Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172410 | sp|P29063|PR4B_TOBAC | 70.896 | 134 | 39 | 0 | 8 | 141 | 9 | 142 | 1.38e-65 | 203 |
| Msa0172410 | sp|P29063|PR4B_TOBAC | 76.316 | 114 | 27 | 0 | 142 | 255 | 27 | 140 | 1.50e-59 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172410 | A0A5C7IBZ8 | 66.135 | 251 | 80 | 2 | 8 | 255 | 7 | 255 | 4.66e-119 | 350 |
| Msa0172410 | A0A5C7IBZ8 | 68.376 | 117 | 37 | 0 | 25 | 141 | 141 | 257 | 3.41e-52 | 180 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032270 | Msa0172410 | 0.897853 | 9.391816e-77 | -8.615850e-47 |
| Msa0074080 | Msa0172410 | 0.891987 | 2.403562e-74 | -8.615850e-47 |
| Msa0074090 | Msa0172410 | 0.838780 | 2.346401e-57 | -8.615850e-47 |
| Msa0127290 | Msa0172410 | 0.809907 | 1.500415e-50 | -8.615850e-47 |
| Msa0127300 | Msa0172410 | 0.902840 | 6.425058e-79 | -8.615850e-47 |
| Msa0172410 | Msa0172430 | 0.832831 | 7.552060e-56 | -8.615850e-47 |
| Msa0172410 | Msa0190640 | 0.811609 | 6.426660e-51 | -8.615850e-47 |
| Msa0172410 | Msa0232910 | 0.810387 | 1.182177e-50 | -8.615850e-47 |
| Msa0172410 | Msa0718470 | 0.805851 | 1.093470e-49 | -8.615850e-47 |
| Msa0172410 | Msa1026760 | 0.809144 | 2.188026e-50 | -8.615850e-47 |
| Msa0172410 | Msa1026790 | 0.812597 | 3.914102e-51 | -8.615850e-47 |
| Msa0172410 | Msa1154160 | 0.806995 | 6.273549e-50 | -8.615850e-47 |
| Msa0172410 | Msa1396830 | 0.853112 | 2.963952e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172410 | MtrunA17_Chr1g0190661 | 91.489 | 141 | 12 | 0 | 1 | 141 | 1 | 141 | 4.48e-94 | 273 |
| Msa0172410 | MtrunA17_Chr1g0190661 | 81.739 | 115 | 21 | 0 | 142 | 256 | 26 | 140 | 2.14e-66 | 202 |
| Msa0172410 | MtrunA17_Chr1g0190671 | 91.489 | 141 | 12 | 0 | 1 | 141 | 1 | 141 | 1.09e-92 | 269 |
| Msa0172410 | MtrunA17_Chr1g0190671 | 86.957 | 115 | 15 | 0 | 142 | 256 | 26 | 140 | 5.13e-69 | 209 |
| Msa0172410 | MtrunA17_Chr1g0190651 | 86.525 | 141 | 19 | 0 | 1 | 141 | 1 | 141 | 2.97e-86 | 253 |
| Msa0172410 | MtrunA17_Chr1g0190651 | 96.491 | 114 | 4 | 0 | 142 | 255 | 26 | 139 | 9.27e-77 | 229 |
| Msa0172410 | MtrunA17_Chr7g0274181 | 70.536 | 112 | 33 | 0 | 30 | 141 | 70 | 181 | 3.84e-55 | 176 |
| Msa0172410 | MtrunA17_Chr7g0274181 | 70.270 | 111 | 33 | 0 | 145 | 255 | 69 | 179 | 3.44e-52 | 168 |
| Msa0172410 | MtrunA17_Chr1g0190641 | 58.209 | 134 | 55 | 1 | 8 | 141 | 4 | 136 | 1.02e-52 | 167 |
| Msa0172410 | MtrunA17_Chr1g0190641 | 62.727 | 110 | 41 | 0 | 146 | 255 | 25 | 134 | 6.79e-48 | 155 |
| Msa0172410 | MtrunA17_Chr6g0483971 | 48.507 | 134 | 62 | 3 | 10 | 141 | 11 | 139 | 1.02e-36 | 131 |
| Msa0172410 | MtrunA17_Chr6g0483971 | 52.586 | 116 | 51 | 2 | 142 | 255 | 24 | 137 | 1.09e-34 | 126 |
| Msa0172410 | MtrunA17_Chr6g0484021 | 53.543 | 127 | 42 | 3 | 142 | 251 | 44 | 170 | 3.37e-36 | 135 |
| Msa0172410 | MtrunA17_Chr6g0484021 | 46.980 | 149 | 59 | 4 | 10 | 141 | 31 | 176 | 6.55e-36 | 134 |
| Msa0172410 | MtrunA17_Chr6g0484031 | 44.203 | 138 | 65 | 3 | 11 | 141 | 10 | 142 | 8.57e-30 | 116 |
| Msa0172410 | MtrunA17_Chr6g0484031 | 44.628 | 121 | 56 | 2 | 142 | 255 | 24 | 140 | 5.41e-28 | 111 |
| Msa0172410 | MtrunA17_Chr6g0484041 | 44.898 | 147 | 61 | 5 | 10 | 141 | 23 | 164 | 1.85e-29 | 116 |
| Msa0172410 | MtrunA17_Chr6g0484041 | 47.287 | 129 | 51 | 4 | 142 | 255 | 36 | 162 | 3.92e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172410 | AT3G04720.1 | 69.492 | 118 | 36 | 0 | 24 | 141 | 71 | 188 | 1.52e-56 | 180 |
| Msa0172410 | AT3G04720.1 | 70.175 | 114 | 34 | 0 | 142 | 255 | 73 | 186 | 4.16e-52 | 169 |
Find 80 sgRNAs with CRISPR-Local
Find 709 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTCATGGCGTAGCAAATA+TGG | 0.308099 | 1_4:-57463680 | Msa0172410:CDS |
| TCTCTGCCTGTTGGCCCAGC+TGG | 0.347389 | 1_4:+57463638 | None:intergenic |
| ATAACCCTCAGAATATTAAC+TGG | 0.349154 | 1_4:-57463754 | Msa0172410:CDS |
| ACAGAGAACTTTGAGCTTGT+TGG | 0.365729 | 1_4:-57471915 | Msa0172410:CDS |
| CAAGGACTGGTTTGCATCCC+AGG | 0.368235 | 1_4:+57471763 | None:intergenic |
| CAAGGGCTGGTTTGCATCCC+AGG | 0.379158 | 1_4:+57463700 | None:intergenic |
| GTCAGAGTGCAAACAATGTT+AGG | 0.382334 | 1_4:-57463793 | Msa0172410:intron |
| CTCTCTACCACGAGGGCCCT+GGG | 0.401142 | 1_4:+57471700 | None:intergenic |
| CAGGTGACAAATACTGCAAC+TGG | 0.420771 | 1_4:-57461151 | Msa0172410:CDS |
| CAGGTGACAAATACTGCAAC+TGG | 0.420771 | 1_4:-57471180 | Msa0172410:CDS |
| TGTGGACCAGCTGGGCCAAC+AGG | 0.421055 | 1_4:-57463644 | Msa0172410:CDS |
| ACAACCCTCAGAATATCAAT+TGG | 0.424622 | 1_4:-57471817 | Msa0172410:CDS |
| ACTCTCTACCACGAGGGCCC+TGG | 0.449243 | 1_4:+57471699 | None:intergenic |
| CTGGGATGCAAACCAGTCCT+TGG | 0.456847 | 1_4:-57471762 | Msa0172410:CDS |
| CAACCCTCAGAATATCAATT+GGG | 0.462594 | 1_4:-57471816 | Msa0172410:CDS |
| TAACTGTAAGGTGACCCTTC+TGG | 0.462881 | 1_4:+57471058 | None:intergenic |
| AGGGCCCTGGGGTCCACAAA+AGG | 0.466880 | 1_4:+57471712 | None:intergenic |
| GTCAGAGTGCAAACGGTGTA+AGG | 0.476091 | 1_4:-57471856 | Msa0172410:CDS |
| CCAGTGTATACTGTGCTACC+TGG | 0.477513 | 1_4:-57463718 | Msa0172410:CDS |
| CCAGTGTATACTGTGCTACC+TGG | 0.477513 | 1_4:-57471781 | Msa0172410:CDS |
| TCAAATTGATACCAATGGAC+AGG | 0.479120 | 1_4:-57471085 | Msa0172410:CDS |
| AAATACTGCAACTGGAGCTC+AGG | 0.488941 | 1_4:-57461143 | Msa0172410:CDS |
| ATCTAAGTCCAGTCCACCAT+TGG | 0.492671 | 1_4:+57461093 | None:intergenic |
| TGATATTCTGAGGGTTGTAA+AGG | 0.493786 | 1_4:+57471822 | None:intergenic |
| CGCCAATGGTGGATTAGACT+TGG | 0.495624 | 1_4:-57471124 | Msa0172410:CDS |
| CTAATCCACCATTGGCGCAC+TGG | 0.495852 | 1_4:+57471130 | None:intergenic |
| TCAAATTGATACCAATGGAC+AGG | 0.496103 | 1_4:-57461056 | Msa0172410:CDS |
| GTCTTGTGGCAAGTGCTTGA+GGG | 0.497781 | 1_4:-57471678 | Msa0172410:intron |
| TGCTACGCCATGACAAGGGC+TGG | 0.498360 | 1_4:+57463687 | None:intergenic |
| CAAAGACATAGTTAACTGTA+AGG | 0.501363 | 1_4:+57471046 | None:intergenic |
| CCAGTGCTCCAATGGTGGAC+TGG | 0.503700 | 1_4:-57461101 | Msa0172410:CDS |
| CCAGTCCACCATTGGAGCAC+TGG | 0.503905 | 1_4:+57461101 | None:intergenic |
| TAATCCCAATTGATATTCTG+AGG | 0.515116 | 1_4:+57471812 | None:intergenic |
| AGTCTTGTGGCAAGTGCTTG+AGG | 0.518693 | 1_4:-57471679 | Msa0172410:CDS |
| CCGCAAGAATCTCTGCCTGT+TGG | 0.525418 | 1_4:+57463629 | None:intergenic |
| TGGCCCAGCTGGTCCACAAA+AGG | 0.525504 | 1_4:+57463649 | None:intergenic |
| ATTCTGAACGCCCTGTCCAT+TGG | 0.534339 | 1_4:+57461045 | None:intergenic |
| TTCAATCAAATTGATACCAA+TGG | 0.541175 | 1_4:-57461061 | Msa0172410:CDS |
| TTCAATCAAATTGATACCAA+TGG | 0.541175 | 1_4:-57471090 | Msa0172410:CDS |
| TAATCCCAGTTAATATTCTG+AGG | 0.543703 | 1_4:+57463749 | None:intergenic |
| TGTGTTTCATTGTAGAAGCA+TGG | 0.545187 | 1_4:+57471962 | None:intergenic |
| CTTCTGGTAACCCTGTCCAT+TGG | 0.545362 | 1_4:+57471074 | None:intergenic |
| GTGAATGGTCAGAGTGCAAA+CGG | 0.554003 | 1_4:-57471863 | Msa0172410:CDS |
| TCAGAGTGCAAACAATGTTA+GGG | 0.559123 | 1_4:-57463792 | Msa0172410:intron |
| TCAGGTAACGGTGAGAATAG+TGG | 0.560842 | 1_4:-57461125 | Msa0172410:CDS |
| TTTACGTGTATGGTTATGCA+AGG | 0.562116 | 1_4:+57460216 | None:intergenic |
| ATCCAAGTCTAATCCACCAT+TGG | 0.563000 | 1_4:+57471122 | None:intergenic |
| AATGGACAGGGCGTTCAGAA+TGG | 0.563067 | 1_4:-57461043 | Msa0172410:CDS |
| AATGGACAGGGTTACCAGAA+GGG | 0.563174 | 1_4:-57471072 | Msa0172410:CDS |
| ATAGTGGACCAGTGCGCCAA+TGG | 0.565572 | 1_4:-57471138 | Msa0172410:CDS |
| ATAGTGGACCAGTGCTCCAA+TGG | 0.570594 | 1_4:-57461109 | Msa0172410:CDS |
| TATTCTGAGGGTTGTAAAGG+TGG | 0.575623 | 1_4:+57471825 | None:intergenic |
| ATGCAAACCAGCCCTTGTCA+TGG | 0.583448 | 1_4:-57463694 | Msa0172410:CDS |
| ATATTTGCTACGCCATGACA+AGG | 0.584472 | 1_4:+57463682 | None:intergenic |
| GTGGACCAGTGCGCCAATGG+TGG | 0.584793 | 1_4:-57471135 | Msa0172410:CDS |
| CAAATTGATACCAATGGACA+GGG | 0.591064 | 1_4:-57471084 | Msa0172410:CDS |
| AATCCCAATTGATATTCTGA+GGG | 0.597982 | 1_4:+57471813 | None:intergenic |
| TCAAGTAACAGTGAGAATAG+TGG | 0.598835 | 1_4:-57471154 | Msa0172410:CDS |
| CAGTGTATACTGTGCTACCT+GGG | 0.602353 | 1_4:-57463717 | Msa0172410:CDS |
| CAGTGTATACTGTGCTACCT+GGG | 0.602353 | 1_4:-57471780 | Msa0172410:CDS |
| AATCCCAGTTAATATTCTGA+GGG | 0.602743 | 1_4:+57463750 | None:intergenic |
| TGCAACTGGAGCTCAGGTAA+CGG | 0.602926 | 1_4:-57461137 | Msa0172410:CDS |
| CATGGCGTAGCAAATATGGT+TGG | 0.604474 | 1_4:-57463676 | Msa0172410:CDS |
| CAAATTGATACCAATGGACA+GGG | 0.605839 | 1_4:-57461055 | Msa0172410:CDS |
| ATGCAAACCAGTCCTTGGAA+TGG | 0.612020 | 1_4:-57471757 | Msa0172410:CDS |
| CAATGGACAGGGTTACCAGA+AGG | 0.617429 | 1_4:-57471073 | Msa0172410:CDS |
| GTGGACCAGTGCTCCAATGG+TGG | 0.625188 | 1_4:-57461106 | Msa0172410:CDS |
| TGTGGACCCCAGGGCCCTCG+TGG | 0.633299 | 1_4:-57471707 | Msa0172410:CDS |
| TAACCCTCAGAATATTAACT+GGG | 0.635981 | 1_4:-57463753 | Msa0172410:CDS |
| ACGTGTATGGTTATGCAAGG+TGG | 0.649111 | 1_4:+57460219 | None:intergenic |
| GTGGGAACGATGTTAGTGAA+TGG | 0.656794 | 1_4:-57471878 | Msa0172410:CDS |
| TCTCTACCACGAGGGCCCTG+GGG | 0.658114 | 1_4:+57471701 | None:intergenic |
| TATTTGCTACGCCATGACAA+GGG | 0.664421 | 1_4:+57463683 | None:intergenic |
| CCAACAGGCAGAGATTCTTG+CGG | 0.667208 | 1_4:-57463629 | Msa0172410:CDS |
| TCACTAACATCGTTCCCACA+AGG | 0.670804 | 1_4:+57471882 | None:intergenic |
| CCAGGTAGCACAGTATACAC+TGG | 0.672657 | 1_4:+57463718 | None:intergenic |
| CCAGGTAGCACAGTATACAC+TGG | 0.672657 | 1_4:+57471781 | None:intergenic |
| CCTCGTGGTAGAGAGTCTTG+TGG | 0.684944 | 1_4:-57471692 | Msa0172410:CDS |
| CACAAGACTCTCTACCACGA+GGG | 0.694332 | 1_4:+57471693 | None:intergenic |
