Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040100 | XP_013469752.1 | 98.338 | 722 | 12 | 0 | 1 | 722 | 1 | 722 | 0.0 | 1470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040100 | sp|Q5ZLW3|DYM_CHICK | 31.223 | 695 | 415 | 19 | 20 | 693 | 15 | 667 | 2.71e-89 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040100 | A0A072W0G2 | 98.338 | 722 | 12 | 0 | 1 | 722 | 1 | 722 | 0.0 | 1470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028340 | Msa0040100 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0040100 | Msa0076170 | 0.812225 | 4.718621e-51 | -8.615850e-47 |
| Msa0040100 | Msa0124200 | 0.826040 | 3.373837e-54 | -8.615850e-47 |
| Msa0040100 | Msa0140880 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0040100 | Msa0168570 | 0.818604 | 1.797243e-52 | -8.615850e-47 |
| Msa0040100 | Msa0369420 | 0.821637 | 3.632072e-53 | -8.615850e-47 |
| Msa0040100 | Msa0572750 | 0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0040100 | Msa0586450 | 0.806050 | 9.929382e-50 | -8.615850e-47 |
| Msa0040100 | Msa0626460 | 0.801804 | 7.573711e-49 | -8.615850e-47 |
| Msa0040100 | Msa0661630 | 0.820510 | 6.603845e-53 | -8.615850e-47 |
| Msa0040100 | Msa0664540 | 0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0040100 | Msa0702720 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0040100 | Msa1341840 | 0.804668 | 1.933972e-49 | -8.615850e-47 |
| Msa0040100 | Msa1403710 | 0.804301 | 2.307420e-49 | -8.615850e-47 |
| Msa0040100 | Msa1440900 | 0.841215 | 5.438419e-58 | -8.615850e-47 |
| Msa0040100 | Msa1461370 | 0.823090 | 1.669780e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040100 | MtrunA17_Chr1g0204731 | 98.338 | 722 | 12 | 0 | 1 | 722 | 1 | 722 | 0.0 | 1470 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040100 | AT1G04200.1 | 66.572 | 706 | 226 | 6 | 1 | 698 | 1 | 704 | 0.0 | 939 |
| Msa0040100 | AT1G04200.3 | 66.857 | 700 | 222 | 6 | 1 | 692 | 1 | 698 | 0.0 | 938 |
| Msa0040100 | AT1G04200.2 | 65.064 | 624 | 208 | 6 | 1 | 616 | 1 | 622 | 0.0 | 795 |
Find 160 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTGCAGAAACTTGAAAA+TGG | 0.238015 | 1_1:-70084780 | Msa0040100:intron |
| TCAACAAGCTTGCGAGCTTT+TGG | 0.247107 | 1_1:-70092924 | Msa0040100:CDS |
| AGTATGAGTTGTCGGAAAAT+TGG | 0.247352 | 1_1:+70089943 | None:intergenic |
| ATCAGATACTCCGCCGTTTC+CGG | 0.250368 | 1_1:+70093046 | None:intergenic |
| TTAACAGTTAATGCCGATTC+TGG | 0.255186 | 1_1:-70087869 | Msa0040100:intron |
| TTTATTGCCATTCAGTTATT+TGG | 0.263983 | 1_1:-70090126 | Msa0040100:CDS |
| TGCTAGAATTAAGTTTAATA+AGG | 0.276337 | 1_1:+70084148 | None:intergenic |
| GTACAAATAACTAATATATT+TGG | 0.284217 | 1_1:+70084666 | None:intergenic |
| ATTTGATCTAAACGCGATTA+TGG | 0.288042 | 1_1:+70093237 | None:intergenic |
| TCCCTTTCTCATCGGAGTTT+TGG | 0.288337 | 1_1:-70092997 | Msa0040100:CDS |
| TAATTGTCAATTGTCGTTCT+TGG | 0.310408 | 1_1:-70085678 | Msa0040100:CDS |
| ACAATCAATTGCTTGCTCTA+AGG | 0.322841 | 1_1:+70089914 | None:intergenic |
| ATATTAGTTATTTGTACATA+TGG | 0.323783 | 1_1:-70084660 | Msa0040100:three_prime_UTR |
| AGCTGTACTGAAGGATGTTT+TGG | 0.330638 | 1_1:-70092109 | Msa0040100:CDS |
| AGAAATGGATTCACATCATT+TGG | 0.337198 | 1_1:+70090596 | None:intergenic |
| CAGGAGTCCATGTCTACTTC+TGG | 0.340480 | 1_1:-70092246 | Msa0040100:CDS |
| CCATCTAGCATGCTACTTGC+AGG | 0.357257 | 1_1:-70092265 | Msa0040100:CDS |
| TGAAGACTGCTATCCGCTAT+TGG | 0.357789 | 1_1:+70090074 | None:intergenic |
| CTTCTCCATCAGACTTCTCT+TGG | 0.362045 | 1_1:-70087621 | Msa0040100:CDS |
| AAATCTCGTTGCGTCTGATT+TGG | 0.366589 | 1_1:+70093157 | None:intergenic |
| CTTCTATGTGGTCCATCTCC+TGG | 0.369080 | 1_1:-70090620 | Msa0040100:CDS |
| CACCAAGACATACTCCAAAA+AGG | 0.384253 | 1_1:+70088486 | None:intergenic |
| TTTGTTGCTAATAGTAATAA+TGG | 0.384954 | 1_1:-70084193 | Msa0040100:three_prime_UTR |
| CACAACATGTCTGGCAACTT+TGG | 0.386340 | 1_1:-70086595 | Msa0040100:CDS |
| GTCCTAGGGTTCCATTCAAT+CGG | 0.402739 | 1_1:-70090403 | Msa0040100:CDS |
| TGAATATTTGTTATTCTCAA+TGG | 0.417875 | 1_1:+70089995 | None:intergenic |
| GTATGAGTTGTCGGAAAATT+GGG | 0.418061 | 1_1:+70089944 | None:intergenic |
| AATTGCAGAAACTTGAAAAT+GGG | 0.422881 | 1_1:-70084779 | Msa0040100:intron |
| TACTTCTGGTGTGCCGCCCT+TGG | 0.424143 | 1_1:-70092232 | Msa0040100:CDS |
| AATACAAGCTGCCAGACATA+TGG | 0.427398 | 1_1:+70085463 | None:intergenic |
| TCCAGTGGATTCACATTCAA+TGG | 0.429298 | 1_1:-70085188 | Msa0040100:intron |
| ACTTCTGAGTGTAGATCAAC+TGG | 0.432018 | 1_1:+70085146 | None:intergenic |
| TAAATTTCATTACCCGTCCT+AGG | 0.433481 | 1_1:-70090418 | Msa0040100:CDS |
| AGCTTCCTCTCAATGTTCAA+TGG | 0.433824 | 1_1:-70092961 | Msa0040100:CDS |
| CTAGCATCTCTAGCTACAAT+TGG | 0.435552 | 1_1:-70084131 | Msa0040100:three_prime_UTR |
| GGATAAGTTGCCCGATTGAA+TGG | 0.439502 | 1_1:+70090392 | None:intergenic |
| GCCATTGCTGCATCAAGAAA+TGG | 0.442208 | 1_1:+70090581 | None:intergenic |
| CAGAGAGTTGGTTCTGCAGC+TGG | 0.443092 | 1_1:-70090335 | Msa0040100:intron |
| CAAAAGCTTTGCAAGATGCC+TGG | 0.445218 | 1_1:+70092290 | None:intergenic |
| GCTTCTTTGTTTGATACACT+TGG | 0.446013 | 1_1:-70089748 | Msa0040100:CDS |
| AGATGTAGAAGAAATGTGTT+TGG | 0.446412 | 1_1:+70090683 | None:intergenic |
| TTGTATAGAGCTTCCAGAAT+CGG | 0.447982 | 1_1:+70087856 | None:intergenic |
| CTGACTTCCGTCATAAAAGA+TGG | 0.448275 | 1_1:+70090370 | None:intergenic |
| TTGGTCAGTTCTAGCGGTGA+AGG | 0.448891 | 1_1:-70090107 | Msa0040100:CDS |
| CCATTGAAAATCTTGTTATG+AGG | 0.450602 | 1_1:-70090843 | Msa0040100:CDS |
| TCTCGTTGCGTCTGATTTGG+TGG | 0.455300 | 1_1:+70093160 | None:intergenic |
| GAGGGGAGCACATTTCAAAA+TGG | 0.456497 | 1_1:-70084753 | Msa0040100:CDS |
| GCAAAAGACAACTCAATTGA+AGG | 0.460931 | 1_1:-70086338 | Msa0040100:CDS |
| CCTGCAAGTAGCATGCTAGA+TGG | 0.461271 | 1_1:+70092265 | None:intergenic |
| TGTCAATTGTCGTTCTTGGA+GGG | 0.461882 | 1_1:-70085674 | Msa0040100:CDS |
| TCAAAAGTGTTAGAAGAGAA+AGG | 0.468301 | 1_1:-70084276 | Msa0040100:three_prime_UTR |
| GGCCTTGCAGTATGAGTTGT+CGG | 0.470545 | 1_1:+70089935 | None:intergenic |
| GACTTCTCTTGGTTCTCTCA+TGG | 0.476180 | 1_1:-70087610 | Msa0040100:CDS |
| ACATCATTTGGTCCAGGAGA+TGG | 0.476918 | 1_1:+70090608 | None:intergenic |
| TCTTGATGCAGCAATGGCTC+AGG | 0.478233 | 1_1:-70090576 | Msa0040100:intron |
| CAATGCTAGCATTCATAAGC+TGG | 0.479153 | 1_1:-70087758 | Msa0040100:intron |
| TGTCGTTCTTGGAGGGGTGA+TGG | 0.481317 | 1_1:-70085667 | Msa0040100:CDS |
| GGAACTTCTGCCCTCAGAAT+GGG | 0.481377 | 1_1:+70084221 | None:intergenic |
| TTGAAGCACTTGATTGAAAG+TGG | 0.483841 | 1_1:-70092165 | Msa0040100:CDS |
| GCTTGTTGAACACGTTCAGC+AGG | 0.484714 | 1_1:+70092938 | None:intergenic |
| TGGTGAATTCTCGCCGGAAA+CGG | 0.485057 | 1_1:-70093059 | Msa0040100:CDS |
| CTATCTCCACACAACATGTC+TGG | 0.491940 | 1_1:-70086604 | Msa0040100:CDS |
| ATCAACTGGAAACAAAGTTA+TGG | 0.496495 | 1_1:+70085160 | None:intergenic |
| TGCCAAAACTCCGATGAGAA+AGG | 0.497393 | 1_1:+70092995 | None:intergenic |
| TTGTCAATTGTCGTTCTTGG+AGG | 0.499310 | 1_1:-70085675 | Msa0040100:CDS |
| GTCAATTGTCGTTCTTGGAG+GGG | 0.499329 | 1_1:-70085673 | Msa0040100:CDS |
| ATGGATGCTCAAAGAGTTGA+TGG | 0.501521 | 1_1:-70085733 | Msa0040100:CDS |
| TCCGAGGCAGTGCATAAGTC+AGG | 0.502883 | 1_1:+70086134 | None:intergenic |
| GCCGCCCTTGGTTTATGAAA+AGG | 0.503373 | 1_1:-70092220 | Msa0040100:CDS |
| AGGAACTTCTGCCCTCAGAA+TGG | 0.506957 | 1_1:+70084220 | None:intergenic |
| CAAAAGTGTTAGAAGAGAAA+GGG | 0.510151 | 1_1:-70084275 | Msa0040100:three_prime_UTR |
| GGCAGCTTGTATTATCCCAC+TGG | 0.510955 | 1_1:-70085453 | Msa0040100:intron |
| CTGCATTGTGTGAAAATTCG+CGG | 0.511649 | 1_1:+70093201 | None:intergenic |
| TATGGATCAAGCTGATACTC+AGG | 0.512445 | 1_1:+70084717 | None:intergenic |
| AGTATAATTTGTCTAAACTA+CGG | 0.514372 | 1_1:-70087563 | Msa0040100:CDS |
| GCCAAAACTCCGATGAGAAA+GGG | 0.514991 | 1_1:+70092996 | None:intergenic |
| TTGCAGGACAGTGCTCTGGT+TGG | 0.519435 | 1_1:-70090464 | Msa0040100:intron |
| GGATTCACATCATTTGGTCC+AGG | 0.520084 | 1_1:+70090602 | None:intergenic |
| TGTACTAATACAAGCAGCTA+TGG | 0.520713 | 1_1:+70084699 | None:intergenic |
| AAACTTGAAAATGGGGTGGA+GGG | 0.521462 | 1_1:-70084771 | Msa0040100:CDS |
| TTGGAGGGGTGATGGAATGA+AGG | 0.521901 | 1_1:-70085659 | Msa0040100:intron |
| AAATTCGCGGAGAGATGAAA+AGG | 0.522249 | 1_1:+70093214 | None:intergenic |
| GTATAATTTGTCTAAACTAC+GGG | 0.522855 | 1_1:-70087562 | Msa0040100:intron |
