:59288780-59288799 | Msa0032270:intron | 35.0% |
| TAGCCAACTCCATATTGATA+CGG | + | chr1_1:59288828-59288847 | None:intergenic | 35.0% | |
| CATGTAATATGTAGTAGTCG+AGG | + | chr1_1:59289073-59289092 | None:intergenic | 35.0% | |
| ATAGATTAAGAAGTCGCACA+CGG | + | chr1_1:59289124-59289143 | None:intergenic | 35.0% | |
| !! | ATAGTGGAAGAAGATTTTGG+AGG | + | chr1_1:59289462-59289481 | None:intergenic | 35.0% |
| GGATGACAAAATAGATGGAT+TGG | + | chr1_1:59290632-59290651 | None:intergenic | 35.0% | |
| AACAGGGATGACAAAATAGA+TGG | + | chr1_1:59290637-59290656 | None:intergenic | 35.0% | |
| ! | ATCATCTGTTGATTGCATCA+TGG | - | chr1_1:59290725-59290744 | Msa0032270:intron | 35.0% |
| ACGGAGAAGATTTATTGTAG+GGG | + | chr1_1:59290799-59290818 | None:intergenic | 35.0% | |
| CTCCGTAAAGAGAATATTTC+AGG | - | chr1_1:59290813-59290832 | Msa0032270:intron | 35.0% | |
| TATTGTTAATGAGGTTGCTG+AGG | + | chr1_1:59290932-59290951 | None:intergenic | 35.0% | |
| TCAGCAACCTCATTAACAAT+AGG | - | chr1_1:59290931-59290950 | Msa0032270:intron | 35.0% | |
| CATACTTTGCTTAGTTAACG+AGG | + | chr1_1:59291134-59291153 | None:intergenic | 35.0% | |
| AAGAAGGAAGAAGAAGGTAA+TGG | + | chr1_1:59291216-59291235 | None:intergenic | 35.0% | |
| AGAAGAAAGAAGGAAGAAGA+AGG | + | chr1_1:59291222-59291241 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTGCTATTGCTGT+TGG | + | chr1_1:59291251-59291270 | None:intergenic | 35.0% |
| TTGCAAGATGAATTAGTGGT+TGG | - | chr1_1:59291377-59291396 | Msa0032270:intron | 35.0% | |
| TGCAAGATGAATTAGTGGTT+GGG | - | chr1_1:59291378-59291397 | Msa0032270:intron | 35.0% | |
| !! | TGGTTGGGTTTTGATGTTTT+GGG | - | chr1_1:59291393-59291412 | Msa0032270:intron | 35.0% |
| !!! | CTTTCGATGATGTTGTTTTG+CGG | + | chr1_1:59291750-59291769 | None:intergenic | 35.0% |
| TGTGCAAAATGAATGGTGAA+TGG | - | chr1_1:59291834-59291853 | Msa0032270:intron | 35.0% | |
| GTGCAAAATGAATGGTGAAT+GGG | - | chr1_1:59291835-59291854 | Msa0032270:intron | 35.0% | |
| GGTGTAAAACAGATTGATGA+TGG | - | chr1_1:59291874-59291893 | Msa0032270:intron | 35.0% | |
| GGAGAAAGAAGATGAAATCA+AGG | - | chr1_1:59292010-59292029 | Msa0032270:intron | 35.0% | |
| !! | CAGATGTTAATTTGATGACG+TGG | - | chr1_1:59292066-59292085 | Msa0032270:intron | 35.0% |
| TAAGTGATTAAACTTTGCGG+GGG | - | chr1_1:59292120-59292139 | Msa0032270:intron | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr1_1:59292148-59292167 | Msa0032270:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr1_1:59292149-59292168 | Msa0032270:intron | 35.0% |
| AACTAATCTCAAGTCCAACA+AGG | + | chr1_1:59292663-59292682 | None:intergenic | 35.0% | |
| ! | TGTTGGACTTGAGATTAGTT+AGG | - | chr1_1:59292663-59292682 | Msa0032270:intron | 35.0% |
| TTAGTAGTGTGTTTCCTTGT+GGG | - | chr1_1:59292813-59292832 | Msa0032270:CDS | 35.0% | |
| ACAACCCTCAGAATATTAAC+TGG | - | chr1_1:59292892-59292911 | Msa0032270:CDS | 35.0% | |
| CAACCCTCAGAATATTAACT+GGG | - | chr1_1:59292893-59292912 | Msa0032270:CDS | 35.0% | |
| AGTCCCAGTTAATATTCTGA+GGG | + | chr1_1:59292899-59292918 | None:intergenic | 35.0% | |
| TAGTCCCAGTTAATATTCTG+AGG | + | chr1_1:59292900-59292919 | None:intergenic | 35.0% | |
| !! | CTTTGTTGCACTAACTTGTT+GGG | - | chr1_1:59293346-59293365 | Msa0032270:intron | 35.0% |
| !!! | CAATGTTTTAAAATCCGGAC+CGG | - | chr1_1:59293717-59293736 | Msa0032270:intron | 35.0% |
| AACAATATTGTGCTGCATGT+AGG | - | chr1_1:59294229-59294248 | Msa0032270:intron | 35.0% | |
| AGTATATGAGAATCGGGTAT+GGG | + | chr1_1:59294299-59294318 | None:intergenic | 35.0% | |
| AAGTATATGAGAATCGGGTA+TGG | + | chr1_1:59294300-59294319 | None:intergenic | 35.0% | |
| ACGGGTAAGTATATGAGAAT+CGG | + | chr1_1:59294306-59294325 | None:intergenic | 35.0% | |
| AAATTATTCAATGCGAGGAC+GGG | + | chr1_1:59294408-59294427 | None:intergenic | 35.0% | |
| AAAGGAGCGACTAAATCAAT+CGG | + | chr1_1:59294523-59294542 | None:intergenic | 35.0% | |
| ! | GTAATTTTCTGCATTCGAGA+CGG | - | chr1_1:59294610-59294629 | Msa0032270:intron | 35.0% |
| ! | TAATTTTCTGCATTCGAGAC+GGG | - | chr1_1:59294611-59294630 | Msa0032270:intron | 35.0% |
| TCAAAACATGGATATGGGAT+GGG | + | chr1_1:59294677-59294696 | None:intergenic | 35.0% | |
| TTCAAAACATGGATATGGGA+TGG | + | chr1_1:59294678-59294697 | None:intergenic | 35.0% | |
| CCGATTTCAAAACATGGATA+TGG | + | chr1_1:59294683-59294702 | None:intergenic | 35.0% | |
| ! | TTTTCCCCGATTTCAAAACA+TGG | + | chr1_1:59294689-59294708 | None:intergenic | 35.0% |
| AATTATCAAACTGTGGCTAG+TGG | + | chr1_1:59294835-59294854 | None:intergenic | 35.0% | |
| TGTCGTAGAAGTTCATGTTA+AGG | - | chr1_1:59295156-59295175 | Msa0032270:intron | 35.0% | |
| TGCCAAATAAGAGAGAATTG+TGG | - | chr1_1:59295354-59295373 | Msa0032270:intron | 35.0% | |
| GCCAAATAAGAGAGAATTGT+GGG | - | chr1_1:59295355-59295374 | Msa0032270:intron | 35.0% | |
| ACCCACAATTCTCTCTTATT+TGG | + | chr1_1:59295359-59295378 | None:intergenic | 35.0% | |
| TCAAATTGATACCAATGGAC+AGG | - | chr1_1:59287059-59287078 | Msa0032270:intron | 35.0% | |
| CAAATTGATACCAATGGACA+GGG | - | chr1_1:59287060-59287079 | Msa0032270:intron | 35.0% | |
| !! | ACTGTACATGACTTGCTATT+TGG | - | chr1_1:59295780-59295799 | Msa0032270:intron | 35.0% |
| TTATGTGTGTGAGAGACATT+TGG | + | chr1_1:59295820-59295839 | None:intergenic | 35.0% | |
| ACATAACAAGATTGCACTTG+TGG | - | chr1_1:59295834-59295853 | Msa0032270:intron | 35.0% | |
| GCAATCTCACATGATAACAA+GGG | - | chr1_1:59295949-59295968 | Msa0032270:intron | 35.0% | |
| CCGCTGAAATGATGATAATA+AGG | - | chr1_1:59296293-59296312 | Msa0032270:intron | 35.0% | |
| ! | GGTGGTTTTCCTAGAAAAAA+TGG | + | chr1_1:59296371-59296390 | None:intergenic | 35.0% |
| ACGTGAGTACATCAATATGT+TGG | - | chr1_1:59296504-59296523 | Msa0032270:intron | 35.0% | |