| CCACAAGACTCTCTACCACG+AGG | 0.710327 | 1_4:+57471692 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTATTATATAATT+GGG | + | chr1_4:57465784-57465803 | None:intergenic | 0.0% |
| !!! | AAATTTTTTTATTATATAAT+TGG | + | chr1_4:57465785-57465804 | None:intergenic | 0.0% |
| !!! | TAAAAAATATTAAAAAATTT+TGG | - | chr1_4:57465844-57465863 | Msa0172410:intron | 0.0% |
| !! | TTTATAACACATTTATAATT+AGG | - | chr1_4:57460811-57460830 | Msa0172410:intron | 10.0% |
| !!! | GTTTTATTTATTGTATTATT+AGG | + | chr1_4:57461255-57461274 | None:intergenic | 10.0% |
| !! | TCAAAATAAAAAAACTAATT+AGG | - | chr1_4:57461574-57461593 | Msa0172410:intron | 10.0% |
| !! | ATATAAATAGAATATATTAG+AGG | - | chr1_4:57462310-57462329 | Msa0172410:intron | 10.0% |
| !!! | TTGTCTTTTTTTTTATTTTA+TGG | - | chr1_4:57462899-57462918 | Msa0172410:intron | 10.0% |
| !!! | TTTTTTATTTTATGGTAATT+AGG | - | chr1_4:57462907-57462926 | Msa0172410:intron | 10.0% |
| !!! | TTTTTATTTTATGGTAATTA+GGG | - | chr1_4:57462908-57462927 | Msa0172410:intron | 10.0% |
| !!! | TTATTCAATATTTTTATTTG+AGG | + | chr1_4:57463356-57463375 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTGGATTAAATA+TGG | - | chr1_4:57465063-57465082 | Msa0172410:intron | 10.0% |
| !!! | AAAATATGATTTTATTTTGT+AGG | - | chr1_4:57465244-57465263 | Msa0172410:intron | 10.0% |
| !!! | AAATATGATTTTATTTTGTA+GGG | - | chr1_4:57465245-57465264 | Msa0172410:intron | 10.0% |
| !!! | ATATATATATTATTTTAGAC+CGG | + | chr1_4:57465378-57465397 | None:intergenic | 10.0% |
| !! | AAGTTATATAAAAAGTTAAA+TGG | - | chr1_4:57465597-57465616 | Msa0172410:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | - | chr1_4:57465688-57465707 | Msa0172410:intron | 10.0% |
| !!! | TTTATTAATTTTTCATTTTC+CGG | + | chr1_4:57467060-57467079 | None:intergenic | 10.0% |
| !! | AAAAAAATGAAAAAAAATTC+TGG | - | chr1_4:57465975-57465994 | Msa0172410:intron | 10.0% |
| !!! | ATTTTCATTAGTATTTTTTT+CGG | - | chr1_4:57466392-57466411 | Msa0172410:intron | 10.0% |
| !! | TAAAAATTATGAAAAAATTC+TGG | + | chr1_4:57466603-57466622 | None:intergenic | 10.0% |
| !! | TCTAAAAAAAATTAAAATTC+TGG | + | chr1_4:57466717-57466736 | None:intergenic | 10.0% |
| !! | ACATCTAATAAAAATATAAA+CGG | - | chr1_4:57467615-57467634 | Msa0172410:intron | 10.0% |
| !! | TTTCTTTCAAAAAAAAATTA+AGG | + | chr1_4:57468805-57468824 | None:intergenic | 10.0% |
| !! | TTTGAAAGAAAAAAAAAATA+AGG | - | chr1_4:57468814-57468833 | Msa0172410:intron | 10.0% |
| !!! | TAAAAATTAAGTTATTTTCT+TGG | - | chr1_4:57468873-57468892 | Msa0172410:intron | 10.0% |
| !! | AATTATATTTGTATAGTTTA+TGG | - | chr1_4:57469236-57469255 | Msa0172410:intron | 10.0% |
| !!! | TAAAATAATTATTTAGAATC+CGG | - | chr1_4:57470490-57470509 | Msa0172410:intron | 10.0% |
| !! | TTTAATTAGTAATAATATTG+TGG | - | chr1_4:57471029-57471048 | Msa0172410:intron | 10.0% |
| !!! | AATAAAATTAATTTGAAGTT+AGG | - | chr1_4:57471618-57471637 | Msa0172410:intron | 10.0% |
| !!! | TTTTATAAAATGAGTAAGTA+CGG | + | chr1_4:57460571-57460590 | None:intergenic | 15.0% |
| !! | AAATAACTAATTAAACAGTA+AGG | - | chr1_4:57461525-57461544 | Msa0172410:intron | 15.0% |
| !! | ATTATATCTACATATCTAAT+CGG | + | chr1_4:57461662-57461681 | None:intergenic | 15.0% |
| !! | ATGATGATTTATAATCAATT+AGG | - | chr1_4:57461687-57461706 | Msa0172410:intron | 15.0% |
| !!! | CCAATTTTTTCTTATATTTT+TGG | + | chr1_4:57462154-57462173 | None:intergenic | 15.0% |
| !! | CCAAAAATATAAGAAAAAAT+TGG | - | chr1_4:57462151-57462170 | Msa0172410:intron | 15.0% |
| !!! | ATCAATTTTTCCTTATATTT+TGG | - | chr1_4:57462232-57462251 | Msa0172410:intron | 15.0% |
| !!! | TCAATTTTTCCTTATATTTT+GGG | - | chr1_4:57462233-57462252 | Msa0172410:intron | 15.0% |
| !!! | AAAATATTTTAGCAAAACTT+GGG | - | chr1_4:57463928-57463947 | Msa0172410:intron | 15.0% |
| !!! | CTATTAAGTAATTTTTCAAT+AGG | - | chr1_4:57464337-57464356 | Msa0172410:intron | 15.0% |
| !! | GAGAATTTAAAAAATTATAG+TGG | + | chr1_4:57464668-57464687 | None:intergenic | 15.0% |
| !! | AATAAACCTTCAATTTAAAT+TGG | - | chr1_4:57464716-57464735 | Msa0172410:intron | 15.0% |
| !!! | TCATAGTTTTTTTTTTTTGA+AGG | - | chr1_4:57464991-57465010 | Msa0172410:intron | 15.0% |
| !!! | AAAGTAAGCATATAATTTTT+TGG | - | chr1_4:57465052-57465071 | Msa0172410:intron | 15.0% |
| !!! | GTTAAATGGTAATATTATTT+TGG | - | chr1_4:57465611-57465630 | Msa0172410:intron | 15.0% |
| !!! | ATATTATTTTGGCTTAAATA+TGG | - | chr1_4:57465622-57465641 | Msa0172410:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | chr1_4:57465686-57465705 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | chr1_4:57465687-57465706 | None:intergenic | 15.0% |
| !!! | AATAAAATTTCGAAATTTTC+TGG | - | chr1_4:57466152-57466171 | Msa0172410:intron | 15.0% |
| !! | TCTGGAAAAAATTAAAATTA+TGG | - | chr1_4:57466170-57466189 | Msa0172410:intron | 15.0% |
| !!! | CGAAATTTTAATAAAAATTC+TGG | - | chr1_4:57466207-57466226 | Msa0172410:intron | 15.0% |
| !! | TTTATTTCCAAAAAAATTTC+CGG | - | chr1_4:57466275-57466294 | Msa0172410:intron | 15.0% |
| !!! | TTTTCATTAGTATTTTTTTC+GGG | - | chr1_4:57466393-57466412 | Msa0172410:intron | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | - | chr1_4:57466417-57466436 | Msa0172410:intron | 15.0% |
| !! | TATTTATAAATCGAGAATAA+GGG | - | chr1_4:57466451-57466470 | Msa0172410:intron | 15.0% |
| !! | CGAAATTATAATAAAAATTC+TGG | + | chr1_4:57466655-57466674 | None:intergenic | 15.0% |
| !! | GGAAAAAAAATTAAAAATTC+TGG | + | chr1_4:57466836-57466855 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTTGC+AGG | - | chr1_4:57467104-57467123 | Msa0172410:intron | 15.0% |
| !! | CTATAAAAAAAAAATTTGCA+GGG | - | chr1_4:57467105-57467124 | Msa0172410:intron | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr1_4:57467165-57467184 | Msa0172410:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr1_4:57467166-57467185 | Msa0172410:intron | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | + | chr1_4:57467225-57467244 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | - | chr1_4:57467225-57467244 | Msa0172410:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | - | chr1_4:57467226-57467245 | Msa0172410:intron | 15.0% |
| !! | AAAAATAATAGGCTTAAATA+TGG | + | chr1_4:57467290-57467309 | None:intergenic | 15.0% |
| !! | ATATAACTTTATGATTTGAT+TGG | - | chr1_4:57467312-57467331 | Msa0172410:intron | 15.0% |
| !! | CATCTATTAAAAATTGTTAA+TGG | - | chr1_4:57467340-57467359 | Msa0172410:intron | 15.0% |
| !!! | TGGACATAATTTTATTATTT+CGG | - | chr1_4:57467391-57467410 | Msa0172410:intron | 15.0% |
| !!! | AATAGATTAATGAATTGTTT+TGG | - | chr1_4:57467429-57467448 | Msa0172410:intron | 15.0% |
| !!! | ATATTTTTATTAGATGTTGA+TGG | + | chr1_4:57467612-57467631 | None:intergenic | 15.0% |
| !!! | ATGTAGAAAATATTTAAGTT+GGG | + | chr1_4:57468005-57468024 | None:intergenic | 15.0% |
| !! | AATGTAGAAAATATTTAAGT+TGG | + | chr1_4:57468006-57468025 | None:intergenic | 15.0% |
| !!! | ATCTTTTTAGTAATATTTCT+AGG | + | chr1_4:57468048-57468067 | None:intergenic | 15.0% |
| !! | ATATTAGTTGATCATTTATA+AGG | - | chr1_4:57468765-57468784 | Msa0172410:intron | 15.0% |
| !! | TTCAAAAAAAAATTAAGGAT+AGG | + | chr1_4:57468800-57468819 | None:intergenic | 15.0% |
| !! | CATTATATTTATAATGGTTT+AGG | + | chr1_4:57469059-57469078 | None:intergenic | 15.0% |
| !! | ACTACTCATTATATTTATAA+TGG | + | chr1_4:57469065-57469084 | None:intergenic | 15.0% |
| !!! | ATGTGAGATATTATTTTTTT+AGG | - | chr1_4:57469561-57469580 | Msa0172410:intron | 15.0% |
| !! | TTAAATATATATAGTTCAGA+TGG | - | chr1_4:57469814-57469833 | Msa0172410:intron | 15.0% |
| !! | AAACTATCATTGATATTTAA+AGG | + | chr1_4:57470191-57470210 | None:intergenic | 15.0% |
| !! | TATAAAAAATTATCAAACTG+TGG | + | chr1_4:57470472-57470491 | None:intergenic | 15.0% |
| !!! | AAATTTCTACTTTTAGTTTT+AGG | - | chr1_4:57470885-57470904 | Msa0172410:intron | 15.0% |
| !!! | AGTTTTATTTATGGTATTTA+AGG | + | chr1_4:57471315-57471334 | None:intergenic | 15.0% |
| !!! | TAATTATCCATTTTTTTTCT+AGG | - | chr1_4:57471972-57471991 | Msa0172410:five_prime_UTR | 15.0% |
| !! | ACCTAAACACATTTATAATT+GGG | - | chr1_4:57460734-57460753 | Msa0172410:intron | 20.0% |
| !! | GATAGTTGAATTAATATTAG+TGG | - | chr1_4:57461007-57461026 | Msa0172410:intron | 20.0% |
| !! | TCTAATCGAATTATATAAAG+AGG | + | chr1_4:57461487-57461506 | None:intergenic | 20.0% |
| !! | AATTAGGCATGTAATATAAT+CGG | - | chr1_4:57461703-57461722 | Msa0172410:intron | 20.0% |
| !!! | GATAATTATTGTTGATGATA+TGG | - | chr1_4:57462056-57462075 | Msa0172410:intron | 20.0% |
| !! | ATAGAATATATTAGAGGTTA+TGG | - | chr1_4:57462316-57462335 | Msa0172410:intron | 20.0% |
| !! | CTTGATAAAATCTAAATAGA+AGG | - | chr1_4:57462339-57462358 | Msa0172410:intron | 20.0% |
| !! | TGATGATAATCGTATTTATA+AGG | - | chr1_4:57462547-57462566 | Msa0172410:intron | 20.0% |
| !!! | TTTTTTGTCAAGTAATCTAA+TGG | - | chr1_4:57462715-57462734 | Msa0172410:intron | 20.0% |
| !!! | CTATTCTAAAAGTTATTATG+TGG | - | chr1_4:57462857-57462876 | Msa0172410:intron | 20.0% |
| !!! | TATTTTTATTTGAGGAGAAA+TGG | + | chr1_4:57463348-57463367 | None:intergenic | 20.0% |
| !!! | CAAGTTTTGCTAAAATATTT+TGG | + | chr1_4:57463929-57463948 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGCAAAACT+TGG | - | chr1_4:57463927-57463946 | Msa0172410:intron | 20.0% |
| !!! | AAATATTTTAGCAAAACTTG+GGG | - | chr1_4:57463929-57463948 | Msa0172410:intron | 20.0% |
| !! | ATTAGTAGTGTTTATATAGT+GGG | + | chr1_4:57464082-57464101 | None:intergenic | 20.0% |
| !! | AAAATGTTAATCTCTTCAAT+AGG | - | chr1_4:57464378-57464397 | Msa0172410:intron | 20.0% |
| !!! | AAAGATGAAAGCTTAATTTT+AGG | - | chr1_4:57464464-57464483 | Msa0172410:intron | 20.0% |