| TCCATTTCTTGATGCAGCAA+TGG | 0.525469 | 1_1:-70090582 | Msa0040100:CDS |
| TCTGGCAACTTTGGCTAACA+TGG | 0.526191 | 1_1:-70086586 | Msa0040100:CDS |
| TCCTAGGGTTCCATTCAATC+GGG | 0.528395 | 1_1:-70090402 | Msa0040100:CDS |
| CTGCTTTACTCGTTGTTGCA+AGG | 0.530765 | 1_1:-70088517 | Msa0040100:CDS |
| AACTTGAAAATGGGGTGGAG+GGG | 0.530844 | 1_1:-70084770 | Msa0040100:CDS |
| AAGCGTGGATGACTCTTGTA+TGG | 0.535790 | 1_1:+70085954 | None:intergenic |
| AAATTTCATTACCCGTCCTA+GGG | 0.535814 | 1_1:-70090417 | Msa0040100:CDS |
| GAACTGACCAAATAACTGAA+TGG | 0.537533 | 1_1:+70090119 | None:intergenic |
| GTATCAAACAAAGAAGCAAA+AGG | 0.539005 | 1_1:+70089754 | None:intergenic |
| AGATATTGACGGGTGTTCCA+TGG | 0.539663 | 1_1:-70087656 | Msa0040100:CDS |
| CTACAGGTGCTTAGCTGATG+AGG | 0.541613 | 1_1:-70088551 | Msa0040100:intron |
| GAGAACCAAGAGAAGTCTGA+TGG | 0.546097 | 1_1:+70087616 | None:intergenic |
| GGATATCTCATCTTCATCTA+CGG | 0.547062 | 1_1:+70084536 | None:intergenic |
| CTCGTTGCGTCTGATTTGGT+GGG | 0.548754 | 1_1:+70093161 | None:intergenic |
| TTCTTTCTGAATGGGTTCGG+TGG | 0.550784 | 1_1:-70093101 | Msa0040100:exon |
| CATATAATATGTGAGTGTAA+AGG | 0.553230 | 1_1:-70084565 | Msa0040100:three_prime_UTR |
| CTCAAAGAGTTGATGGTGAC+TGG | 0.559695 | 1_1:-70085726 | Msa0040100:CDS |
| ATACAAGCTGCCAGACATAT+GGG | 0.560101 | 1_1:+70085464 | None:intergenic |
| TGGTCAGTTCTAGCGGTGAA+GGG | 0.562021 | 1_1:-70090106 | Msa0040100:CDS |
| GCGTCAACGCCGCGTAAGCG+TGG | 0.562192 | 1_1:-70093079 | Msa0040100:CDS |
| TGCGTGAGAGCATATCGAAA+AGG | 0.562962 | 1_1:+70086514 | None:intergenic |
| AAACGGCGGAGTATCTGATC+GGG | 0.563126 | 1_1:-70093042 | Msa0040100:CDS |
| GTCAGCGCTTATTCAATACA+TGG | 0.564400 | 1_1:+70084515 | None:intergenic |
| GAAACTTGAAAATGGGGTGG+AGG | 0.566467 | 1_1:-70084772 | Msa0040100:CDS |
| TTAATAAGGAAACTAACTAA+AGG | 0.568253 | 1_1:+70084162 | None:intergenic |
| TCCTGACTTATGCACTGCCT+CGG | 0.568559 | 1_1:-70086135 | Msa0040100:CDS |
| TAGTGTATGCAGTAATGCAC+AGG | 0.571234 | 1_1:-70085992 | Msa0040100:CDS |
| ATAAATGGACAGATATTGAC+GGG | 0.571914 | 1_1:-70087666 | Msa0040100:intron |
| TGACTTCCGTCATAAAAGAT+GGG | 0.573912 | 1_1:+70090371 | None:intergenic |
| CTCTATACAATGCTCAAAGT+AGG | 0.575529 | 1_1:-70087843 | Msa0040100:CDS |
| TGCACTGCCTCGGAATCCTG+AGG | 0.576677 | 1_1:-70086125 | Msa0040100:intron |
| TATAAATGGACAGATATTGA+CGG | 0.577847 | 1_1:-70087667 | Msa0040100:intron |
| ATGCATATGCACTCAAACGA+TGG | 0.579561 | 1_1:+70086553 | None:intergenic |
| GACAATTGACAATTATCACT+TGG | 0.582059 | 1_1:+70085686 | None:intergenic |
| AGTAGTGTGCTACAGAGAGT+TGG | 0.584242 | 1_1:-70090347 | Msa0040100:CDS |
| GCAGGCCATTGAACATTGAG+AGG | 0.586568 | 1_1:+70092956 | None:intergenic |
| AGATTTACACCGACTTCTTG+AGG | 0.588529 | 1_1:-70086183 | Msa0040100:CDS |
| GATTGAATGGAACCCTAGGA+CGG | 0.589445 | 1_1:+70090405 | None:intergenic |
| TGAGTCGTTCCCTTTCTCAT+CGG | 0.590887 | 1_1:-70093005 | Msa0040100:CDS |
| AGTTATTTGGTCAGTTCTAG+CGG | 0.592547 | 1_1:-70090113 | Msa0040100:CDS |
| AAGGAGCTTCTTCGAAACGA+AGG | 0.597622 | 1_1:+70093349 | None:intergenic |
| GAAACGGCGGAGTATCTGAT+CGG | 0.598466 | 1_1:-70093043 | Msa0040100:CDS |
| GCTACAATTGGAATAAACAA+TGG | 0.601122 | 1_1:-70084119 | Msa0040100:three_prime_UTR |
| AAACAGCTTTGTAGATGATG+TGG | 0.603825 | 1_1:-70086315 | Msa0040100:intron |
| CGGCACACCAGAAGTAGACA+TGG | 0.605343 | 1_1:+70092239 | None:intergenic |
| CAAAAGGCAACTTTATGTGT+CGG | 0.607785 | 1_1:+70089770 | None:intergenic |
| ATTGAATGGAACCCTAGGAC+GGG | 0.610890 | 1_1:+70090406 | None:intergenic |
| GTATGCAGTAATGCACAGGC+AGG | 0.611073 | 1_1:-70085988 | Msa0040100:CDS |
| TTCGATCAACAGCATTAGTG+AGG | 0.611239 | 1_1:+70084430 | None:intergenic |
| TTCCGACAACTCATACTGCA+AGG | 0.614177 | 1_1:-70089937 | Msa0040100:CDS |
| ATGTCAACTCAGCTTCTATG+TGG | 0.615467 | 1_1:-70090632 | Msa0040100:CDS |
| GCCCGATTGAATGGAACCCT+AGG | 0.619396 | 1_1:+70090401 | None:intergenic |
| GAGAATTCACCACGCTTACG+CGG | 0.624617 | 1_1:+70093070 | None:intergenic |
| TAGTACAAGCCTCAAGAAGT+CGG | 0.626371 | 1_1:+70086174 | None:intergenic |
| TGAATTCTCGCCGGAAACGG+CGG | 0.628376 | 1_1:-70093056 | Msa0040100:CDS |
| AGAAGACGTTCTTTGTACCA+TGG | 0.635677 | 1_1:+70087639 | None:intergenic |
| AATCAAACCTCAGGATTCCG+AGG | 0.640879 | 1_1:+70086118 | None:intergenic |
| GCACTCAAACGATGGACATG+AGG | 0.645187 | 1_1:+70086561 | None:intergenic |
| GCTGCTAATGCAGTGTACAT+CGG | 0.647239 | 1_1:-70092198 | Msa0040100:CDS |
| TCATAAATGTGCTGTGAGTG+AGG | 0.652275 | 1_1:-70090027 | Msa0040100:CDS |
| TAAGCGTGGTGAATTCTCGC+CGG | 0.654399 | 1_1:-70093065 | Msa0040100:CDS |
| GCGGACTGATATAGACACAT+TGG | 0.655895 | 1_1:-70088464 | Msa0040100:intron |
| GTGGATCGTGTAGACATCGA+GGG | 0.661731 | 1_1:-70089808 | Msa0040100:CDS |
| TCAAGTAGTTCATGGAAGCG+TGG | 0.667155 | 1_1:+70085939 | None:intergenic |
| GCAGAAACTTGAAAATGGGG+TGG | 0.670526 | 1_1:-70084775 | Msa0040100:intron |
| TGCTTGTATTAGTACAAATG+TGG | 0.670885 | 1_1:-70084692 | Msa0040100:three_prime_UTR |
| GGGTGATGAAGCTGTACTGA+AGG | 0.671246 | 1_1:-70092118 | Msa0040100:CDS |
| TTATAGCATCAGTAGAAGTG+AGG | 0.679234 | 1_1:-70090807 | Msa0040100:intron |
| GCAACAACGAGTAAAGCAGT+AGG | 0.683317 | 1_1:+70088521 | None:intergenic |
| GTAACTTAGATATAACACTA+CGG | 0.691773 | 1_1:+70084321 | None:intergenic |
| ATTGCAGAAACTTGAAAATG+GGG | 0.695036 | 1_1:-70084778 | Msa0040100:intron |
| AAGTTGCCAGACATGTTGTG+TGG | 0.696150 | 1_1:+70086598 | None:intergenic |
| AGTGGATCGTGTAGACATCG+AGG | 0.705403 | 1_1:-70089809 | Msa0040100:CDS |
| AGGGTCAAGAAATCCAATAG+CGG | 0.724780 | 1_1:-70090087 | Msa0040100:CDS |
| ATCGAGGGCAATGCACACAG+TGG | 0.738266 | 1_1:-70089793 | Msa0040100:CDS |
| AACAGCATTAGTGAGGACTG+AGG | 0.749833 | 1_1:+70084437 | None:intergenic |
| TGAACAAGAGAGACACCCTG+AGG | 0.796957 | 1_1:-70085497 | Msa0040100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATTAACTTAAAAATA+AGG | + | chr1_1:70087951-70087970 | None:intergenic | 10.0% |
| !! | TGTTTGTTTAAAAAATATAA+GGG | + | chr1_1:70089147-70089166 | None:intergenic | 10.0% |
| !! | ACTTCTAAATATATAAATTA+GGG | + | chr1_1:70089367-70089386 | None:intergenic | 10.0% |
| !! | TATATATAATAAAGTAGAAA+GGG | + | chr1_1:70089996-70090015 | None:intergenic | 10.0% |
| !! | ATATATATAATAAAGTAGAA+AGG | + | chr1_1:70089997-70090016 | None:intergenic | 10.0% |
| !!! | TTTAATCTATTTGATTTGTA+TGG | - | chr1_1:70085042-70085061 | Msa0040100:intron | 15.0% |
| !!! | TTAATCTATTTGATTTGTAT+GGG | - | chr1_1:70085043-70085062 | Msa0040100:intron | 15.0% |
| !! | ACTACAATAATAATAGAAAA+AGG | + | chr1_1:70086768-70086787 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | + | chr1_1:70087920-70087939 | None:intergenic | 15.0% |
| !!! | TATGATTTTACTTTAAAAGA+GGG | - | chr1_1:70088203-70088222 | Msa0040100:intron | 15.0% |
| !! | GTTTGTTTAAAAAATATAAG+GGG | + | chr1_1:70089146-70089165 | None:intergenic | 15.0% |
| !! | GTGTTTGTTTAAAAAATATA+AGG | + | chr1_1:70089148-70089167 | None:intergenic | 15.0% |
| !! | CTTCTAAATATATAAATTAG+GGG | + | chr1_1:70089366-70089385 | None:intergenic | 15.0% |
| !! | GACTTCTAAATATATAAATT+AGG | + | chr1_1:70089368-70089387 | None:intergenic | 15.0% |
| !! | TAACTAATAAGCATATTAAT+TGG | + | chr1_1:70090084-70090103 | None:intergenic | 15.0% |
| !! | ATATAATATATATACCATCT+TGG | - | chr1_1:70091180-70091199 | Msa0040100:intron | 15.0% |
| !! | AAAAAATGATGTAAAAAAGA+TGG | + | chr1_1:70091656-70091675 | None:intergenic | 15.0% |
| !! | AATATATCATAGAATTTAAG+AGG | - | chr1_1:70091880-70091899 | Msa0040100:intron | 15.0% |
| !!! | TTATATTATTGCTTTTATGA+TGG | - | chr1_1:70092468-70092487 | Msa0040100:intron | 15.0% |
| !! | GTACAAATAACTAATATATT+TGG | + | chr1_1:70092808-70092827 | None:intergenic | 15.0% |
| !! | ATATTAGTTATTTGTACATA+TGG | - | chr1_1:70092811-70092830 | Msa0040100:intron | 15.0% |
| !! | CTAATGCTATTATCAAAAAA+TGG | + | chr1_1:70084606-70084625 | None:intergenic | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | - | chr1_1:70085884-70085903 | Msa0040100:intron | 20.0% |
| !! | TAGCATAATATTCATGTAAA+CGG | - | chr1_1:70086231-70086250 | Msa0040100:intron | 20.0% |
| !! | ATAACTCAATGATAATTAAC+CGG | + | chr1_1:70086716-70086735 | None:intergenic | 20.0% |
| !! | CAACAACAACAATAATAAAA+AGG | + | chr1_1:70087225-70087244 | None:intergenic | 20.0% |
| !!! | TGAATATTTGTTATTCTCAA+TGG | + | chr1_1:70087479-70087498 | None:intergenic | 20.0% |
| !!! | TGCTTTTATTAATAGAATCA+AGG | - | chr1_1:70087816-70087835 | Msa0040100:CDS | 20.0% |