| CGTGAGTACATCAATATGTT+GGG | - | chr1_1:59296505-59296524 | Msa0032270:intron | 35.0% | |
| GTGAGTACATCAATATGTTG+GGG | - | chr1_1:59296506-59296525 | Msa0032270:intron | 35.0% | |
| GGATTTCTCAATCCAAGAAT+TGG | + | chr1_1:59296996-59297015 | None:intergenic | 35.0% | |
| ! | GCAACTTTGAGAAAGTAAGA+GGG | + | chr1_1:59297165-59297184 | None:intergenic | 35.0% |
| ! | CTTTCTCAAAGTTGCGATTT+TGG | - | chr1_1:59297170-59297189 | Msa0032270:intron | 35.0% |
| TGCCACAATTGCAAAACTTA+GGG | + | chr1_1:59297229-59297248 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | + | chr1_1:59297353-59297372 | None:intergenic | 35.0% |
| TGCTACAGTTGCAAAACTTA+GGG | - | chr1_1:59297357-59297376 | Msa0032270:intron | 35.0% | |
| ! | CGCAACTTTGGAAAATTAAG+GGG | - | chr1_1:59297418-59297437 | Msa0032270:intron | 35.0% |
| ! | GCAACTTTGGAAAATTAAGG+GGG | - | chr1_1:59297419-59297438 | Msa0032270:intron | 35.0% |
| ! | CAACTTTGGAAAATTAAGGG+GGG | - | chr1_1:59297420-59297439 | Msa0032270:intron | 35.0% |
| !! | AGAGTGACATTGTTACTTTG+TGG | - | chr1_1:59297610-59297629 | Msa0032270:intron | 35.0% |
| !! | GAGTGACATTGTTACTTTGT+GGG | - | chr1_1:59297611-59297630 | Msa0032270:intron | 35.0% |
| TCAAAGCAAAAATCCTTTGC+AGG | - | chr1_1:59297810-59297829 | Msa0032270:intron | 35.0% | |
| GATTCACTCGCTAAAAAGAT+TGG | + | chr1_1:59297844-59297863 | None:intergenic | 35.0% | |
| ACTAGCAGTTGAGAAGTAAA+AGG | + | chr1_1:59297930-59297949 | None:intergenic | 35.0% | |
| ! | TTTGTTTGCTAATTGCTTGC+AGG | + | chr1_1:59298159-59298178 | None:intergenic | 35.0% |
| CGTGAAAAGTAGTAGCAAAT+TGG | + | chr1_1:59298204-59298223 | None:intergenic | 35.0% | |
| GATTCGGACAACATATATCA+TGG | - | chr1_1:59298231-59298250 | Msa0032270:intron | 35.0% | |
| !! | TTTTTAACGAGGAGCATAAC+TGG | - | chr1_1:59298388-59298407 | Msa0032270:intron | 35.0% |
| !! | TTTTAACGAGGAGCATAACT+GGG | - | chr1_1:59298389-59298408 | Msa0032270:intron | 35.0% |
| GTGCCACACTATTAATTCAA+AGG | + | chr1_1:59298548-59298567 | None:intergenic | 35.0% | |
| TTACTGGCATCAATTAAAGC+CGG | - | chr1_1:59298666-59298685 | Msa0032270:intron | 35.0% | |
| GCTTGAATTTATAGGCTTCA+TGG | + | chr1_1:59298695-59298714 | None:intergenic | 35.0% | |
| GAACAATGACAACATGCATA+GGG | + | chr1_1:59298793-59298812 | None:intergenic | 35.0% | |
| AGAACAATGACAACATGCAT+AGG | + | chr1_1:59298794-59298813 | None:intergenic | 35.0% | |
| TATTTACTACGCCATGACAA+AGG | + | chr1_1:59298945-59298964 | None:intergenic | 35.0% | |
| TTGTCATGGCGTAGTAAATA+TGG | - | chr1_1:59298945-59298964 | Msa0032270:intron | 35.0% | |
| ATTCAACTCAAATCCCACAA+AGG | + | chr1_1:59299276-59299295 | None:intergenic | 35.0% | |
| TAGGTGACAAACACTAAAAC+TGG | - | chr1_1:59299492-59299511 | Msa0032270:CDS | 35.0% | |
| TATTGATCAATGCCACAATG+GGG | - | chr1_1:59299536-59299555 | Msa0032270:CDS | 35.0% | |
| ACAGAGAACTTTGAGCTTGT+TGG | - | chr1_1:59286229-59286248 | Msa0032270:CDS | 40.0% | |
| !!! | GTTGGTTTTGTGTTTCCTTG+TGG | - | chr1_1:59286247-59286266 | Msa0032270:CDS | 40.0% |
| ! | TATTCTGAGGGTTGTAAAGG+TGG | + | chr1_1:59286322-59286341 | None:intergenic | 40.0% |
| TAACTATAAGGTGACCCTTC+TGG | + | chr1_1:59287089-59287108 | None:intergenic | 40.0% | |
| !!! | AATGAGTTTTGAGAGGGTTG+TGG | - | chr1_1:59287686-59287705 | Msa0032270:intron | 40.0% |
| AGACATACTTAGGGAATACC+GGG | - | chr1_1:59288252-59288271 | Msa0032270:intron | 40.0% | |
| AATACCGGGTTCGATTTCTA+GGG | - | chr1_1:59288266-59288285 | Msa0032270:intron | 40.0% | |
| ACCATTGGTAGAATGGAAAC+CGG | - | chr1_1:59288344-59288363 | Msa0032270:intron | 40.0% | |
| GACTCAATTCATGGGATTGA+AGG | - | chr1_1:59288788-59288807 | Msa0032270:intron | 40.0% | |
| TACCCGTATCAATATGGAGT+TGG | - | chr1_1:59288822-59288841 | Msa0032270:intron | 40.0% | |
| AGCCAACTCCATATTGATAC+GGG | + | chr1_1:59288827-59288846 | None:intergenic | 40.0% | |
| TAGATTAAGAAGTCGCACAC+GGG | + | chr1_1:59289123-59289142 | None:intergenic | 40.0% | |
| GAGACTATGTTTGGAAGTTC+AGG | + | chr1_1:59289610-59289629 | None:intergenic | 40.0% | |
| AGTAAATACCACTCTCTCTC+CGG | - | chr1_1:59290218-59290237 | Msa0032270:intron | 40.0% | |
| ATAGGCTTTCCCATTGATGA+AGG | + | chr1_1:59290699-59290718 | None:intergenic | 40.0% | |
| CGGAGAAGATTTATTGTAGG+GGG | + | chr1_1:59290798-59290817 | None:intergenic | 40.0% | |
| ! | TGTTTTTCGTCCCTGCAAAT+AGG | - | chr1_1:59290962-59290981 | Msa0032270:intron | 40.0% |
| ! | GTTTTTCGTCCCTGCAAATA+GGG | - | chr1_1:59290963-59290982 | Msa0032270:intron | 40.0% |
| ! | TTTTTCGTCCCTGCAAATAG+GGG | - | chr1_1:59290964-59290983 | Msa0032270:intron | 40.0% |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | chr1_1:59291022-59291041 | None:intergenic | 40.0% | |
| !! | GCATTGATTAACTGGGTCAA+GGG | + | chr1_1:59292088-59292107 | None:intergenic | 40.0% |
| !! | TGACGTGGCATTGATTAACT+GGG | + | chr1_1:59292081-59292100 | None:intergenic | 40.0% |
| !! | ATGACGTGGCATTGATTAAC+TGG | + | chr1_1:59292080-59292099 | None:intergenic | 40.0% |
| TTAGCAAAATGGCATGGGAA+TGG | - | chr1_1:59291098-59291117 | Msa0032270:intron | 40.0% | |
| ! | AAGGAAGAAGAAGGTAATGG+TGG | + | chr1_1:59291213-59291232 | None:intergenic | 40.0% |
| ! | TTGTTGCTATTGCTGTTGGT+GGG | + | chr1_1:59291247-59291266 | None:intergenic | 40.0% |
| !! | CACTTGGTTTGTTAAGCTTC+TGG | + | chr1_1:59291344-59291363 | None:intergenic | 40.0% |
| GAAGCTTAACAAACCAAGTG+TGG | - | chr1_1:59291344-59291363 | Msa0032270:intron | 40.0% | |
| !! | GTGGTTGGGTTTTGATGTTT+TGG | - | chr1_1:59291392-59291411 | Msa0032270:intron | 40.0% |
| !!! | GGTTTTGATGTTTTGGGACA+CGG | - | chr1_1:59291399-59291418 | Msa0032270:intron | 40.0% |
| GAGAAGAGGATGAAGAAGAA+AGG | - | chr1_1:59291433-59291452 | Msa0032270:intron | 40.0% | |