| !!! | AAGATGAAAGCTTAATTTTA+GGG | - | chr1_4:57464465-57464484 | Msa0172410:intron | 20.0% |
| !! | ATAAAACACTCTTACAAATA+AGG | + | chr1_4:57464527-57464546 | None:intergenic | 20.0% |
| !! | TTATTATGAAGACATTTGAA+AGG | - | chr1_4:57464605-57464624 | Msa0172410:intron | 20.0% |
| !! | TATAGAGATTTAATTATAGC+AGG | - | chr1_4:57464692-57464711 | Msa0172410:intron | 20.0% |
| !!! | ACTATCAATTTGTTTAATTG+AGG | - | chr1_4:57464828-57464847 | Msa0172410:intron | 20.0% |
| !! | ATAGATGTCATCTTATAATA+GGG | - | chr1_4:57464922-57464941 | Msa0172410:intron | 20.0% |
| !!! | TATTGATGGTTAATTTTACA+AGG | + | chr1_4:57465149-57465168 | None:intergenic | 20.0% |
| !!! | ATATTTTTCGTCAGTAATTT+TGG | - | chr1_4:57465184-57465203 | Msa0172410:intron | 20.0% |
| !!! | GATCAGACAATTATTTTTAA+GGG | + | chr1_4:57465464-57465483 | None:intergenic | 20.0% |
| !!! | AGATCAGACAATTATTTTTA+AGG | + | chr1_4:57465465-57465484 | None:intergenic | 20.0% |
| !! | TTATTTCCAAAAAAATTTCC+GGG | - | chr1_4:57466276-57466295 | Msa0172410:intron | 20.0% |
| !! | TTATAAATACACAAAATTCC+CGG | + | chr1_4:57466297-57466316 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | - | chr1_4:57466308-57466327 | Msa0172410:intron | 20.0% |
| !!! | TTTTTGTGTATTTATAAACC+GGG | - | chr1_4:57466418-57466437 | Msa0172410:intron | 20.0% |
| !! | GTATTTATAAATCGAGAATA+AGG | - | chr1_4:57466450-57466469 | Msa0172410:intron | 20.0% |
| !!! | AAAATTGTTAATGGATTCAT+TGG | - | chr1_4:57467349-57467368 | Msa0172410:intron | 20.0% |
| !! | TGCAATAAAACAATAAAACA+GGG | + | chr1_4:57467506-57467525 | None:intergenic | 20.0% |
| !! | CATAGAAATTATTGTTAATG+AGG | + | chr1_4:57467794-57467813 | None:intergenic | 20.0% |
| !!! | ATTAAACAAAAATGAGTTGA+AGG | + | chr1_4:57467965-57467984 | None:intergenic | 20.0% |
| !! | AACACAAAAAATTGAGAAAA+TGG | - | chr1_4:57468336-57468355 | Msa0172410:intron | 20.0% |
| !!! | ATTCTTTGTTAGTTTATTGA+AGG | + | chr1_4:57468701-57468720 | None:intergenic | 20.0% |
| !!! | AAAAAATAATTTGAGATGAG+TGG | + | chr1_4:57468851-57468870 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTAAATGATTTAG+CGG | - | chr1_4:57469148-57469167 | Msa0172410:intron | 20.0% |
| !!! | TATAGCAATGTTTTAAAATC+CGG | - | chr1_4:57469283-57469302 | Msa0172410:intron | 20.0% |
| !!! | TGACTTTTTTTATTAAGACT+GGG | + | chr1_4:57469394-57469413 | None:intergenic | 20.0% |
| !!! | ATGACTTTTTTTATTAAGAC+TGG | + | chr1_4:57469395-57469414 | None:intergenic | 20.0% |
| !! | AAAAAAAATTATTCAATGCG+AGG | + | chr1_4:57470062-57470081 | None:intergenic | 20.0% |
| !!! | AACAGAGATTCTTTTATTTT+GGG | - | chr1_4:57470737-57470756 | Msa0172410:intron | 20.0% |
| !!! | TTTATTTTGGGTTTTCTTTA+TGG | - | chr1_4:57470749-57470768 | Msa0172410:intron | 20.0% |
| !!! | TTTTAATGTGAAACTCTTAA+CGG | - | chr1_4:57471877-57471896 | Msa0172410:CDS | 20.0% |
| ! | AACACACAAAAAAGAGAAAA+TGG | - | chr1_4:57460273-57460292 | Msa0172410:intron | 25.0% |
| ! | GACCTAAACACATTTATAAT+TGG | - | chr1_4:57460733-57460752 | Msa0172410:intron | 25.0% |
| ! | ACCCAATTATAAATGTGTTT+AGG | + | chr1_4:57460738-57460757 | None:intergenic | 25.0% |
| !!! | ATCTCTATGAGATTTTTTGT+CGG | - | chr1_4:57460923-57460942 | Msa0172410:intron | 25.0% |
| !!! | ATTCAATTCAGTTTTAGTCA+AGG | - | chr1_4:57460962-57460981 | Msa0172410:intron | 25.0% |
| ! | TTCAATCAAATTGATACCAA+TGG | - | chr1_4:57461128-57461147 | Msa0172410:CDS | 25.0% |
| !!! | TACTATATAACTTGCTATTG+TGG | - | chr1_4:57461339-57461358 | Msa0172410:intron | 25.0% |
| ! | AAAGAAGTAAATTCGATGTT+AGG | - | chr1_4:57461380-57461399 | Msa0172410:intron | 25.0% |
| !! | CTTAATTTTAAGCGTTTTGT+CGG | - | chr1_4:57461432-57461451 | Msa0172410:intron | 25.0% |
| ! | AACAGTAAGGTTAACTAATT+AGG | - | chr1_4:57461538-57461557 | Msa0172410:intron | 25.0% |
| !!! | AGTAATTAATGAGTTTTGAG+AGG | - | chr1_4:57461759-57461778 | Msa0172410:intron | 25.0% |
| !!! | GTAATTAATGAGTTTTGAGA+GGG | - | chr1_4:57461760-57461779 | Msa0172410:intron | 25.0% |
| ! | AAGTTACTAACTAAGTTACA+TGG | - | chr1_4:57461873-57461892 | Msa0172410:intron | 25.0% |
| ! | AGTTACTAACTAAGTTACAT+GGG | - | chr1_4:57461874-57461893 | Msa0172410:intron | 25.0% |
| ! | TCAACGAAAGTTAATGTATT+TGG | - | chr1_4:57462174-57462193 | Msa0172410:intron | 25.0% |
| ! | TCAACAAAAGCTAATGTATT+TGG | + | chr1_4:57462213-57462232 | None:intergenic | 25.0% |
| !!! | TTTTTCCTTATATTTTGGGA+CGG | - | chr1_4:57462237-57462256 | Msa0172410:intron | 25.0% |
| !!! | TTGAATGTGACTTTTTTTGT+TGG | - | chr1_4:57462501-57462520 | Msa0172410:intron | 25.0% |
| !!! | AAATTATGTCCTGTTGTTTT+TGG | - | chr1_4:57462932-57462951 | Msa0172410:intron | 25.0% |
| ! | CTTCAGTAGATAATAGAATT+TGG | + | chr1_4:57462984-57463003 | None:intergenic | 25.0% |
| ! | ATACTGAAACCACTTTAATA+TGG | - | chr1_4:57463203-57463222 | Msa0172410:intron | 25.0% |
| ! | GTAACAATACCATATTAAAG+TGG | + | chr1_4:57463215-57463234 | None:intergenic | 25.0% |
| !! | TTGATACTTTGGAGAAATTA+AGG | + | chr1_4:57463290-57463309 | None:intergenic | 25.0% |
| !! | ATTTCTCCAAAGTATCAATA+TGG | - | chr1_4:57463292-57463311 | Msa0172410:intron | 25.0% |
| ! | GACATTGTTTATTCCAAATA+GGG | - | chr1_4:57463414-57463433 | Msa0172410:intron | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | - | chr1_4:57463760-57463779 | Msa0172410:CDS | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | - | chr1_4:57463761-57463780 | Msa0172410:CDS | 25.0% |
| ! | ACAAGTAATATGAGAAACTT+TGG | - | chr1_4:57463785-57463804 | Msa0172410:CDS | 25.0% |
| ! | CAAGTAATATGAGAAACTTT+GGG | - | chr1_4:57463786-57463805 | Msa0172410:CDS | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+GGG | + | chr1_4:57464081-57464100 | None:intergenic | 25.0% |
| ! | CATTAGTAGTGTTTATATAG+TGG | + | chr1_4:57464083-57464102 | None:intergenic | 25.0% |
| !!! | TAAGTAATTTTTCAATAGGC+TGG | - | chr1_4:57464341-57464360 | Msa0172410:intron | 25.0% |
| !! | AGATGAAAGCTTAATTTTAG+GGG | - | chr1_4:57464466-57464485 | Msa0172410:intron | 25.0% |
| !!! | TGTAAGAGTGTTTTATAGAA+AGG | - | chr1_4:57464531-57464550 | Msa0172410:intron | 25.0% |
| !!! | GTAAGAGTGTTTTATAGAAA+GGG | - | chr1_4:57464532-57464551 | Msa0172410:intron | 25.0% |
| !!! | ATTATAGTGGAAGAAGATTT+TGG | + | chr1_4:57464655-57464674 | None:intergenic | 25.0% |
| ! | TAGTCTCCAATTTAAATTGA+AGG | + | chr1_4:57464725-57464744 | None:intergenic | 25.0% |
| !! | GTTTAATTTATGCTGTTACT+AGG | + | chr1_4:57464886-57464905 | None:intergenic | 25.0% |
| ! | AACAGCATAAATTAAACAAG+TGG | - | chr1_4:57464889-57464908 | Msa0172410:intron | 25.0% |
| ! | GATAGATGTCATCTTATAAT+AGG | - | chr1_4:57464921-57464940 | Msa0172410:intron | 25.0% |
| ! | TAGATGTCATCTTATAATAG+GGG | - | chr1_4:57464923-57464942 | Msa0172410:intron | 25.0% |
| ! | TACTGACGAAAAATATTACA+GGG | + | chr1_4:57465180-57465199 | None:intergenic | 25.0% |
| ! | TTACTGACGAAAAATATTAC+AGG | + | chr1_4:57465181-57465200 | None:intergenic | 25.0% |
| ! | AGTTTAGAGGAAACAAATTA+GGG | + | chr1_4:57465318-57465337 | None:intergenic | 25.0% |
| ! | AAGTTTAGAGGAAACAAATT+AGG | + | chr1_4:57465319-57465338 | None:intergenic | 25.0% |
| ! | AATGATATGCTTAAGTTTAG+AGG | + | chr1_4:57465331-57465350 | None:intergenic | 25.0% |
| !!! | CACAAACCTTATAGTTTTAT+GGG | + | chr1_4:57465497-57465516 | None:intergenic | 25.0% |
| !!! | ACACAAACCTTATAGTTTTA+TGG | + | chr1_4:57465498-57465517 | None:intergenic | 25.0% |
| !!! | TTTTGGCTTAAATATGGTAT+TGG | - | chr1_4:57465628-57465647 | Msa0172410:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | + | chr1_4:57465747-57465766 | None:intergenic | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | + | chr1_4:57465748-57465767 | None:intergenic | 25.0% |
| ! | TTATTATATAATTGGGGTCA+GGG | + | chr1_4:57465777-57465796 | None:intergenic | 25.0% |
| ! | TTTATTATATAATTGGGGTC+AGG | + | chr1_4:57465778-57465797 | None:intergenic | 25.0% |
| !!! | AAAATTCCCGGAAATTTTTT+TGG | + | chr1_4:57466285-57466304 | None:intergenic | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | - | chr1_4:57466307-57466326 | Msa0172410:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | + | chr1_4:57466321-57466340 | None:intergenic | 25.0% |
| ! | TATAAATACACAAAAGTTCC+CGG | + | chr1_4:57466439-57466458 | None:intergenic | 25.0% |
| !!! | AAAACTTACCTATTTTTGCA+GGG | - | chr1_4:57467198-57467217 | Msa0172410:intron | 25.0% |
| ! | AATAGGCTTAAATATGGTAT+TGG | + | chr1_4:57467284-57467303 | None:intergenic | 25.0% |
| !!! | ATTGGATTTTTTGCATGATT+AGG | - | chr1_4:57467367-57467386 | Msa0172410:intron | 25.0% |
| ! | CTGCAATAAAACAATAAAAC+AGG | + | chr1_4:57467507-57467526 | None:intergenic | 25.0% |
| !!! | CTGTTTTATTGTTTTATTGC+AGG | - | chr1_4:57467505-57467524 | Msa0172410:intron | 25.0% |
| !! | AAATTGATTCCTTCATCAAT+GGG | - | chr1_4:57467540-57467559 | Msa0172410:intron | 25.0% |
| ! | TCAACAAATGATAGTTTCAT+AGG | + | chr1_4:57467570-57467589 | None:intergenic | 25.0% |
| ! | TACCTGAAATATTCTCTTTA+CGG | + | chr1_4:57467671-57467690 | None:intergenic | 25.0% |
| !!! | TGATTCATATTGCCATTTTA+AGG | - | chr1_4:57467833-57467852 | Msa0172410:intron | 25.0% |
| ! | AATTAGGAAAGTCCTTAAAA+TGG | + | chr1_4:57467848-57467867 | None:intergenic | 25.0% |
| !! | TCTAAAAGTGCGTATTAATT+AGG | + | chr1_4:57467864-57467883 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGGGTAATTCAAT+TGG | + | chr1_4:57467993-57468012 | None:intergenic | 25.0% |
| !! | TGTTCTAGATTAATATTACG+AGG | - | chr1_4:57468110-57468129 | Msa0172410:intron | 25.0% |
| !!! | TTTTTTGTGTTTCATTGTAG+AGG | + | chr1_4:57468327-57468346 | None:intergenic | 25.0% |