| !!! | GCTTTTATTAATAGAATCAA+GGG | - | chr1_1:70087817-70087836 | Msa0040100:CDS | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr1_1:70087860-70087879 | None:intergenic | 20.0% |
| !!! | AATTGAAGGAAAATTTTAGA+GGG | + | chr1_1:70087891-70087910 | None:intergenic | 20.0% |
| !!! | AAATTGAAGGAAAATTTTAG+AGG | + | chr1_1:70087892-70087911 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | + | chr1_1:70087921-70087940 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | - | chr1_1:70087924-70087943 | Msa0040100:intron | 20.0% |
| !!! | GTATGATTTTACTTTAAAAG+AGG | - | chr1_1:70088202-70088221 | Msa0040100:intron | 20.0% |
| !!! | AAAAATTTCATCTTCACTTT+TGG | + | chr1_1:70088230-70088249 | None:intergenic | 20.0% |
| !!! | TGAAGATGAAATTTTTTTGA+GGG | - | chr1_1:70088234-70088253 | Msa0040100:intron | 20.0% |
| !!! | AAGTTGAAGAAATTTTTTAG+AGG | - | chr1_1:70088262-70088281 | Msa0040100:intron | 20.0% |
| !!! | AGTTGAAGAAATTTTTTAGA+GGG | - | chr1_1:70088263-70088282 | Msa0040100:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | - | chr1_1:70088294-70088313 | Msa0040100:intron | 20.0% |
| !!! | AACATGTTAATTCTATTTTG+CGG | + | chr1_1:70088352-70088371 | None:intergenic | 20.0% |
| !!! | TCTTTGATATAAGTATTGAT+TGG | + | chr1_1:70088499-70088518 | None:intergenic | 20.0% |
| !! | ATTTCTCTTATGAAAGAAAA+TGG | - | chr1_1:70089049-70089068 | Msa0040100:intron | 20.0% |
| !! | AATGTATCTTGTAAAAATAG+AGG | + | chr1_1:70089247-70089266 | None:intergenic | 20.0% |
| !!! | TCTATTTTTACAAGATACAT+TGG | - | chr1_1:70089246-70089265 | Msa0040100:intron | 20.0% |
| !! | ATATATATTAGAGAAAGTGA+GGG | - | chr1_1:70089334-70089353 | Msa0040100:intron | 20.0% |
| !! | TTAAGTCATTGTAAATCATA+TGG | - | chr1_1:70089482-70089501 | Msa0040100:intron | 20.0% |
| !!! | AGGTTAATTTGGTATATAAA+TGG | - | chr1_1:70089790-70089809 | Msa0040100:CDS | 20.0% |
| !!! | AGTATAATTTGTCTAAACTA+CGG | - | chr1_1:70089908-70089927 | Msa0040100:intron | 20.0% |
| !! | CTACTATTATCAGTATTTAT+TGG | - | chr1_1:70090119-70090138 | Msa0040100:CDS | 20.0% |
| !!! | TATTGACCTTTATGTTTTAT+GGG | - | chr1_1:70090166-70090185 | Msa0040100:intron | 20.0% |
| !!! | AGAAAATTGGTATCTTTTTA+AGG | - | chr1_1:70090553-70090572 | Msa0040100:intron | 20.0% |
| !!! | CATTTTTTTACATAACAGAA+TGG | + | chr1_1:70090838-70090857 | None:intergenic | 20.0% |
| !! | CTGTTATGTAAAAAAATGAT+AGG | - | chr1_1:70090840-70090859 | Msa0040100:CDS | 20.0% |
| !!! | CTAAAAGGTATAAATTTGAA+TGG | + | chr1_1:70091019-70091038 | None:intergenic | 20.0% |
| !! | AGAATACTCAATTTAGAAAA+AGG | + | chr1_1:70091245-70091264 | None:intergenic | 20.0% |
| !!! | TTCTAAATTGAGTATTCTTT+TGG | - | chr1_1:70091247-70091266 | Msa0040100:intron | 20.0% |
| !!! | AACGTAAATTTTAACTGTTT+TGG | + | chr1_1:70091430-70091449 | None:intergenic | 20.0% |
| !! | AACAGTTAAAATTTACGTTA+CGG | - | chr1_1:70091431-70091450 | Msa0040100:intron | 20.0% |
| !!! | TGTGACTGTATTTTTTTTTT+TGG | - | chr1_1:70091922-70091941 | Msa0040100:intron | 20.0% |
| !! | TACTATTAGCAACAAAAAAA+AGG | + | chr1_1:70093274-70093293 | None:intergenic | 20.0% |
| !! | TTTGTTGCTAATAGTAATAA+TGG | - | chr1_1:70093278-70093297 | Msa0040100:five_prime_UTR | 20.0% |
| !! | TTAATAAGGAAACTAACTAA+AGG | + | chr1_1:70093312-70093331 | None:intergenic | 20.0% |
| !! | TGCTAGAATTAAGTTTAATA+AGG | + | chr1_1:70093326-70093345 | None:intergenic | 20.0% |
| ! | CCATTCAGAAAGAAAAAAAA+CGG | + | chr1_1:70084364-70084383 | None:intergenic | 25.0% |
| !!! | CGTTTTTTTTCTTTCTGAAT+GGG | - | chr1_1:70084362-70084381 | Msa0040100:three_prime_UTR | 25.0% |
| !! | TCATCTTTTCAATGTTTTAC+CGG | + | chr1_1:70084766-70084785 | None:intergenic | 25.0% |
| !!! | TTGTGTTGTTTCAAGATATT+TGG | - | chr1_1:70084887-70084906 | Msa0040100:intron | 25.0% |
| ! | GAAATGTGATTATAACATCA+AGG | - | chr1_1:70084953-70084972 | Msa0040100:intron | 25.0% |
| !!! | GATTTTTAGAGAAGTGATTT+TGG | - | chr1_1:70085007-70085026 | Msa0040100:intron | 25.0% |
| !! | TCGAATTCTTATGTGAATTT+TGG | - | chr1_1:70085118-70085137 | Msa0040100:intron | 25.0% |
| ! | ATGACAATGATATGTATGTA+TGG | + | chr1_1:70085525-70085544 | None:intergenic | 25.0% |
| ! | ATGACAATGATATGTATGTA+TGG | + | chr1_1:70085525-70085544 | None:intergenic | 25.0% |
| !!! | TATAACTAGGTTTTAAGGAA+GGG | + | chr1_1:70086084-70086103 | None:intergenic | 25.0% |
| !!! | TTATAACTAGGTTTTAAGGA+AGG | + | chr1_1:70086085-70086104 | None:intergenic | 25.0% |
| ! | TCCTTAAAACCTAGTTATAA+AGG | - | chr1_1:70086085-70086104 | Msa0040100:intron | 25.0% |
| ! | CCTTAAAACCTAGTTATAAA+GGG | - | chr1_1:70086086-70086105 | Msa0040100:intron | 25.0% |
| ! | CTTAAAACCTAGTTATAAAG+GGG | - | chr1_1:70086087-70086106 | Msa0040100:intron | 25.0% |
| ! | GAGTATTTATTTAAGTGGTT+TGG | + | chr1_1:70086119-70086138 | None:intergenic | 25.0% |
| ! | AAATCATAAATGCAACTGAT+AGG | + | chr1_1:70086199-70086218 | None:intergenic | 25.0% |
| !! | ATCAGTTGCATTTATGATTT+TGG | - | chr1_1:70086199-70086218 | Msa0040100:CDS | 25.0% |
| !! | TCAGTTGCATTTATGATTTT+GGG | - | chr1_1:70086200-70086219 | Msa0040100:intron | 25.0% |
| !! | TTTCTTTCTCTTGTTTGAAT+TGG | - | chr1_1:70086331-70086350 | Msa0040100:CDS | 25.0% |
| ! | TAAACCAAAAGATACTTCAA+AGG | + | chr1_1:70086406-70086425 | None:intergenic | 25.0% |
| ! | TTAAGAAATCTGAAAAACAC+TGG | + | chr1_1:70086442-70086461 | None:intergenic | 25.0% |
| ! | TAAACCAAAAGATACTTCAA+AGG | + | chr1_1:70086406-70086425 | None:intergenic | 25.0% |
| ! | TTAAGAAATCTGAAAAACAC+TGG | + | chr1_1:70086442-70086461 | None:intergenic | 25.0% |
| ! | TAGAAAAAGGAAAAATTGTC+AGG | + | chr1_1:70086755-70086774 | None:intergenic | 25.0% |
| ! | ATTTGCAGATAGTAAATAAC+AGG | - | chr1_1:70086967-70086986 | Msa0040100:intron | 25.0% |
| !!! | AAGATTTTTGTTTGGAAAGT+TGG | - | chr1_1:70087267-70087286 | Msa0040100:intron | 25.0% |
| ! | AAAGTTGGAACTTATTTGAT+AGG | - | chr1_1:70087282-70087301 | Msa0040100:intron | 25.0% |
| ! | TTTATTGCCATTCAGTTATT+TGG | - | chr1_1:70087345-70087364 | Msa0040100:intron | 25.0% |
| !!! | ACCATTTTAATTGATTGAGA+AGG | - | chr1_1:70087610-70087629 | Msa0040100:CDS | 25.0% |
| !! | TCAAGGGTTAAATATGTTTT+TGG | - | chr1_1:70087833-70087852 | Msa0040100:CDS | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr1_1:70087861-70087880 | None:intergenic | 25.0% |
| !!! | GTGAAGATGAAATTTTTTTG+AGG | - | chr1_1:70088233-70088252 | Msa0040100:intron | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | - | chr1_1:70088293-70088312 | Msa0040100:intron | 25.0% |
| !!! | TCTAGGGTTAAATATGTTTT+TGG | + | chr1_1:70088321-70088340 | None:intergenic | 25.0% |
| ! | TAATAAGATTGATCTACAAC+TGG | + | chr1_1:70088437-70088456 | None:intergenic | 25.0% |
| ! | CAATACTTATATCAAAGAGA+AGG | - | chr1_1:70088501-70088520 | Msa0040100:CDS | 25.0% |
| ! | ACTGTAAAACATACATGAAA+CGG | + | chr1_1:70088579-70088598 | None:intergenic | 25.0% |
| !! | TTTAATACTTTCTTGGTTTG+AGG | - | chr1_1:70088665-70088684 | Msa0040100:intron | 25.0% |
| !!! | TTTGTTGTTTTTAAAACACC+TGG | - | chr1_1:70088883-70088902 | Msa0040100:intron | 25.0% |
| ! | TACGACAAATAAGTGAATAA+GGG | + | chr1_1:70089177-70089196 | None:intergenic | 25.0% |
| !! | ATTTTTACAAGATACATTGG+AGG | - | chr1_1:70089249-70089268 | Msa0040100:intron | 25.0% |
| ! | CATATATATTAGAGAAAGTG+AGG | - | chr1_1:70089333-70089352 | Msa0040100:intron | 25.0% |
| ! | TTAGTCATTCTAGATGTTAT+CGG | + | chr1_1:70089514-70089533 | None:intergenic | 25.0% |
| ! | GTCATAAGATAAACAAGAAA+CGG | + | chr1_1:70089552-70089571 | None:intergenic | 25.0% |
| ! | GATTGTGTTAAAGGTTAATT+TGG | - | chr1_1:70089779-70089798 | Msa0040100:CDS | 25.0% |
| ! | TATAAATGGACAGATATTGA+CGG | - | chr1_1:70089804-70089823 | Msa0040100:CDS | 25.0% |
| !! | GTATAATTTGTCTAAACTAC+GGG | - | chr1_1:70089909-70089928 | Msa0040100:intron | 25.0% |
| ! | TAATGCAAAATCTAATCCAA+TGG | - | chr1_1:70090058-70090077 | Msa0040100:CDS | 25.0% |
| ! | CTATTATCAGTATTTATTGG+TGG | - | chr1_1:70090122-70090141 | Msa0040100:CDS | 25.0% |
| !! | CTATTGACCTTTATGTTTTA+TGG | - | chr1_1:70090165-70090184 | Msa0040100:intron | 25.0% |
| ! | GTATTTCCCATAAAACATAA+AGG | + | chr1_1:70090175-70090194 | None:intergenic | 25.0% |
| ! | ATGGTTTACTGTAATAAACT+TGG | - | chr1_1:70090282-70090301 | Msa0040100:intron | 25.0% |
| ! | AAAATAGCACTAGAATTTCA+AGG | + | chr1_1:70090328-70090347 | None:intergenic | 25.0% |
| !!! | AGTGCTATTTTAGAAATGTA+AGG | - | chr1_1:70090337-70090356 | Msa0040100:CDS | 25.0% |