| !!! | TGATGTTGTTTTGCGGTTAC+CGG | + | chr1_1:59291743-59291762 | None:intergenic | 40.0% |
| TGAATGGTGAATGGGATTGT+AGG | - | chr1_1:59291843-59291862 | Msa0032270:intron | 40.0% | |
| ATGGGATTGTAGGACAATGA+AGG | - | chr1_1:59291853-59291872 | Msa0032270:intron | 40.0% | |
| ATGGAACACGAGAAAGAAGA+GGG | - | chr1_1:59291989-59292008 | Msa0032270:intron | 40.0% | |
| !! | ATGACGTGGCATTGATTAAC+TGG | - | chr1_1:59292080-59292099 | Msa0032270:intron | 40.0% |
| !! | TGACGTGGCATTGATTAACT+GGG | - | chr1_1:59292081-59292100 | Msa0032270:intron | 40.0% |
| !! | GCATTGATTAACTGGGTCAA+GGG | - | chr1_1:59292088-59292107 | Msa0032270:intron | 40.0% |
| TTTGCGGGGGCAAAAAAAAA+AGG | - | chr1_1:59292133-59292152 | Msa0032270:intron | 40.0% | |
| ! | TTTTTCGTCCCTGCAAATAG+GGG | + | chr1_1:59290964-59290983 | None:intergenic | 40.0% |
| ! | GTTTTTCGTCCCTGCAAATA+GGG | + | chr1_1:59290963-59290982 | None:intergenic | 40.0% |
| ! | TGTTTTTCGTCCCTGCAAAT+AGG | + | chr1_1:59290962-59290981 | None:intergenic | 40.0% |
| CATTAATGTCGTGTCGTGTA+TGG | - | chr1_1:59292693-59292712 | Msa0032270:intron | 40.0% | |
| GTTAGTAGTGTGTTTCCTTG+TGG | - | chr1_1:59292812-59292831 | Msa0032270:CDS | 40.0% | |
| TCAGAGTGCAAACAACGTTA+GGG | - | chr1_1:59292854-59292873 | Msa0032270:CDS | 40.0% | |
| ! | TATTTGCTACGCCATGACAA+GGG | + | chr1_1:59292966-59292985 | None:intergenic | 40.0% |
| ! | ATATTTGCTACGCCATGACA+AGG | + | chr1_1:59292967-59292986 | None:intergenic | 40.0% |
| TTGTCATGGCGTAGCAAATA+TGG | - | chr1_1:59292966-59292985 | Msa0032270:intron | 40.0% | |
| CCAACAAGTTAGTGCAACAA+AGG | + | chr1_1:59293348-59293367 | None:intergenic | 40.0% | |
| ! | CCTTTGTTGCACTAACTTGT+TGG | - | chr1_1:59293345-59293364 | Msa0032270:intron | 40.0% |
| ! | CTTGTTGGGTTGTCTTTAGT+AGG | - | chr1_1:59293360-59293379 | Msa0032270:intron | 40.0% |
| ! | AGTCGATTCAGTTAAGGCAT+TGG | - | chr1_1:59293741-59293760 | Msa0032270:intron | 40.0% |
| AACAAGTTCACATAGCCAAC+TGG | - | chr1_1:59294198-59294217 | Msa0032270:intron | 40.0% | |
| GTATATGAGAATCGGGTATG+GGG | + | chr1_1:59294298-59294317 | None:intergenic | 40.0% | |
| CGGGTAAGTATATGAGAATC+GGG | + | chr1_1:59294305-59294324 | None:intergenic | 40.0% | |
| TTCAAATTCTCATCCCCGTT+GGG | + | chr1_1:59294342-59294361 | None:intergenic | 40.0% | |
| AATTATTCAATGCGAGGACG+GGG | + | chr1_1:59294407-59294426 | None:intergenic | 40.0% | |
| ! | TTTTGACAGGGTTTGGGTAT+GGG | + | chr1_1:59294718-59294737 | None:intergenic | 40.0% |
| !! | ATTTTGACAGGGTTTGGGTA+TGG | + | chr1_1:59294719-59294738 | None:intergenic | 40.0% |
| ATACCCAAACCCTGTCAAAA+TGG | - | chr1_1:59294718-59294737 | Msa0032270:intron | 40.0% | |
| TACCCAAACCCTGTCAAAAT+GGG | - | chr1_1:59294719-59294738 | Msa0032270:intron | 40.0% | |
| !! | TTCCCATTTTGACAGGGTTT+GGG | + | chr1_1:59294724-59294743 | None:intergenic | 40.0% |
| !! | TTTCCCATTTTGACAGGGTT+TGG | + | chr1_1:59294725-59294744 | None:intergenic | 40.0% |
| !! | GGGTTTTTCCCATTTTGACA+GGG | + | chr1_1:59294730-59294749 | None:intergenic | 40.0% |
| ATGGGAAAAACCCGTCAAAT+TGG | - | chr1_1:59294737-59294756 | Msa0032270:intron | 40.0% | |
| TGGGAAAAACCCGTCAAATT+GGG | - | chr1_1:59294738-59294757 | Msa0032270:intron | 40.0% | |
| AAAACCCGTCAAATTGGGTT+TGG | - | chr1_1:59294743-59294762 | Msa0032270:intron | 40.0% | |
| !! | CGGTGCTACGTATACTTAAT+TGG | - | chr1_1:59295710-59295729 | Msa0032270:intron | 40.0% |
| CTCTTTCACACATGACATTC+TGG | + | chr1_1:59295860-59295879 | None:intergenic | 40.0% | |
| CGCAATCTCACATGATAACA+AGG | - | chr1_1:59295948-59295967 | Msa0032270:intron | 40.0% | |
| ACGTGTATGGTTATGTAAGG+TGG | + | chr1_1:59296389-59296408 | None:intergenic | 40.0% | |
| ! | CGCAACTTTGAGAAAGTAAG+AGG | + | chr1_1:59297166-59297185 | None:intergenic | 40.0% |
| CCACAATTGCAAAACTTAGG+GGG | + | chr1_1:59297227-59297246 | None:intergenic | 40.0% | |
| GCCACAATTGCAAAACTTAG+GGG | + | chr1_1:59297228-59297247 | None:intergenic | 40.0% | |
| CTGCCACAATTGCAAAACTT+AGG | + | chr1_1:59297230-59297249 | None:intergenic | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | - | chr1_1:59297356-59297375 | Msa0032270:intron | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | - | chr1_1:59297358-59297377 | Msa0032270:intron | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | - | chr1_1:59297359-59297378 | Msa0032270:intron | 40.0% | |
| TATTCTCTCTCGCGTGAAAA+TGG | + | chr1_1:59297776-59297795 | None:intergenic | 40.0% | |
| AAGCAAAAATCCTTTGCAGG+TGG | - | chr1_1:59297813-59297832 | Msa0032270:intron | 40.0% | |
| AAAATCCTTTGCAGGTGGAA+TGG | - | chr1_1:59297818-59297837 | Msa0032270:intron | 40.0% | |
| ! | GTAGTAGCAAATTGGCTTAC+TGG | + | chr1_1:59298196-59298215 | None:intergenic | 40.0% |
| !! | CTTTTCACGTTTTGCCGATT+CGG | - | chr1_1:59298215-59298234 | Msa0032270:intron | 40.0% |
| AACGACGAAGTAGAAACAGA+AGG | - | chr1_1:59298285-59298304 | Msa0032270:intron | 40.0% | |
| AAACTTCACAATCCCACATG+AGG | + | chr1_1:59298471-59298490 | None:intergenic | 40.0% | |
| TTTATAGGCTTCATGGTTGC+CGG | + | chr1_1:59298688-59298707 | None:intergenic | 40.0% | |
| ! | ATTAAATGTGGACTGCACAG+TGG | + | chr1_1:59298847-59298866 | None:intergenic | 40.0% |
| ! | TTAGTGCATTTTGCGCAACA+TGG | - | chr1_1:59298907-59298926 | Msa0032270:intron | 40.0% |
| ! | TAGTGCATTTTGCGCAACAT+GGG | - | chr1_1:59298908-59298927 | Msa0032270:intron | 40.0% |
| CATGGCGTAGTAAATATGGT+TGG | - | chr1_1:59298949-59298968 | Msa0032270:intron | 40.0% | |
| !!! | AATTGGATTTTAGGGCGAGT+CGG | - | chr1_1:59299160-59299179 | Msa0032270:intron | 40.0% |
| ATTGATCAATGCCACAATGG+GGG | - | chr1_1:59299537-59299556 | Msa0032270:CDS | 40.0% | |
| TCACTAACATCGTTCCCACA+AGG | + | chr1_1:59286265-59286284 | None:intergenic | 45.0% | |