| !!! | TTAAGTTATTTTCTTGGTTG+CGG | - | chr1_4:57468879-57468898 | Msa0172410:intron | 25.0% |
| ! | AATATCACTCTTCTCAATTT+AGG | - | chr1_4:57469032-57469051 | Msa0172410:intron | 25.0% |
| ! | TTCATTACAACATTTGTCTA+GGG | + | chr1_4:57470114-57470133 | None:intergenic | 25.0% |
| ! | ATTCATTACAACATTTGTCT+AGG | + | chr1_4:57470115-57470134 | None:intergenic | 25.0% |
| ! | CAAAATAAAAGAATCTCTGT+TGG | + | chr1_4:57470738-57470757 | None:intergenic | 25.0% |
| !!! | CAACAGAGATTCTTTTATTT+TGG | - | chr1_4:57470736-57470755 | Msa0172410:intron | 25.0% |
| ! | TTCAATCAAATTGATACCAA+TGG | - | chr1_4:57461128-57461147 | Msa0172410:CDS | 25.0% |
| !!! | AACTATAGCTTTGTTAATTG+CGG | - | chr1_4:57471211-57471230 | Msa0172410:intron | 25.0% |
| !!! | AACTTTGAAATTATGTTCCT+CGG | + | chr1_4:57471708-57471727 | None:intergenic | 25.0% |
| !!! | AATAAGGAAGATTGATAATG+TGG | - | chr1_4:57471920-57471939 | Msa0172410:CDS | 25.0% |
| !! | TGGTTTTCCTAGAAAAAAAA+TGG | + | chr1_4:57471982-57472001 | None:intergenic | 25.0% |
| AATCCCAATTGATATTCTGA+GGG | + | chr1_4:57460408-57460427 | None:intergenic | 30.0% | |
| TAATCCCAATTGATATTCTG+AGG | + | chr1_4:57460409-57460428 | None:intergenic | 30.0% | |
| ! | ATTGGGTCATAAATCGTTTT+CGG | - | chr1_4:57460751-57460770 | Msa0172410:intron | 30.0% |
| ! | ATTAGGTCATAAACCGTTTT+CGG | - | chr1_4:57460828-57460847 | Msa0172410:intron | 30.0% |
| !!! | TCTCTATGAGATTTTTTGTC+GGG | - | chr1_4:57460924-57460943 | Msa0172410:intron | 30.0% |
| ! | AATATTAGTGGTGATGATAC+AGG | - | chr1_4:57461019-57461038 | Msa0172410:intron | 30.0% |
| CAAAGACATAGTTAACTGTA+AGG | + | chr1_4:57461175-57461194 | None:intergenic | 30.0% | |
| !! | ACTTGCTATTGTGGAATAAT+AGG | - | chr1_4:57461348-57461367 | Msa0172410:intron | 30.0% |
| !! | CTTGCTATTGTGGAATAATA+GGG | - | chr1_4:57461349-57461368 | Msa0172410:intron | 30.0% |
| ! | TTGCTATTGTGGAATAATAG+GGG | - | chr1_4:57461350-57461369 | Msa0172410:intron | 30.0% |
| !! | AAGTGTTAGCTTGTTCTATT+AGG | - | chr1_4:57461623-57461642 | Msa0172410:intron | 30.0% |
| !!! | CTAGTAATTTTTTTCCGCAT+CGG | + | chr1_4:57462037-57462056 | None:intergenic | 30.0% |
| ATGCACGTGCATATAAATAT+AGG | + | chr1_4:57462288-57462307 | None:intergenic | 30.0% | |
| ATAGATTAAGAAGTCGTACA+CGG | + | chr1_4:57462841-57462860 | None:intergenic | 30.0% | |
| GACAAAATTACGAGACAATT+TGG | + | chr1_4:57462884-57462903 | None:intergenic | 30.0% | |
| TTTGGAAATCCAAAAACAAC+AGG | + | chr1_4:57462944-57462963 | None:intergenic | 30.0% | |
| GATTTCCAAACTGTTGTATT+TGG | - | chr1_4:57462954-57462973 | Msa0172410:intron | 30.0% | |
| GAAATCCAAATACAACAGTT+TGG | + | chr1_4:57462962-57462981 | None:intergenic | 30.0% | |
| TATCTACTGAAGTTGTTACT+AGG | - | chr1_4:57462992-57463011 | Msa0172410:intron | 30.0% | |
| ! | AGTCTACCTTGCATAATTTT+GGG | + | chr1_4:57463064-57463083 | None:intergenic | 30.0% |
| ! | TAGTCTACCTTGCATAATTT+TGG | + | chr1_4:57463065-57463084 | None:intergenic | 30.0% |
| GAGAATTACACCTTCAAATA+TGG | - | chr1_4:57463162-57463181 | Msa0172410:intron | 30.0% | |
| GTATTGTTACCACTCTATTA+TGG | - | chr1_4:57463225-57463244 | Msa0172410:intron | 30.0% | |
| AGAAATTAAGGTTAGAATGG+TGG | + | chr1_4:57463278-57463297 | None:intergenic | 30.0% | |
| TGGAGAAATTAAGGTTAGAA+TGG | + | chr1_4:57463281-57463300 | None:intergenic | 30.0% | |
| !! | TTTTATTTGAGGAGAAATGG+TGG | + | chr1_4:57463345-57463364 | None:intergenic | 30.0% |
| GGAATCAAGAATGATCTTAA+CGG | + | chr1_4:57463389-57463408 | None:intergenic | 30.0% | |
| GGACATTGTTTATTCCAAAT+AGG | - | chr1_4:57463413-57463432 | Msa0172410:intron | 30.0% | |
| TTAAGATCATAGTCCCTATT+TGG | + | chr1_4:57463430-57463449 | None:intergenic | 30.0% | |
| TTCGATAATATATGTCCCTT+CGG | + | chr1_4:57463467-57463486 | None:intergenic | 30.0% | |
| AAGGGACATATATTATCGAA+GGG | - | chr1_4:57463467-57463486 | Msa0172410:intron | 30.0% | |
| ! | AAAGAGTTTCATTGAGTTGT+CGG | + | chr1_4:57463691-57463710 | None:intergenic | 30.0% |
| TAGTAGTGTTTATATAGTGG+GGG | + | chr1_4:57464080-57464099 | None:intergenic | 30.0% | |
| TAAACACAAATTCCCATGAT+GGG | + | chr1_4:57464165-57464184 | None:intergenic | 30.0% | |
| ! | GGTCACTAATAAGTTTTACT+CGG | - | chr1_4:57464417-57464436 | Msa0172410:intron | 30.0% |
| ! | GTCACTAATAAGTTTTACTC+GGG | - | chr1_4:57464418-57464437 | Msa0172410:intron | 30.0% |
| ! | GATGAAAGCTTAATTTTAGG+GGG | - | chr1_4:57464467-57464486 | Msa0172410:intron | 30.0% |
| TTGACAATTGAGACTATGTT+TGG | + | chr1_4:57464809-57464828 | None:intergenic | 30.0% | |
| TAATTGAGGTGATTCATTAG+TGG | - | chr1_4:57464842-57464861 | Msa0172410:intron | 30.0% | |
| ATTAAACAAGTGGTGCTTAA+TGG | - | chr1_4:57464899-57464918 | Msa0172410:intron | 30.0% | |
| ACAGGGATTGAAAATATTGA+TGG | + | chr1_4:57465163-57465182 | None:intergenic | 30.0% | |
| TTCACACCCATAAAACTATA+AGG | - | chr1_4:57465488-57465507 | Msa0172410:intron | 30.0% | |
| ! | CAAAACTGACCTATTTTACA+GGG | + | chr1_4:57465655-57465674 | None:intergenic | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr1_4:57465715-57465734 | None:intergenic | 30.0% |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | - | chr1_4:57465744-57465763 | Msa0172410:intron | 30.0% |
| TGTATTTATAAACCGAGCTT+AGG | - | chr1_4:57466341-57466360 | Msa0172410:intron | 30.0% | |
| ATACACAAAAAACCTAAGCT+CGG | + | chr1_4:57466356-57466375 | None:intergenic | 30.0% | |
| !! | ATTTTCCCAGTATTTTTGCA+AGG | - | chr1_4:57467074-57467093 | Msa0172410:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCT+GGG | - | chr1_4:57467137-57467156 | Msa0172410:intron | 30.0% |
| ! | TTTTTGATCCCAGCAAAAAT+AGG | + | chr1_4:57467148-57467167 | None:intergenic | 30.0% |
| ! | CTGCAAAAATAGGTAAGTTT+TGG | + | chr1_4:57467199-57467218 | None:intergenic | 30.0% |
| !!! | CAAAACTTACCTATTTTTGC+AGG | - | chr1_4:57467197-57467216 | Msa0172410:intron | 30.0% |
| !!! | GATTTTTTGCATGATTAGGA+TGG | - | chr1_4:57467371-57467390 | Msa0172410:intron | 30.0% |
| ! | GAAATTGATTCCTTCATCAA+TGG | - | chr1_4:57467539-57467558 | Msa0172410:intron | 30.0% |
| TACGGAGAAGATTTATTGTA+GGG | + | chr1_4:57467653-57467672 | None:intergenic | 30.0% | |
| TTACGGAGAAGATTTATTGT+AGG | + | chr1_4:57467654-57467673 | None:intergenic | 30.0% | |
| TGAAGAAGACAAATCAAACT+AGG | - | chr1_4:57468076-57468095 | Msa0172410:intron | 30.0% | |
| AAGCAAAATAAAGACAAGCA+TGG | - | chr1_4:57468187-57468206 | Msa0172410:intron | 30.0% | |
| AATAAAGACAAGCATGGTAA+CGG | - | chr1_4:57468193-57468212 | Msa0172410:intron | 30.0% | |
| TGTGTGCAAATATATAGACT+TGG | + | chr1_4:57468302-57468321 | None:intergenic | 30.0% | |
| ATAACCCTCAGAATATTAAC+TGG | - | chr1_4:57468464-57468483 | Msa0172410:intron | 30.0% | |
| TAACCCTCAGAATATTAACT+GGG | - | chr1_4:57468465-57468484 | Msa0172410:intron | 30.0% | |
| AATCCCAGTTAATATTCTGA+GGG | + | chr1_4:57468471-57468490 | None:intergenic | 30.0% | |
| TAATCCCAGTTAATATTCTG+AGG | + | chr1_4:57468472-57468491 | None:intergenic | 30.0% | |
| !! | TTTCTCTAAAATGAGAGAAG+TGG | + | chr1_4:57468634-57468653 | None:intergenic | 30.0% |
| TATTGTTAACACTTACCAGT+TGG | + | chr1_4:57469865-57469884 | None:intergenic | 30.0% | |
| AAAATTATTCAATGCGAGGA+CGG | + | chr1_4:57470058-57470077 | None:intergenic | 30.0% | |
| TGTTAAATTGAGCATATTGC+TGG | + | chr1_4:57470141-57470160 | None:intergenic | 30.0% | |
| ! | GTAATTTTCTGCATTCTAGA+CGG | - | chr1_4:57470260-57470279 | Msa0172410:intron | 30.0% |
| ! | TAATTTTCTGCATTCTAGAC+GGG | - | chr1_4:57470261-57470280 | Msa0172410:intron | 30.0% |
| CGATTTCAAAACATGGATAT+GGG | + | chr1_4:57470332-57470351 | None:intergenic | 30.0% | |
| !!! | CCATATCCATGTTTTGAAAT+CGG | - | chr1_4:57470330-57470349 | Msa0172410:intron | 30.0% |
| !!! | CATATCCATGTTTTGAAATC+GGG | - | chr1_4:57470331-57470350 | Msa0172410:intron | 30.0% |
| !!! | ATATCCATGTTTTGAAATCG+GGG | - | chr1_4:57470332-57470351 | Msa0172410:intron | 30.0% |
| !!! | AGGTTTTTTCCATTTTGACT+GGG | + | chr1_4:57470360-57470379 | None:intergenic | 30.0% |
| ATGGAAAAAACCTGTCAAAT+TGG | - | chr1_4:57470367-57470386 | Msa0172410:intron | 30.0% | |
| TGGAAAAAACCTGTCAAATT+GGG | - | chr1_4:57470368-57470387 | Msa0172410:intron | 30.0% | |
| ! | TAATTATTTAGAATCCGGTC+CGG | - | chr1_4:57470495-57470514 | Msa0172410:intron | 30.0% |
| !!! | TAAAGCAGTGTTTTAAAACC+CGG | + | chr1_4:57470677-57470696 | None:intergenic | 30.0% |
| !!! | ACATGTGTTTTTTTGAGTAC+AGG | - | chr1_4:57470915-57470934 | Msa0172410:intron | 30.0% |
| CAAAGCTATAGTTAACTGTA+AGG | + | chr1_4:57471204-57471223 | None:intergenic | 30.0% | |
| !!! | GCGCTCATTAGTTTTATTTA+TGG | + | chr1_4:57471324-57471343 | None:intergenic | 30.0% |
| GATATAATGTTACGTGACAT+TGG | + | chr1_4:57471559-57471578 | None:intergenic | 30.0% | |
| ATAGCTTAAACACAAGTTCA+TGG | + | chr1_4:57471852-57471871 | None:intergenic | 30.0% | |
| CAGCTGAAATGATGATAATA+AGG | - | chr1_4:57471904-57471923 | Msa0172410:CDS | 30.0% | |
| TGTGTTTCATTGTAGAAGCA+TGG | + | chr1_4:57460259-57460278 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTGTGTTTCCTTGT+GGG | - | chr1_4:57460322-57460341 | Msa0172410:intron | 35.0% |
| ! | TGATATTCTGAGGGTTGTAA+AGG | + | chr1_4:57460399-57460418 | None:intergenic | 35.0% |
| ACAACCCTCAGAATATCAAT+TGG | - | chr1_4:57460401-57460420 | Msa0172410:intron | 35.0% | |
| CAACCCTCAGAATATCAATT+GGG | - | chr1_4:57460402-57460421 | Msa0172410:intron | 35.0% | |
| !! | ATACTTTTTACGCCATTCCA+AGG | + | chr1_4:57460476-57460495 | None:intergenic | 35.0% |
| TTGGAATGGCGTAAAAAGTA+TGG | - | chr1_4:57460475-57460494 | Msa0172410:intron | 35.0% | |
| ! | AATGGCGTAAAAAGTATGGT+TGG | - | chr1_4:57460479-57460498 | Msa0172410:intron | 35.0% |