| ! | AGATGTTGAAAATATGTTCA+CGG | + | chr1_1:70090375-70090394 | None:intergenic | 25.0% |
| !! | CATCTTAAATTCAAGTTTCA+AGG | - | chr1_1:70090390-70090409 | Msa0040100:CDS | 25.0% |
| ! | ACTGACAGAAAATTTACATT+TGG | - | chr1_1:70090580-70090599 | Msa0040100:CDS | 25.0% |
| ! | CTGACAGAAAATTTACATTT+GGG | - | chr1_1:70090581-70090600 | Msa0040100:CDS | 25.0% |
| ! | ATAAACTACTTGTGTAAACA+AGG | + | chr1_1:70090763-70090782 | None:intergenic | 25.0% |
| ! | TTACAAAGGTAAAGAAAGAA+GGG | + | chr1_1:70090992-70091011 | None:intergenic | 25.0% |
| ! | ATTACAAAGGTAAAGAAAGA+AGG | + | chr1_1:70090993-70091012 | None:intergenic | 25.0% |
| ! | ATTTGAATGGTACATTACAA+AGG | + | chr1_1:70091006-70091025 | None:intergenic | 25.0% |
| !!! | AAATGTTTTCAAGTAGTTCA+TGG | + | chr1_1:70091543-70091562 | None:intergenic | 25.0% |
| ! | AGAATTTGCAAGGTTTAAAA+GGG | + | chr1_1:70091615-70091634 | None:intergenic | 25.0% |
| ! | TAGAATTTGCAAGGTTTAAA+AGG | + | chr1_1:70091616-70091635 | None:intergenic | 25.0% |
| ! | TGTATCTATTGAATATTTGC+AGG | - | chr1_1:70091692-70091711 | Msa0040100:intron | 25.0% |
| !!! | AGATTTTTTCAATACTCGTA+TGG | - | chr1_1:70091719-70091738 | Msa0040100:intron | 25.0% |
| ! | GGAAATAATATTGTGATTTG+TGG | - | chr1_1:70091841-70091860 | Msa0040100:intron | 25.0% |
| ! | TTCTATGATATATTCCGTAA+TGG | + | chr1_1:70091874-70091893 | None:intergenic | 25.0% |
| ! | GTTAAGTGTAAAATATTGAC+TGG | + | chr1_1:70092085-70092104 | None:intergenic | 25.0% |
| !! | TGAAAAAAATATAGCGGAAA+AGG | + | chr1_1:70092229-70092248 | None:intergenic | 25.0% |
| !!! | ACTGCATTTTTTTTCTTTCT+TGG | - | chr1_1:70092426-70092445 | Msa0040100:intron | 25.0% |
| !!! | CTGCATTTTTTTTCTTTCTT+GGG | - | chr1_1:70092427-70092446 | Msa0040100:intron | 25.0% |
| ! | AATTGCAGAAACTTGAAAAT+GGG | - | chr1_1:70092692-70092711 | Msa0040100:intron | 25.0% |
| ! | CATATAATATGTGAGTGTAA+AGG | - | chr1_1:70092906-70092925 | Msa0040100:intron | 25.0% |
| ! | GTAACTTAGATATAACACTA+CGG | + | chr1_1:70093153-70093172 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTGAACATCTCGT+TGG | + | chr1_1:70084212-70084231 | None:intergenic | 30.0% |
| ATTTGATCTAAACGCGATTA+TGG | + | chr1_1:70084237-70084256 | None:intergenic | 30.0% | |
| !!! | CCGTTTTTTTTCTTTCTGAA+TGG | - | chr1_1:70084361-70084380 | Msa0040100:three_prime_UTR | 30.0% |
| !! | TTTTTCTTTCTGAATGGGTT+CGG | - | chr1_1:70084367-70084386 | Msa0040100:three_prime_UTR | 30.0% |
| TCAAAATGATGCTAATAGCA+AGG | - | chr1_1:70084687-70084706 | Msa0040100:three_prime_UTR | 30.0% | |
| ! | CAGTTGTATCTATCTTTTGA+GGG | - | chr1_1:70085333-70085352 | Msa0040100:intron | 30.0% |
| AGAAGTTAGAACCATGAATT+TGG | - | chr1_1:70085428-70085447 | Msa0040100:intron | 30.0% | |
| GAAGTTAGAACCATGAATTT+GGG | - | chr1_1:70085429-70085448 | Msa0040100:intron | 30.0% | |
| AACGATAATTATAGCGTGTT+TGG | + | chr1_1:70085472-70085491 | None:intergenic | 30.0% | |
| !!! | TGAACTGTTGTTTTCTCTTT+AGG | - | chr1_1:70085545-70085564 | Msa0040100:intron | 30.0% |
| TTACACGAATTATGTGACTA+TGG | + | chr1_1:70085614-70085633 | None:intergenic | 30.0% | |
| TCACATAATTCGTGTAATCA+AGG | - | chr1_1:70085617-70085636 | Msa0040100:intron | 30.0% | |
| CACATAATTCGTGTAATCAA+GGG | - | chr1_1:70085618-70085637 | Msa0040100:intron | 30.0% | |
| GAAACTTGGTAGAAGAAATT+AGG | - | chr1_1:70085840-70085859 | Msa0040100:intron | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | - | chr1_1:70085906-70085925 | Msa0040100:intron | 30.0% | |
| TTATTGCTGATAAGTATCCA+AGG | - | chr1_1:70086048-70086067 | Msa0040100:intron | 30.0% | |
| ! | CCCTTTATAACTAGGTTTTA+AGG | + | chr1_1:70086089-70086108 | None:intergenic | 30.0% |
| ! | CGGTAGAGTATTTATTTAAG+TGG | + | chr1_1:70086124-70086143 | None:intergenic | 30.0% |
| TGATAGGAAATTGGGTATTA+GGG | + | chr1_1:70086183-70086202 | None:intergenic | 30.0% | |
| AATGCAACTGATAGGAAATT+GGG | + | chr1_1:70086191-70086210 | None:intergenic | 30.0% | |
| AAATGCAACTGATAGGAAAT+TGG | + | chr1_1:70086192-70086211 | None:intergenic | 30.0% | |
| ACATCACATCAAATGCAATA+AGG | + | chr1_1:70086298-70086317 | None:intergenic | 30.0% | |
| ATACTTCAAAGGAGAAAAGA+AGG | + | chr1_1:70086395-70086414 | None:intergenic | 30.0% | |
| !!! | TTCTCCTTTGAAGTATCTTT+TGG | - | chr1_1:70086399-70086418 | Msa0040100:intron | 30.0% |
| AAGAAAAAAAACGAATCGCA+TGG | + | chr1_1:70086371-70086390 | None:intergenic | 30.0% | |
| ATACTTCAAAGGAGAAAAGA+AGG | + | chr1_1:70086395-70086414 | None:intergenic | 30.0% | |
| !!! | TTCTCCTTTGAAGTATCTTT+TGG | - | chr1_1:70086399-70086418 | Msa0040100:intron | 30.0% |
| ! | CCTCATAACAAGATTTTCAA+TGG | + | chr1_1:70086631-70086650 | None:intergenic | 30.0% |
| ! | CCATTGAAAATCTTGTTATG+AGG | - | chr1_1:70086628-70086647 | Msa0040100:intron | 30.0% |
| AGATGTAGAAGAAATGTGTT+TGG | + | chr1_1:70086791-70086810 | None:intergenic | 30.0% | |
| ! | AGAAATGGATTCACATCATT+TGG | + | chr1_1:70086878-70086897 | None:intergenic | 30.0% |
| ATAACAGGTTAGTGCATTAT+TGG | - | chr1_1:70086982-70087001 | Msa0040100:intron | 30.0% | |
| ! | ACTTATCCCATCTTTTATGA+CGG | - | chr1_1:70087094-70087113 | Msa0040100:intron | 30.0% |
| ! | ATTGCTGCAAGATTTTTGTT+TGG | - | chr1_1:70087259-70087278 | Msa0040100:intron | 30.0% |
| ! | ATAAAACGATATTTGCTGCA+AGG | + | chr1_1:70087330-70087349 | None:intergenic | 30.0% |
| GCCTTCTCAATCAATTAAAA+TGG | + | chr1_1:70087614-70087633 | None:intergenic | 30.0% | |
| GTATCAAACAAAGAAGCAAA+AGG | + | chr1_1:70087720-70087739 | None:intergenic | 30.0% | |
| TTGTCAAACACATATACATG+CGG | + | chr1_1:70087764-70087783 | None:intergenic | 30.0% | |
| TTATAGGGACTAGAAATTGA+AGG | + | chr1_1:70087905-70087924 | None:intergenic | 30.0% | |
| TACTTATATCAAAGAGAAGG+AGG | - | chr1_1:70088504-70088523 | Msa0040100:CDS | 30.0% | |
| ACTTATATCAAAGAGAAGGA+GGG | - | chr1_1:70088505-70088524 | Msa0040100:CDS | 30.0% | |
| TAAAACATACATGAAACGGA+AGG | + | chr1_1:70088575-70088594 | None:intergenic | 30.0% | |
| ! | TGTTTTACAGTCAGACATTA+TGG | - | chr1_1:70088588-70088607 | Msa0040100:intron | 30.0% |
| ACACTTATCACAAAACTAGA+AGG | + | chr1_1:70088713-70088732 | None:intergenic | 30.0% | |
| ACAAAATATCCAAAGTGGAA+AGG | + | chr1_1:70088780-70088799 | None:intergenic | 30.0% | |
| TGTACACAAAATATCCAAAG+TGG | + | chr1_1:70088785-70088804 | None:intergenic | 30.0% | |
| ATTGCAATTAGTATGAGTGT+CGG | + | chr1_1:70088841-70088860 | None:intergenic | 30.0% | |
| TCCCTTGAGATATCTTTAAA+TGG | - | chr1_1:70089112-70089131 | Msa0040100:intron | 30.0% | |
| GCCATTTAAAGATATCTCAA+GGG | + | chr1_1:70089116-70089135 | None:intergenic | 30.0% | |
| ! | TGCCATTTAAAGATATCTCA+AGG | + | chr1_1:70089117-70089136 | None:intergenic | 30.0% |
| CTACGACAAATAAGTGAATA+AGG | + | chr1_1:70089178-70089197 | None:intergenic | 30.0% | |
| GTATCGTTTGACATATCTAA+GGG | + | chr1_1:70089218-70089237 | None:intergenic | 30.0% | |
| TGTATCGTTTGACATATCTA+AGG | + | chr1_1:70089219-70089238 | None:intergenic | 30.0% | |
| ATAAATGGACAGATATTGAC+GGG | - | chr1_1:70089805-70089824 | Msa0040100:CDS | 30.0% | |
| TAAGCATATTAATTGGCCAT+TGG | + | chr1_1:70090077-70090096 | None:intergenic | 30.0% | |
| TAAAGGTCAATAGCATCAAT+CGG | + | chr1_1:70090158-70090177 | None:intergenic | 30.0% | |
| ! | ATTTCAATATTGGGCCTTTT+GGG | + | chr1_1:70090231-70090250 | None:intergenic | 30.0% |
| TCGGAAGAGATTTCAATATT+GGG | + | chr1_1:70090240-70090259 | None:intergenic | 30.0% | |
| ATCGGAAGAGATTTCAATAT+TGG | + | chr1_1:70090241-70090260 | None:intergenic | 30.0% | |
| TAAACTTGGTCCAATGAAAT+AGG | - | chr1_1:70090296-70090315 | Msa0040100:intron | 30.0% | |
| ! | TTTGCATTAGTTTACCTACT+TGG | - | chr1_1:70090460-70090479 | Msa0040100:CDS | 30.0% |
| AATATAGCATTAGACCAAGT+AGG | + | chr1_1:70090477-70090496 | None:intergenic | 30.0% | |
| !! | GTAGCTTTGATGAAGAAAAT+TGG | - | chr1_1:70090540-70090559 | Msa0040100:intron | 30.0% |
| AATTTACATTTGGGAAAGTC+TGG | - | chr1_1:70090590-70090609 | Msa0040100:CDS | 30.0% | |
| ATTTACATTTGGGAAAGTCT+GGG | - | chr1_1:70090591-70090610 | Msa0040100:CDS | 30.0% | |
| ! | TCACTGTTTTCAGTAGATAT+AGG | + | chr1_1:70090658-70090677 | None:intergenic | 30.0% |
| TCATATCATTCATATGCCAA+TGG | - | chr1_1:70090692-70090711 | Msa0040100:intron | 30.0% | |
| GTTTACACAAGTAGTTTATG+TGG | - | chr1_1:70090764-70090783 | Msa0040100:intron | 30.0% | |
| TTACATAACAGAATGGTTAG+TGG | + | chr1_1:70090831-70090850 | None:intergenic | 30.0% | |