| GTGGGAACGATGTTAGTGAA+TGG | - | chr1_1:59286266-59286285 | Msa0032270:CDS | 45.0% | |
| GTGAATGGTCAGAGTGCAAA+CGG | - | chr1_1:59286281-59286300 | Msa0032270:CDS | 45.0% | |
| CAGTGTATACTGTGCTACCT+GGG | - | chr1_1:59286364-59286383 | Msa0032270:intron | 45.0% | |
| ATGCAAACCAGTCCTTGGAA+TGG | - | chr1_1:59286387-59286406 | Msa0032270:intron | 45.0% | |
| ! | TTTTACGCCATTCCAAGGAC+TGG | + | chr1_1:59286397-59286416 | None:intergenic | 45.0% |
| ! | TATGGTTGGACTGCCTTTTG+TGG | - | chr1_1:59286419-59286438 | Msa0032270:intron | 45.0% |
| CAGGTGACAAATACTGCAAC+TGG | - | chr1_1:59286964-59286983 | Msa0032270:CDS | 45.0% | |
| ATCCAAGTCTAATCCACCGT+TGG | + | chr1_1:59287025-59287044 | None:intergenic | 45.0% | |
| AATGGACAGGGTTACCAGAA+GGG | - | chr1_1:59287072-59287091 | Msa0032270:intron | 45.0% | |
| AGCAGTGCTACACGTATACT+TGG | - | chr1_1:59287202-59287221 | Msa0032270:intron | 45.0% | |
| GTCTTACCTCACCATTGCTT+TGG | + | chr1_1:59287990-59288009 | None:intergenic | 45.0% | |
| GAATACCGGGTTCGATTTCT+AGG | - | chr1_1:59288265-59288284 | Msa0032270:intron | 45.0% | |
| ! | ATACCGGGTTCGATTTCTAG+GGG | - | chr1_1:59288267-59288286 | Msa0032270:intron | 45.0% |
| TTTCCCCTAGAAATCGAACC+CGG | + | chr1_1:59288273-59288292 | None:intergenic | 45.0% | |
| CTAATCTGACTCATGCGTAG+AGG | + | chr1_1:59288318-59288337 | None:intergenic | 45.0% | |
| ! | TCAGATTAGTCGTCCACCAT+TGG | - | chr1_1:59288329-59288348 | Msa0032270:intron | 45.0% |
| GGTTTCCATTCTACCAATGG+TGG | + | chr1_1:59288345-59288364 | None:intergenic | 45.0% | |
| ! | ACCGGTTTCCATTCTACCAA+TGG | + | chr1_1:59288348-59288367 | None:intergenic | 45.0% |
| AGAAGGCCAAGAATGTTTGG+TGG | - | chr1_1:59288691-59288710 | Msa0032270:intron | 45.0% | |
| GAAGGCCAAGAATGTTTGGT+GGG | - | chr1_1:59288692-59288711 | Msa0032270:intron | 45.0% | |
| !! | TTTTAGGGGGAGAGAATGAG+AGG | - | chr1_1:59289290-59289309 | Msa0032270:intron | 45.0% |
| TTCAGGAAGAGAGGAGATTG+AGG | + | chr1_1:59289593-59289612 | None:intergenic | 45.0% | |
| GTTTGGAAGTTCAGGAAGAG+AGG | + | chr1_1:59289602-59289621 | None:intergenic | 45.0% | |
| ! | ATTTTAGACCGGAGAGAGAG+TGG | + | chr1_1:59290229-59290248 | None:intergenic | 45.0% |
| TTAAGCGACCCCTATTTGCA+GGG | + | chr1_1:59292180-59292199 | None:intergenic | 45.0% | |
| TTTAAGCGACCCCTATTTGC+AGG | + | chr1_1:59292179-59292198 | None:intergenic | 45.0% | |
| !! | GGCATTGATTAACTGGGTCA+AGG | + | chr1_1:59292087-59292106 | None:intergenic | 45.0% |
| ! | GAAGAAGAAGGTAATGGTGG+AGG | + | chr1_1:59291210-59291229 | None:intergenic | 45.0% |
| TTGGTGGGAGAGAAGAAAGA+AGG | + | chr1_1:59291232-59291251 | None:intergenic | 45.0% | |
| ! | GTTGTTGCTATTGCTGTTGG+TGG | + | chr1_1:59291248-59291267 | None:intergenic | 45.0% |
| TGCTTGTCCTGAACAATCTG+AGG | - | chr1_1:59291587-59291606 | Msa0032270:intron | 45.0% | |
| TTGTCCTGAACAATCTGAGG+CGG | - | chr1_1:59291590-59291609 | Msa0032270:intron | 45.0% | |
| ! | TGTGACTGTGTTGACATTGC+CGG | + | chr1_1:59291656-59291675 | None:intergenic | 45.0% |
| TTAGTGTTGTGACTGTGTCG+TGG | + | chr1_1:59291689-59291708 | None:intergenic | 45.0% | |
| !!! | GAAGCTGCTTTTTCCGTCAT+CGG | + | chr1_1:59291804-59291823 | None:intergenic | 45.0% |
| CATGGAACACGAGAAAGAAG+AGG | - | chr1_1:59291988-59292007 | Msa0032270:intron | 45.0% | |
| !! | GGCATTGATTAACTGGGTCA+AGG | - | chr1_1:59292087-59292106 | Msa0032270:intron | 45.0% |
| TTTAAGCGACCCCTATTTGC+AGG | - | chr1_1:59292179-59292198 | Msa0032270:intron | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | - | chr1_1:59292180-59292199 | Msa0032270:intron | 45.0% | |
| CAAATGCAGTGTTGCCTTGT+TGG | - | chr1_1:59292646-59292665 | Msa0032270:intron | 45.0% | |
| TCACTAACATCGTTCCCACA+AGG | + | chr1_1:59286265-59286284 | None:intergenic | 45.0% | |
| GTCAGAGTGCAAACAACGTT+AGG | - | chr1_1:59292853-59292872 | Msa0032270:CDS | 45.0% | |
| CAGTGTTTACTGTGCTACCT+GGG | - | chr1_1:59292929-59292948 | Msa0032270:CDS | 45.0% | |
| CATGGCGTAGCAAATATGGT+TGG | - | chr1_1:59292970-59292989 | Msa0032270:intron | 45.0% | |
| ! | TATGGTTGGACTGCCTTTTG+TGG | - | chr1_1:59286419-59286438 | Msa0032270:intron | 45.0% |
| ! | ACCGGTAGTCGATTCAGTTA+AGG | - | chr1_1:59293735-59293754 | Msa0032270:intron | 45.0% |
| GCCTTAACTGAATCGACTAC+CGG | + | chr1_1:59293739-59293758 | None:intergenic | 45.0% | |
| AGACTGGGTCAATAGTCATG+CGG | + | chr1_1:59293808-59293827 | None:intergenic | 45.0% | |
| TATTGTGCTGCATGTAGGCA+TGG | - | chr1_1:59294234-59294253 | Msa0032270:intron | 45.0% | |
| CTGCATGTAGGCATGGTAAT+GGG | - | chr1_1:59294241-59294260 | Msa0032270:intron | 45.0% | |
| ! | TGCATGTAGGCATGGTAATG+GGG | - | chr1_1:59294242-59294261 | Msa0032270:intron | 45.0% |
| TTGGGTATGAGTAGGGTAAC+GGG | + | chr1_1:59294324-59294343 | None:intergenic | 45.0% | |
| GTTGGGTATGAGTAGGGTAA+CGG | + | chr1_1:59294325-59294344 | None:intergenic | 45.0% | |
| GTTACCCTACTCATACCCAA+CGG | - | chr1_1:59294324-59294343 | Msa0032270:intron | 45.0% | |
| TTACCCTACTCATACCCAAC+GGG | - | chr1_1:59294325-59294344 | Msa0032270:intron | 45.0% | |
| GTTCAAATTCTCATCCCCGT+TGG | + | chr1_1:59294343-59294362 | None:intergenic | 45.0% | |
| ATGGATATGGGATGGGTAAC+GGG | + | chr1_1:59294670-59294689 | None:intergenic | 45.0% | |
| CATGGATATGGGATGGGTAA+CGG | + | chr1_1:59294671-59294690 | None:intergenic | 45.0% | |
| !! | CGGGTTTTTCCCATTTTGAC+AGG | + | chr1_1:59294731-59294750 | None:intergenic | 45.0% |
| CGAACCAAACCCAATTTGAC+GGG | + | chr1_1:59294750-59294769 | None:intergenic | 45.0% | |
| CCGAACCAAACCCAATTTGA+CGG | + | chr1_1:59294751-59294770 | None:intergenic | 45.0% | |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | - | chr1_1:59294748-59294767 | Msa0032270:intron | 45.0% |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | - | chr1_1:59294749-59294768 | Msa0032270:intron | 45.0% |