| TCATAGAAACAAGCCGAAAA+CGG | + | chr1_4:57460767-57460786 | None:intergenic | 35.0% | |
| !!! | CTCTATGAGATTTTTTGTCG+GGG | - | chr1_4:57460925-57460944 | Msa0172410:intron | 35.0% |
| !!! | TCTATGAGATTTTTTGTCGG+GGG | - | chr1_4:57460926-57460945 | Msa0172410:intron | 35.0% |
| TCAAGTAACAGTGAGAATAG+TGG | - | chr1_4:57461064-57461083 | Msa0172410:CDS | 35.0% | |
| TCAAATTGATACCAATGGAC+AGG | - | chr1_4:57461133-57461152 | Msa0172410:CDS | 35.0% | |
| CAAATTGATACCAATGGACA+GGG | - | chr1_4:57461134-57461153 | Msa0172410:CDS | 35.0% | |
| ! | TGTGGAATAATAGGGGATTT+TGG | - | chr1_4:57461357-57461376 | Msa0172410:intron | 35.0% |
| TAATTGATTACGCTTCTGCT+AGG | + | chr1_4:57461736-57461755 | None:intergenic | 35.0% | |
| TCATTCCAAAGACGTACTTA+GGG | - | chr1_4:57461914-57461933 | Msa0172410:intron | 35.0% | |
| ! | ATCGGTTTCCATTCTATCAA+TGG | + | chr1_4:57462019-57462038 | None:intergenic | 35.0% |
| AATAGAAGGCCAAGAATGTT+TGG | - | chr1_4:57462353-57462372 | Msa0172410:intron | 35.0% | |
| !! | TCACTTTGAGACTCAATTCA+TGG | - | chr1_4:57462476-57462495 | Msa0172410:intron | 35.0% |
| !! | CACTTTGAGACTCAATTCAT+GGG | - | chr1_4:57462477-57462496 | Msa0172410:intron | 35.0% |
| CATGTAATATGTAGTAGTCG+AGG | + | chr1_4:57462790-57462809 | None:intergenic | 35.0% | |
| TAGATTAAGAAGTCGTACAC+GGG | + | chr1_4:57462840-57462859 | None:intergenic | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | + | chr1_4:57463159-57463178 | None:intergenic | 35.0% |
| GGTCTTAGTACCATATTTGA+AGG | + | chr1_4:57463175-57463194 | None:intergenic | 35.0% | |
| GTGGTTTCAGTATTAAAGAG+TGG | + | chr1_4:57463196-57463215 | None:intergenic | 35.0% | |
| GTAGTGCCATATTGATACTT+TGG | + | chr1_4:57463301-57463320 | None:intergenic | 35.0% | |
| AAGATCATTCTTGATTCCGA+CGG | - | chr1_4:57463391-57463410 | Msa0172410:intron | 35.0% | |
| !! | AAAAGCACTCTTTATTCCGA+AGG | - | chr1_4:57463448-57463467 | Msa0172410:intron | 35.0% |
| ! | AAAGCACTCTTTATTCCGAA+GGG | - | chr1_4:57463449-57463468 | Msa0172410:intron | 35.0% |
| GAAGGGACATATATTATCGA+AGG | - | chr1_4:57463466-57463485 | Msa0172410:intron | 35.0% | |
| AAGACCATTCTTAATTCCGA+AGG | - | chr1_4:57463501-57463520 | Msa0172410:intron | 35.0% | |
| AGACCATTCTTAATTCCGAA+GGG | - | chr1_4:57463502-57463521 | Msa0172410:intron | 35.0% | |
| ! | TTTTCGGTTTAATGTCCCTT+CGG | + | chr1_4:57463520-57463539 | None:intergenic | 35.0% |
| AAGGGACATTAAACCGAAAA+GGG | - | chr1_4:57463520-57463539 | Msa0172410:intron | 35.0% | |
| ATTAAACCGAAAAGGGACTA+TGG | - | chr1_4:57463527-57463546 | Msa0172410:intron | 35.0% | |
| ! | TTAAGACCATAGTCCCTTTT+CGG | + | chr1_4:57463536-57463555 | None:intergenic | 35.0% |
| AAGAACACTCTTAATTCCGA+AGG | - | chr1_4:57463554-57463573 | Msa0172410:intron | 35.0% | |
| AGAACACTCTTAATTCCGAA+GGG | - | chr1_4:57463555-57463574 | Msa0172410:intron | 35.0% | |
| AAAGGAGTAGAAAAAGGAGA+AGG | - | chr1_4:57463582-57463601 | Msa0172410:intron | 35.0% | |
| ! | AAGAGTTTCATTGAGTTGTC+GGG | + | chr1_4:57463690-57463709 | None:intergenic | 35.0% |
| GACAACTCAATGAAACTCTT+TGG | - | chr1_4:57463690-57463709 | Msa0172410:CDS | 35.0% | |
| GGTGTATCTCTAATTAATGG+GGG | + | chr1_4:57464059-57464078 | None:intergenic | 35.0% | |
| GGGTGTATCTCTAATTAATG+GGG | + | chr1_4:57464060-57464079 | None:intergenic | 35.0% | |
| GGGGTGTATCTCTAATTAAT+GGG | + | chr1_4:57464061-57464080 | None:intergenic | 35.0% | |
| ! | AAAAAGTGCAAGTCCTACAT+CGG | + | chr1_4:57464118-57464137 | None:intergenic | 35.0% |
| CTAAACACAAATTCCCATGA+TGG | + | chr1_4:57464166-57464185 | None:intergenic | 35.0% | |
| TTACTTAATAGTGACCCACT+TGG | + | chr1_4:57464328-57464347 | None:intergenic | 35.0% | |
| TGTTAATCTCTTCAATAGGC+TGG | - | chr1_4:57464382-57464401 | Msa0172410:intron | 35.0% | |
| TCTTCAATAGGCTGGAATAT+TGG | - | chr1_4:57464390-57464409 | Msa0172410:intron | 35.0% | |
| !! | ATAGTGGAAGAAGATTTTGG+AGG | + | chr1_4:57464652-57464671 | None:intergenic | 35.0% |
| ! | CCAAAACTGACCTATTTTAC+AGG | + | chr1_4:57465656-57465675 | None:intergenic | 35.0% |
| ! | CCTGTAAAATAGGTCAGTTT+TGG | - | chr1_4:57465653-57465672 | Msa0172410:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr1_4:57465704-57465723 | Msa0172410:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr1_4:57467136-57467155 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr1_4:57465714-57465733 | Msa0172410:intron | 35.0% |
| TTGGTCCTTGCAAAAATACT+GGG | + | chr1_4:57467082-57467101 | None:intergenic | 35.0% | |
| TTTGGTCCTTGCAAAAATAC+TGG | + | chr1_4:57467083-57467102 | None:intergenic | 35.0% | |
| ! | CAGCAAAAATAGGTCAGTTT+TGG | + | chr1_4:57467138-57467157 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+TGG | - | chr1_4:57467136-57467155 | Msa0172410:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr1_4:57465704-57465723 | None:intergenic | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | - | chr1_4:57467257-57467276 | Msa0172410:intron | 35.0% |
| GGATGACAAAATAGATGGAT+TGG | + | chr1_4:57467485-57467504 | None:intergenic | 35.0% | |
| AACAGGGATGACAAAATAGA+TGG | + | chr1_4:57467490-57467509 | None:intergenic | 35.0% | |
| ACGGAGAAGATTTATTGTAG+GGG | + | chr1_4:57467652-57467671 | None:intergenic | 35.0% | |
| CTCCGTAAAGAGAATATTTC+AGG | - | chr1_4:57467666-57467685 | Msa0172410:intron | 35.0% | |
| TATTGTTAATGAGGTTGCTG+AGG | + | chr1_4:57467785-57467804 | None:intergenic | 35.0% | |
| AACTAATCTCAAGTCCAACA+AGG | + | chr1_4:57468235-57468254 | None:intergenic | 35.0% | |
| ! | TGTTGGACTTGAGATTAGTT+AGG | - | chr1_4:57468235-57468254 | Msa0172410:intron | 35.0% |
| ACAGAGAAAGTTAAGCTTGT+TGG | - | chr1_4:57468366-57468385 | Msa0172410:intron | 35.0% | |
| TTGGTATTGTGTTTCCTTGT+TGG | - | chr1_4:57468385-57468404 | Msa0172410:intron | 35.0% | |
| TCAGAGTGCAAACAATGTTA+GGG | - | chr1_4:57468426-57468445 | Msa0172410:intron | 35.0% | |
| !! | CTTTGTTGCACTAACTTGTT+GGG | - | chr1_4:57468917-57468936 | Msa0172410:intron | 35.0% |
| !!! | CAATGTTTTAAAATCCGGAC+CGG | - | chr1_4:57469288-57469307 | Msa0172410:intron | 35.0% |
| AACAATATTGTGCTGCATGT+AGG | - | chr1_4:57469878-57469897 | Msa0172410:intron | 35.0% | |
| AGTATATGAGAATCGGGTAT+GGG | + | chr1_4:57469948-57469967 | None:intergenic | 35.0% | |
| AAGTATATGAGAATCGGGTA+TGG | + | chr1_4:57469949-57469968 | None:intergenic | 35.0% | |
| ACGGGTAAGTATATGAGAAT+CGG | + | chr1_4:57469955-57469974 | None:intergenic | 35.0% | |
| AAATTATTCAATGCGAGGAC+GGG | + | chr1_4:57470057-57470076 | None:intergenic | 35.0% | |
| AAAGGAGCGACTAAATCAAT+CGG | + | chr1_4:57470173-57470192 | None:intergenic | 35.0% | |
| TCAAAACATGGATATGGGAT+GGG | + | chr1_4:57470327-57470346 | None:intergenic | 35.0% | |
| TTCAAAACATGGATATGGGA+TGG | + | chr1_4:57470328-57470347 | None:intergenic | 35.0% | |
| CCGATTTCAAAACATGGATA+TGG | + | chr1_4:57470333-57470352 | None:intergenic | 35.0% | |
| !!! | CAGGTTTTTTCCATTTTGAC+TGG | + | chr1_4:57470361-57470380 | None:intergenic | 35.0% |
| AAAACCTGTCAAATTGGGTT+TGG | - | chr1_4:57470373-57470392 | Msa0172410:intron | 35.0% | |
| AATTATCAAACTGTGGCTAG+TGG | + | chr1_4:57470465-57470484 | None:intergenic | 35.0% | |
| TGTCGTAGAAGTTCATGTTA+AGG | - | chr1_4:57470786-57470805 | Msa0172410:intron | 35.0% | |
| TGCCAAATAAGAGAGAATTG+TGG | - | chr1_4:57470985-57471004 | Msa0172410:intron | 35.0% | |
| GCCAAATAAGAGAGAATTGT+GGG | - | chr1_4:57470986-57471005 | Msa0172410:intron | 35.0% | |
| ACCCACAATTCTCTCTTATT+TGG | + | chr1_4:57470990-57471009 | None:intergenic | 35.0% | |
| TCAAATTGATACCAATGGAC+AGG | - | chr1_4:57461133-57461152 | Msa0172410:CDS | 35.0% | |
| CAAATTGATACCAATGGACA+GGG | - | chr1_4:57461134-57461153 | Msa0172410:CDS | 35.0% | |
| !! | ACTGTACATGACTTGCTATT+TGG | - | chr1_4:57471418-57471437 | Msa0172410:intron | 35.0% |
| ACATAACAAGATTGCACTTG+TGG | - | chr1_4:57471472-57471491 | Msa0172410:intron | 35.0% | |
| ACAGAGAACTTTGAGCTTGT+TGG | - | chr1_4:57460303-57460322 | Msa0172410:intron | 40.0% | |
| !!! | GTTGGTTTTGTGTTTCCTTG+TGG | - | chr1_4:57460321-57460340 | Msa0172410:intron | 40.0% |
| ! | TATTCTGAGGGTTGTAAAGG+TGG | + | chr1_4:57460396-57460415 | None:intergenic | 40.0% |
| ATCCAAGTCTAATCCACCAT+TGG | + | chr1_4:57461099-57461118 | None:intergenic | 40.0% | |
| !!! | AATGAGTTTTGAGAGGGTTG+TGG | - | chr1_4:57461766-57461785 | Msa0172410:intron | 40.0% |
| CTCATTCCAAAGACGTACTT+AGG | - | chr1_4:57461913-57461932 | Msa0172410:intron | 40.0% | |
| GTATTCCCTAAGTACGTCTT+TGG | + | chr1_4:57461922-57461941 | None:intergenic | 40.0% | |
| AAGACGTACTTAGGGAATAC+CGG | - | chr1_4:57461922-57461941 | Msa0172410:intron | 40.0% | |
| CTAATCTGACTCATGTGTAG+AGG | + | chr1_4:57461989-57462008 | None:intergenic | 40.0% | |
| GGTTTCCATTCTATCAATGG+TGG | + | chr1_4:57462016-57462035 | None:intergenic | 40.0% | |
| TGATAGAATGGAAACCGATG+CGG | - | chr1_4:57462020-57462039 | Msa0172410:intron | 40.0% | |
| TCTCTCCGTCCCAAAATATA+AGG | + | chr1_4:57462245-57462264 | None:intergenic | 40.0% | |
| GCACTACCCAAAATTATGCA+AGG | - | chr1_4:57463055-57463074 | Msa0172410:intron | 40.0% | |
| !!! | TAGCTGGACTTGTTTTATCC+TGG | + | chr1_4:57463103-57463122 | None:intergenic | 40.0% |
| GTCTTAGCACCATAATAGAG+TGG | + | chr1_4:57463237-57463256 | None:intergenic | 40.0% | |
| GTGCTAAGACCACTCAAATA+TGG | - | chr1_4:57463247-57463266 | Msa0172410:intron | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | + | chr1_4:57463259-57463278 | None:intergenic | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | + | chr1_4:57463259-57463278 | None:intergenic | 40.0% | |
| AGATCATTCTTGATTCCGAC+GGG | - | chr1_4:57463392-57463411 | Msa0172410:intron | 40.0% | |