| ACTCAATTTAGAAAAAGGAG+TGG | + | chr1_1:70091240-70091259 | None:intergenic | 30.0% | |
| AGAAAATCAAATCAAACCTC+AGG | + | chr1_1:70091365-70091384 | None:intergenic | 30.0% | |
| !! | GTTTTGGACTAGACAAAAAT+AGG | + | chr1_1:70091414-70091433 | None:intergenic | 30.0% |
| ATGCTCTATTAGAATTTGCA+AGG | + | chr1_1:70091625-70091644 | None:intergenic | 30.0% | |
| GACAATTGACAATTATCACT+TGG | + | chr1_1:70091788-70091807 | None:intergenic | 30.0% | |
| TAATTGTCAATTGTCGTTCT+TGG | - | chr1_1:70091793-70091812 | Msa0040100:intron | 30.0% | |
| !!! | AGTTTTTTATCCCATATGTC+TGG | - | chr1_1:70091997-70092016 | Msa0040100:intron | 30.0% |
| ! | TTCTTATTCACATAGTCTTG+AGG | - | chr1_1:70092056-70092075 | Msa0040100:intron | 30.0% |
| GCAGAGTGAAAAAAATATAG+CGG | + | chr1_1:70092235-70092254 | None:intergenic | 30.0% | |
| ATCAACTGGAAACAAAGTTA+TGG | + | chr1_1:70092314-70092333 | None:intergenic | 30.0% | |
| TACACATACACAAACAGAAA+AGG | + | chr1_1:70092367-70092386 | None:intergenic | 30.0% | |
| TTTCTGTTTGTGTATGTGTA+TGG | - | chr1_1:70092367-70092386 | Msa0040100:intron | 30.0% | |
| !!! | CTTTTATGATGGATAAATGC+TGG | - | chr1_1:70092479-70092498 | Msa0040100:intron | 30.0% |
| TTGTCAAACATACTAGACTT+AGG | + | chr1_1:70092578-70092597 | None:intergenic | 30.0% | |
| CAAATCAATGACCAAAACAA+GGG | + | chr1_1:70092663-70092682 | None:intergenic | 30.0% | |
| ACAAATCAATGACCAAAACA+AGG | + | chr1_1:70092664-70092683 | None:intergenic | 30.0% | |
| GAATTGCAGAAACTTGAAAA+TGG | - | chr1_1:70092691-70092710 | Msa0040100:intron | 30.0% | |
| ATTGCAGAAACTTGAAAATG+GGG | - | chr1_1:70092693-70092712 | Msa0040100:intron | 30.0% | |
| TGCTTGTATTAGTACAAATG+TGG | - | chr1_1:70092779-70092798 | Msa0040100:intron | 30.0% | |
| !! | TCAAAAGTGTTAGAAGAGAA+AGG | - | chr1_1:70093195-70093214 | Msa0040100:five_prime_UTR | 30.0% |
| !! | CAAAAGTGTTAGAAGAGAAA+GGG | - | chr1_1:70093196-70093215 | Msa0040100:five_prime_UTR | 30.0% |
| GCTACAATTGGAATAAACAA+TGG | - | chr1_1:70093352-70093371 | Msa0040100:five_prime_UTR | 30.0% | |
| GAAGAAAAAGAAGAACGAGA+AGG | + | chr1_1:70084144-70084163 | None:intergenic | 35.0% | |
| TTGAACGTAATCACTTGTGT+CGG | - | chr1_1:70084791-70084810 | Msa0040100:intron | 35.0% | |
| CGAAAAACAATTGTCAAACC+AGG | - | chr1_1:70085163-70085182 | Msa0040100:CDS | 35.0% | |
| ! | TTGAAGCACTTGATTGAAAG+TGG | - | chr1_1:70085306-70085325 | Msa0040100:intron | 35.0% |
| ! | GCAGTTGTATCTATCTTTTG+AGG | - | chr1_1:70085332-70085351 | Msa0040100:intron | 35.0% |
| !!! | CCTTTTTTTCAACCAATCAG+CGG | + | chr1_1:70085737-70085756 | None:intergenic | 35.0% |
| AAATGAATCACCATGAGTTG+AGG | - | chr1_1:70085779-70085798 | Msa0040100:intron | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | - | chr1_1:70085810-70085829 | Msa0040100:intron | 35.0% | |
| AGAAGAATTCGGTACGTATA+GGG | + | chr1_1:70085952-70085971 | None:intergenic | 35.0% | |
| ATGCATAGTCACATAATTCG+CGG | + | chr1_1:70086022-70086041 | None:intergenic | 35.0% | |
| TGATAAGTATCCAAGGACTT+GGG | - | chr1_1:70086055-70086074 | Msa0040100:intron | 35.0% | |
| GTTCTTTCCCCTTTATAACT+AGG | + | chr1_1:70086097-70086116 | None:intergenic | 35.0% | |
| CTGATAGGAAATTGGGTATT+AGG | + | chr1_1:70086184-70086203 | None:intergenic | 35.0% | |
| ! | GTTGCATTTATGATTTTGGG+CGG | - | chr1_1:70086203-70086222 | Msa0040100:intron | 35.0% |
| TTATAGCATCAGTAGAAGTG+AGG | - | chr1_1:70086664-70086683 | Msa0040100:intron | 35.0% | |
| CAGAATAACTCAATGACCAA+CGG | + | chr1_1:70086946-70086965 | None:intergenic | 35.0% | |
| !!! | TAGTGCATTATTGGTTTTGC+AGG | - | chr1_1:70086991-70087010 | Msa0040100:intron | 35.0% |
| TAAATTTCATTACCCGTCCT+AGG | - | chr1_1:70087053-70087072 | Msa0040100:intron | 35.0% | |
| AAATTTCATTACCCGTCCTA+GGG | - | chr1_1:70087054-70087073 | Msa0040100:intron | 35.0% | |
| TGACTTCCGTCATAAAAGAT+GGG | + | chr1_1:70087103-70087122 | None:intergenic | 35.0% | |
| GAACTGACCAAATAACTGAA+TGG | + | chr1_1:70087355-70087374 | None:intergenic | 35.0% | |
| ! | AGTTATTTGGTCAGTTCTAG+CGG | - | chr1_1:70087358-70087377 | Msa0040100:intron | 35.0% |
| GTATGAGTTGTCGGAAAATT+GGG | + | chr1_1:70087530-70087549 | None:intergenic | 35.0% | |
| AGTATGAGTTGTCGGAAAAT+TGG | + | chr1_1:70087531-70087550 | None:intergenic | 35.0% | |
| ACAATCAATTGCTTGCTCTA+AGG | + | chr1_1:70087560-70087579 | None:intergenic | 35.0% | |
| TGATCAGTCTTAAAATGCAG+TGG | - | chr1_1:70087644-70087663 | Msa0040100:CDS | 35.0% | |
| CAAAAGGCAACTTTATGTGT+CGG | + | chr1_1:70087704-70087723 | None:intergenic | 35.0% | |
| ! | GCTTCTTTGTTTGATACACT+TGG | - | chr1_1:70087723-70087742 | Msa0040100:intron | 35.0% |
| AAGCATATGTGAGCATTCTA+CGG | + | chr1_1:70087801-70087820 | None:intergenic | 35.0% | |
| ! | TTTTGCGGACTTTGATTCTA+GGG | + | chr1_1:70088337-70088356 | None:intergenic | 35.0% |
| ! | ATTTTGCGGACTTTGATTCT+AGG | + | chr1_1:70088338-70088357 | None:intergenic | 35.0% |
| TTGTGAGATGAGCAGAATAT+AGG | - | chr1_1:70088411-70088430 | Msa0040100:intron | 35.0% | |
| CTTATATCAAAGAGAAGGAG+GGG | - | chr1_1:70088506-70088525 | Msa0040100:CDS | 35.0% | |
| ATGAAACGGAAGGAAAAAAG+CGG | + | chr1_1:70088565-70088584 | None:intergenic | 35.0% | |
| GTCTCGGTTTAATACTTTCT+TGG | - | chr1_1:70088658-70088677 | Msa0040100:intron | 35.0% | |
| TCAATGAGAAGGGAAAATGA+AGG | + | chr1_1:70088736-70088755 | None:intergenic | 35.0% | |
| TCTAGCTGTATCAATGAGAA+GGG | + | chr1_1:70088746-70088765 | None:intergenic | 35.0% | |
| ! | TTCTAGCTGTATCAATGAGA+AGG | + | chr1_1:70088747-70088766 | None:intergenic | 35.0% |
| TCACAAATTCCTTTCCACTT+TGG | - | chr1_1:70088768-70088787 | Msa0040100:intron | 35.0% | |
| GACAAATAAGTGAATAAGGG+TGG | + | chr1_1:70089174-70089193 | None:intergenic | 35.0% | |
| ATTGGAGGTTAGTGTAATTG+AGG | - | chr1_1:70089264-70089283 | Msa0040100:intron | 35.0% | |
| TTGGAGGTTAGTGTAATTGA+GGG | - | chr1_1:70089265-70089284 | Msa0040100:intron | 35.0% | |
| !!! | CCTCTTTTTTGTAAGATTCG+CGG | + | chr1_1:70089295-70089314 | None:intergenic | 35.0% |
| CGAATCTTACAAAAAAGAGG+AGG | - | chr1_1:70089295-70089314 | Msa0040100:intron | 35.0% | |
| TTTGAAGATCAACTTCGTTG+AGG | - | chr1_1:70089398-70089417 | Msa0040100:intron | 35.0% | |
| TTCGTTGAGGCTTATTACTT+TGG | - | chr1_1:70089411-70089430 | Msa0040100:intron | 35.0% | |
| TCGTTGAGGCTTATTACTTT+GGG | - | chr1_1:70089412-70089431 | Msa0040100:intron | 35.0% | |
| !! | TTAACAGTTAATGCCGATTC+TGG | - | chr1_1:70089602-70089621 | Msa0040100:intron | 35.0% |
| TTGTATAGAGCTTCCAGAAT+CGG | + | chr1_1:70089618-70089637 | None:intergenic | 35.0% | |
| CTCTATACAATGCTCAAAGT+AGG | - | chr1_1:70089628-70089647 | Msa0040100:intron | 35.0% | |
| AACTGCAACGATTGTGTTAA+AGG | - | chr1_1:70089770-70089789 | Msa0040100:CDS | 35.0% | |
| ! | GATTTCAATATTGGGCCTTT+TGG | + | chr1_1:70090232-70090251 | None:intergenic | 35.0% |
| ! | GGTCTAATGCTATATTTTGC+TGG | - | chr1_1:70090481-70090500 | Msa0040100:intron | 35.0% |
| !! | TTTTGCTGGTCTGATCTAAT+AGG | - | chr1_1:70090495-70090514 | Msa0040100:intron | 35.0% |
| TGGTCTGATCTAATAGGATT+AGG | - | chr1_1:70090501-70090520 | Msa0040100:intron | 35.0% | |
| GGTCTGATCTAATAGGATTA+GGG | - | chr1_1:70090502-70090521 | Msa0040100:intron | 35.0% | |
| !! | CAGAGATAACAAGCTCTAAA+AGG | + | chr1_1:70091034-70091053 | None:intergenic | 35.0% |
| !!! | CTTTTAGAGCTTGTTATCTC+TGG | - | chr1_1:70091032-70091051 | Msa0040100:intron | 35.0% |
| CAATATTCTTGCTTCTCATC+AGG | - | chr1_1:70091068-70091087 | Msa0040100:intron | 35.0% | |
| GCAAAAGACAACTCAATTGA+AGG | - | chr1_1:70091133-70091152 | Msa0040100:intron | 35.0% | |
| ! | AAACAGCTTTGTAGATGATG+TGG | - | chr1_1:70091156-70091175 | Msa0040100:intron | 35.0% |
| ! | GGTCTAAAGTTTGTGATCAA+TGG | + | chr1_1:70091219-70091238 | None:intergenic | 35.0% |
| ACGGTATTGCTTTATGTGAT+TGG | - | chr1_1:70091450-70091469 | Msa0040100:intron | 35.0% | |
| ! | GTGATGGAATGAAGGTAATA+AGG | - | chr1_1:70091820-70091839 | Msa0040100:intron | 35.0% |
| AAATACAGTCACATAGAAGC+AGG | + | chr1_1:70091915-70091934 | None:intergenic | 35.0% | |
| ATGGGATAAAAAACTCCTCA+GGG | + | chr1_1:70091992-70092011 | None:intergenic | 35.0% | |
| TATGGGATAAAAAACTCCTC+AGG | + | chr1_1:70091993-70092012 | None:intergenic | 35.0% | |
| ! | ATTGAGGTTTGAGATACACT+AGG | - | chr1_1:70092120-70092139 | Msa0040100:CDS | 35.0% |
| ! | TTTGAGATACACTAGGTCTA+GGG | - | chr1_1:70092127-70092146 | Msa0040100:CDS | 35.0% |
| ATGCAATGCATATAGTTGTG+TGG | + | chr1_1:70092608-70092627 | None:intergenic | 35.0% | |