| GACAACAAAACCCATACCTG+TGG | + | chr1_1:59294782-59294801 | None:intergenic | 45.0% | |
| ! | GGTTGGTCAGTTAATCAGAC+CGG | + | chr1_1:59294974-59294993 | None:intergenic | 45.0% |
| !!! | TTTTAAAACCCAGACCGACC+CGG | + | chr1_1:59295037-59295056 | None:intergenic | 45.0% |
| CAGGTGACAAATACTGCAAC+TGG | - | chr1_1:59286964-59286983 | Msa0032270:CDS | 45.0% | |
| AAATACTGCAACTGGAGCTC+AGG | - | chr1_1:59286972-59286991 | Msa0032270:CDS | 45.0% | |
| ! | TCAGGTAACGGTGAGAATAG+TGG | - | chr1_1:59295462-59295481 | Msa0032270:intron | 45.0% |
| ATCTAAGTCCAGTCCACCAT+TGG | + | chr1_1:59295497-59295516 | None:intergenic | 45.0% | |
| !! | CTCGGTGTTGAAGTGATAGA+CGG | + | chr1_1:59296051-59296070 | None:intergenic | 45.0% |
| ! | TTGACGTTTTACAAGCGGTG+TGG | + | chr1_1:59296685-59296704 | None:intergenic | 45.0% |
| ! | CAGGCTTGACGTTTTACAAG+CGG | + | chr1_1:59296690-59296709 | None:intergenic | 45.0% |
| TCGCGACACATGACAAAACA+TGG | + | chr1_1:59296963-59296982 | None:intergenic | 45.0% | |
| CAATTGCAAAACTTAGGGGG+CGG | + | chr1_1:59297224-59297243 | None:intergenic | 45.0% | |
| ! | CCCCCTAAGTTTTGCAATTG+TGG | - | chr1_1:59297224-59297243 | Msa0032270:intron | 45.0% |
| ACCGAGTCAAAATGGGCATT+GGG | + | chr1_1:59297261-59297280 | None:intergenic | 45.0% | |
| AGCGTAGACCGAGTCAAAAT+GGG | + | chr1_1:59297268-59297287 | None:intergenic | 45.0% | |
| GACATGTGACACCTCACTTA+GGG | + | chr1_1:59297300-59297319 | None:intergenic | 45.0% | |
| TGACATGTGACACCTCACTT+AGG | + | chr1_1:59297301-59297320 | None:intergenic | 45.0% | |
| ! | CTCTCGCGTGAAAATGGATT+AGG | + | chr1_1:59297770-59297789 | None:intergenic | 45.0% |
| TGTGGCACAAAGATGCGTTA+AGG | - | chr1_1:59298560-59298579 | Msa0032270:intron | 45.0% | |
| TTCTATCTGAGTCGAGCCTT+TGG | + | chr1_1:59299587-59299606 | None:intergenic | 45.0% | |
| AGATAGAAGTGGGAATGCTC+AGG | - | chr1_1:59299599-59299618 | Msa0032270:exon | 45.0% | |
| GATAGAAGTGGGAATGCTCA+GGG | - | chr1_1:59299600-59299619 | Msa0032270:exon | 45.0% | |
| !!! | GTTTTATAATATATAAATAT+TGG | + | chr1_1:59287960-59287979 | None:intergenic | 5.0% |
| !!! | TTTTGAATAAAATTAAATTT+TGG | - | chr1_1:59295082-59295101 | Msa0032270:intron | 5.0% |
| GTCAGAGTGCAAACGGTGTA+AGG | - | chr1_1:59286288-59286307 | Msa0032270:CDS | 50.0% | |
| CCAGGTAGCACAGTATACAC+TGG | + | chr1_1:59286366-59286385 | None:intergenic | 50.0% | |
| CCAGTGTATACTGTGCTACC+TGG | - | chr1_1:59286363-59286382 | Msa0032270:intron | 50.0% | |
| CACAAGACTCTCTACCACGA+GGG | + | chr1_1:59286454-59286473 | None:intergenic | 50.0% | |
| ! | AGTCTTGTGGCAAGTGCTTG+AGG | - | chr1_1:59286465-59286484 | Msa0032270:intron | 50.0% |
| GTCTTGTGGCAAGTGCTTGA+GGG | - | chr1_1:59286466-59286485 | Msa0032270:intron | 50.0% | |
| CTTCTGGTAACCCTGTCCAT+TGG | + | chr1_1:59287073-59287092 | None:intergenic | 50.0% | |
| CAATGGACAGGGTTACCAGA+AGG | - | chr1_1:59287071-59287090 | Msa0032270:intron | 50.0% | |
| ! | GTGCTGTTCAACATGTCGTG+TGG | + | chr1_1:59287832-59287851 | None:intergenic | 50.0% |
| GTCGTCCACCATTGGTAGAA+TGG | - | chr1_1:59288337-59288356 | Msa0032270:intron | 50.0% | |
| TGGTAGAATGGAAACCGGTG+CGG | - | chr1_1:59288349-59288368 | Msa0032270:intron | 50.0% | |
| TGTCGCCCACCAAACATTCT+TGG | + | chr1_1:59288700-59288719 | None:intergenic | 50.0% | |
| ! | GAATGTTTGGTGGGCGACAT+TGG | - | chr1_1:59288701-59288720 | Msa0032270:intron | 50.0% |
| CGGTTGCAGAAGAAGAGAAG+AGG | - | chr1_1:59291419-59291438 | Msa0032270:intron | 50.0% | |
| AGCAAGTGAGACAAGGCACA+CGG | + | chr1_1:59291571-59291590 | None:intergenic | 50.0% | |
| CAGGACAAGCAAGTGAGACA+AGG | + | chr1_1:59291578-59291597 | None:intergenic | 50.0% | |
| ACATTGCCGGCGTTTAAGAG+CGG | + | chr1_1:59291643-59291662 | None:intergenic | 50.0% | |
| GTGGGAACGATGTTAGTGAG+TGG | - | chr1_1:59292831-59292850 | Msa0032270:CDS | 50.0% | |
| CCAGGTAGCACAGTAAACAC+TGG | + | chr1_1:59292931-59292950 | None:intergenic | 50.0% | |
| CCAGTGTTTACTGTGCTACC+TGG | - | chr1_1:59292928-59292947 | Msa0032270:CDS | 50.0% | |
| ATGCAAACCAGCCCTTGTCA+TGG | - | chr1_1:59292952-59292971 | Msa0032270:intron | 50.0% | |
| CCAACAGGCAGAGATTCTTG+CGG | - | chr1_1:59293017-59293036 | Msa0032270:intron | 50.0% | |
| AACTGAATCGACTACCGGTC+CGG | + | chr1_1:59293734-59293753 | None:intergenic | 50.0% | |
| GCATTGGATCACTGAGTCAG+TGG | - | chr1_1:59293757-59293776 | Msa0032270:intron | 50.0% | |
| TGGATCACTGAGTCAGTGGT+CGG | - | chr1_1:59293761-59293780 | Msa0032270:intron | 50.0% | |
| GCTGCATGTAGGCATGGTAA+TGG | - | chr1_1:59294240-59294259 | Msa0032270:intron | 50.0% | |
| TGAGAATCGGGTATGGGGAT+GGG | + | chr1_1:59294293-59294312 | None:intergenic | 50.0% | |
| ATGAGAATCGGGTATGGGGA+TGG | + | chr1_1:59294294-59294313 | None:intergenic | 50.0% | |
| TACCCTACTCATACCCAACG+GGG | - | chr1_1:59294326-59294345 | Msa0032270:intron | 50.0% | |
| ATCCCCGTTGGGTATGAGTA+GGG | + | chr1_1:59294331-59294350 | None:intergenic | 50.0% | |
| ! | TTCTGCATTCGAGACGGGTT+TGG | - | chr1_1:59294616-59294635 | Msa0032270:intron | 50.0% |
| ! | TCTGCATTCGAGACGGGTTT+GGG | - | chr1_1:59294617-59294636 | Msa0032270:intron | 50.0% |
| ! | ATTCGAGACGGGTTTGGGTA+TGG | - | chr1_1:59294622-59294641 | Msa0032270:intron | 50.0% |
| ! | TTCGAGACGGGTTTGGGTAT+GGG | - | chr1_1:59294623-59294642 | Msa0032270:intron | 50.0% |
| !! | GGGATGGGTAACGGGTATAT+AGG | + | chr1_1:59294662-59294681 | None:intergenic | 50.0% |
| CAGGGTTTGGGTATGGGTTT+GGG | + | chr1_1:59294712-59294731 | None:intergenic | 50.0% | |
| ACAGGGTTTGGGTATGGGTT+TGG | + | chr1_1:59294713-59294732 | None:intergenic | 50.0% | |
| !! | CAAATTGGGTTTGGTTCGGG+CGG | - | chr1_1:59294752-59294771 | Msa0032270:intron | 50.0% |