| TGGAATAAACAATGTCCCGT+CGG | + | chr1_4:57463410-57463429 | None:intergenic | 40.0% | |
| TGTCCCTTCGGAATTAAGAA+TGG | + | chr1_4:57463508-57463527 | None:intergenic | 40.0% | |
| GAAGGGACATTAAACCGAAA+AGG | - | chr1_4:57463519-57463538 | Msa0172410:intron | 40.0% | |
| TTAATTCCGAAGGGACAGAA+AGG | - | chr1_4:57463564-57463583 | Msa0172410:intron | 40.0% | |
| GGACAGAAAGGAGTAGAAAA+AGG | - | chr1_4:57463576-57463595 | Msa0172410:intron | 40.0% | |
| TTGTCAAACAAGTCGAAGGA+GGG | - | chr1_4:57463607-57463626 | Msa0172410:intron | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | - | chr1_4:57463646-57463665 | Msa0172410:CDS | 40.0% | |
| CGTCAACACAAGTCAAGAAA+GGG | - | chr1_4:57463647-57463666 | Msa0172410:CDS | 40.0% | |
| ! | CAATGAAACTCTTTGGTGTG+TGG | - | chr1_4:57463697-57463716 | Msa0172410:CDS | 40.0% |
| CTGTGTGAGCTCTCTATTTA+TGG | - | chr1_4:57463726-57463745 | Msa0172410:CDS | 40.0% | |
| ! | GGGGGTGTATCTCTAATTAA+TGG | + | chr1_4:57464062-57464081 | None:intergenic | 40.0% |
| !! | AACACTAGTTCTACCCATCA+TGG | - | chr1_4:57464149-57464168 | Msa0172410:intron | 40.0% |
| !! | ACACTAGTTCTACCCATCAT+GGG | - | chr1_4:57464150-57464169 | Msa0172410:intron | 40.0% |
| ! | TTATGGCTTAGTGGACATGT+TGG | + | chr1_4:57464216-57464235 | None:intergenic | 40.0% |
| GATAGAGACTTATGGCTTAG+TGG | + | chr1_4:57464225-57464244 | None:intergenic | 40.0% | |
| AGCCATAAGTCTCTATCTGT+TGG | - | chr1_4:57464228-57464247 | Msa0172410:intron | 40.0% | |
| GACCAACAGATAGAGACTTA+TGG | + | chr1_4:57464233-57464252 | None:intergenic | 40.0% | |
| CTCAAATTGCTTGCACTTAG+GGG | + | chr1_4:57464269-57464288 | None:intergenic | 40.0% | |
| CCTCAAATTGCTTGCACTTA+GGG | + | chr1_4:57464270-57464289 | None:intergenic | 40.0% | |
| ACCTCAAATTGCTTGCACTT+AGG | + | chr1_4:57464271-57464290 | None:intergenic | 40.0% | |
| ! | AAGTGCAAGCAATTTGAGGT+CGG | - | chr1_4:57464271-57464290 | Msa0172410:intron | 40.0% |
| ATAGGCTGGAATATTGGACA+CGG | - | chr1_4:57464396-57464415 | Msa0172410:intron | 40.0% | |
| GAGACTATGTTTGGAAGTTC+AGG | + | chr1_4:57464800-57464819 | None:intergenic | 40.0% | |
| AGTAAATACCACTCTCTCTC+CGG | - | chr1_4:57465356-57465375 | Msa0172410:intron | 40.0% | |
| !! | GGTATTGGTCCCTGTAAAAT+AGG | - | chr1_4:57465643-57465662 | Msa0172410:intron | 40.0% |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | + | chr1_4:57467259-57467278 | None:intergenic | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | - | chr1_4:57467256-57467275 | Msa0172410:intron | 40.0% |
| ATAGGCTTTCCCATTGATGA+AGG | + | chr1_4:57467552-57467571 | None:intergenic | 40.0% | |
| CGGAGAAGATTTATTGTAGG+GGG | + | chr1_4:57467651-57467670 | None:intergenic | 40.0% | |
| CAAATGCATTGTTGCCTTGT+TGG | - | chr1_4:57468218-57468237 | Msa0172410:intron | 40.0% | |
| CATTAATGTCGTGTCGTGTA+TGG | - | chr1_4:57468265-57468284 | Msa0172410:intron | 40.0% | |
| TCACTAACATCGTTCCAACA+AGG | + | chr1_4:57468402-57468421 | None:intergenic | 40.0% | |
| GTCAGAGTGCAAACAATGTT+AGG | - | chr1_4:57468425-57468444 | Msa0172410:intron | 40.0% | |
| ! | TATTTGCTACGCCATGACAA+GGG | + | chr1_4:57468538-57468557 | None:intergenic | 40.0% |
| ! | ATATTTGCTACGCCATGACA+AGG | + | chr1_4:57468539-57468558 | None:intergenic | 40.0% |
| TTGTCATGGCGTAGCAAATA+TGG | - | chr1_4:57468538-57468557 | Msa0172410:intron | 40.0% | |
| CCAACAAGTTAGTGCAACAA+AGG | + | chr1_4:57468919-57468938 | None:intergenic | 40.0% | |
| ! | CCTTTGTTGCACTAACTTGT+TGG | - | chr1_4:57468916-57468935 | Msa0172410:intron | 40.0% |
| ! | CTTGTTGGGTTGTCTTTAGT+AGG | - | chr1_4:57468931-57468950 | Msa0172410:intron | 40.0% |
| AACAAGTTCACATAGCCAAC+TGG | - | chr1_4:57469847-57469866 | Msa0172410:intron | 40.0% | |
| GTATATGAGAATCGGGTATG+GGG | + | chr1_4:57469947-57469966 | None:intergenic | 40.0% | |
| CGGGTAAGTATATGAGAATC+GGG | + | chr1_4:57469954-57469973 | None:intergenic | 40.0% | |
| TTCAAATTCTCATCCCCGTT+GGG | + | chr1_4:57469991-57470010 | None:intergenic | 40.0% | |
| AATTATTCAATGCGAGGACG+GGG | + | chr1_4:57470056-57470075 | None:intergenic | 40.0% | |
| ! | CTGTCAAATTGGGTTTGGTT+CGG | - | chr1_4:57470378-57470397 | Msa0172410:intron | 40.0% |
| ! | TGTCAAATTGGGTTTGGTTC+GGG | - | chr1_4:57470379-57470398 | Msa0172410:intron | 40.0% |
| TAAAACTAATGAGCGCAGAG+CGG | - | chr1_4:57471328-57471347 | Msa0172410:intron | 40.0% | |
| !! | CGGTGCTACGTATACTTAAT+TGG | - | chr1_4:57471348-57471367 | Msa0172410:intron | 40.0% |
| CTCTTTCACACATGACATTC+TGG | + | chr1_4:57471498-57471517 | None:intergenic | 40.0% | |
| GCAATCTCACATGATGACAA+GGG | - | chr1_4:57471587-57471606 | Msa0172410:intron | 40.0% | |
| TCACTAACATCGTTCCCACA+AGG | + | chr1_4:57460339-57460358 | None:intergenic | 45.0% | |
| GTGGGAACGATGTTAGTGAA+TGG | - | chr1_4:57460340-57460359 | Msa0172410:intron | 45.0% | |
| GTGAATGGTCAGAGTGCAAA+CGG | - | chr1_4:57460355-57460374 | Msa0172410:intron | 45.0% | |
| CAGTGTATACTGTGCTACCT+GGG | - | chr1_4:57460438-57460457 | Msa0172410:intron | 45.0% | |
| ATGCAAACCAGTCCTTGGAA+TGG | - | chr1_4:57460461-57460480 | Msa0172410:intron | 45.0% | |
| ! | TTTTACGCCATTCCAAGGAC+TGG | + | chr1_4:57460471-57460490 | None:intergenic | 45.0% |
| ! | TATGGTTGGACTGCCTTTTG+TGG | - | chr1_4:57460493-57460512 | Msa0172410:intron | 45.0% |
| CAGGTGACAAATACTGCAAC+TGG | - | chr1_4:57461038-57461057 | Msa0172410:CDS | 45.0% | |
| AATGGACAGGGTTACCAGAA+GGG | - | chr1_4:57461146-57461165 | Msa0172410:CDS | 45.0% | |
| TAACTGTAAGGTGACCCTTC+TGG | + | chr1_4:57461163-57461182 | None:intergenic | 45.0% | |
| AGCAGTGCTACACGTATACT+TGG | - | chr1_4:57461276-57461295 | Msa0172410:intron | 45.0% | |
| ! | TGGAATGAGCTTTTTGCCAC+TGG | + | chr1_4:57461902-57461921 | None:intergenic | 45.0% |
| AGACGTACTTAGGGAATACC+GGG | - | chr1_4:57461923-57461942 | Msa0172410:intron | 45.0% | |
| GTCGTCCACCATTGATAGAA+TGG | - | chr1_4:57462008-57462027 | Msa0172410:intron | 45.0% | |
| AGAAGGCCAAGAATGTTTGG+TGG | - | chr1_4:57462356-57462375 | Msa0172410:intron | 45.0% | |
| GAAGGCCAAGAATGTTTGGT+GGG | - | chr1_4:57462357-57462376 | Msa0172410:intron | 45.0% | |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | - | chr1_4:57463033-57463052 | Msa0172410:intron | 45.0% |
| !!! | GACTTGTTTTATCCTGGAGG+CGG | + | chr1_4:57463097-57463116 | None:intergenic | 45.0% |
| !!! | CTGGACTTGTTTTATCCTGG+AGG | + | chr1_4:57463100-57463119 | None:intergenic | 45.0% |
| GCACTACGACCACTCAAATA+TGG | - | chr1_4:57463314-57463333 | Msa0172410:intron | 45.0% | |
| TCTACTCCTTTCTGTCCCTT+CGG | + | chr1_4:57463573-57463592 | None:intergenic | 45.0% | |
| GGACTTGTCAAACAAGTCGA+AGG | - | chr1_4:57463603-57463622 | Msa0172410:intron | 45.0% | |
| CTTGTCAAACAAGTCGAAGG+AGG | - | chr1_4:57463606-57463625 | Msa0172410:intron | 45.0% | |
| TGGACATGTTGGAACATGTG+TGG | + | chr1_4:57464205-57464224 | None:intergenic | 45.0% | |
| CCCTAAGTGCAAGCAATTTG+AGG | - | chr1_4:57464267-57464286 | Msa0172410:intron | 45.0% | |
| ! | AGTGCAAGCAATTTGAGGTC+GGG | - | chr1_4:57464272-57464291 | Msa0172410:intron | 45.0% |
| CTTAATAGTGACCCACTTGG+TGG | + | chr1_4:57464325-57464344 | None:intergenic | 45.0% | |
| !! | TTTTAGGGGGAGAGAATGAG+AGG | - | chr1_4:57464480-57464499 | Msa0172410:intron | 45.0% |
| TTCAGGAAGAGAGGAGATTG+AGG | + | chr1_4:57464783-57464802 | None:intergenic | 45.0% | |
| GTTTGGAAGTTCAGGAAGAG+AGG | + | chr1_4:57464792-57464811 | None:intergenic | 45.0% | |
| ATGCTGTTACTAGGCTGCAT+TGG | + | chr1_4:57464877-57464896 | None:intergenic | 45.0% | |
| ! | ATTTTAGACCGGAGAGAGAG+TGG | + | chr1_4:57465367-57465386 | None:intergenic | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr1_4:57467269-57467288 | None:intergenic | 45.0% |
| GTTGGAACGATGTTAGTGAG+TGG | - | chr1_4:57468403-57468422 | Msa0172410:intron | 45.0% | |
| CAGTGTATACTGTGCTACCT+GGG | - | chr1_4:57460438-57460457 | Msa0172410:intron | 45.0% | |
| CATGGCGTAGCAAATATGGT+TGG | - | chr1_4:57468542-57468561 | Msa0172410:intron | 45.0% | |
| ! | TATGGTTGGACTGCCTTTTG+TGG | - | chr1_4:57460493-57460512 | Msa0172410:intron | 45.0% |
| GCTTTAACCGAATCGACTAC+CGG | + | chr1_4:57469310-57469329 | None:intergenic | 45.0% | |
| !! | AGTCGATTCGGTTAAAGCAC+TGG | - | chr1_4:57469312-57469331 | Msa0172410:intron | 45.0% |
| !! | GTCGATTCGGTTAAAGCACT+GGG | - | chr1_4:57469313-57469332 | Msa0172410:intron | 45.0% |
| AGACTGGGTCAATAGTCATG+CGG | + | chr1_4:57469379-57469398 | None:intergenic | 45.0% | |
| TATTGTGCTGCATGTAGGCA+TGG | - | chr1_4:57469883-57469902 | Msa0172410:intron | 45.0% | |
| CTGCATGTAGGCATGGTAAT+GGG | - | chr1_4:57469890-57469909 | Msa0172410:intron | 45.0% | |
| ! | TGCATGTAGGCATGGTAATG+GGG | - | chr1_4:57469891-57469910 | Msa0172410:intron | 45.0% |
| GTTCAAATTCTCATCCCCGT+TGG | + | chr1_4:57469992-57470011 | None:intergenic | 45.0% | |
| ! | TTCTGCATTCTAGACGGGTT+TGG | - | chr1_4:57470266-57470285 | Msa0172410:intron | 45.0% |
| ! | TCTGCATTCTAGACGGGTTT+GGG | - | chr1_4:57470267-57470286 | Msa0172410:intron | 45.0% |
| ! | ATTCTAGACGGGTTTGGGTA+TGG | - | chr1_4:57470272-57470291 | Msa0172410:intron | 45.0% |
| ! | TTCTAGACGGGTTTGGGTAT+GGG | - | chr1_4:57470273-57470292 | Msa0172410:intron | 45.0% |
| ATGGATATGGGATGGGTAAC+GGG | + | chr1_4:57470320-57470339 | None:intergenic | 45.0% | |
| CATGGATATGGGATGGGTAA+CGG | + | chr1_4:57470321-57470340 | None:intergenic | 45.0% | |
| GGTTCCCCGATTTCAAAACA+TGG | + | chr1_4:57470339-57470358 | None:intergenic | 45.0% | |
| CGAACCAAACCCAATTTGAC+AGG | + | chr1_4:57470380-57470399 | None:intergenic | 45.0% | |
| GACAACAAAACCCATACCTG+TGG | + | chr1_4:57470412-57470431 | None:intergenic | 45.0% | |