| !! | ACTGATTTCTTCCCTTGTTT+TGG | - | chr1_1:70092649-70092668 | Msa0040100:intron | 35.0% |
| TGTACTAATACAAGCAGCTA+TGG | + | chr1_1:70092775-70092794 | None:intergenic | 35.0% | |
| GGATATCTCATCTTCATCTA+CGG | + | chr1_1:70092938-70092957 | None:intergenic | 35.0% | |
| ! | ACAGATTTTGTAGATGTGCT+CGG | - | chr1_1:70093006-70093025 | Msa0040100:CDS | 35.0% |
| !!! | TGTAGTTTTATCCCATTCTG+AGG | - | chr1_1:70093239-70093258 | Msa0040100:five_prime_UTR | 35.0% |
| !!! | GTAGTTTTATCCCATTCTGA+GGG | - | chr1_1:70093240-70093259 | Msa0040100:five_prime_UTR | 35.0% |
| AAATTCGCGGAGAGATGAAA+AGG | + | chr1_1:70084260-70084279 | None:intergenic | 40.0% | |
| CTGCATTGTGTGAAAATTCG+CGG | + | chr1_1:70084273-70084292 | None:intergenic | 40.0% | |
| AAATCTCGTTGCGTCTGATT+TGG | + | chr1_1:70084317-70084336 | None:intergenic | 40.0% | |
| ! | TATCTGATCGGGACTTTTGT+CGG | - | chr1_1:70084440-70084459 | Msa0040100:three_prime_UTR | 40.0% |
| AGCTTCCTCTCAATGTTCAA+TGG | - | chr1_1:70084510-70084529 | Msa0040100:three_prime_UTR | 40.0% | |
| !! | TTGGGTTAGTCTTCTTCATG+AGG | - | chr1_1:70084566-70084585 | Msa0040100:three_prime_UTR | 40.0% |
| ! | ATTTGAGATGGAAACGTGTC+CGG | + | chr1_1:70084831-70084850 | None:intergenic | 40.0% |
| ! | GCAGCCTTTTCATAAACCAA+GGG | + | chr1_1:70085258-70085277 | None:intergenic | 40.0% |
| ! | AGCAGCCTTTTCATAAACCA+AGG | + | chr1_1:70085259-70085278 | None:intergenic | 40.0% |
| ! | AGCTGTACTGAAGGATGTTT+TGG | - | chr1_1:70085362-70085381 | Msa0040100:intron | 40.0% |
| ! | GCTGTACTGAAGGATGTTTT+GGG | - | chr1_1:70085363-70085382 | Msa0040100:intron | 40.0% |
| ! | GCGTGGTAGATTTAACTTTC+AGG | - | chr1_1:70085394-70085413 | Msa0040100:intron | 40.0% |
| TGGGAAATCTCCCAAATTCA+TGG | + | chr1_1:70085442-70085461 | None:intergenic | 40.0% | |
| !!! | TAGCGTGTTTGGTTTTGCAT+GGG | + | chr1_1:70085461-70085480 | None:intergenic | 40.0% |
| !!! | ATAGCGTGTTTGGTTTTGCA+TGG | + | chr1_1:70085462-70085481 | None:intergenic | 40.0% |
| ATCAAGGGAGAATTGCGAAT+TGG | - | chr1_1:70085633-70085652 | Msa0040100:intron | 40.0% | |
| ! | CCGCTGATTGGTTGAAAAAA+AGG | - | chr1_1:70085734-70085753 | Msa0040100:CDS | 40.0% |
| GAAGAATTCGGTACGTATAG+GGG | + | chr1_1:70085951-70085970 | None:intergenic | 40.0% | |
| GAGAAGAATTCGGTACGTAT+AGG | + | chr1_1:70085953-70085972 | None:intergenic | 40.0% | |
| CTGATAAGTATCCAAGGACT+TGG | - | chr1_1:70086054-70086073 | Msa0040100:intron | 40.0% | |
| GATAAGTATCCAAGGACTTG+GGG | - | chr1_1:70086056-70086075 | Msa0040100:intron | 40.0% | |
| ATCAAGTAGTATGCGATGCT+CGG | + | chr1_1:70086144-70086163 | None:intergenic | 40.0% | |
| CCCAAGTAGATGCCAAAATT+CGG | + | chr1_1:70086263-70086282 | None:intergenic | 40.0% | |
| !! | CCGAATTTTGGCATCTACTT+GGG | - | chr1_1:70086260-70086279 | Msa0040100:intron | 40.0% |
| CGACTCATATGCAACTTTAC+CGG | - | chr1_1:70086694-70086713 | Msa0040100:intron | 40.0% | |
| ATGTCAACTCAGCTTCTATG+TGG | - | chr1_1:70086839-70086858 | Msa0040100:intron | 40.0% | |
| TCCATTTCTTGATGCAGCAA+TGG | - | chr1_1:70086889-70086908 | Msa0040100:intron | 40.0% | |
| GAGTCTTTAACATCAACCGT+TGG | - | chr1_1:70086927-70086946 | Msa0040100:intron | 40.0% | |
| CTGACTTCCGTCATAAAAGA+TGG | + | chr1_1:70087104-70087123 | None:intergenic | 40.0% | |
| AGGGTCAAGAAATCCAATAG+CGG | - | chr1_1:70087384-70087403 | Msa0040100:intron | 40.0% | |
| TCATAAATGTGCTGTGAGTG+AGG | - | chr1_1:70087444-70087463 | Msa0040100:intron | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr1_1:70088281-70088300 | None:intergenic | 40.0% | |
| TTATTTGCAGCTTCGTGTCT+CGG | - | chr1_1:70088642-70088661 | Msa0040100:intron | 40.0% | |
| ! | TTTGAGGCTCTAGTATCTCA+TGG | - | chr1_1:70088681-70088700 | Msa0040100:intron | 40.0% |
| GTAGAGGAATAAAAGTTGCC+AGG | + | chr1_1:70088904-70088923 | None:intergenic | 40.0% | |
| ! | GGCAACTTTTATTCCTCTAC+AGG | - | chr1_1:70088904-70088923 | Msa0040100:intron | 40.0% |
| ! | GCAAGGAAATTCTGCCTTTT+TGG | - | chr1_1:70088971-70088990 | Msa0040100:intron | 40.0% |
| !!! | TGCCTTTTTGGAGTATGTCT+TGG | - | chr1_1:70088983-70089002 | Msa0040100:intron | 40.0% |
| CACCAAGACATACTCCAAAA+AGG | + | chr1_1:70088988-70089007 | None:intergenic | 40.0% | |
| !!! | TTTTGGAGTATGTCTTGGTG+CGG | - | chr1_1:70088988-70089007 | Msa0040100:intron | 40.0% |
| CCGCGAATCTTACAAAAAAG+AGG | - | chr1_1:70089292-70089311 | Msa0040100:intron | 40.0% | |
| CAATGCTAGCATTCATAAGC+TGG | - | chr1_1:70089713-70089732 | Msa0040100:intron | 40.0% | |
| AACACAATCGTTGCAGTTTC+AGG | + | chr1_1:70089768-70089787 | None:intergenic | 40.0% | |
| AGAAGACGTTCTTTGTACCA+TGG | + | chr1_1:70089835-70089854 | None:intergenic | 40.0% | |
| ! | TCCTGTTTGAGTTCACTTGA+TGG | - | chr1_1:70090199-70090218 | Msa0040100:intron | 40.0% |
| ACCATCAAGTGAACTCAAAC+AGG | + | chr1_1:70090203-70090222 | None:intergenic | 40.0% | |
| !! | CTTGATGGTGTTTACCCAAA+AGG | - | chr1_1:70090214-70090233 | Msa0040100:intron | 40.0% |
| ACGCGAACAGAACAATGTAT+CGG | + | chr1_1:70090259-70090278 | None:intergenic | 40.0% | |
| ATTGTTCTGTTCGCGTAACA+TGG | - | chr1_1:70090263-70090282 | Msa0040100:intron | 40.0% | |
| AAGGCAGGATCCTATTTCAT+TGG | + | chr1_1:70090309-70090328 | None:intergenic | 40.0% | |
| TAGCACTAGAATTTCAAGGC+AGG | + | chr1_1:70090324-70090343 | None:intergenic | 40.0% | |
| CCAACTCTACAAGTATCCAT+TGG | + | chr1_1:70090711-70090730 | None:intergenic | 40.0% | |
| CCAATGGATACTTGTAGAGT+TGG | - | chr1_1:70090708-70090727 | Msa0040100:intron | 40.0% | |
| ATGCATATGCACTCAAACGA+TGG | + | chr1_1:70090921-70090940 | None:intergenic | 40.0% | |
| !! | AGATTTACACCGACTTCTTG+AGG | - | chr1_1:70091288-70091307 | Msa0040100:intron | 40.0% |
| TAGTACAAGCCTCAAGAAGT+CGG | + | chr1_1:70091300-70091319 | None:intergenic | 40.0% | |
| TTGCTTTATGTGATTGGAGC+AGG | - | chr1_1:70091456-70091475 | Msa0040100:intron | 40.0% | |
| TAGTGTATGCAGTAATGCAC+AGG | - | chr1_1:70091479-70091498 | Msa0040100:intron | 40.0% | |
| ATGGATGCTCAAAGAGTTGA+TGG | - | chr1_1:70091738-70091757 | Msa0040100:intron | 40.0% | |
| TTGTCAATTGTCGTTCTTGG+AGG | - | chr1_1:70091796-70091815 | Msa0040100:intron | 40.0% | |
| TGTCAATTGTCGTTCTTGGA+GGG | - | chr1_1:70091797-70091816 | Msa0040100:intron | 40.0% | |
| ATACAAGCTGCCAGACATAT+GGG | + | chr1_1:70092010-70092029 | None:intergenic | 40.0% | |
| AATACAAGCTGCCAGACATA+TGG | + | chr1_1:70092011-70092030 | None:intergenic | 40.0% | |
| !! | CAGCTCAATCAAGAGTATTG+AGG | - | chr1_1:70092104-70092123 | Msa0040100:intron | 40.0% |
| ! | GTTTGAGATACACTAGGTCT+AGG | - | chr1_1:70092126-70092145 | Msa0040100:CDS | 40.0% |
| TTGAGATACACTAGGTCTAG+GGG | - | chr1_1:70092128-70092147 | Msa0040100:CDS | 40.0% | |
| AAAATTTGTGTCACCTCCAG+TGG | - | chr1_1:70092268-70092287 | Msa0040100:CDS | 40.0% | |
| ATTGAATGTGAATCCACTGG+AGG | + | chr1_1:70092284-70092303 | None:intergenic | 40.0% | |
| ! | TCCAGTGGATTCACATTCAA+TGG | - | chr1_1:70092283-70092302 | Msa0040100:CDS | 40.0% |
| TCCATTGAATGTGAATCCAC+TGG | + | chr1_1:70092287-70092306 | None:intergenic | 40.0% | |
| ACTTCTGAGTGTAGATCAAC+TGG | + | chr1_1:70092328-70092347 | None:intergenic | 40.0% | |
| AAACTTGAAAATGGGGTGGA+GGG | - | chr1_1:70092700-70092719 | Msa0040100:intron | 40.0% | |
| TATGGATCAAGCTGATACTC+AGG | + | chr1_1:70092757-70092776 | None:intergenic | 40.0% | |
| GTCAGCGCTTATTCAATACA+TGG | + | chr1_1:70092959-70092978 | None:intergenic | 40.0% | |
| TTCGATCAACAGCATTAGTG+AGG | + | chr1_1:70093044-70093063 | None:intergenic | 40.0% | |
| CTAGCATCTCTAGCTACAAT+TGG | - | chr1_1:70093340-70093359 | Msa0040100:five_prime_UTR | 40.0% | |
| AAGGAGCTTCTTCGAAACGA+AGG | + | chr1_1:70084125-70084144 | None:intergenic | 45.0% | |
| ! | TTCTTTCTGAATGGGTTCGG+TGG | - | chr1_1:70084370-70084389 | Msa0040100:three_prime_UTR | 45.0% |
| TGAGTCGTTCCCTTTCTCAT+CGG | - | chr1_1:70084466-70084485 | Msa0040100:three_prime_UTR | 45.0% | |
| ! | TCCCTTTCTCATCGGAGTTT+TGG | - | chr1_1:70084474-70084493 | Msa0040100:three_prime_UTR | 45.0% |
| GCCAAAACTCCGATGAGAAA+GGG | + | chr1_1:70084478-70084497 | None:intergenic | 45.0% | |
| TGCCAAAACTCCGATGAGAA+AGG | + | chr1_1:70084479-70084498 | None:intergenic | 45.0% | |
| ! | TCAACAAGCTTGCGAGCTTT+TGG | - | chr1_1:70084547-70084566 | Msa0040100:three_prime_UTR | 45.0% |
| ! | CAACAAGCTTGCGAGCTTTT+GGG | - | chr1_1:70084548-70084567 | Msa0040100:three_prime_UTR | 45.0% |
| CTGTGTGTCAGTGTCATATC+CGG | + | chr1_1:70084742-70084761 | None:intergenic | 45.0% | |