| !! | AAATTGGGTTTGGTTCGGGC+GGG | - | chr1_1:59294753-59294772 | Msa0032270:intron | 50.0% |
| TGGCTAGTGGTAGTTGAACC+GGG | + | chr1_1:59294822-59294841 | None:intergenic | 50.0% | |
| GTGGCTAGTGGTAGTTGAAC+CGG | + | chr1_1:59294823-59294842 | None:intergenic | 50.0% | |
| TCCTGGGTTGCTTGCATATC+CGG | - | chr1_1:59294952-59294971 | Msa0032270:intron | 50.0% | |
| ! | GTGGTGATGACTGATGATGC+AGG | - | chr1_1:59295417-59295436 | Msa0032270:intron | 50.0% |
| TGCAACTGGAGCTCAGGTAA+CGG | - | chr1_1:59295450-59295469 | Msa0032270:intron | 50.0% | |
| !! | ATAGTGGACCAGTGCTCCAA+TGG | - | chr1_1:59295478-59295497 | Msa0032270:intron | 50.0% |
| ATTCTGAACGCCCTGTCCAT+TGG | + | chr1_1:59295545-59295564 | None:intergenic | 50.0% | |
| ! | AATGGACAGGGCGTTCAGAA+TGG | - | chr1_1:59295544-59295563 | Msa0032270:intron | 50.0% |
| CGTCTATCACTTCAACACCG+AGG | - | chr1_1:59296049-59296068 | Msa0032270:intron | 50.0% | |
| !! | GAGTCAAAATGGGCATTGGG+GGG | + | chr1_1:59297258-59297277 | None:intergenic | 50.0% |
| !! | CGAGTCAAAATGGGCATTGG+GGG | + | chr1_1:59297259-59297278 | None:intergenic | 50.0% |
| ! | CCGAGTCAAAATGGGCATTG+GGG | + | chr1_1:59297260-59297279 | None:intergenic | 50.0% |
| !!! | CCCCAATGCCCATTTTGACT+CGG | - | chr1_1:59297257-59297276 | Msa0032270:intron | 50.0% |
| GACCGAGTCAAAATGGGCAT+TGG | + | chr1_1:59297262-59297281 | None:intergenic | 50.0% | |
| CAGCGTAGACCGAGTCAAAA+TGG | + | chr1_1:59297269-59297288 | None:intergenic | 50.0% | |
| AGGGGCCAAAATCGCAACTT+TGG | - | chr1_1:59297406-59297425 | Msa0032270:intron | 50.0% | |
| ATTGGCCATTCCACCTGCAA+AGG | + | chr1_1:59297826-59297845 | None:intergenic | 50.0% | |
| ! | TGGCTCTACACCTCTACACA+AGG | - | chr1_1:59298251-59298270 | Msa0032270:intron | 50.0% |
| TCACAATCCCACATGAGGCT+CGG | + | chr1_1:59298466-59298485 | None:intergenic | 50.0% | |
| ACAACCCTGAGCAGCATAAC+TGG | - | chr1_1:59298871-59298890 | Msa0032270:intron | 50.0% | |
| CAACCCTGAGCAGCATAACT+GGG | - | chr1_1:59298872-59298891 | Msa0032270:intron | 50.0% | |
| AGTCCCAGTTATGCTGCTCA+GGG | + | chr1_1:59298878-59298897 | None:intergenic | 50.0% | |
| AAGTCCCAGTTATGCTGCTC+AGG | + | chr1_1:59298879-59298898 | None:intergenic | 50.0% | |
| ATGCAGACCAGCCTTTGTCA+TGG | - | chr1_1:59298931-59298950 | Msa0032270:intron | 50.0% | |
| TACTACGCCATGACAAAGGC+TGG | + | chr1_1:59298941-59298960 | None:intergenic | 50.0% | |
| TATGGTTGGACTGCCTTCTG+TGG | - | chr1_1:59298963-59298982 | Msa0032270:intron | 50.0% | |
| TTCTTGTGGCCGTTGCTTGA+GGG | - | chr1_1:59299010-59299029 | Msa0032270:intron | 50.0% | |
| CCAAGCATACCCTCAAGCAA+CGG | + | chr1_1:59299022-59299041 | None:intergenic | 50.0% | |
| CCAAGTCTAATCCCCCATTG+TGG | + | chr1_1:59299551-59299570 | None:intergenic | 50.0% | |
| CCACAATGGGGGATTAGACT+TGG | - | chr1_1:59299548-59299567 | Msa0032270:CDS | 50.0% | |
| TGGACGTTGGTGTGTTCCAA+AGG | - | chr1_1:59299568-59299587 | Msa0032270:CDS | 50.0% | |
| AGGCTCGACTCAGATAGAAG+TGG | - | chr1_1:59299588-59299607 | Msa0032270:exon | 50.0% | |
| GGCTCGACTCAGATAGAAGT+GGG | - | chr1_1:59299589-59299608 | Msa0032270:exon | 50.0% | |
| !! | CAAGGACTGGTTTGCATCCC+AGG | + | chr1_1:59286384-59286403 | None:intergenic | 55.0% |
| CTGGGATGCAAACCAGTCCT+TGG | - | chr1_1:59286382-59286401 | Msa0032270:intron | 55.0% | |
| ! | ACTGCCTTTTGTGGACCCCA+GGG | - | chr1_1:59286428-59286447 | Msa0032270:intron | 55.0% |
| CCACAAGACTCTCTACCACG+AGG | + | chr1_1:59286455-59286474 | None:intergenic | 55.0% | |
| CCTCGTGGTAGAGAGTCTTG+TGG | - | chr1_1:59286452-59286471 | Msa0032270:intron | 55.0% | |
| !! | ATAGTGGACCAGTGCGCCAA+CGG | - | chr1_1:59287006-59287025 | Msa0032270:CDS | 55.0% |
| !! | CGCCAACGGTGGATTAGACT+TGG | - | chr1_1:59287020-59287039 | Msa0032270:intron | 55.0% |
| ! | ATGCGTAGAGGCATGCACAC+TGG | + | chr1_1:59288306-59288325 | None:intergenic | 55.0% |
| ! | CGAAGGCATGGTTGAGGTGA+CGG | + | chr1_1:59291548-59291567 | None:intergenic | 55.0% |
| CGTACCGCCTCAGATTGTTC+AGG | + | chr1_1:59291597-59291616 | None:intergenic | 55.0% | |
| ! | CAGTTTTCGGCGACCGATGA+CGG | - | chr1_1:59291788-59291807 | Msa0032270:intron | 55.0% |
| ! | ACTGCCTTTTGTGGACCAGC+CGG | - | chr1_1:59292993-59293012 | Msa0032270:intron | 55.0% |
| AGAATCTCTGCCTGTTGGCC+CGG | + | chr1_1:59293015-59293034 | None:intergenic | 55.0% | |
| CCGCAAGAATCTCTGCCTGT+TGG | + | chr1_1:59293020-59293039 | None:intergenic | 55.0% | |
| TGAGTCAGTGGTCGGACCAA+TGG | - | chr1_1:59293769-59293788 | Msa0032270:intron | 55.0% | |
| GAGTCAGTGGTCGGACCAAT+GGG | - | chr1_1:59293770-59293789 | Msa0032270:intron | 55.0% | |
| CGGACCAATGGGTCACTGAT+TGG | - | chr1_1:59293781-59293800 | Msa0032270:intron | 55.0% | |
| CGGTCCAATCAGTGACCCAT+TGG | + | chr1_1:59293788-59293807 | None:intergenic | 55.0% | |
| !! | TGTAGGCATGGTAATGGGGC+AGG | - | chr1_1:59294246-59294265 | Msa0032270:intron | 55.0% |
| !! | GTAGGCATGGTAATGGGGCA+GGG | - | chr1_1:59294247-59294266 | Msa0032270:intron | 55.0% |
| CATCCCCGTTGGGTATGAGT+AGG | + | chr1_1:59294332-59294351 | None:intergenic | 55.0% | |
| TTCAATGCGAGGACGGGGAT+GGG | + | chr1_1:59294402-59294421 | None:intergenic | 55.0% | |
| ATTCAATGCGAGGACGGGGA+TGG | + | chr1_1:59294403-59294422 | None:intergenic | 55.0% | |
| ! | GACGGGTTTGGGTATGGGTT+CGG | - | chr1_1:59294628-59294647 | Msa0032270:intron | 55.0% |
| ACGGGTTTGGGTATGGGTTC+GGG | - | chr1_1:59294629-59294648 | Msa0032270:intron | 55.0% | |
| TTTGGGTATGGGTTCGGGGT+GGG | - | chr1_1:59294634-59294653 | Msa0032270:intron | 55.0% | |
| CATGCCTAGCTGCATGTACC+CGG | - | chr1_1:59294801-59294820 | Msa0032270:intron | 55.0% | |
| TGAACCGGGTACATGCAGCT+AGG | + | chr1_1:59294808-59294827 | None:intergenic | 55.0% | |
| GTTATGACCCACCAGCGAAC+CGG | + | chr1_1:59294887-59294906 | None:intergenic | 55.0% | |