| CAGGTGACAAATACTGCAAC+TGG | - | chr1_4:57461038-57461057 | Msa0172410:CDS | 45.0% | |
| AAATACTGCAACTGGAGCTC+AGG | - | chr1_4:57461046-57461065 | Msa0172410:CDS | 45.0% | |
| ! | TCAGGTAACGGTGAGAATAG+TGG | - | chr1_4:57471093-57471112 | Msa0172410:CDS | 45.0% |
| ATCTAAGTCCAGTCCACCAT+TGG | + | chr1_4:57471128-57471147 | None:intergenic | 45.0% | |
| CGCAATCTCACATGATGACA+AGG | - | chr1_4:57471586-57471605 | Msa0172410:intron | 45.0% | |
| GTTGAAGTGATAGACGGCAT+AGG | + | chr1_4:57471684-57471703 | None:intergenic | 45.0% | |
| !! | CTCGGTGTTGAAGTGATAGA+CGG | + | chr1_4:57471690-57471709 | None:intergenic | 45.0% |
| !!! | TTATTCTTTTTTTTTTTTTT+TGG | + | chr1_4:57461855-57461874 | None:intergenic | 5.0% |
| !!! | TTGATATATATTTTATTATT+TGG | + | chr1_4:57464008-57464027 | None:intergenic | 5.0% |
| !!! | ATTTTTTTATTATATAATTG+GGG | + | chr1_4:57465783-57465802 | None:intergenic | 5.0% |
| !! | AAAAATATATTAAAAAATTC+CGG | - | chr1_4:57465806-57465825 | Msa0172410:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr1_4:57465894-57465913 | Msa0172410:intron | 5.0% |
| !!! | TAAAAAATTTTAAAAAATTC+TGG | - | chr1_4:57465934-57465953 | Msa0172410:intron | 5.0% |
| !! | AAAAAAATTTAAAAAAATTC+TGG | - | chr1_4:57466022-57466041 | Msa0172410:intron | 5.0% |
| !!! | AAAATTTTTCATTAAAATTT+CGG | - | chr1_4:57466687-57466706 | Msa0172410:intron | 5.0% |
| !!! | GAAAAATATTTTAAAAAATA+AGG | + | chr1_4:57466857-57466876 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr1_4:57465894-57465913 | None:intergenic | 5.0% |
| !! | TAAAAAATATTAAAAAATTC+TGG | + | chr1_4:57466953-57466972 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr1_4:57465894-57465913 | None:intergenic | 5.0% |
| !! | AAAAATTAATAAAAAAATTC+TGG | + | chr1_4:57467053-57467072 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | + | chr1_4:57467101-57467120 | None:intergenic | 5.0% |
| !! | AAGTTATATTAAAAAATAAT+AGG | + | chr1_4:57467301-57467320 | None:intergenic | 5.0% |
| !!! | TTTTGAATAAAATTAAATTT+TGG | - | chr1_4:57470712-57470731 | Msa0172410:intron | 5.0% |
| !! | ATAATTACATTATATATTTA+TGG | + | chr1_4:57471959-57471978 | None:intergenic | 5.0% |
| GTCAGAGTGCAAACGGTGTA+AGG | - | chr1_4:57460362-57460381 | Msa0172410:intron | 50.0% | |
| CCAGGTAGCACAGTATACAC+TGG | + | chr1_4:57460440-57460459 | None:intergenic | 50.0% | |
| CCAGTGTATACTGTGCTACC+TGG | - | chr1_4:57460437-57460456 | Msa0172410:intron | 50.0% | |
| CACAAGACTCTCTACCACGA+GGG | + | chr1_4:57460528-57460547 | None:intergenic | 50.0% | |
| ! | AGTCTTGTGGCAAGTGCTTG+AGG | - | chr1_4:57460539-57460558 | Msa0172410:intron | 50.0% |
| GTCTTGTGGCAAGTGCTTGA+GGG | - | chr1_4:57460540-57460559 | Msa0172410:intron | 50.0% | |
| !! | CGCCAATGGTGGATTAGACT+TGG | - | chr1_4:57461094-57461113 | Msa0172410:CDS | 50.0% |
| CTTCTGGTAACCCTGTCCAT+TGG | + | chr1_4:57461147-57461166 | None:intergenic | 50.0% | |
| CAATGGACAGGGTTACCAGA+AGG | - | chr1_4:57461145-57461164 | Msa0172410:CDS | 50.0% | |
| CTAAGTTACATGGGCTCCAG+TGG | - | chr1_4:57461883-57461902 | Msa0172410:intron | 50.0% | |
| TTTCTCCTGGGAATCGAACC+CGG | + | chr1_4:57461944-57461963 | None:intergenic | 50.0% | |
| !! | GGGTAAGCGTTGTTTCTCCT+GGG | + | chr1_4:57461956-57461975 | None:intergenic | 50.0% |
| !! | TGGGTAAGCGTTGTTTCTCC+TGG | + | chr1_4:57461957-57461976 | None:intergenic | 50.0% |
| TGTCGCCCACCAAACATTCT+TGG | + | chr1_4:57462365-57462384 | None:intergenic | 50.0% | |
| ! | GAATGTTTGGTGGGCGACAT+TGG | - | chr1_4:57462366-57462385 | Msa0172410:intron | 50.0% |
| ! | TACTAGGTTGAGTCACGACC+AGG | - | chr1_4:57463008-57463027 | Msa0172410:intron | 50.0% |
| ACGTCTTAAAGAGAGCGACC+TGG | + | chr1_4:57463029-57463048 | None:intergenic | 50.0% | |
| CAAGTCCAGCTACACATGTG+CGG | - | chr1_4:57463111-57463130 | Msa0172410:intron | 50.0% | |
| GTTAACCGCACATGTGTAGC+TGG | + | chr1_4:57463119-57463138 | None:intergenic | 50.0% | |
| GTGTGTGTTCCATCCGATGT+AGG | - | chr1_4:57464102-57464121 | Msa0172410:intron | 50.0% | |
| AGTGCAAGTCCTACATCGGA+TGG | + | chr1_4:57464114-57464133 | None:intergenic | 50.0% | |
| ! | AGCAATTTGAGGTCGGGCTA+AGG | - | chr1_4:57464278-57464297 | Msa0172410:intron | 50.0% |
| TTGACTAGTGCACCACCAAG+TGG | - | chr1_4:57464310-57464329 | Msa0172410:intron | 50.0% | |
| TGACTAGTGCACCACCAAGT+GGG | - | chr1_4:57464311-57464330 | Msa0172410:intron | 50.0% | |
| !! | TACTTCAGACTGAGAGCGTC+AGG | + | chr1_4:57464445-57464464 | None:intergenic | 50.0% |
| CCAGGTAGCACAGTATACAC+TGG | + | chr1_4:57460440-57460459 | None:intergenic | 50.0% | |
| CCAGTGTATACTGTGCTACC+TGG | - | chr1_4:57460437-57460456 | Msa0172410:intron | 50.0% | |
| ATGCAAACCAGCCCTTGTCA+TGG | - | chr1_4:57468524-57468543 | Msa0172410:intron | 50.0% | |
| CCAACAGGCAGAGATTCTTG+CGG | - | chr1_4:57468589-57468608 | Msa0172410:intron | 50.0% | |
| GCTGCATGTAGGCATGGTAA+TGG | - | chr1_4:57469889-57469908 | Msa0172410:intron | 50.0% | |
| !! | ATGTAGGCATGGTAATGGGG+CGG | - | chr1_4:57469894-57469913 | Msa0172410:intron | 50.0% |
| TGAGAATCGGGTATGGGGAT+GGG | + | chr1_4:57469942-57469961 | None:intergenic | 50.0% | |
| ATGAGAATCGGGTATGGGGA+TGG | + | chr1_4:57469943-57469962 | None:intergenic | 50.0% | |
| TTGGGTATGAGCAGGGTAAC+GGG | + | chr1_4:57469973-57469992 | None:intergenic | 50.0% | |
| GTTGGGTATGAGCAGGGTAA+CGG | + | chr1_4:57469974-57469993 | None:intergenic | 50.0% | |
| GTTACCCTGCTCATACCCAA+CGG | - | chr1_4:57469973-57469992 | Msa0172410:intron | 50.0% | |
| TTACCCTGCTCATACCCAAC+GGG | - | chr1_4:57469974-57469993 | Msa0172410:intron | 50.0% | |
| !! | GGGATGGGTAACGGGTATAT+AGG | + | chr1_4:57470312-57470331 | None:intergenic | 50.0% |
| ATCGGGGAACCCAGTCAAAA+TGG | - | chr1_4:57470348-57470367 | Msa0172410:intron | 50.0% | |
| !! | CAAATTGGGTTTGGTTCGGG+CGG | - | chr1_4:57470382-57470401 | Msa0172410:intron | 50.0% |
| !! | AAATTGGGTTTGGTTCGGGC+GGG | - | chr1_4:57470383-57470402 | Msa0172410:intron | 50.0% |
| TGGCTAGTGGTAGTTGAACC+GGG | + | chr1_4:57470452-57470471 | None:intergenic | 50.0% | |
| GTGGCTAGTGGTAGTTGAAC+CGG | + | chr1_4:57470453-57470472 | None:intergenic | 50.0% | |
| TTAGAATCCGGTCCGGTTCA+CGG | - | chr1_4:57470502-57470521 | Msa0172410:intron | 50.0% | |
| TCCTGGGTTGCTTGGATATC+CGG | - | chr1_4:57470582-57470601 | Msa0172410:intron | 50.0% | |
| ! | GGTTGGTCAGCTAATCAGAC+CGG | + | chr1_4:57470604-57470623 | None:intergenic | 50.0% |
| !!! | TTTTAAAACCCGGACCGACC+CGG | + | chr1_4:57470667-57470686 | None:intergenic | 50.0% |
| ! | GTGGTGATGACTGATGATGC+AGG | - | chr1_4:57471048-57471067 | Msa0172410:CDS | 50.0% |
| TGCAACTGGAGCTCAGGTAA+CGG | - | chr1_4:57471081-57471100 | Msa0172410:CDS | 50.0% | |
| !! | ATAGTGGACCAGTGCTCCAA+TGG | - | chr1_4:57471109-57471128 | Msa0172410:CDS | 50.0% |
| ATTCTGAACGCCCTGTCCAT+TGG | + | chr1_4:57471176-57471195 | None:intergenic | 50.0% | |
| ! | AATGGACAGGGCGTTCAGAA+TGG | - | chr1_4:57471175-57471194 | Msa0172410:CDS | 50.0% |
| CGTCTATCACTTCAACACCG+AGG | - | chr1_4:57471688-57471707 | Msa0172410:CDS | 50.0% | |
| !! | CAAGGACTGGTTTGCATCCC+AGG | + | chr1_4:57460458-57460477 | None:intergenic | 55.0% |
| CTGGGATGCAAACCAGTCCT+TGG | - | chr1_4:57460456-57460475 | Msa0172410:intron | 55.0% | |
| ! | ACTGCCTTTTGTGGACCCCA+GGG | - | chr1_4:57460502-57460521 | Msa0172410:intron | 55.0% |
| CCACAAGACTCTCTACCACG+AGG | + | chr1_4:57460529-57460548 | None:intergenic | 55.0% | |
| CCTCGTGGTAGAGAGTCTTG+TGG | - | chr1_4:57460526-57460545 | Msa0172410:intron | 55.0% | |
| !! | ATAGTGGACCAGTGCGCCAA+TGG | - | chr1_4:57461080-57461099 | Msa0172410:CDS | 55.0% |
| CTAATCCACCATTGGCGCAC+TGG | + | chr1_4:57461091-57461110 | None:intergenic | 55.0% | |
| GAATACCGGGTTCGATTCCC+AGG | - | chr1_4:57461936-57461955 | Msa0172410:intron | 55.0% | |
| ! | TGTGTAGAGGCATGCGCACT+GGG | + | chr1_4:57461976-57461995 | None:intergenic | 55.0% |
| ! | ATGTGTAGAGGCATGCGCAC+TGG | + | chr1_4:57461977-57461996 | None:intergenic | 55.0% |
| ! | TTTGAGGTCGGGCTAAGGTG+AGG | - | chr1_4:57464283-57464302 | Msa0172410:intron | 55.0% |
| ! | ACTGCCTTTTGTGGACCAGC+TGG | - | chr1_4:57468565-57468584 | Msa0172410:intron | 55.0% |
| ! | CTGCCTTTTGTGGACCAGCT+GGG | - | chr1_4:57468566-57468585 | Msa0172410:intron | 55.0% |
| CCGCAAGAATCTCTGCCTGT+TGG | + | chr1_4:57468592-57468611 | None:intergenic | 55.0% | |
| ATCCGGACCGGTAGTCGATT+CGG | - | chr1_4:57469300-57469319 | Msa0172410:intron | 55.0% | |
| AACCGAATCGACTACCGGTC+CGG | + | chr1_4:57469305-57469324 | None:intergenic | 55.0% | |
| TGGGTCACTGAGTCAGTGGT+CGG | - | chr1_4:57469332-57469351 | Msa0172410:intron | 55.0% | |
| TGAGTCAGTGGTCGGACCAA+TGG | - | chr1_4:57469340-57469359 | Msa0172410:intron | 55.0% | |
| GAGTCAGTGGTCGGACCAAT+GGG | - | chr1_4:57469341-57469360 | Msa0172410:intron | 55.0% | |
| !! | TGTAGGCATGGTAATGGGGC+GGG | - | chr1_4:57469895-57469914 | Msa0172410:intron | 55.0% |
| TACCCTGCTCATACCCAACG+GGG | - | chr1_4:57469975-57469994 | Msa0172410:intron | 55.0% | |
| ATCCCCGTTGGGTATGAGCA+GGG | + | chr1_4:57469980-57469999 | None:intergenic | 55.0% | |
| TTCAATGCGAGGACGGGGAA+GGG | + | chr1_4:57470051-57470070 | None:intergenic | 55.0% | |
| ATTCAATGCGAGGACGGGGA+AGG | + | chr1_4:57470052-57470071 | None:intergenic | 55.0% | |
| ! | GACGGGTTTGGGTATGGGTT+CGG | - | chr1_4:57470278-57470297 | Msa0172410:intron | 55.0% |
| ACGGGTTTGGGTATGGGTTC+GGG | - | chr1_4:57470279-57470298 | Msa0172410:intron | 55.0% | |
| TTTGGGTATGGGTTCGGGGT+GGG | - | chr1_4:57470284-57470303 | Msa0172410:intron | 55.0% | |
| CATGCCTAGCTGCATGTACC+CGG | - | chr1_4:57470431-57470450 | Msa0172410:intron | 55.0% | |
| TGAACCGGGTACATGCAGCT+AGG | + | chr1_4:57470438-57470457 | None:intergenic | 55.0% | |