| TATGACACTGACACACAGAC+CGG | - | chr1_1:70084744-70084763 | Msa0040100:CDS | 45.0% | |
| TGCAGCAACGACATTTGAGA+TGG | + | chr1_1:70084843-70084862 | None:intergenic | 45.0% | |
| CAAAAGCTTTGCAAGATGCC+TGG | + | chr1_1:70085184-70085203 | None:intergenic | 45.0% | |
| ! | GCCTTTTCATAAACCAAGGG+CGG | + | chr1_1:70085255-70085274 | None:intergenic | 45.0% |
| GCTGCTAATGCAGTGTACAT+CGG | - | chr1_1:70085273-70085292 | Msa0040100:intron | 45.0% | |
| !! | GTACTGAAGGATGTTTTGGG+AGG | - | chr1_1:70085366-70085385 | Msa0040100:intron | 45.0% |
| !! | TGGTACGTGAGTACCGAATT+CGG | - | chr1_1:70085653-70085672 | Msa0040100:intron | 45.0% |
| ! | AGTACCGAATTCGGGTACTT+CGG | - | chr1_1:70085662-70085681 | Msa0040100:CDS | 45.0% |
| TAACCATGCTTTGGTACGCT+TGG | + | chr1_1:70085714-70085733 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | + | chr1_1:70085723-70085742 | None:intergenic | 45.0% | |
| AAAGCATGGTTACCGCTGAT+TGG | - | chr1_1:70085722-70085741 | Msa0040100:CDS | 45.0% | |
| AGAGTGGAGAGTGAGAAACT+TGG | - | chr1_1:70085826-70085845 | Msa0040100:intron | 45.0% | |
| ! | CGTATAGGGGTATACAGCTT+CGG | + | chr1_1:70085938-70085957 | None:intergenic | 45.0% |
| TACGCGACAGGAGAAGAATT+CGG | + | chr1_1:70085963-70085982 | None:intergenic | 45.0% | |
| ACATAATTCGCGGTTCGTTC+CGG | + | chr1_1:70086012-70086031 | None:intergenic | 45.0% | |
| GCATCGCATACTACTTGATG+TGG | - | chr1_1:70086145-70086164 | Msa0040100:CDS | 45.0% | |
| ! | AAACGGCTTGAGCCGAATTT+TGG | - | chr1_1:70086248-70086267 | Msa0040100:intron | 45.0% |
| !! | GCCGAATTTTGGCATCTACT+TGG | - | chr1_1:70086259-70086278 | Msa0040100:intron | 45.0% |
| ACATCATTTGGTCCAGGAGA+TGG | + | chr1_1:70086866-70086885 | None:intergenic | 45.0% | |
| GGATTCACATCATTTGGTCC+AGG | + | chr1_1:70086872-70086891 | None:intergenic | 45.0% | |
| GCCATTGCTGCATCAAGAAA+TGG | + | chr1_1:70086893-70086912 | None:intergenic | 45.0% | |
| ATTGAATGGAACCCTAGGAC+GGG | + | chr1_1:70087068-70087087 | None:intergenic | 45.0% | |
| GATTGAATGGAACCCTAGGA+CGG | + | chr1_1:70087069-70087088 | None:intergenic | 45.0% | |
| GTCCTAGGGTTCCATTCAAT+CGG | - | chr1_1:70087068-70087087 | Msa0040100:intron | 45.0% | |
| TCCTAGGGTTCCATTCAATC+GGG | - | chr1_1:70087069-70087088 | Msa0040100:intron | 45.0% | |
| GGATAAGTTGCCCGATTGAA+TGG | + | chr1_1:70087082-70087101 | None:intergenic | 45.0% | |
| AGTAGTGTGCTACAGAGAGT+TGG | - | chr1_1:70087124-70087143 | Msa0040100:intron | 45.0% | |
| TGAAGACTGCTATCCGCTAT+TGG | + | chr1_1:70087400-70087419 | None:intergenic | 45.0% | |
| TTCCGACAACTCATACTGCA+AGG | - | chr1_1:70087534-70087553 | Msa0040100:intron | 45.0% | |
| GCAACAACGAGTAAAGCAGT+AGG | + | chr1_1:70088953-70088972 | None:intergenic | 45.0% | |
| CTGCTTTACTCGTTGTTGCA+AGG | - | chr1_1:70088954-70088973 | Msa0040100:intron | 45.0% | |
| ! | GCGGACTGATATAGACACAT+TGG | - | chr1_1:70089007-70089026 | Msa0040100:intron | 45.0% |
| GAGGTTAGTGTAATTGAGGG+AGG | - | chr1_1:70089268-70089287 | Msa0040100:intron | 45.0% | |
| ! | AGATATTGACGGGTGTTCCA+TGG | - | chr1_1:70089815-70089834 | Msa0040100:intron | 45.0% |
| CTTCTCCATCAGACTTCTCT+TGG | - | chr1_1:70089850-70089869 | Msa0040100:intron | 45.0% | |
| GAGAACCAAGAGAAGTCTGA+TGG | + | chr1_1:70089858-70089877 | None:intergenic | 45.0% | |
| ! | GACTTCTCTTGGTTCTCTCA+TGG | - | chr1_1:70089861-70089880 | Msa0040100:intron | 45.0% |
| CTATCTCCACACAACATGTC+TGG | - | chr1_1:70090867-70090886 | Msa0040100:intron | 45.0% | |
| AAGTTGCCAGACATGTTGTG+TGG | + | chr1_1:70090876-70090895 | None:intergenic | 45.0% | |
| CACAACATGTCTGGCAACTT+TGG | - | chr1_1:70090876-70090895 | Msa0040100:intron | 45.0% | |
| TCTGGCAACTTTGGCTAACA+TGG | - | chr1_1:70090885-70090904 | Msa0040100:intron | 45.0% | |
| ! | TGCGTGAGAGCATATCGAAA+AGG | + | chr1_1:70090960-70090979 | None:intergenic | 45.0% |
| !! | GTGTCACAAAAGCACCAAGA+TGG | + | chr1_1:70091197-70091216 | None:intergenic | 45.0% |
| AATCAAACCTCAGGATTCCG+AGG | + | chr1_1:70091356-70091375 | None:intergenic | 45.0% | |
| AAGCGTGGATGACTCTTGTA+TGG | + | chr1_1:70091520-70091539 | None:intergenic | 45.0% | |
| TCAAGTAGTTCATGGAAGCG+TGG | + | chr1_1:70091535-70091554 | None:intergenic | 45.0% | |
| !! | CTCAAAGAGTTGATGGTGAC+TGG | - | chr1_1:70091745-70091764 | Msa0040100:intron | 45.0% |
| GTCAATTGTCGTTCTTGGAG+GGG | - | chr1_1:70091798-70091817 | Msa0040100:intron | 45.0% | |
| TTTGTGGTGCGCTTCCATTA+CGG | - | chr1_1:70091857-70091876 | Msa0040100:intron | 45.0% | |
| ! | GCTCAAAGAAGCATACCAGT+GGG | + | chr1_1:70092036-70092055 | None:intergenic | 45.0% |
| ! | AGCTCAAAGAAGCATACCAG+TGG | + | chr1_1:70092037-70092056 | None:intergenic | 45.0% |
| GCAGAAACTTGAAAATGGGG+TGG | - | chr1_1:70092696-70092715 | Msa0040100:intron | 45.0% | |
| GAAACTTGAAAATGGGGTGG+AGG | - | chr1_1:70092699-70092718 | Msa0040100:intron | 45.0% | |
| AACTTGAAAATGGGGTGGAG+GGG | - | chr1_1:70092701-70092720 | Msa0040100:intron | 45.0% | |
| ! | GAGGGGAGCACATTTCAAAA+TGG | - | chr1_1:70092718-70092737 | Msa0040100:intron | 45.0% |
| AACAGCATTAGTGAGGACTG+AGG | + | chr1_1:70093037-70093056 | None:intergenic | 45.0% | |
| !!! | ATTGATTAATTTAATTTTTA+TGG | - | chr1_1:70084921-70084940 | Msa0040100:intron | 5.0% |
| !!! | AAAAAATTCTAAATTTTTTT+GGG | + | chr1_1:70088025-70088044 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAAATTTTTT+TGG | + | chr1_1:70088026-70088045 | None:intergenic | 5.0% |
| !!! | ATAAATTTTTATATTTTTGA+CGG | + | chr1_1:70088079-70088098 | None:intergenic | 5.0% |
| !!! | TAAAAAATTCTAATTTTTTT+TGG | - | chr1_1:70088117-70088136 | Msa0040100:intron | 5.0% |
| !!! | AAAAAATTCTAATTTTTTTT+GGG | - | chr1_1:70088118-70088137 | Msa0040100:intron | 5.0% |
| !!! | ATGAATTTATTATATTTTAT+TGG | - | chr1_1:70089073-70089092 | Msa0040100:intron | 5.0% |
| !! | TTAAATATATATTAAACATA+CGG | + | chr1_1:70091569-70091588 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAAAACAT+TGG | + | chr1_1:70092201-70092220 | None:intergenic | 5.0% |
| !! | CTCGTTGCGTCTGATTTGGT+GGG | + | chr1_1:70084313-70084332 | None:intergenic | 50.0% |
| !! | TCTCGTTGCGTCTGATTTGG+TGG | + | chr1_1:70084314-70084333 | None:intergenic | 50.0% |
| GAGAATTCACCACGCTTACG+CGG | + | chr1_1:70084404-70084423 | None:intergenic | 50.0% | |
| TAAGCGTGGTGAATTCTCGC+CGG | - | chr1_1:70084406-70084425 | Msa0040100:three_prime_UTR | 50.0% | |
| TGGTGAATTCTCGCCGGAAA+CGG | - | chr1_1:70084412-70084431 | Msa0040100:three_prime_UTR | 50.0% | |
| ATCAGATACTCCGCCGTTTC+CGG | + | chr1_1:70084428-70084447 | None:intergenic | 50.0% | |
| ! | GAAACGGCGGAGTATCTGAT+CGG | - | chr1_1:70084428-70084447 | Msa0040100:three_prime_UTR | 50.0% |
| ! | AAACGGCGGAGTATCTGATC+GGG | - | chr1_1:70084429-70084448 | Msa0040100:three_prime_UTR | 50.0% |
| GCAGGCCATTGAACATTGAG+AGG | + | chr1_1:70084518-70084537 | None:intergenic | 50.0% | |
| ! | GCTTGTTGAACACGTTCAGC+AGG | + | chr1_1:70084536-70084555 | None:intergenic | 50.0% |
| CACTGACACAACACAGACAC+CGG | - | chr1_1:70084720-70084739 | Msa0040100:CDS | 50.0% | |
| CTCAAATGTCGTTGCTGCAG+AGG | - | chr1_1:70084844-70084863 | Msa0040100:intron | 50.0% | |
| CCTGCAAGTAGCATGCTAGA+TGG | + | chr1_1:70085209-70085228 | None:intergenic | 50.0% | |
| ! | CCATCTAGCATGCTACTTGC+AGG | - | chr1_1:70085206-70085225 | Msa0040100:intron | 50.0% |
| CAGGAGTCCATGTCTACTTC+TGG | - | chr1_1:70085225-70085244 | Msa0040100:intron | 50.0% | |
| GCCGCCCTTGGTTTATGAAA+AGG | - | chr1_1:70085251-70085270 | Msa0040100:intron | 50.0% | |
| GGGTGATGAAGCTGTACTGA+AGG | - | chr1_1:70085353-70085372 | Msa0040100:intron | 50.0% | |
| !! | GGTACGTGAGTACCGAATTC+GGG | - | chr1_1:70085654-70085673 | Msa0040100:intron | 50.0% |
| ! | TACGCCGAAGTACCCGAATT+CGG | + | chr1_1:70085669-70085688 | None:intergenic | 50.0% |
| ATTCGGGTACTTCGGCGTAT+TGG | - | chr1_1:70085670-70085689 | Msa0040100:CDS | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | - | chr1_1:70085708-70085727 | Msa0040100:CDS | 50.0% | |
| CTCACTCAGTCCTCAACTCA+TGG | + | chr1_1:70085792-70085811 | None:intergenic | 50.0% | |
| TATACAGCTTCGGTACGCTC+CGG | + | chr1_1:70085928-70085947 | None:intergenic | 50.0% | |
| CTTCTATGTGGTCCATCTCC+TGG | - | chr1_1:70086851-70086870 | Msa0040100:intron | 50.0% | |
| TCTTGATGCAGCAATGGCTC+AGG | - | chr1_1:70086895-70086914 | Msa0040100:intron | 50.0% | |
| GTTCTGCAGCTGGTATGAAC+TGG | - | chr1_1:70087146-70087165 | Msa0040100:intron | 50.0% | |
| AGCTGGTATGAACTGGTGAC+TGG | - | chr1_1:70087153-70087172 | Msa0040100:intron | 50.0% | |