| ! | GGTTCGCTGGTGGGTCATAA+CGG | - | chr1_1:59294886-59294905 | Msa0032270:intron | 55.0% |
| AAACCCAGTATGACCCGTGC+GGG | + | chr1_1:59294933-59294952 | None:intergenic | 55.0% | |
| GAAACCCAGTATGACCCGTG+CGG | + | chr1_1:59294934-59294953 | None:intergenic | 55.0% | |
| ACGGGTCATACTGGGTTTCC+TGG | - | chr1_1:59294935-59294954 | Msa0032270:intron | 55.0% | |
| CGGGTCATACTGGGTTTCCT+GGG | - | chr1_1:59294936-59294955 | Msa0032270:intron | 55.0% | |
| ACCGGATATGCAAGCAACCC+AGG | + | chr1_1:59294956-59294975 | None:intergenic | 55.0% | |
| TCCTTTGTCCGAGCCTCATG+TGG | - | chr1_1:59298455-59298474 | Msa0032270:intron | 55.0% | |
| CCTTTGTCCGAGCCTCATGT+GGG | - | chr1_1:59298456-59298475 | Msa0032270:intron | 55.0% | |
| ACTGCCTTCTGTGGACCTGT+TGG | - | chr1_1:59298972-59298991 | Msa0032270:intron | 55.0% | |
| AGGACCAACAGGTCCACAGA+AGG | + | chr1_1:59298979-59298998 | None:intergenic | 55.0% | |
| TGTGGACCTGTTGGTCCTCA+AGG | - | chr1_1:59298981-59299000 | Msa0032270:intron | 55.0% | |
| !! | CCACAAGAAGCTTGGCCTTG+AGG | + | chr1_1:59298999-59299018 | None:intergenic | 55.0% |
| CCTCAAGGCCAAGCTTCTTG+TGG | - | chr1_1:59298996-59299015 | Msa0032270:intron | 55.0% | |
| AGCAACGGCCACAAGAAGCT+TGG | + | chr1_1:59299007-59299026 | None:intergenic | 55.0% | |
| CTTCTTGTGGCCGTTGCTTG+AGG | - | chr1_1:59299009-59299028 | Msa0032270:intron | 55.0% | |
| ! | CCGTTGCTTGAGGGTATGCT+TGG | - | chr1_1:59299019-59299038 | Msa0032270:intron | 55.0% |
| GGGGGATTAGACTTGGACGT+TGG | - | chr1_1:59299555-59299574 | Msa0032270:CDS | 55.0% | |
| ! | GACTGCCTTTTGTGGACCCC+AGG | - | chr1_1:59286427-59286446 | Msa0032270:intron | 60.0% |
| CTAATCCACCGTTGGCGCAC+TGG | + | chr1_1:59287017-59287036 | None:intergenic | 60.0% | |
| ! | GATAGAGTGCCATCGTCGCC+AGG | - | chr1_1:59291501-59291520 | Msa0032270:intron | 60.0% |
| ! | ATGGTTGAGGTGACGGCAGG+CGG | + | chr1_1:59291541-59291560 | None:intergenic | 60.0% |
| ! | ACACGGCGAAGGCATGGTTG+AGG | + | chr1_1:59291554-59291573 | None:intergenic | 60.0% |
| TGAGACAAGGCACACGGCGA+AGG | + | chr1_1:59291565-59291584 | None:intergenic | 60.0% | |
| !! | TTTAAGAGCGGTACCGGCGC+TGG | + | chr1_1:59291631-59291650 | None:intergenic | 60.0% |
| CCGGCGTTTAAGAGCGGTAC+CGG | + | chr1_1:59291637-59291656 | None:intergenic | 60.0% | |
| CCGGTACCGCTCTTAAACGC+CGG | - | chr1_1:59291634-59291653 | Msa0032270:intron | 60.0% | |
| !! | CAAGGGCTGGTTTGCATCCC+AGG | + | chr1_1:59292949-59292968 | None:intergenic | 60.0% |
| TGCTACGCCATGACAAGGGC+TGG | + | chr1_1:59292962-59292981 | None:intergenic | 60.0% | |
| ! | CTGCCTTTTGTGGACCAGCC+GGG | - | chr1_1:59292994-59293013 | Msa0032270:intron | 60.0% |
| TAATGGGGCAGGGTGGAGAC+AGG | - | chr1_1:59294257-59294276 | Msa0032270:intron | 60.0% | |
| ATACCCGAACCCGTCGGGAA+CGG | + | chr1_1:59294373-59294392 | None:intergenic | 60.0% | |
| TCAATGCGAGGACGGGGATG+GGG | + | chr1_1:59294401-59294420 | None:intergenic | 60.0% | |
| CGGGTTTGGGTATGGGTTCG+GGG | - | chr1_1:59294630-59294649 | Msa0032270:intron | 60.0% | |
| GTTTGGGTATGGGTTCGGGG+TGG | - | chr1_1:59294633-59294652 | Msa0032270:intron | 60.0% | |
| GGGCGGGTAACCACAGGTAT+GGG | - | chr1_1:59294769-59294788 | Msa0032270:intron | 60.0% | |
| ! | TAGAATCCGGTCCGGTTCGC+TGG | - | chr1_1:59294873-59294892 | Msa0032270:intron | 60.0% |
| TGCGGGTCGGGTGGACAAAT+CGG | + | chr1_1:59294916-59294935 | None:intergenic | 60.0% | |
| ATTTGTCCACCCGACCCGCA+CGG | - | chr1_1:59294916-59294935 | Msa0032270:intron | 60.0% | |
| AAAACCCAGACCGACCCGGT+CGG | + | chr1_1:59295033-59295052 | None:intergenic | 60.0% | |
| GTGGACCAGTGCTCCAATGG+TGG | - | chr1_1:59295481-59295500 | Msa0032270:intron | 60.0% | |
| CCAGTCCACCATTGGAGCAC+TGG | + | chr1_1:59295489-59295508 | None:intergenic | 60.0% | |
| !! | CCAGTGCTCCAATGGTGGAC+TGG | - | chr1_1:59295486-59295505 | Msa0032270:intron | 60.0% |
| !! | TGACTCGGTCTACGCTGACG+TGG | - | chr1_1:59297272-59297291 | Msa0032270:intron | 60.0% |
| CTGACGTGGCACCCTAAGTG+AGG | - | chr1_1:59297286-59297305 | Msa0032270:intron | 60.0% | |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | + | chr1_1:59297343-59297362 | None:intergenic | 60.0% |
| CCCACATGAGGCTCGGACAA+AGG | + | chr1_1:59298459-59298478 | None:intergenic | 60.0% | |
| !! | GCTTGGCCTTGAGGACCAAC+AGG | + | chr1_1:59298990-59299009 | None:intergenic | 60.0% |
| AGGGCCCTGGGGTCCACAAA+AGG | + | chr1_1:59286435-59286454 | None:intergenic | 65.0% | |
| TCTCTACCACGAGGGCCCTG+GGG | + | chr1_1:59286446-59286465 | None:intergenic | 65.0% | |
| CTCTCTACCACGAGGGCCCT+GGG | + | chr1_1:59286447-59286466 | None:intergenic | 65.0% | |
| ACTCTCTACCACGAGGGCCC+TGG | + | chr1_1:59286448-59286467 | None:intergenic | 65.0% | |
| GTGCCATCGTCGCCAGGTCT+CGG | - | chr1_1:59291507-59291526 | Msa0032270:intron | 65.0% | |
| GCGGAGTTACGACCGAGACC+TGG | + | chr1_1:59291522-59291541 | None:intergenic | 65.0% | |
| ! | GGCATGGTTGAGGTGACGGC+AGG | + | chr1_1:59291544-59291563 | None:intergenic | 65.0% |
| CAAGGCACACGGCGAAGGCA+TGG | + | chr1_1:59291560-59291579 | None:intergenic | 65.0% | |
| ! | TGGCCCGGCTGGTCCACAAA+AGG | + | chr1_1:59293000-59293019 | None:intergenic | 65.0% |
| !! | GGCATGGTAATGGGGCAGGG+TGG | - | chr1_1:59294250-59294269 | Msa0032270:intron | 65.0% |
| AACCCCATCCCCGTTCCCGA+CGG | - | chr1_1:59294360-59294379 | Msa0032270:intron | 65.0% | |
| AACCCGTCGGGAACGGGGAT+GGG | + | chr1_1:59294366-59294385 | None:intergenic | 65.0% | |
| ! | ATCCCCGTTCCCGACGGGTT+CGG | - | chr1_1:59294366-59294385 | Msa0032270:intron | 65.0% |
| TACCCGAACCCGTCGGGAAC+GGG | + | chr1_1:59294372-59294391 | None:intergenic | 65.0% | |
| CGAGGATACCCGAACCCGTC+GGG | + | chr1_1:59294378-59294397 | None:intergenic | 65.0% | |
| GCGAGGATACCCGAACCCGT+CGG | + | chr1_1:59294379-59294398 | None:intergenic | 65.0% | |