| TAGAATCCGGTCCGGTTCAC+GGG | - | chr1_4:57470503-57470522 | Msa0172410:intron | 55.0% | |
| GTTATGACCCACCCGTGAAC+CGG | + | chr1_4:57470517-57470536 | None:intergenic | 55.0% | |
| GGTTCACGGGTGGGTCATAA+CGG | - | chr1_4:57470516-57470535 | Msa0172410:intron | 55.0% | |
| TCCAAGCAACCCAGGAAACC+CGG | + | chr1_4:57470578-57470597 | None:intergenic | 55.0% | |
| ACCGGATATCCAAGCAACCC+AGG | + | chr1_4:57470586-57470605 | None:intergenic | 55.0% | |
| ! | GACTGCCTTTTGTGGACCCC+AGG | - | chr1_4:57460501-57460520 | Msa0172410:intron | 60.0% |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | + | chr1_4:57463092-57463111 | None:intergenic | 60.0% |
| !! | CAAGGGCTGGTTTGCATCCC+AGG | + | chr1_4:57468521-57468540 | None:intergenic | 60.0% |
| TGCTACGCCATGACAAGGGC+TGG | + | chr1_4:57468534-57468553 | None:intergenic | 60.0% | |
| TGGCCCAGCTGGTCCACAAA+AGG | + | chr1_4:57468572-57468591 | None:intergenic | 60.0% | |
| GCACTGGGTCACTGAGTCAG+TGG | - | chr1_4:57469328-57469347 | Msa0172410:intron | 60.0% | |
| TGGTCGGACCAATGGGTCAC+TGG | - | chr1_4:57469348-57469367 | Msa0172410:intron | 60.0% | |
| CGGACCAATGGGTCACTGGT+TGG | - | chr1_4:57469352-57469371 | Msa0172410:intron | 60.0% | |
| CGGTCCAACCAGTGACCCAT+TGG | + | chr1_4:57469359-57469378 | None:intergenic | 60.0% | |
| !! | GTAGGCATGGTAATGGGGCG+GGG | - | chr1_4:57469896-57469915 | Msa0172410:intron | 60.0% |
| CATCCCCGTTGGGTATGAGC+AGG | + | chr1_4:57469981-57470000 | None:intergenic | 60.0% | |
| ATACCCGAACCCGTCGGGAA+CGG | + | chr1_4:57470022-57470041 | None:intergenic | 60.0% | |
| TCAATGCGAGGACGGGGAAG+GGG | + | chr1_4:57470050-57470069 | None:intergenic | 60.0% | |
| CGGGTTTGGGTATGGGTTCG+GGG | - | chr1_4:57470280-57470299 | Msa0172410:intron | 60.0% | |
| GTTTGGGTATGGGTTCGGGG+TGG | - | chr1_4:57470283-57470302 | Msa0172410:intron | 60.0% | |
| GGGCGGGTAACCACAGGTAT+GGG | - | chr1_4:57470399-57470418 | Msa0172410:intron | 60.0% | |
| !! | GGTTCGCCGATTTGTCCACC+CGG | - | chr1_4:57470537-57470556 | Msa0172410:intron | 60.0% |
| AAACCCGGTGTGACCCATGC+GGG | + | chr1_4:57470563-57470582 | None:intergenic | 60.0% | |
| GAAACCCGGTGTGACCCATG+CGG | + | chr1_4:57470564-57470583 | None:intergenic | 60.0% | |
| ATGGGTCACACCGGGTTTCC+TGG | - | chr1_4:57470565-57470584 | Msa0172410:intron | 60.0% | |
| TGGGTCACACCGGGTTTCCT+GGG | - | chr1_4:57470566-57470585 | Msa0172410:intron | 60.0% | |
| ACCGGGTTTCCTGGGTTGCT+TGG | - | chr1_4:57470574-57470593 | Msa0172410:intron | 60.0% | |
| GTGGACCAGTGCTCCAATGG+TGG | - | chr1_4:57471112-57471131 | Msa0172410:CDS | 60.0% | |
| CCAGTCCACCATTGGAGCAC+TGG | + | chr1_4:57471120-57471139 | None:intergenic | 60.0% | |
| !! | CCAGTGCTCCAATGGTGGAC+TGG | - | chr1_4:57471117-57471136 | Msa0172410:CDS | 60.0% |
| AGGGCCCTGGGGTCCACAAA+AGG | + | chr1_4:57460509-57460528 | None:intergenic | 65.0% | |
| TCTCTACCACGAGGGCCCTG+GGG | + | chr1_4:57460520-57460539 | None:intergenic | 65.0% | |
| CTCTCTACCACGAGGGCCCT+GGG | + | chr1_4:57460521-57460540 | None:intergenic | 65.0% | |
| ACTCTCTACCACGAGGGCCC+TGG | + | chr1_4:57460522-57460541 | None:intergenic | 65.0% | |
| GTGGACCAGTGCGCCAATGG+TGG | - | chr1_4:57461083-57461102 | Msa0172410:CDS | 65.0% | |
| CTATCAACCACGCCGCCTCC+AGG | - | chr1_4:57463082-57463101 | Msa0172410:intron | 65.0% | |
| TGTGGACCAGCTGGGCCAAC+AGG | - | chr1_4:57468574-57468593 | Msa0172410:intron | 65.0% | |
| TCTCTGCCTGTTGGCCCAGC+TGG | + | chr1_4:57468583-57468602 | None:intergenic | 65.0% | |
| ! | GTAATGGGGCGGGGTGGAGA+CGG | - | chr1_4:57469905-57469924 | Msa0172410:intron | 65.0% |
| TAATGGGGCGGGGTGGAGAC+GGG | - | chr1_4:57469906-57469925 | Msa0172410:intron | 65.0% | |
| AACCCCATCCCCGTTCCCGA+CGG | - | chr1_4:57470009-57470028 | Msa0172410:intron | 65.0% | |
| AACCCGTCGGGAACGGGGAT+GGG | + | chr1_4:57470015-57470034 | None:intergenic | 65.0% | |
| ! | ATCCCCGTTCCCGACGGGTT+CGG | - | chr1_4:57470015-57470034 | Msa0172410:intron | 65.0% |
| TACCCGAACCCGTCGGGAAC+GGG | + | chr1_4:57470021-57470040 | None:intergenic | 65.0% | |
| CGAGGATACCCGAACCCGTC+GGG | + | chr1_4:57470027-57470046 | None:intergenic | 65.0% | |
| GCGAGGATACCCGAACCCGT+CGG | + | chr1_4:57470028-57470047 | None:intergenic | 65.0% | |
| ! | TGGTTCGGGCGGGTAACCAC+AGG | - | chr1_4:57470393-57470412 | Msa0172410:intron | 65.0% |
| CGGGCGGGTAACCACAGGTA+TGG | - | chr1_4:57470398-57470417 | Msa0172410:intron | 65.0% | |
| AATCCGGTCCGGTTCACGGG+TGG | - | chr1_4:57470506-57470525 | Msa0172410:intron | 65.0% | |
| ATCCGGTCCGGTTCACGGGT+GGG | - | chr1_4:57470507-57470526 | Msa0172410:intron | 65.0% | |
| TGCGGGCCGGGTGGACAAAT+CGG | + | chr1_4:57470546-57470565 | None:intergenic | 65.0% | |
| ATTTGTCCACCCGGCCCGCA+TGG | - | chr1_4:57470546-57470565 | Msa0172410:intron | 65.0% | |
| TTTGTCCACCCGGCCCGCAT+GGG | - | chr1_4:57470547-57470566 | Msa0172410:intron | 65.0% | |
| AAAACCCGGACCGACCCGGT+CGG | + | chr1_4:57470663-57470682 | None:intergenic | 65.0% | |
| !! | GGCATGGTAATGGGGCGGGG+TGG | - | chr1_4:57469899-57469918 | Msa0172410:intron | 70.0% |
| ACCCCATCCCCGTTCCCGAC+GGG | - | chr1_4:57470010-57470029 | Msa0172410:intron | 70.0% | |
| ACCCGTCGGGAACGGGGATG+GGG | + | chr1_4:57470014-57470033 | None:intergenic | 70.0% | |
| GAACCCGTCGGGAACGGGGA+TGG | + | chr1_4:57470016-57470035 | None:intergenic | 70.0% | |
| ! | TCCCCGTTCCCGACGGGTTC+GGG | - | chr1_4:57470016-57470035 | Msa0172410:intron | 70.0% |
| ACCCGAACCCGTCGGGAACG+GGG | + | chr1_4:57470020-57470039 | None:intergenic | 70.0% | |
| GACCCACCCGTGAACCGGAC+CGG | + | chr1_4:57470512-57470531 | None:intergenic | 70.0% | |
| GAACCGGCAACCGGAGGGGT+GGG | + | chr1_4:57470629-57470648 | None:intergenic | 70.0% | |
| GGTCGAACCGGCAACCGGAG+GGG | + | chr1_4:57470633-57470652 | None:intergenic | 70.0% | |
| CGGTCGAACCGGCAACCGGA+GGG | + | chr1_4:57470634-57470653 | None:intergenic | 70.0% | |
| !! | CCTCCGGTTGCCGGTTCGAC+CGG | - | chr1_4:57470632-57470651 | Msa0172410:intron | 70.0% |
| CGACCGGTCGAACCGGCAAC+CGG | + | chr1_4:57470638-57470657 | None:intergenic | 70.0% | |
| !! | CGGTTGCCGGTTCGACCGGT+CGG | - | chr1_4:57470636-57470655 | Msa0172410:intron | 70.0% |
| GTCGGTCCGACCGGTCGAAC+CGG | + | chr1_4:57470645-57470664 | None:intergenic | 70.0% | |
| GTTCGACCGGTCGGACCGAC+CGG | - | chr1_4:57470645-57470664 | Msa0172410:intron | 70.0% | |
| TTCGACCGGTCGGACCGACC+GGG | - | chr1_4:57470646-57470665 | Msa0172410:intron | 70.0% | |
| TGTGGACCCCAGGGCCCTCG+TGG | - | chr1_4:57460511-57460530 | Msa0172410:intron | 75.0% | |
| TGTGACCCATGCGGGCCGGG+TGG | + | chr1_4:57470555-57470574 | None:intergenic | 75.0% | |
| CGGTGTGACCCATGCGGGCC+GGG | + | chr1_4:57470558-57470577 | None:intergenic | 75.0% | |
| CCGGTGTGACCCATGCGGGC+CGG | + | chr1_4:57470559-57470578 | None:intergenic | 75.0% | |
| CCGGCCCGCATGGGTCACAC+CGG | - | chr1_4:57470556-57470575 | Msa0172410:intron | 75.0% | |
| CGGCCCGCATGGGTCACACC+GGG | - | chr1_4:57470557-57470576 | Msa0172410:intron | 75.0% | |
| GACCAACCCGCCCACCCCTC+CGG | - | chr1_4:57470616-57470635 | Msa0172410:intron | 75.0% | |
| AACCGGAGGGGTGGGCGGGT+TGG | + | chr1_4:57470621-57470640 | None:intergenic | 75.0% | |
| CGAACCGGCAACCGGAGGGG+TGG | + | chr1_4:57470630-57470649 | None:intergenic | 75.0% | |
| CCGGTCGAACCGGCAACCGG+AGG | + | chr1_4:57470635-57470654 | None:intergenic | 75.0% | |
| ACCGGTCGGACCGACCGGGT+CGG | - | chr1_4:57470650-57470669 | Msa0172410:intron | 75.0% | |
| ACCGACCCGGTCGGTCCGAC+CGG | + | chr1_4:57470654-57470673 | None:intergenic | 75.0% | |
| TCGGACCGACCGGGTCGGTC+CGG | - | chr1_4:57470655-57470674 | Msa0172410:intron | 75.0% | |
| ! | GCGAGGACGGGGAAGGGGCG+AGG | + | chr1_4:57470045-57470064 | None:intergenic | 80.0% |
| ! | CGGCAACCGGAGGGGTGGGC+GGG | + | chr1_4:57470625-57470644 | None:intergenic | 80.0% |
| ! | CCGGCAACCGGAGGGGTGGG+CGG | + | chr1_4:57470626-57470645 | None:intergenic | 80.0% |
| ! | CCGCCCACCCCTCCGGTTGC+CGG | - | chr1_4:57470623-57470642 | Msa0172410:intron | 80.0% |
| ! | CGGACCGACCGGGTCGGTCC+GGG | - | chr1_4:57470656-57470675 | Msa0172410:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 57460229 | 57472011 | 57460229 | ID=Msa0172410;Name=Msa0172410 |
| chr1_4 | mRNA | 57460229 | 57472011 | 57460229 | ID=Msa0172410-mRNA-1;Parent=Msa0172410;Name=Msa0172410-mRNA-1;_AED=0.41;_eAED=0.41;_QI=63|0.5|0.2|0.8|0.5|0.2|5|0|257 |
| chr1_4 | exon | 57460229 | 57460246 | 57460229 | ID=Msa0172410-mRNA-1:exon:17591;Parent=Msa0172410-mRNA-1 |
| chr1_4 | exon | 57461033 | 57461170 | 57461033 | ID=Msa0172410-mRNA-1:exon:17590;Parent=Msa0172410-mRNA-1 |
| chr1_4 | exon | 57463616 | 57463810 | 57463616 | ID=Msa0172410-mRNA-1:exon:17589;Parent=Msa0172410-mRNA-1 |
| chr1_4 | exon | 57471047 | 57471199 | 57471047 | ID=Msa0172410-mRNA-1:exon:17588;Parent=Msa0172410-mRNA-1 |
| chr1_4 | exon | 57471679 | 57472011 | 57471679 | ID=Msa0172410-mRNA-1:exon:17587;Parent=Msa0172410-mRNA-1 |
| chr1_4 | five_prime_UTR | 57471949 | 57472011 | 57471949 | ID=Msa0172410-mRNA-1:five_prime_utr;Parent=Msa0172410-mRNA-1 |
| chr1_4 | CDS | 57471679 | 57471948 | 57471679 | ID=Msa0172410-mRNA-1:cds;Parent=Msa0172410-mRNA-1 |
| chr1_4 | CDS | 57471047 | 57471199 | 57471047 | ID=Msa0172410-mRNA-1:cds;Parent=Msa0172410-mRNA-1 |
| chr1_4 | CDS | 57463616 | 57463810 | 57463616 | ID=Msa0172410-mRNA-1:cds;Parent=Msa0172410-mRNA-1 |
| chr1_4 | CDS | 57461033 | 57461170 | 57461033 | ID=Msa0172410-mRNA-1:cds;Parent=Msa0172410-mRNA-1 |
| chr1_4 | CDS | 57460229 | 57460246 | 57460229 | ID=Msa0172410-mRNA-1:cds;Parent=Msa0172410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