| ! | TTGGTCAGTTCTAGCGGTGA+AGG | - | chr1_1:70087364-70087383 | Msa0040100:intron | 50.0% |
| ! | TGGTCAGTTCTAGCGGTGAA+GGG | - | chr1_1:70087365-70087384 | Msa0040100:intron | 50.0% |
| GGCCTTGCAGTATGAGTTGT+CGG | + | chr1_1:70087539-70087558 | None:intergenic | 50.0% | |
| AGTGGATCGTGTAGACATCG+AGG | - | chr1_1:70087662-70087681 | Msa0040100:intron | 50.0% | |
| GTGGATCGTGTAGACATCGA+GGG | - | chr1_1:70087663-70087682 | Msa0040100:intron | 50.0% | |
| CATCAGCTAAGCACCTGTAG+AGG | + | chr1_1:70088920-70088939 | None:intergenic | 50.0% | |
| CTACAGGTGCTTAGCTGATG+AGG | - | chr1_1:70088920-70088939 | Msa0040100:intron | 50.0% | |
| ATTTGGGAAAGTCTGGGAGC+TGG | - | chr1_1:70090597-70090616 | Msa0040100:CDS | 50.0% | |
| TTTGGGAAAGTCTGGGAGCT+GGG | - | chr1_1:70090598-70090617 | Msa0040100:CDS | 50.0% | |
| GCACTCAAACGATGGACATG+AGG | + | chr1_1:70090913-70090932 | None:intergenic | 50.0% | |
| TCCTGACTTATGCACTGCCT+CGG | - | chr1_1:70091336-70091355 | Msa0040100:intron | 50.0% | |
| GTATGCAGTAATGCACAGGC+AGG | - | chr1_1:70091483-70091502 | Msa0040100:intron | 50.0% | |
| !! | TTGGAGGGGTGATGGAATGA+AGG | - | chr1_1:70091812-70091831 | Msa0040100:intron | 50.0% |
| TGAACAAGAGAGACACCCTG+AGG | - | chr1_1:70091974-70091993 | Msa0040100:intron | 50.0% | |
| GGCAGCTTGTATTATCCCAC+TGG | - | chr1_1:70092018-70092037 | Msa0040100:intron | 50.0% | |
| GGAACTTCTGCCCTCAGAAT+GGG | + | chr1_1:70093253-70093272 | None:intergenic | 50.0% | |
| AGGAACTTCTGCCCTCAGAA+TGG | + | chr1_1:70093254-70093273 | None:intergenic | 50.0% | |
| TGAATTCTCGCCGGAAACGG+CGG | - | chr1_1:70084415-70084434 | Msa0040100:three_prime_UTR | 55.0% | |
| !! | GTCGGTGTCGTATCAGACAC+CGG | - | chr1_1:70084809-70084828 | Msa0040100:intron | 55.0% |
| ATGTCGTTGCTGCAGAGGCT+AGG | - | chr1_1:70084849-70084868 | Msa0040100:intron | 55.0% | |
| CGGCACACCAGAAGTAGACA+TGG | + | chr1_1:70085235-70085254 | None:intergenic | 55.0% | |
| !!! | TGTTTTGGGAGGTAAGCGCG+TGG | - | chr1_1:70085377-70085396 | Msa0040100:intron | 55.0% |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | + | chr1_1:70085706-70085725 | None:intergenic | 55.0% |
| ! | GGTTTTGCAGGACAGTGCTC+TGG | - | chr1_1:70087003-70087022 | Msa0040100:intron | 55.0% |
| TTGCAGGACAGTGCTCTGGT+TGG | - | chr1_1:70087007-70087026 | Msa0040100:intron | 55.0% | |
| GCCCGATTGAATGGAACCCT+AGG | + | chr1_1:70087073-70087092 | None:intergenic | 55.0% | |
| !! | CAGAGAGTTGGTTCTGCAGC+TGG | - | chr1_1:70087136-70087155 | Msa0040100:intron | 55.0% |
| ATCGAGGGCAATGCACACAG+TGG | - | chr1_1:70087678-70087697 | Msa0040100:intron | 55.0% | |
| AAGTCTGGGAGCTGGGTGTA+AGG | - | chr1_1:70090605-70090624 | Msa0040100:CDS | 55.0% | |
| TCCGAGGCAGTGCATAAGTC+AGG | + | chr1_1:70091340-70091359 | None:intergenic | 55.0% | |
| TGTCGTTCTTGGAGGGGTGA+TGG | - | chr1_1:70091804-70091823 | Msa0040100:intron | 55.0% | |
| TACTTCTGGTGTGCCGCCCT+TGG | - | chr1_1:70085239-70085258 | Msa0040100:intron | 60.0% | |
| TTCGTTCCGGTACGCGGTAC+GGG | + | chr1_1:70085999-70086018 | None:intergenic | 60.0% | |
| GTTCGTTCCGGTACGCGGTA+CGG | + | chr1_1:70086000-70086019 | None:intergenic | 60.0% | |
| GGAAGGGTTCCCCAAGTCCT+TGG | + | chr1_1:70086068-70086087 | None:intergenic | 60.0% | |
| CTGGGAGCTGGGTGTAAGGA+AGG | - | chr1_1:70090609-70090628 | Msa0040100:CDS | 60.0% | |
| TGCACTGCCTCGGAATCCTG+AGG | - | chr1_1:70091346-70091365 | Msa0040100:intron | 60.0% | |
| TCCGGTACGCGGTACGGGTA+CGG | + | chr1_1:70085994-70086013 | None:intergenic | 65.0% | |
| TCGCGGTTCGTTCCGGTACG+CGG | + | chr1_1:70086005-70086024 | None:intergenic | 65.0% | |
| GCGTCAACGCCGCGTAAGCG+TGG | - | chr1_1:70084392-70084411 | Msa0040100:three_prime_UTR | 70.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | + | chr1_1:70085975-70085994 | None:intergenic | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | + | chr1_1:70085986-70086005 | None:intergenic | 70.0% | |
| CCGGTACGCGGTACGGGTAC+GGG | + | chr1_1:70085993-70086012 | None:intergenic | 70.0% | |
| CCCGTACCCGTACCGCGTAC+CGG | - | chr1_1:70085990-70086009 | Msa0040100:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 70084106 | 70093387 | 70084106 | ID=Msa0040100;Name=Msa0040100 |
| chr1_1 | mRNA | 70084106 | 70093387 | 70084106 | ID=Msa0040100-mRNA-1;Parent=Msa0040100;Name=Msa0040100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=274|1|1|1|1|1|18|610|722 |
| chr1_1 | exon | 70084106 | 70084793 | 70084106 | ID=Msa0040100-mRNA-1:exon:23087;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70085148 | 70085205 | 70085148 | ID=Msa0040100-mRNA-1:exon:23086;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70085454 | 70085545 | 70085454 | ID=Msa0040100-mRNA-1:exon:23085;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70085660 | 70085779 | 70085660 | ID=Msa0040100-mRNA-1:exon:23084;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70085926 | 70086015 | 70085926 | ID=Msa0040100-mRNA-1:exon:23083;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70086126 | 70086218 | 70086126 | ID=Msa0040100-mRNA-1:exon:23082;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70086316 | 70086403 | 70086316 | ID=Msa0040100-mRNA-1:exon:23081;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70086513 | 70086631 | 70086513 | ID=Msa0040100-mRNA-1:exon:23080;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70087563 | 70087676 | 70087563 | ID=Msa0040100-mRNA-1:exon:23079;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70087759 | 70087884 | 70087759 | ID=Msa0040100-mRNA-1:exon:23078;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70088465 | 70088567 | 70088465 | ID=Msa0040100-mRNA-1:exon:23077;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70089745 | 70089829 | 70089745 | ID=Msa0040100-mRNA-1:exon:23076;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70089910 | 70090158 | 70089910 | ID=Msa0040100-mRNA-1:exon:23075;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70090336 | 70090480 | 70090336 | ID=Msa0040100-mRNA-1:exon:23074;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70090577 | 70090706 | 70090577 | ID=Msa0040100-mRNA-1:exon:23073;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70090808 | 70090871 | 70090808 | ID=Msa0040100-mRNA-1:exon:23072;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70092106 | 70092330 | 70092106 | ID=Msa0040100-mRNA-1:exon:23071;Parent=Msa0040100-mRNA-1 |
| chr1_1 | exon | 70092924 | 70093387 | 70092924 | ID=Msa0040100-mRNA-1:exon:23070;Parent=Msa0040100-mRNA-1 |
| chr1_1 | five_prime_UTR | 70093114 | 70093387 | 70093114 | ID=Msa0040100-mRNA-1:five_prime_utr;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70092924 | 70093113 | 70092924 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70092106 | 70092330 | 70092106 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70090808 | 70090871 | 70090808 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70090577 | 70090706 | 70090577 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70090336 | 70090480 | 70090336 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70089910 | 70090158 | 70089910 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70089745 | 70089829 | 70089745 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70088465 | 70088567 | 70088465 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70087759 | 70087884 | 70087759 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70087563 | 70087676 | 70087563 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70086513 | 70086631 | 70086513 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70086316 | 70086403 | 70086316 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70086126 | 70086218 | 70086126 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70085926 | 70086015 | 70085926 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70085660 | 70085779 | 70085660 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70085454 | 70085545 | 70085454 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70085148 | 70085205 | 70085148 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | CDS | 70084716 | 70084793 | 70084716 | ID=Msa0040100-mRNA-1:cds;Parent=Msa0040100-mRNA-1 |
| chr1_1 | three_prime_UTR | 70084106 | 70084715 | 70084106 | ID=Msa0040100-mRNA-1:three_prime_utr;Parent=Msa0040100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