| ! | TGGTTCGGGCGGGTAACCAC+AGG | - | chr1_1:59294763-59294782 | Msa0032270:intron | 65.0% |
| CGGGCGGGTAACCACAGGTA+TGG | - | chr1_1:59294768-59294787 | Msa0032270:intron | 65.0% | |
| ! | AATCCGGTCCGGTTCGCTGG+TGG | - | chr1_1:59294876-59294895 | Msa0032270:intron | 65.0% |
| ! | ATCCGGTCCGGTTCGCTGGT+GGG | - | chr1_1:59294877-59294896 | Msa0032270:intron | 65.0% |
| TTTGTCCACCCGACCCGCAC+GGG | - | chr1_1:59294917-59294936 | Msa0032270:intron | 65.0% | |
| CAGTATGACCCGTGCGGGTC+GGG | + | chr1_1:59294928-59294947 | None:intergenic | 65.0% | |
| CCAGTATGACCCGTGCGGGT+CGG | + | chr1_1:59294929-59294948 | None:intergenic | 65.0% | |
| CGACCCGCACGGGTCATACT+GGG | - | chr1_1:59294927-59294946 | Msa0032270:intron | 65.0% | |
| TGACCAACCCACCCACCCCT+CGG | - | chr1_1:59294985-59295004 | Msa0032270:intron | 65.0% | |
| GTGGACCAGTGCGCCAACGG+TGG | - | chr1_1:59287009-59287028 | Msa0032270:CDS | 70.0% | |
| CGACCGAGACCTGGCGACGA+TGG | + | chr1_1:59291513-59291532 | None:intergenic | 70.0% | |
| CGCAACCTCTGCTCCAGCGC+CGG | - | chr1_1:59291615-59291634 | Msa0032270:intron | 70.0% | |
| TGTGGACCAGCCGGGCCAAC+AGG | - | chr1_1:59293002-59293021 | Msa0032270:intron | 70.0% | |
| TCTCTGCCTGTTGGCCCGGC+TGG | + | chr1_1:59293011-59293030 | None:intergenic | 70.0% | |
| ACCCCATCCCCGTTCCCGAC+GGG | - | chr1_1:59294361-59294380 | Msa0032270:intron | 70.0% | |
| ACCCGTCGGGAACGGGGATG+GGG | + | chr1_1:59294365-59294384 | None:intergenic | 70.0% | |
| GAACCCGTCGGGAACGGGGA+TGG | + | chr1_1:59294367-59294386 | None:intergenic | 70.0% | |
| ! | TCCCCGTTCCCGACGGGTTC+GGG | - | chr1_1:59294367-59294386 | Msa0032270:intron | 70.0% |
| ACCCGAACCCGTCGGGAACG+GGG | + | chr1_1:59294371-59294390 | None:intergenic | 70.0% | |
| GACCCACCAGCGAACCGGAC+CGG | + | chr1_1:59294882-59294901 | None:intergenic | 70.0% | |
| TATGACCCGTGCGGGTCGGG+TGG | + | chr1_1:59294925-59294944 | None:intergenic | 70.0% | |
| CCGACCCGCACGGGTCATAC+TGG | - | chr1_1:59294926-59294945 | Msa0032270:intron | 70.0% | |
| GACCAACCCACCCACCCCTC+GGG | - | chr1_1:59294986-59295005 | Msa0032270:intron | 70.0% | |
| AACCCGAGGGGTGGGTGGGT+TGG | + | chr1_1:59294991-59295010 | None:intergenic | 70.0% | |
| GAACCGGCAACCCGAGGGGT+GGG | + | chr1_1:59294999-59295018 | None:intergenic | 70.0% | |
| GGTCGAACCGGCAACCCGAG+GGG | + | chr1_1:59295003-59295022 | None:intergenic | 70.0% | |
| CGGTCGAACCGGCAACCCGA+GGG | + | chr1_1:59295004-59295023 | None:intergenic | 70.0% | |
| !! | CCTCGGGTTGCCGGTTCGAC+CGG | - | chr1_1:59295002-59295021 | Msa0032270:intron | 70.0% |
| !! | GGGTTGCCGGTTCGACCGGT+CGG | - | chr1_1:59295006-59295025 | Msa0032270:intron | 70.0% |
| GTCGGTCCGACCGGTCGAAC+CGG | + | chr1_1:59295015-59295034 | None:intergenic | 70.0% | |
| GTTCGACCGGTCGGACCGAC+CGG | - | chr1_1:59295015-59295034 | Msa0032270:intron | 70.0% | |
| TTCGACCGGTCGGACCGACC+GGG | - | chr1_1:59295016-59295035 | Msa0032270:intron | 70.0% | |
| TGTGGACCCCAGGGCCCTCG+TGG | - | chr1_1:59286437-59286456 | Msa0032270:intron | 75.0% | |
| !! | CGGTACCGGCGCTGGAGCAG+AGG | + | chr1_1:59291623-59291642 | None:intergenic | 75.0% |
| CGGCAACCCGAGGGGTGGGT+GGG | + | chr1_1:59294995-59295014 | None:intergenic | 75.0% | |
| ! | CCACCCACCCCTCGGGTTGC+CGG | - | chr1_1:59294993-59295012 | Msa0032270:intron | 75.0% |
| CGAACCGGCAACCCGAGGGG+TGG | + | chr1_1:59295000-59295019 | None:intergenic | 75.0% | |
| CCGGTCGAACCGGCAACCCG+AGG | + | chr1_1:59295005-59295024 | None:intergenic | 75.0% | |
| ACCGGTCGGACCGACCGGGT+CGG | - | chr1_1:59295020-59295039 | Msa0032270:intron | 75.0% | |
| ACCGACCCGGTCGGTCCGAC+CGG | + | chr1_1:59295024-59295043 | None:intergenic | 75.0% | |
| TCGGACCGACCGGGTCGGTC+TGG | - | chr1_1:59295025-59295044 | Msa0032270:intron | 75.0% | |
| CGGACCGACCGGGTCGGTCT+GGG | - | chr1_1:59295026-59295045 | Msa0032270:intron | 75.0% | |
| ! | GCGAGGACGGGGATGGGGCG+AGG | + | chr1_1:59294396-59294415 | None:intergenic | 80.0% |
| ! | CCGGCAACCCGAGGGGTGGG+TGG | + | chr1_1:59294996-59295015 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 59286155 | 59299665 | 59286155 | ID=Msa0032270;Name=Msa0032270 |
| chr1_1 | mRNA | 59286155 | 59299665 | 59286155 | ID=Msa0032270-mRNA-1;Parent=Msa0032270;Name=Msa0032270-mRNA-1;_AED=0.36;_eAED=0.36;_QI=63|0.4|0.33|1|0.6|0.33|6|0|394 |
| chr1_1 | exon | 59286155 | 59286325 | 59286155 | ID=Msa0032270-mRNA-1:exon:18299;Parent=Msa0032270-mRNA-1 |
| chr1_1 | exon | 59286789 | 59287036 | 59286789 | ID=Msa0032270-mRNA-1:exon:18298;Parent=Msa0032270-mRNA-1 |
| chr1_1 | exon | 59290219 | 59290381 | 59290219 | ID=Msa0032270-mRNA-1:exon:18297;Parent=Msa0032270-mRNA-1 |
| chr1_1 | exon | 59292768 | 59292962 | 59292768 | ID=Msa0032270-mRNA-1:exon:18296;Parent=Msa0032270-mRNA-1 |
| chr1_1 | exon | 59298716 | 59298853 | 59298716 | ID=Msa0032270-mRNA-1:exon:18295;Parent=Msa0032270-mRNA-1 |
| chr1_1 | exon | 59299333 | 59299665 | 59299333 | ID=Msa0032270-mRNA-1:exon:18294;Parent=Msa0032270-mRNA-1 |
| chr1_1 | five_prime_UTR | 59299603 | 59299665 | 59299603 | ID=Msa0032270-mRNA-1:five_prime_utr;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59299333 | 59299602 | 59299333 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59298716 | 59298853 | 59298716 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59292768 | 59292962 | 59292768 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59290219 | 59290381 | 59290219 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59286789 | 59287036 | 59286789 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| chr1_1 | CDS | 59286155 | 59286325 | 59286155 | ID=Msa0032270-mRNA-1:cds;Parent=Msa0032270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
